Cp4.1LG01g21540 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCCTCGATTACGCCTTTCACTCTGCAGATTGCTTGCCGGAAAATCTCAGGCTTCTACTTCTTCATCTTCGTGTATCGTTCGTCGAATTCTGGACTCTTCTCTGTTGCCAAATTCTGAGTTTCCTTACAAATTGCGACCAGATGATCTCCATTTTTCGTATGTAATGAGGCCGAATCGTCAGTTTGTAACTCTTCAGTGTTTGAGGAGGTACAGTGGTGGTTCGGGCAACTCGGAGCCGGAGTGTGATCAGATTAGAGAGGTGGACAGGATCAATCTCAAGTTTGCTGAAGCGAGAGAAGAGATAGAGTCGGCTATGGAGTCTAAAGAGACCGTTTATTTTGATGAAGAGGCCGAGTGTGCTCGGGATGCTGTGAAGGAAGTTTTAGACATGTACGAGGGGCTTCTTGCGAAATTGTGCGAGAACGAGAGGAAGGCGTTGCAGAGGTCCATGGGGCTTAAGATTGAGCAGTTGAAGGCTGAGCTTCAACAGCTTGACGAGTAA ATGAGCCCTCGATTACGCCTTTCACTCTGCAGATTGCTTGCCGGAAAATCTCAGGCTTCTACTTCTTCATCTTCGTGTATCGTTCGTCGAATTCTGGACTCTTCTCTGTTGCCAAATTCTGAGTTTCCTTACAAATTGCGACCAGATGATCTCCATTTTTCGTATGTAATGAGGCCGAATCGTCAGTTTGTAACTCTTCAGTGTTTGAGGAGGTACAGTGGTGGTTCGGGCAACTCGGAGCCGGAGTGTGATCAGATTAGAGAGGTGGACAGGATCAATCTCAAGTTTGCTGAAGCGAGAGAAGAGATAGAGTCGGCTATGGAGTCTAAAGAGACCGTTTATTTTGATGAAGAGGCCGAGTGTGCTCGGGATGCTGTGAAGGAAGTTTTAGACATGTACGAGGGGCTTCTTGCGAAATTGTGCGAGAACGAGAGGAAGGCGTTGCAGAGGTCCATGGGGCTTAAGATTGAGCAGTTGAAGGCTGAGCTTCAACAGCTTGACGAGTAA ATGAGCCCTCGATTACGCCTTTCACTCTGCAGATTGCTTGCCGGAAAATCTCAGGCTTCTACTTCTTCATCTTCGTGTATCGTTCGTCGAATTCTGGACTCTTCTCTGTTGCCAAATTCTGAGTTTCCTTACAAATTGCGACCAGATGATCTCCATTTTTCGTATGTAATGAGGCCGAATCGTCAGTTTGTAACTCTTCAGTGTTTGAGGAGGTACAGTGGTGGTTCGGGCAACTCGGAGCCGGAGTGTGATCAGATTAGAGAGGTGGACAGGATCAATCTCAAGTTTGCTGAAGCGAGAGAAGAGATAGAGTCGGCTATGGAGTCTAAAGAGACCGTTTATTTTGATGAAGAGGCCGAGTGTGCTCGGGATGCTGTGAAGGAAGTTTTAGACATGTACGAGGGGCTTCTTGCGAAATTGTGCGAGAACGAGAGGAAGGCGTTGCAGAGGTCCATGGGGCTTAAGATTGAGCAGTTGAAGGCTGAGCTTCAACAGCTTGACGAGTAA MSPRLRLSLCRLLAGKSQASTSSSSCIVRRILDSSLLPNSEFPYKLRPDDLHFSYVMRPNRQFVTLQCLRRYSGGSGNSEPECDQIREVDRINLKFAEAREEIESAMESKETVYFDEEAECARDAVKEVLDMYEGLLAKLCENERKALQRSMGLKIEQLKAELQQLDE
BLAST of Cp4.1LG01g21540 vs. TrEMBL
Match: A0A0A0KEB4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G052810 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 1.6e-52 Identity = 122/168 (72.62%), Postives = 133/168 (79.17%), Query Frame = 1
BLAST of Cp4.1LG01g21540 vs. TrEMBL
Match: A0A0S2GL25_POPTO (Uncharacterized protein OS=Populus tomentosa PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.2e-31 Identity = 99/179 (55.31%), Postives = 121/179 (67.60%), Query Frame = 1
BLAST of Cp4.1LG01g21540 vs. TrEMBL
Match: B9H7X4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s22000g PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 6.7e-30 Identity = 99/184 (53.80%), Postives = 123/184 (66.85%), Query Frame = 1
BLAST of Cp4.1LG01g21540 vs. TrEMBL
Match: B9SM69_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0296450 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 8.8e-30 Identity = 87/141 (61.70%), Postives = 100/141 (70.92%), Query Frame = 1
BLAST of Cp4.1LG01g21540 vs. TrEMBL
Match: M5VGY7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019583mg PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.5e-29 Identity = 81/131 (61.83%), Postives = 97/131 (74.05%), Query Frame = 1
BLAST of Cp4.1LG01g21540 vs. TAIR10
Match: AT1G71730.1 (AT1G71730.1 unknown protein) HSP 1 Score: 131.3 bits (329), Expect = 5.4e-31 Identity = 73/110 (66.36%), Postives = 87/110 (79.09%), Query Frame = 1
BLAST of Cp4.1LG01g21540 vs. NCBI nr
Match: gi|659113726|ref|XP_008456723.1| (PREDICTED: uncharacterized protein LOC103496582 [Cucumis melo]) HSP 1 Score: 217.6 bits (553), Expect = 1.6e-53 Identity = 124/168 (73.81%), Postives = 133/168 (79.17%), Query Frame = 1
BLAST of Cp4.1LG01g21540 vs. NCBI nr
Match: gi|449446379|ref|XP_004140949.1| (PREDICTED: uncharacterized protein LOC101219561 [Cucumis sativus]) HSP 1 Score: 213.8 bits (543), Expect = 2.4e-52 Identity = 122/168 (72.62%), Postives = 133/168 (79.17%), Query Frame = 1
BLAST of Cp4.1LG01g21540 vs. NCBI nr
Match: gi|952025388|gb|ALN96987.1| (hypothetical protein [Populus tomentosa]) HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31 Identity = 99/179 (55.31%), Postives = 121/179 (67.60%), Query Frame = 1
BLAST of Cp4.1LG01g21540 vs. NCBI nr
Match: gi|694413817|ref|XP_009335156.1| (PREDICTED: uncharacterized protein LOC103927906 [Pyrus x bretschneideri]) HSP 1 Score: 142.9 bits (359), Expect = 5.1e-31 Identity = 95/175 (54.29%), Postives = 119/175 (68.00%), Query Frame = 1
BLAST of Cp4.1LG01g21540 vs. NCBI nr
Match: gi|1009137936|ref|XP_015886320.1| (PREDICTED: uncharacterized protein LOC107421573 [Ziziphus jujuba]) HSP 1 Score: 142.9 bits (359), Expect = 5.1e-31 Identity = 91/151 (60.26%), Postives = 108/151 (71.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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