Cp4.1LG01g19370 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g19370
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMitochondrial intermembrane space import and assembly protein 40
LocationCp4.1LG01 : 16495825 .. 16499703 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCATTTTTCTTCGGTCCGCCTTTTCAGAGCTTATACGGTTTCCAACTTGAGTTGTGGACTTGAGAGAAGGATGGGTCAAACGGAGAGCGTAGCAGCGGCATCGTCTCCGAACGATCTACCACAAAGCCGGAATCCGTCTCCAAGTCCTGTCTCCGGTTCCTCTTCCGAATCTCCCTCCATGGATTCTCTAATTGCAGGTTCGTCGTCTTCTTACTGAGTTCTTCTTGTCTTTTTGTTCAGTTCGTATTCCTAGTGTCTATAAAAATGTATCTGTAGGCTAACGAAGCGATTTTTTTCATGTGAGAACGAATCGTGTTCGAGAAATTTAAATTTTGAGCGCTAAAAGATCTATGGAGTATCATGAATTTTGCTGAGTTGATTTTCTGTTCGTTTTATTGATTTTTTTCTTTCCTTCGTAGCATGTTTTAACTACATTCAGTTCTTGGAACGTTGCCGTGTTTGTATTGGAAGATTAAATAAGGTTTTCTAAATGAAACTGAGGTTTCTGGTAGATTGAGACTAAGCATTGAGTTGAAGAGAGCTTGTTGGAACATGCGGGAGGGTTACAGAATACATGAGCGTGTACTGGCAATACTTCACAAATGAAGAGTCACTTACTATCCAAATATGTGAAATACTAAGCTGACAGCACACAACTTAAAGTGGCCTATAGGCTAGAGGTAGGAGAGTTAATTCAATTTCAACAGGACAGCGATGCTTTAGTTCAGCTCTCTCATTTTGGAAAGAGATATAGGAGGGATGACAAGATAATCTAACGTGGATTCCTTGTTCTTCAGCACTTTAAACGAGTGGTAACTCTCGTCCACCATCAAATAGAGGACTAAGATTTTTGTTTCATGCTTGGTTTCAATAGGAAGTTTGAATTGTTTGAAACGAAGGATAACCTCTTTGTTCATTTTTATAAATTAACGTGGGGAAGAGAAGATTGTAGATATCCCATGACTTGCAAAACAATTTCAGCAGATTTAATTGTTCAACCACCTGTGAAGAAGTCATCAACTTCCATTTAGTAGTCGGTATTTTTTTTTTATTCTGTGAATAAGGAAATTTCATGGGTCTGTCTGTCGGCATTAGTGTATGAGGGGATAAACACAATGGACAACACTTGCTAGTGTCTTGCTGCTGAAGGTGTTCTTCAGGCTTCTAATCTGTAGCTTCTAAGTATTGGAGGGCCAAATTTGTCACGGATGAAAGTTGTATCAATCTAATTTGTGAGAGGTTACTTAAATACGTAGACCAGACTTCTTAGAGGAGTGCATCCAATCGAAACTTTTCCAGTGAAAACTTAACCTGATTGCACCATGCTCAACTGCATGTGGTTTATCTTATAGTTCTTCATTGATGGGGAATTTTTTTTAGCAAAATGCTAAGCAATTGTTGCAGCCATGCGGTTTTCTGTAGACTAACAAGTGAGATCGTGAGGTATTATTCAGGTAAGGGAGGAAACTATAGGGTTCATAAGAGGCAAAACTGAAAGTGCCTATGAAAAGAAAACCACAAGCTACGACACGTCGGTTGTGAAATACTAAGCTGGCATCACAAGAGATAACCGAAAAAATTGAATGATACTGCCTTTAAATCAGAACCAGAAAAATATTATTTGTCTAGTGCGCTTCAACAATTCTTTGTTTTAAATTTATTAGGTTTAAATACAGATGAAATGAAATATTATTTGCAATTCCTGTTGTACTCTACCCGTTTGGTGTTAGATTTGAGAACATGTTTGATAATCAACAACGTTGTTGTCATTCGTGCAGAAGCTGCAGCTTATGGCAATGAAGCAAATGAGGTTTGTCCACTCTAAAGATCTAAGTTTTCTTTTGAAGTTGGAATTGCCAACAAAGAAGTTGACCTATGCTTCTTTCAGTCTCTTGAGGCCAAAGCTAACAGAGCGTTAGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCATGTGGGGTCCAATTTTCTGATGCTTTTCTCTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGTAAGGAAAAAGATGGAACCACCCCATCCACTAACTTTTAAGTTACATTTTCAATCGTTATCCCTTAATTGTTGAGTCAATTTGTTCTCTATACGTTTAAAGTTTCATTGTGGTTCATACTTTTGCATTAGAACTTACCAAATGTCTTTGACGGTAGTGAGAGATAATTGGAATTCAAAATAGCAATTAGTTTGTACATTTAAGTTATTTAGAGTATGTTTTTGGTTGAAAAGTAGAAACAAGGGACTATGACTAATCTTGTCTAACTCTGCAACTAATGTGCTCCTTAGATTTCTTTTACTTTTTCCTTTAAATTTTATTTATTATTTTTATAATTTACTACATTAGGTTTATTTTCTGCTTTTTCACTAAAGAGGAATGTAACTATGACATCCCACATCGGTTGGGGAGGAGAACGAAACACCCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGGGGAAGCTCAAAAAGGACGATATCTGTTAGCGGTGGGCTTGGGCCATTACAAATGGTATCAGAGCCGACATTGGGCGATGTGCCAGCGAGGAGGTTGTTCCCCGAAGGTGGGTAGACACGAGGCGGTGTGCTAGTAAGAACCTTGGGCCCAGAAGGGGGGTGGATTTGGTGGGATCCCACATCGATTGGAGAAAGGAACGAGTGCCAGCGAGGACGCTGGACCTTGAAGGGGGGTGAATTGTGAGATCCCATATCGATTGGGGAGGAGAATGGAACACCCTTATAGCGTGGAGTGGATCCACGCTATAAGGGTGTTCCGTTCTCCTCCCTAGTATATACGCGTTTTAAAAACTTTGAGGGGAAGCCCGAAAGGGAATTAAGAAATCTGAATTAGTAAAAGTATAAGAATTAAAGTGAAACAGGCATGGGATTGAAAGTTTGTTTGGTATCTTCAAAGAAAATTGTGGCACATACTAACAGCTAAATTGTGATTGGTTTTTGTAAAGGGATCGGACTGTGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCTAATGCATTCTCAAAGGATGTATTGGATGAAGAAGAAGAAGAAGCAGAGGAAGAGGAAAGGGAAAAGCAGAAGGCTGAAGAGCCAACACAAGATTACAGAATCATTCCTCCTTCATGGTCTAGAGAACCTCAAGCTCCCAAGTCCAAGCTTTAGCTCAGACCATGAGCTTCCATTTTGCCTGCCCTGGTATGAATGATTATTATGATTATTTTATTGGGGTTGAGCCTACATTCTTGAAATAAATATGTTTTAAAATCTGCTAGTTACATTGTAGCAAATATTCCTGATTTTTAAAAGGTAACAGAGTAGACATGAACTTTACTCGAGTCTTAAACGACTTTACAAGGGTTCGAATACGCTAGAGCTCTTAAGGTTGTTGGGTTATGGTAAGAGTAGCTTAATTTCCAACGCTCTAATGATATGAATTTTCATTTTTCAAAATTTATCTAGATTTTAACTCGTTAGGTATTAGTAGTAATAATAATAATTATTATAAGTTGGTCGTTAGTCAATTGTGAGTAGCCAGGCGAGTAGCTGGAATTCACACAACTCGCTGGAATTCACGCAATCTCAACAACGAACGTCAACCGTTTCTTCTCCCATTCTCTTTAGAAATGCTCTCCCAATCTTCTCCCTCATTTAAATTTGGTTTTCAAGCATCACACCGAATTAGTTCTTTGTTGAAAAATCGTAAATTGTTGTCACAGATCAGAATCCTTCCCTCTTTCGTTTTCATTGAACTTGAGCTCGGTCTCCTCCGAACTTCTTCTAAAGTTCTACCCTGCGTGATCTACCGTGTTTTGGGAAGATTTACATTGTAA

mRNA sequence

CTCCATTTTTCTTCGGTCCGCCTTTTCAGAGCTTATACGGTTTCCAACTTGAGTTGTGGACTTGAGAGAAGGATGGGTCAAACGGAGAGCGTAGCAGCGGCATCGTCTCCGAACGATCTACCACAAAGCCGGAATCCGTCTCCAAGTCCTGTCTCCGGTTCCTCTTCCGAATCTCCCTCCATGGATTCTCTAATTGCAGAAGCTGCAGCTTATGGCAATGAAGCAAATGAGTCTCTTGAGGCCAAAGCTAACAGAGCGTTAGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCATGTGGGGTCCAATTTTCTGATGCTTTTCTCTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGGATCGGACTGTGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCTAATGCATTCTCAAAGGATGTATTGGATGAAGAAGAAGAAGAAGCAGAGGAAGAGGAAAGGGAAAAGCAGAAGGCTGAAGAGCCAACACAAGATTACAGAATCATTCCTCCTTCATGGTCTAGAGAACCTCAAGCTCCCAAATCAGAATCCTTCCCTCTTTCGTTTTCATTGAACTTGAGCTCGGTCTCCTCCGAACTTCTTCTAAAGTTCTACCCTGCGTGATCTACCGTGTTTTGGGAAGATTTACATTGTAA

Coding sequence (CDS)

CTCCATTTTTCTTCGGTCCGCCTTTTCAGAGCTTATACGGTTTCCAACTTGAGTTGTGGACTTGAGAGAAGGATGGGTCAAACGGAGAGCGTAGCAGCGGCATCGTCTCCGAACGATCTACCACAAAGCCGGAATCCGTCTCCAAGTCCTGTCTCCGGTTCCTCTTCCGAATCTCCCTCCATGGATTCTCTAATTGCAGAAGCTGCAGCTTATGGCAATGAAGCAAATGAGTCTCTTGAGGCCAAAGCTAACAGAGCGTTAGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCATGTGGGGTCCAATTTTCTGATGCTTTTCTCTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGGATCGGACTGTGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCTAATGCATTCTCAAAGGATGTATTGGATGAAGAAGAAGAAGAAGCAGAGGAAGAGGAAAGGGAAAAGCAGAAGGCTGAAGAGCCAACACAAGATTACAGAATCATTCCTCCTTCATGGTCTAGAGAACCTCAAGCTCCCAAATCAGAATCCTTCCCTCTTTCGTTTTCATTGAACTTGAGCTCGGTCTCCTCCGAACTTCTTCTAAAGTTCTACCCTGCGTGA

Protein sequence

LHFSSVRLFRAYTVSNLSCGLERRMGQTESVAAASSPNDLPQSRNPSPSPVSGSSSESPSMDSLIAEAAAYGNEANESLEAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLDEEEEEAEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSESFPLSFSLNLSSVSSELLLKFYPA
Homology
[Close]
BLAST of Cp4.1LG01g19370 vs. Swiss-Prot
Match: MIA40_USTMA (Mitochondrial intermembrane space import and assembly protein 40 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=MIA40 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.6e-11
Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 1 

Query: 88  ECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLD 147
           +CPC+  +  GPCG QF  AF CF  S AE KG DCV  F A+Q C + +P+ +  ++ D
Sbjct: 148 DCPCLGGMAHGPCGEQFKLAFSCFVYSEAEPKGIDCVDKFKAMQDCFREHPDVYKDEIED 207

Query: 148 EEEEEAEEEERE 160
           +E   A+ E+ E
Sbjct: 208 DEAANAQFEKEE 219

[Close]
BLAST of Cp4.1LG01g19370 vs. Swiss-Prot
Match: MIA40_CANAL (Mitochondrial intermembrane space import and assembly protein 40 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MIA40 PE=3 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-10
Identity = 29/69 (42.03%), Postives = 41/69 (59.42%), Query Frame = 1 

Query: 88  ECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLD 147
           +CPC+  +  GPCG +F +AF CF  S  E KG DC+  F  ++SC K  P  +  ++ D
Sbjct: 151 DCPCLGGMAHGPCGEEFKEAFSCFVFSETEPKGIDCIKKFENMRSCFKRYPEHYKDELYD 210

Query: 148 EEEEEAEEE 157
           + EEEA  E
Sbjct: 211 DGEEEASTE 219

[Close]
BLAST of Cp4.1LG01g19370 vs. Swiss-Prot
Match: MIA40_KLULA (Mitochondrial intermembrane space import and assembly protein 40 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=MIA40 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.8e-10
Identity = 40/113 (35.40%), Postives = 59/113 (52.21%), Query Frame = 1 

Query: 51  VSGSSSESPSMDSLIAEAAAYGNEANESLEAKANRALE----CPCIADLRKGPCGVQFSD 110
           +SG ++E  S  +  A A   G + NE   A      E    CPC+  +  GPCG +F  
Sbjct: 241 ISGGTAEQ-SATAAAAAAGVQGEKKNEQQTAYNPETGEINWDCPCLGGMAYGPCGEEFKS 300

Query: 111 AFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLDEEEEEAEEEERE 160
           AF CF  S A+ KG +CV  F  +Q+C +  P+ +++ + DEEE  AE  + E
Sbjct: 301 AFSCFVYSEADPKGINCVEKFSTMQNCFRKYPDYYAEQIKDEEEASAEASKIE 352

[Close]
BLAST of Cp4.1LG01g19370 vs. Swiss-Prot
Match: MIA40_DEBHA (Mitochondrial intermembrane space import and assembly protein 40 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=MIA40 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 38/121 (31.40%), Postives = 64/121 (52.89%), Query Frame = 1 

Query: 41  PQSRNPSPSPVSGSSSESPSMDSLIAEAAAYGNEANESLEAKANRALECPCIADLRKGPC 100
           P++R  +  P    S ES   +    E AAY  E  E          +CPC+  +  GPC
Sbjct: 109 PETRTETDKP----SEESQKDEENSYEGAAYNPETGEI-------NWDCPCLGGMAHGPC 168

Query: 101 GVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLDEEEEEAEEEEREK 160
           G +F +AF CF  S +E KG +C+  F ++++C + +P  + +++ D+EE+E   +  EK
Sbjct: 169 GEEFKEAFACFIYSESEPKGIECIKKFESMRNCFREHPEHYKEELYDDEEQEPLVDVNEK 218

Query: 161 Q 162
           +
Sbjct: 229 K 218

[Close]
BLAST of Cp4.1LG01g19370 vs. Swiss-Prot
Match: MIA40_DANRE (Mitochondrial intermembrane space import and assembly protein 40 OS=Danio rerio GN=chchd4 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 9.0e-09
Identity = 32/94 (34.04%), Postives = 47/94 (50.00%), Query Frame = 1 

Query: 51  VSGSSSESPSMDSLIAEAAAYGNEANESLEAKANRALECPCIADLRKGPCGVQFSDAFLC 110
           V+    E+PS   L+ +      E +  +    +    CPC+  +  GPCG QF DAF C
Sbjct: 15  VTKEDHEAPSNAELVEDDPNDPYEDHGLILPNGDINWNCPCLGGMASGPCGQQFKDAFSC 74

Query: 111 FFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 145
           F  S  E KGSDCV  F  +Q C++  P  + ++
Sbjct: 75  FHYSKEEIKGSDCVENFRGMQECMQKYPELYPQE 108

[Close]
BLAST of Cp4.1LG01g19370 vs. TrEMBL
Match: A9P964_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s26120g PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.4e-47
Identity = 105/163 (64.42%), Postives = 122/163 (74.85%), Query Frame = 1 

Query: 25  MGQTESVAAASSPNDLPQSRNPSPSPVSGSSSESPSMDSLIAEAAAYGNEANESLEAKAN 84
           MGQ +S  A   P+D      P         S SPSM+SL+AEA AYGN+ NESLEAKA 
Sbjct: 1   MGQAQSEVA---PSDTADQMEPH-------FSSSPSMESLLAEAVAYGNDENESLEAKAQ 60

Query: 85  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 144
           +ALECPCIADLR GPCGVQFS++FLCF KST+EEKGSDCVHPFVALQ+CIKANPNAFSKD
Sbjct: 61  KALECPCIADLRNGPCGVQFSESFLCFLKSTSEEKGSDCVHPFVALQNCIKANPNAFSKD 120

Query: 145 VLDEEEEEAEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSE 188
           +L         EE E++K EEP Q+Y+IIPP WSRE Q+PKS+
Sbjct: 121 IL---------EEAEEKKEEEPAQEYKIIPPIWSRESQSPKSK 144

[Close]
BLAST of Cp4.1LG01g19370 vs. TrEMBL
Match: W9RWY3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023064 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.4e-46
Identity = 104/168 (61.90%), Postives = 128/168 (76.19%), Query Frame = 1 

Query: 25  MGQTESVAAASSPND-LPQS----RNPSPSPVSGSSSESPSMDSLIAEAAAYGNEANESL 84
           MGQ +S  A+ + N+ +P       + S  P S SSS S SM+SLIAEAAAYGN+  ESL
Sbjct: 1   MGQVQSDVASEASNEHVPGGDRILSSSSAKPTSSSSSSSSSMESLIAEAAAYGNDGEESL 60

Query: 85  EAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPN 144
           EAKA +ALECPCIA LR G CGVQFS+AFLCF KSTAEEKGSDCVHPFVALQ+CIKANP+
Sbjct: 61  EAKAQKALECPCIAHLRSGSCGVQFSEAFLCFLKSTAEEKGSDCVHPFVALQNCIKANPD 120

Query: 145 AFSKDVLDEEEEEAEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSE 188
           AFSKD+L+++         E +K E+PTQ+Y+I PP WS+EP++PKS+
Sbjct: 121 AFSKDILEDD---------EVKKEEQPTQEYKIYPPEWSKEPRSPKSK 159

[Close]
BLAST of Cp4.1LG01g19370 vs. TrEMBL
Match: V4UC65_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016869mg PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.9e-43
Identity = 99/164 (60.37%), Postives = 124/164 (75.61%), Query Frame = 1 

Query: 25  MGQTESVAAASSPNDLPQSRNPSPSPVSGSSSE-SPSMDSLIAEAAAYGNEANESLEAKA 84
           MGQ +S A       + Q+     SP S  SS+ + S++SLIAEAAAYG++ NESL+ KA
Sbjct: 34  MGQVQSEA-------IDQTEGEQSSPSSPDSSQHAASIESLIAEAAAYGDDENESLDEKA 93

Query: 85  NRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 144
            +ALECPCIADLR GPCG QFS+AFLCF KST+EEKGSDCVHPFVALQ+CIKANP+AFSK
Sbjct: 94  QKALECPCIADLRSGPCGAQFSEAFLCFLKSTSEEKGSDCVHPFVALQNCIKANPSAFSK 153

Query: 145 DVLDEEEEEAEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSE 188
           D+L+E++E   E        EEP  +Y+IIPP WS+EP++PKS+
Sbjct: 154 DILEEDDEVKNE--------EEPPPEYKIIPPVWSKEPRSPKSK 182

[Close]
BLAST of Cp4.1LG01g19370 vs. TrEMBL
Match: A0A067GNM5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031983mg PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.6e-43
Identity = 99/164 (60.37%), Postives = 123/164 (75.00%), Query Frame = 1 

Query: 25  MGQTESVAAASSPNDLPQSRNPSPSPVSGSSSE-SPSMDSLIAEAAAYGNEANESLEAKA 84
           MGQ +S A       + Q+     SP S  SS+ + S++SLIAEAAAYG++ NESL+ KA
Sbjct: 1   MGQVQSEA-------IDQTEGEQSSPSSPDSSQRAASIESLIAEAAAYGDDENESLDEKA 60

Query: 85  NRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 144
            +ALECPCIADLR GPCG QFS+AFLCF KST+EEKGSDCVHPFVALQ+CIKANP+AFSK
Sbjct: 61  QKALECPCIADLRSGPCGAQFSEAFLCFLKSTSEEKGSDCVHPFVALQNCIKANPSAFSK 120

Query: 145 DVLDEEEEEAEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSE 188
           D+L+E+E + EEE         P  +Y+IIPP WS+EP+ PKS+
Sbjct: 121 DILEEDEVKNEEE---------PPPEYKIIPPVWSKEPRTPKSK 148

[Close]
BLAST of Cp4.1LG01g19370 vs. TrEMBL
Match: M0T014_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.1e-42
Identity = 100/163 (61.35%), Postives = 125/163 (76.69%), Query Frame = 1 

Query: 25  MGQTESVAAASSPNDLPQSRNPSPSPVSGSSSESPSMDSLIAEAAAYG-NEANESLEAKA 84
           MGQT+S AAA++     ++  P PS     S  + SM++L+AEA A G N++ ESLE KA
Sbjct: 1   MGQTQSDAAAAAAEAASKTEQPPPSIEPPPSPAASSMEALVAEAMATGDNDSEESLEEKA 60

Query: 85  NRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 144
            RAL+CPC+ADLRKGPCGVQFS+AF+CF KSTAEEKGSDCV+PFVALQ+CIKANP+AF+K
Sbjct: 61  QRALKCPCVADLRKGPCGVQFSEAFVCFIKSTAEEKGSDCVNPFVALQNCIKANPDAFTK 120

Query: 145 DVLDEEEEEAEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKS 187
           D+LDEE+E  EE+           QDY+IIPPSWSREP+ PK+
Sbjct: 121 DILDEEKEPEEEK----------VQDYKIIPPSWSREPR-PKN 152

[Close]
BLAST of Cp4.1LG01g19370 vs. TAIR10
Match: AT5G23395.1 (AT5G23395.1 Cox19-like CHCH family protein)

HSP 1 Score: 171.0 bits (432), Expect = 7.8e-43
Identity = 97/163 (59.51%), Postives = 117/163 (71.78%), Query Frame = 1 

Query: 25  MGQTES----VAAASSPNDLPQSRNPSPSPVSGSSSESPSMDSLIAEAAAYGNE--ANES 84
           MGQ +S    +   ++ N  P S N   SP     + SPSMDSL+AEAAAYG +   NES
Sbjct: 1   MGQAQSDENSIPTTTTTNTPPPSAN---SPRDSEDTSSPSMDSLLAEAAAYGEDDNENES 60

Query: 85  LEAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANP 144
           LEAKA RAL+CPCIADLR G CG QFS+AFLCF KSTAEEKGSDCV+PFVALQSCI ANP
Sbjct: 61  LEAKAQRALDCPCIADLRNGSCGSQFSEAFLCFLKSTAEEKGSDCVNPFVALQSCINANP 120

Query: 145 NAFSKDVLDEEEEEAEEEEREKQKAEEPTQDYRIIPPSWSREP 182
           +AFSK V        +E+E EK++ + P QD+RIIPP W+++P
Sbjct: 121 DAFSKSV------TGDEKETEKKEEQPPVQDHRIIPPLWAKDP 154

[Close]
BLAST of Cp4.1LG01g19370 vs. NCBI nr
Match: gi|659072357|ref|XP_008465292.1| (PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cucumis melo])

HSP 1 Score: 263.5 bits (672), Expect = 3.3e-67
Identity = 137/163 (84.05%), Postives = 145/163 (88.96%), Query Frame = 1 

Query: 25  MGQTESVAAASSPNDLPQSRNPSPSPVSGSSSESPSMDSLIAEAAAYGNEANESLEAKAN 84
           MGQ ESVAA S PNDLP S NPS SPVSGSSS  PSM+SLIAEA AYGNE NESL+AKAN
Sbjct: 1   MGQAESVAAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKAN 60

Query: 85  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 144
           RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD
Sbjct: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120

Query: 145 VLDEEEEEAEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSE 188
           +LD+     +EEE+EK K EEPTQDYR+IPPSWSREPQ PKS+
Sbjct: 121 ILDD-----DEEEKEKVKTEEPTQDYRVIPPSWSREPQIPKSK 158

[Close]
BLAST of Cp4.1LG01g19370 vs. NCBI nr
Match: gi|449464958|ref|XP_004150196.1| (PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cucumis sativus])

HSP 1 Score: 252.3 bits (643), Expect = 7.5e-64
Identity = 134/163 (82.21%), Postives = 143/163 (87.73%), Query Frame = 1 

Query: 25  MGQTESVAAASSPNDLPQSRNPSPSPVSGSSSESPSMDSLIAEAAAYGNEANESLEAKAN 84
           MGQ ESVAA S PNDLP S N S SPVSG     PSM+SLIAEA AYGNE NESL+AKAN
Sbjct: 1   MGQAESVAAVSPPNDLPPSLNQSASPVSG----PPSMESLIAEAEAYGNETNESLDAKAN 60

Query: 85  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 144
           RALECPCIADLRKG CG+QFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD
Sbjct: 61  RALECPCIADLRKGSCGIQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120

Query: 145 VLDEEEEEAEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSE 188
           VLDE+EEE +E E+EK K EEPTQDYR++PPSWSREPQ PKS+
Sbjct: 121 VLDEDEEE-KEMEKEKVKTEEPTQDYRVVPPSWSREPQIPKSK 158

[Close]
BLAST of Cp4.1LG01g19370 vs. NCBI nr
Match: gi|224113229|ref|XP_002316429.1| (hypothetical protein POPTR_0010s26120g [Populus trichocarpa])

HSP 1 Score: 196.4 bits (498), Expect = 4.9e-47
Identity = 105/163 (64.42%), Postives = 122/163 (74.85%), Query Frame = 1 

Query: 25  MGQTESVAAASSPNDLPQSRNPSPSPVSGSSSESPSMDSLIAEAAAYGNEANESLEAKAN 84
           MGQ +S  A   P+D      P         S SPSM+SL+AEA AYGN+ NESLEAKA 
Sbjct: 1   MGQAQSEVA---PSDTADQMEPH-------FSSSPSMESLLAEAVAYGNDENESLEAKAQ 60

Query: 85  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 144
           +ALECPCIADLR GPCGVQFS++FLCF KST+EEKGSDCVHPFVALQ+CIKANPNAFSKD
Sbjct: 61  KALECPCIADLRNGPCGVQFSESFLCFLKSTSEEKGSDCVHPFVALQNCIKANPNAFSKD 120

Query: 145 VLDEEEEEAEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSE 188
           +L         EE E++K EEP Q+Y+IIPP WSRE Q+PKS+
Sbjct: 121 IL---------EEAEEKKEEEPAQEYKIIPPIWSRESQSPKSK 144

[Close]
BLAST of Cp4.1LG01g19370 vs. NCBI nr
Match: gi|743906318|ref|XP_011046571.1| (PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Populus euphratica])

HSP 1 Score: 194.1 bits (492), Expect = 2.4e-46
Identity = 104/163 (63.80%), Postives = 121/163 (74.23%), Query Frame = 1 

Query: 25  MGQTESVAAASSPNDLPQSRNPSPSPVSGSSSESPSMDSLIAEAAAYGNEANESLEAKAN 84
           MGQ +S  A   P+D      P         S SPSM+SL+AEA AYGN+ NESLEAKA 
Sbjct: 1   MGQAQSEVA---PSDTADQMEPH-------FSSSPSMESLLAEAVAYGNDENESLEAKAQ 60

Query: 85  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 144
           +ALECPCIADLR GPCGVQFS++FLCF KST+EEKGSDCVHPFVALQ+CIKA PNAFSKD
Sbjct: 61  KALECPCIADLRNGPCGVQFSESFLCFLKSTSEEKGSDCVHPFVALQNCIKAKPNAFSKD 120

Query: 145 VLDEEEEEAEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSE 188
           +L         EE E++K EEP Q+Y+IIPP WSRE Q+PKS+
Sbjct: 121 IL---------EEAEEKKEEEPAQEYKIIPPIWSRESQSPKSK 144

[Close]
BLAST of Cp4.1LG01g19370 vs. NCBI nr
Match: gi|703126391|ref|XP_010103569.1| (hypothetical protein L484_023064 [Morus notabilis])

HSP 1 Score: 192.2 bits (487), Expect = 9.2e-46
Identity = 104/168 (61.90%), Postives = 128/168 (76.19%), Query Frame = 1 

Query: 25  MGQTESVAAASSPND-LPQS----RNPSPSPVSGSSSESPSMDSLIAEAAAYGNEANESL 84
           MGQ +S  A+ + N+ +P       + S  P S SSS S SM+SLIAEAAAYGN+  ESL
Sbjct: 1   MGQVQSDVASEASNEHVPGGDRILSSSSAKPTSSSSSSSSSMESLIAEAAAYGNDGEESL 60

Query: 85  EAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPN 144
           EAKA +ALECPCIA LR G CGVQFS+AFLCF KSTAEEKGSDCVHPFVALQ+CIKANP+
Sbjct: 61  EAKAQKALECPCIAHLRSGSCGVQFSEAFLCFLKSTAEEKGSDCVHPFVALQNCIKANPD 120

Query: 145 AFSKDVLDEEEEEAEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSE 188
           AFSKD+L+++         E +K E+PTQ+Y+I PP WS+EP++PKS+
Sbjct: 121 AFSKDILEDD---------EVKKEEQPTQEYKIYPPEWSKEPRSPKSK 159

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g19370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MIA40_USTMA5.6e-1143.06Mitochondrial intermembrane space import and assembly protein 40 OS=Ustilago may... [more]
MIA40_CANAL1.6e-1042.03Mitochondrial intermembrane space import and assembly protein 40 OS=Candida albi... [more]
MIA40_KLULA4.8e-1035.40Mitochondrial intermembrane space import and assembly protein 40 OS=Kluyveromyce... [more]
MIA40_DEBHA1.1e-0931.40Mitochondrial intermembrane space import and assembly protein 40 OS=Debaryomyces... [more]
MIA40_DANRE9.0e-0934.04Mitochondrial intermembrane space import and assembly protein 40 OS=Danio rerio ... [more]
BLAST of Cp4.1LG01g19370 vs. TrEMBL
Match NameE-valueIdentityDescription
A9P964_POPTR3.4e-4764.42Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s26120g PE=2 SV=1[more]
W9RWY3_9ROSA6.4e-4661.90Uncharacterized protein OS=Morus notabilis GN=L484_023064 PE=4 SV=1[more]
V4UC65_9ROSI3.9e-4360.37Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016869mg PE=4 SV=1[more]
A0A067GNM5_CITSI6.6e-4360.37Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031983mg PE=4 SV=1[more]
M0T014_MUSAM1.1e-4261.35Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
BLAST of Cp4.1LG01g19370 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G23395.17.8e-4359.51 Cox19-like CHCH family protein[more]
BLAST of Cp4.1LG01g19370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072357|ref|XP_008465292.1|3.3e-6784.05PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cuc... [more]
gi|449464958|ref|XP_004150196.1|7.5e-6482.21PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cuc... [more]
gi|224113229|ref|XP_002316429.1|4.9e-4764.42hypothetical protein POPTR_0010s26120g [Populus trichocarpa][more]
gi|743906318|ref|XP_011046571.1|2.4e-4663.80PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Pop... [more]
gi|703126391|ref|XP_010103569.1|9.2e-4661.90hypothetical protein L484_023064 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016482 cytosolic transport
biological_process GO:0072594 establishment of protein localization to organelle
biological_process GO:0006996 organelle organization
biological_process GO:0006605 protein targeting
biological_process GO:1902580 single-organism cellular localization
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0006625 protein targeting to peroxisome
biological_process GO:0045041 protein import into mitochondrial intermembrane space
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005777 peroxisome
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g19370.1Cp4.1LG01g19370.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 139..166
scor
NoneNo IPR availablePANTHERPTHR21622COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4coord: 57..198
score: 3.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g19370CmaCh04G022310Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g19370CmoCh04G023310Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g19370Cla009067Watermelon (97103) v1cpewmB441
Cp4.1LG01g19370ClCG01G007940Watermelon (Charleston Gray)cpewcgB370
Cp4.1LG01g19370Lsi09G008430Bottle gourd (USVL1VR-Ls)cpelsiB311
Cp4.1LG01g19370Bhi12G000992Wax gourdcpewgoB0490
Cp4.1LG01g19370Carg17763Silver-seed gourdcarcpeB0670
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g19370Wax gourdcpewgoB0491
Cp4.1LG01g19370Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG01g19370Cucurbita maxima (Rimu)cmacpeB318
Cp4.1LG01g19370Cucurbita moschata (Rifu)cmocpeB280
Cp4.1LG01g19370Wild cucumber (PI 183967)cpecpiB473
Cp4.1LG01g19370Cucumber (Chinese Long) v2cpecuB383
Cp4.1LG01g19370Melon (DHL92) v3.5.1cpemeB359
Cp4.1LG01g19370Cucumber (Gy14) v2cgybcpeB653
Cp4.1LG01g19370Melon (DHL92) v3.6.1cpemedB419
Cp4.1LG01g19370Silver-seed gourdcarcpeB1158
Cp4.1LG01g19370Cucumber (Chinese Long) v3cpecucB0549