ClCG01G007940 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G007940
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionIntermembrane space import and assembly protein 40, mitochondrial, putative
LocationCG_Chr01 : 9090154 .. 9096268 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTATTAACCTTCTATTACAACGACCGCCCACTTTTCTACCGGTTCCAATTTGAGTTCGGAGAAGGATGGGTCAAGCTGAAAGCGTCGCCGCCGTATCGTCTCCGAACGATCTACCTCAAAGCCGGAATTCATCTGCAAGTCCCGTCTCCGGTCCTCCCTCCATGGAGTCTCTAATTGCAGGTCCCCTGCCTTCTGTTTAATCTTTCCGTGTCTTTTTGTTCTGTTCATATTCTACGTATCTGTAAAAATGTTTCTGTTAGTCAATGAAGCGATCCTTTTCATATAAGAATGATTCATGTTCAAGAAATTGAAATTTCGGGTGCTAAAATGTCCAAGGACTATCGTGAATTTCGTTAAATTTATTTTCTGTTCGTAGTATCGGTTGTTATTCTTCATAACATGCTCAGACAACAGGCGAAATTAGTCTGCAGTATGCCCTGCTTCTGTGAAGGGATTATATTCATCATTTACGGCCTGGTTTATTCATGGTAATAGGATCCATGATACTTTTCAAGGTTATAAACAAGTGATTGCATGGGTGACTATGGAGAGAGGCTAGTTGCTGAAGAAGAAGGATTCTGGGAAGTGGGTTAGCTAGGGGACTAGGAGTTGTCGCTCGAATTGGAGAGGGGAGCCGAGAAAGGATAGAATTAGAGCGGGTATTGGTAAGTTTCTACAAAGACATACCCAAAAGTTTGACATTGGAGCATAGTAGATTGATTGTGTTTGAGGTAAAGGTTGCTGTAGCAAAGGTTTTCAGAAAAGAACAATTGGGAAGAGAGTTGTGGAAAAGTTAAAAAAGGAGTTTTGTCTTAAGAACTGGTATGTGGAGCCTATTTATCAAATAAACTGTAGTATAAAATGCTTCGCCCAATTAAAGTGGCATACAGGCTTGAGCTAGGAGAGTCAATCCAGTTTCAACGAGACAGTGATGTTTTATCTCAGCTCTCATTTTAATAGTGGGATTGAAGAGACAAGATAATCTTGCTGGATTCCTTGTTCTTCTGCTGGTCAGCAAATTAAAGCAGTGGCAACTCTTGTCTACCAACTAGCATTTGTCTTCTTCAGCACTTGATTGGATGCCAAGCAAGGACTCGATGCATCCGGCGCCTTATGCTTTTGTATCCTATGACTTAAAACAATGTCAGCTATGTTTTGTATCCTATGACTTAAAAACAATTTCAGCTGTCATTTAATTGGATGCCAAGCCAGGACTTGATGCATCTGTCGCCTTATGTTTTGTATCCTATGACTTGAAAAACAATTTCAGCTGTCATTTAATTGTAAAACCACCCCCTGAAGATGTTAATTGGCTGCCATTTTGGAGTCACTATTTTATATTTTGATTTAGTAAGTTTCGTGGCCCTGTCTGTTGGTTGGCATTAGAGTGTGCGAGGGGGATAAACACAATGGACATCATCCATCAATTTCTTGCTTCTGCAAGATGTCCTTCAGGCTTCAAGTCTGTAGTTTATAAGAATTGGACGCCACTTTTGTTGTTACAGGATGTTGTAATGATCTAATTTGTGAGAGGTTACTGTATTATGTGGACCAGACTGCTTATAGGAGGCATCTAATTGAAACTTTTCCAGTGAAGACTTAACCTGAGTTGCACCATTCTTCAACTGCAAGTAGTTATTCTTTAGTTCTTCATTGACAGGGAATTTATTTGAGCGAACACTAGCGATTGTTGCTCAAATACCAACATAAAACTGAGGTTTTCTACAGACTAACCATTGAAGTCGTGAGATCTTATTCAGGTAAGGGGGTATATTACAGATTACATATGAGGCCAAACTGTAAATACCCCTGAAAAGAAAAGCAACAAACTACCACATGTATGAAATACTAAGCTGGCATCACAAAAGATAATTAGAAAAAACTGAATAATGCAGCCCTTTAATCAGAGAACAGATTGATATTATTTATCAAGTGTGCTTTAACAATTCTTTGTACACATAAAATGAAATATTATTTGCAATCCCCGTTGTACTAGTTCTCTTTAGTGTTAGATTTGAGGACATGTTTGATAATTAACAACTTTTTCATTCTTGCAGAAGCTGCAGCTTATGGTAATGAAACAAATGAGGTTTGTCCACTTTAAAGATTTAAGCTTCCTTTTGAAATTGGAATAGAAACCAAGAAGTTGACCCATGCTTCTTTCAGTCTCTTGATGCCAAAGCTAACAGAGCGTTAGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCATGCGGGGTCCAGTTTTCTGATGCTTTTCTTTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGTAAGGAAAAAGAACGAACCACCACATTTTATATAGCTTTTAAGGAAAAATAAGAAGTTATGGCAAAGCTTTTTGGTTAAATTATATTTTTCGATCCCTACCTGTAATTGTAGTCAATTTGGTCTCTGCATAGCTATAAATTTCATTATGATTCATACATTTTTTTGTTAGAACTTACCAAATGTCTTTGACATTAGTGAGAGATAAGGGATTCAACATAGCAAGTTATTTGTGAGTGGTATGGCATATCAGTTCCGTAATATGATATAGAAATTTGATACATTACATCTGTTGAAAAACATGAAACAGTGCTAGGTATTTAGGCTTTTTTGGTTGAAAAGTAGAATTCAGGGCTATTGCTAATCTTGTTTAACACTGCAACTAATTATGCTTAGATTTCTATTACATATTTTTTTAAAAAATTCAGCTACAAACATTTAGAGCATCTGATATCCTTGGTTTTTTTACCAAAGGGTAAACGAAGTCTGAATATAGCTAAATTGGTTTAAGCCATAGATCTTAGACCAAGAGGTTAGGTGTTTAATCCTCACAACTCCAAGTGTTATGTGAACTCAAAAACTAAAGAATAAGCGAAATTTGTAAAATGTTTTAAGAAGTAAATTGAAACAACTATTAAGTTATGAGGGTCCCCCCCCCCCCCCCCCCCCCCTCCAAATCTTTACAAAAATTGTTGTACAACTAACAGCTAAATTGTGATGTTTTCGAAAGGGATCGGACTGTGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCAAATGCATTCTCGAAGGATATCTTGGACGAAGATGAAGATGAAGAAGAAAAAGAAAGGGAAAAAGTAAAGGCTGAAGAGCCAACTCAAGATTACAGAGTCGTTCCTCCTTCATGGTCTAGAGAACCTCAAACTCCCAAGTCCAAGCTGTAACTCATATCATCAGCTTCCATTTTGTCTATCCTGGTATGATTGTTATGATTATTTATTGGGGATGTAGTTTACATTCTTATAATGAATAAGTTTGAGAATCTATTAGTTACATTTGTAGCAAATATTTCTGACTTTTCGATTTCTTCACCTAGTAGAACATTTTAAAATCAAGTCATAAAATATAAATTAAATATGAATTTATCAAACATGCTTTTATGAGTTTATGCAATACTAGGGATGCCGTGGATGTGGAAAGGTGACTCGAGAATCAAAAAAGCATATAGAGAGAGTATTTTGGTGGTGACCGAGATAGCTTTTAGCGACAAGTATGATGATTGGATTACAAAGACTCATAGTTAAAAAATTTGAAGGCACATAGATTTTTTTGGATTATGAAACATGCCTCGACTTCTCTAAGGCATAAAAATATCCTTTGACCTAAGTAGTCTTTACTCAGGCTAATCTACGCCAGAAATTTCTTTCTTGAATGTAAAAAAGATTTTGACTGCATTGGATATTATTGCCTCTTTTAATCTTTGGTTTTGTGATTCTACAATATTTGTTGAGGGCCAAAACTTCACGTGGCTGTTTGGTTGAGGAAAAATGTGATAATGATCTGAAATGTAGAAACAGCTATTCCATTCCAATAACATACTCTGCCAAAAAAATTTTACATGTAGAAGACAATTGGATATATCTTTTTCTCCCTTCCAAACGTGCCCTTGAGTGAGTAAAAGATCAAACTAATTTCCAAAAGAACAAAAAATGATTTGTAAACTACGTTGGCCACTGCAAACTTTTCTTGAAGGCTTGTTATTGATGGGTCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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mRNA sequence

CTATTAACCTTCTATTACAACGACCGCCCACTTTTCTACCGGTTCCAATTTGAGTTCGGAGAAGGATGGGTCAAGCTGAAAGCGTCGCCGCCGTATCGTCTCCGAACGATCTACCTCAAAGCCGGAATTCATCTGCAAGTCCCGTCTCCGGTCCTCCCTCCATGGAGTCTCTAATTGCAGAAGCTGCAGCTTATGGTAATGAAACAAATGAGTCTCTTGATGCCAAAGCTAACAGAGCGTTAGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCATGCGGGGTCCAGTTTTCTGATGCTTTTCTTTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGGATCGGACTGTGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCAAATGCATTCTCGAAGGATATCTTGGACGAAGATGAAGATGAAGAAGAAAAAGAAAGGGAAAAAGTAAAGGCTGAAGAGCCAACTCAAGATTACAGAGTCGTTCCTCCTTCATGGTCTAGAGAACCTCAAACTCCCAAGTCCAAGCTGTAACTCATATCATCAGCTTCCATTTTGTCTATCCTGGTTTCAAGAATCAATTTGTGCAATAAGTTGATCCAAGACAGTAGGATCTGCAAGTGTTGAGGTATCTCCAATCTCATCCAACTGCTTGGATGCAATTTTTCTCAAAACTCGTCTCAATATCTTTCCACTCCTTGTTTTTGGCAGCTCATTTGCCCAATGTATTTTATCAGGTGCTGCAAATGCTCCAATCTGAAAGTG

Coding sequence (CDS)

ATGGGTCAAGCTGAAAGCGTCGCCGCCGTATCGTCTCCGAACGATCTACCTCAAAGCCGGAATTCATCTGCAAGTCCCGTCTCCGGTCCTCCCTCCATGGAGTCTCTAATTGCAGAAGCTGCAGCTTATGGTAATGAAACAAATGAGTCTCTTGATGCCAAAGCTAACAGAGCGTTAGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCATGCGGGGTCCAGTTTTCTGATGCTTTTCTTTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGGATCGGACTGTGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCAAATGCATTCTCGAAGGATATCTTGGACGAAGATGAAGATGAAGAAGAAAAAGAAAGGGAAAAAGTAAAGGCTGAAGAGCCAACTCAAGATTACAGAGTCGTTCCTCCTTCATGGTCTAGAGAACCTCAAACTCCCAAGTCCAAGCTGTAA

Protein sequence

MGQAESVAAVSSPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL
Homology
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BLAST of ClCG01G007940 vs. Swiss-Prot
Match: MIA40_DEBHA (Mitochondrial intermembrane space import and assembly protein 40 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=MIA40 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.1e-14
Identity = 39/144 (27.08%), Postives = 68/144 (47.22%), Query Frame = 1 

Query: 1   MGQAESVAAVSSPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALE 60
           +G+A+    V +    P++R  +  P       E    E AAY  ET E          +
Sbjct: 93  IGKADVKTKVPAEEANPETRTETDKPSEESQKDEENSYEGAAYNPETGEI-------NWD 152

Query: 61  CPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDE 120
           CPC+  +  GPCG +F +AF CF  S +E KG +C+  F ++++C + +P  + +++ D+
Sbjct: 153 CPCLGGMAHGPCGEEFKEAFACFIYSESEPKGIECIKKFESMRNCFREHPEHYKEELYDD 212

Query: 121 DEDEEEKEREKVKAEEPTQDYRVV 145
           +E E   +  + K +   Q    +
Sbjct: 213 EEQEPLVDVNEKKGDASEQSAETI 229

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BLAST of ClCG01G007940 vs. Swiss-Prot
Match: MIA40_USTMA (Mitochondrial intermembrane space import and assembly protein 40 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=MIA40 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 7.7e-13
Identity = 37/102 (36.27%), Postives = 52/102 (50.98%), Query Frame = 1 

Query: 34  ESLIAEAAAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGS 93
           E    + +AY  ET E          +CPC+  +  GPCG QF  AF CF  S AE KG 
Sbjct: 129 EEQTGQQSAYDPETGEI-------NWDCPCLGGMAHGPCGEQFKLAFSCFVYSEAEPKGI 188

Query: 94  DCVHPFVALQSCIKANPNAFSKDILDEDEDEEEKEREKVKAE 136
           DCV  F A+Q C + +P+ +  +I D++    + E+E+  A+
Sbjct: 189 DCVDKFKAMQDCFREHPDVYKDEIEDDEAANAQFEKEEANAK 223

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BLAST of ClCG01G007940 vs. Swiss-Prot
Match: MIA40_KLULA (Mitochondrial intermembrane space import and assembly protein 40 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=MIA40 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-12
Identity = 40/135 (29.63%), Postives = 65/135 (48.15%), Query Frame = 1 

Query: 3   QAESVAAVSSPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALECP 62
           +AE  A + S +     ++++A+  +     E    +  AY  ET E          +CP
Sbjct: 231 EAEEQAEIRSISGGTAEQSATAAAAAAGVQGEKKNEQQTAYNPETGEI-------NWDCP 290

Query: 63  CIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDEDE 122
           C+  +  GPCG +F  AF CF  S A+ KG +CV  F  +Q+C +  P+ +++ I DE+E
Sbjct: 291 CLGGMAYGPCGEEFKSAFSCFVYSEADPKGINCVEKFSTMQNCFRKYPDYYAEQIKDEEE 350

Query: 123 DEEEKEREKVKAEEP 138
              E  + + K+  P
Sbjct: 351 ASAEASKIEDKSTTP 358

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BLAST of ClCG01G007940 vs. Swiss-Prot
Match: MIA40_YEAST (Mitochondrial intermembrane space import and assembly protein 40 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MIA40 PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-12
Identity = 40/133 (30.08%), Postives = 58/133 (43.61%), Query Frame = 1 

Query: 11  SSPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKA-------NRALECPC 70
           SS   +  S NS+    S     E L  +       T E +  +            +CPC
Sbjct: 239 SSKKTVSDSENSAKQSESSDEEKEELRKQEEKQMGPTEEEVQHEGAYNPDTGEINWDCPC 298

Query: 71  IADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDEDED 130
           +  +  GPCG +F  AF CF  S AE KG DCV  F  +Q C +  P  +++ + +  +D
Sbjct: 299 LGGMAHGPCGEEFKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFRKYPEHYAEQLKETSDD 358

Query: 131 EEEKEREKVKAEE 137
           EE +++ KV   E
Sbjct: 359 EEPQDKVKVNTIE 371

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BLAST of ClCG01G007940 vs. Swiss-Prot
Match: MIA40_ASHGO (Mitochondrial intermembrane space import and assembly protein 40 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MIA40 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12
Identity = 41/136 (30.15%), Postives = 62/136 (45.59%), Query Frame = 1 

Query: 3   QAESVAAVSSPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALECP 62
           QAE   AV +       + + A+      + E+   +  AY  +T E          +CP
Sbjct: 136 QAEQAPAVETEQAAEAEQAAEAAAEDKASAGEAAQGQQGAYNPDTGEI-------NWDCP 195

Query: 63  CIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDEDE 122
           C+  +  GPCG +F  AF CF  S AE KG DCV  F  +Q C + +P  +++ +  E++
Sbjct: 196 CLGGMAHGPCGEEFKAAFACFVYSEAEPKGIDCVEKFQVMQDCFRQHPEHYAEQLESEEQ 255

Query: 123 --DEEEKEREKVKAEE 137
              E E   E  K++E
Sbjct: 256 AVRETEAAAESAKSDE 264

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BLAST of ClCG01G007940 vs. TrEMBL
Match: A9P964_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s26120g PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 7.7e-52
Identity = 105/159 (66.04%), Postives = 125/159 (78.62%), Query Frame = 1 

Query: 1   MGQAESVAAVSSPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALE 60
           MGQA+S  A S   D  +   SS+      PSMESL+AEA AYGN+ NESL+AKA +ALE
Sbjct: 1   MGQAQSEVAPSDTADQMEPHFSSS------PSMESLLAEAVAYGNDENESLEAKAQKALE 60

Query: 61  CPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDE 120
           CPCIADLR GPCGVQFS++FLCF KST+EEKGSDCVHPFVALQ+CIKANPNAFSKDIL+E
Sbjct: 61  CPCIADLRNGPCGVQFSESFLCFLKSTSEEKGSDCVHPFVALQNCIKANPNAFSKDILEE 120

Query: 121 DEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL 160
            E+++E        EEP Q+Y+++PP WSRE Q+PKSKL
Sbjct: 121 AEEKKE--------EEPAQEYKIIPPIWSRESQSPKSKL 145

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BLAST of ClCG01G007940 vs. TrEMBL
Match: A0A067GNM5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031983mg PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.1e-49
Identity = 102/159 (64.15%), Postives = 121/159 (76.10%), Query Frame = 1 

Query: 1   MGQAESVAAVSSPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALE 60
           MGQ +S A   +  +  QS  SS        S+ESLIAEAAAYG++ NESLD KA +ALE
Sbjct: 1   MGQVQSEAIDQTEGE--QSSPSSPDSSQRAASIESLIAEAAAYGDDENESLDEKAQKALE 60

Query: 61  CPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDE 120
           CPCIADLR GPCG QFS+AFLCF KST+EEKGSDCVHPFVALQ+CIKANP+AFSKDIL+E
Sbjct: 61  CPCIADLRSGPCGAQFSEAFLCFLKSTSEEKGSDCVHPFVALQNCIKANPSAFSKDILEE 120

Query: 121 DEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL 160
           DE + E        EEP  +Y+++PP WS+EP+TPKSKL
Sbjct: 121 DEVKNE--------EEPPPEYKIIPPVWSKEPRTPKSKL 149

[Close]
BLAST of ClCG01G007940 vs. TrEMBL
Match: W9RWY3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023064 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.7e-49
Identity = 106/168 (63.10%), Postives = 128/168 (76.19%), Query Frame = 1 

Query: 1   MGQAES-VAAVSSPNDLPQS----RNSSASPVSGPP----SMESLIAEAAAYGNETNESL 60
           MGQ +S VA+ +S   +P       +SSA P S       SMESLIAEAAAYGN+  ESL
Sbjct: 1   MGQVQSDVASEASNEHVPGGDRILSSSSAKPTSSSSSSSSSMESLIAEAAAYGNDGEESL 60

Query: 61  DAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPN 120
           +AKA +ALECPCIA LR G CGVQFS+AFLCF KSTAEEKGSDCVHPFVALQ+CIKANP+
Sbjct: 61  EAKAQKALECPCIAHLRSGSCGVQFSEAFLCFLKSTAEEKGSDCVHPFVALQNCIKANPD 120

Query: 121 AFSKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL 160
           AFSKDIL++DE ++E        E+PTQ+Y++ PP WS+EP++PKSKL
Sbjct: 121 AFSKDILEDDEVKKE--------EQPTQEYKIYPPEWSKEPRSPKSKL 160

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BLAST of ClCG01G007940 vs. TrEMBL
Match: V4UC65_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016869mg PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.4e-48
Identity = 102/159 (64.15%), Postives = 122/159 (76.73%), Query Frame = 1 

Query: 1   MGQAESVAAVSSPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALE 60
           MGQ +S A   +  +  QS  SS        S+ESLIAEAAAYG++ NESLD KA +ALE
Sbjct: 34  MGQVQSEAIDQTEGE--QSSPSSPDSSQHAASIESLIAEAAAYGDDENESLDEKAQKALE 93

Query: 61  CPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDE 120
           CPCIADLR GPCG QFS+AFLCF KST+EEKGSDCVHPFVALQ+CIKANP+AFSKDIL+E
Sbjct: 94  CPCIADLRSGPCGAQFSEAFLCFLKSTSEEKGSDCVHPFVALQNCIKANPSAFSKDILEE 153

Query: 121 DEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL 160
           D DE + E      EEP  +Y+++PP WS+EP++PKSKL
Sbjct: 154 D-DEVKNE------EEPPPEYKIIPPVWSKEPRSPKSKL 183

[Close]
BLAST of ClCG01G007940 vs. TrEMBL
Match: A0A059BG71_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02613 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.4e-47
Identity = 104/164 (63.41%), Postives = 121/164 (73.78%), Query Frame = 1 

Query: 1   MGQAES--VAAVSSPNDLPQSRNS-SASPVSG--PPSMESLIAEAAAYGNETNESLDAKA 60
           MGQA+S   AA  +     QSR   SASP S     SM+SLIAEAAAY N+ NESLDAKA
Sbjct: 1   MGQAQSDVAAASEAATSDDQSRGGLSASPSSSGAASSMDSLIAEAAAYANDENESLDAKA 60

Query: 61  NRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120
            +ALECPCIADLR G CG QFS+AF+CF KSTAEEKGSDCVHPFVALQ+CIKANP AFSK
Sbjct: 61  QKALECPCIADLRSGSCGNQFSEAFVCFLKSTAEEKGSDCVHPFVALQACIKANPGAFSK 120

Query: 121 DILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL 160
           D+L+ D D+ + E      EEP Q+YR++PP+WS+E     SKL
Sbjct: 121 DVLEGDNDDVKIE------EEPKQEYRIIPPTWSKESHNANSKL 158

[Close]
BLAST of ClCG01G007940 vs. TAIR10
Match: AT5G23395.1 (AT5G23395.1 Cox19-like CHCH family protein)

HSP 1 Score: 180.3 bits (456), Expect = 9.6e-46
Identity = 96/167 (57.49%), Postives = 119/167 (71.26%), Query Frame = 1 

Query: 1   MGQAES----VAAVSSPNDLPQSRNSSA-SPVSGPPSMESLIAEAAAYGNETNE--SLDA 60
           MGQA+S    +   ++ N  P S NS   S  +  PSM+SL+AEAAAYG + NE  SL+A
Sbjct: 1   MGQAQSDENSIPTTTTTNTPPPSANSPRDSEDTSSPSMDSLLAEAAAYGEDDNENESLEA 60

Query: 61  KANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAF 120
           KA RAL+CPCIADLR G CG QFS+AFLCF KSTAEEKGSDCV+PFVALQSCI ANP+AF
Sbjct: 61  KAQRALDCPCIADLRNGSCGSQFSEAFLCFLKSTAEEKGSDCVNPFVALQSCINANPDAF 120

Query: 121 SKDILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSRE-PQTPKSKL 160
           SK +       +EKE EK + + P QD+R++PP W+++ P++  SKL
Sbjct: 121 SKSVTG-----DEKETEKKEEQPPVQDHRIIPPLWAKDPPRSGNSKL 162

[Close]
BLAST of ClCG01G007940 vs. NCBI nr
Match: gi|449464958|ref|XP_004150196.1| (PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 3.1e-78
Identity = 145/159 (91.19%), Postives = 150/159 (94.34%), Query Frame = 1 

Query: 1   MGQAESVAAVSSPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALE 60
           MGQAESVAAVS PNDLP S N SASPVSGPPSMESLIAEA AYGNETNESLDAKANRALE
Sbjct: 1   MGQAESVAAVSPPNDLPPSLNQSASPVSGPPSMESLIAEAEAYGNETNESLDAKANRALE 60

Query: 61  CPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDE 120
           CPCIADLRKG CG+QFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD+LDE
Sbjct: 61  CPCIADLRKGSCGIQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLDE 120

Query: 121 DEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL 160
           DE+E+E E+EKVK EEPTQDYRVVPPSWSREPQ PKSKL
Sbjct: 121 DEEEKEMEKEKVKTEEPTQDYRVVPPSWSREPQIPKSKL 159

[Close]
BLAST of ClCG01G007940 vs. NCBI nr
Match: gi|659072357|ref|XP_008465292.1| (PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cucumis melo])

HSP 1 Score: 286.2 bits (731), Expect = 3.5e-74
Identity = 144/163 (88.34%), Postives = 148/163 (90.80%), Query Frame = 1 

Query: 1   MGQAESVAAVSSPNDLPQSRNSSASPVSG----PPSMESLIAEAAAYGNETNESLDAKAN 60
           MGQAESVAAVS PNDLP S N SASPVSG    PPSMESLIAEA AYGNETNESLDAKAN
Sbjct: 1   MGQAESVAAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKAN 60

Query: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120
           RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD
Sbjct: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120

Query: 121 ILDEDEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL 160
           ILD+DE+    E+EKVK EEPTQDYRV+PPSWSREPQ PKSKL
Sbjct: 121 ILDDDEE----EKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 159

[Close]
BLAST of ClCG01G007940 vs. NCBI nr
Match: gi|224113229|ref|XP_002316429.1| (hypothetical protein POPTR_0010s26120g [Populus trichocarpa])

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-51
Identity = 105/159 (66.04%), Postives = 125/159 (78.62%), Query Frame = 1 

Query: 1   MGQAESVAAVSSPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALE 60
           MGQA+S  A S   D  +   SS+      PSMESL+AEA AYGN+ NESL+AKA +ALE
Sbjct: 1   MGQAQSEVAPSDTADQMEPHFSSS------PSMESLLAEAVAYGNDENESLEAKAQKALE 60

Query: 61  CPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDE 120
           CPCIADLR GPCGVQFS++FLCF KST+EEKGSDCVHPFVALQ+CIKANPNAFSKDIL+E
Sbjct: 61  CPCIADLRNGPCGVQFSESFLCFLKSTSEEKGSDCVHPFVALQNCIKANPNAFSKDILEE 120

Query: 121 DEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL 160
            E+++E        EEP Q+Y+++PP WSRE Q+PKSKL
Sbjct: 121 AEEKKE--------EEPAQEYKIIPPIWSRESQSPKSKL 145

[Close]
BLAST of ClCG01G007940 vs. NCBI nr
Match: gi|743906318|ref|XP_011046571.1| (PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Populus euphratica])

HSP 1 Score: 209.1 bits (531), Expect = 5.5e-51
Identity = 104/159 (65.41%), Postives = 124/159 (77.99%), Query Frame = 1 

Query: 1   MGQAESVAAVSSPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALE 60
           MGQA+S  A S   D  +   SS+      PSMESL+AEA AYGN+ NESL+AKA +ALE
Sbjct: 1   MGQAQSEVAPSDTADQMEPHFSSS------PSMESLLAEAVAYGNDENESLEAKAQKALE 60

Query: 61  CPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDE 120
           CPCIADLR GPCGVQFS++FLCF KST+EEKGSDCVHPFVALQ+CIKA PNAFSKDIL+E
Sbjct: 61  CPCIADLRNGPCGVQFSESFLCFLKSTSEEKGSDCVHPFVALQNCIKAKPNAFSKDILEE 120

Query: 121 DEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL 160
            E+++E        EEP Q+Y+++PP WSRE Q+PKSKL
Sbjct: 121 AEEKKE--------EEPAQEYKIIPPIWSRESQSPKSKL 145

[Close]
BLAST of ClCG01G007940 vs. NCBI nr
Match: gi|568828719|ref|XP_006468687.1| (PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Citrus sinensis])

HSP 1 Score: 203.4 bits (516), Expect = 3.0e-49
Identity = 102/159 (64.15%), Postives = 121/159 (76.10%), Query Frame = 1 

Query: 1   MGQAESVAAVSSPNDLPQSRNSSASPVSGPPSMESLIAEAAAYGNETNESLDAKANRALE 60
           MGQ +S A   +  +  QS  SS        S+ESLIAEAAAYG++ NESLD KA +ALE
Sbjct: 1   MGQVQSEAIDQTEGE--QSSPSSPDSSQRAASIESLIAEAAAYGDDENESLDEKAQKALE 60

Query: 61  CPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDE 120
           CPCIADLR GPCG QFS+AFLCF KST+EEKGSDCVHPFVALQ+CIKANP+AFSKDIL+E
Sbjct: 61  CPCIADLRSGPCGAQFSEAFLCFLKSTSEEKGSDCVHPFVALQNCIKANPSAFSKDILEE 120

Query: 121 DEDEEEKEREKVKAEEPTQDYRVVPPSWSREPQTPKSKL 160
           DE + E        EEP  +Y+++PP WS+EP+TPKSKL
Sbjct: 121 DEVKNE--------EEPPPEYKIIPPVWSKEPRTPKSKL 149

The following BLAST results are available for this feature:
BLAST of ClCG01G007940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MIA40_DEBHA3.1e-1427.08Mitochondrial intermembrane space import and assembly protein 40 OS=Debaryomyces... [more]
MIA40_USTMA7.7e-1336.27Mitochondrial intermembrane space import and assembly protein 40 OS=Ustilago may... [more]
MIA40_KLULA1.0e-1229.63Mitochondrial intermembrane space import and assembly protein 40 OS=Kluyveromyce... [more]
MIA40_YEAST1.3e-1230.08Mitochondrial intermembrane space import and assembly protein 40 OS=Saccharomyce... [more]
MIA40_ASHGO1.7e-1230.15Mitochondrial intermembrane space import and assembly protein 40 OS=Ashbya gossy... [more]
BLAST of ClCG01G007940 vs. TrEMBL
Match NameE-valueIdentityDescription
A9P964_POPTR7.7e-5266.04Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s26120g PE=2 SV=1[more]
A0A067GNM5_CITSI2.1e-4964.15Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031983mg PE=4 SV=1[more]
W9RWY3_9ROSA4.7e-4963.10Uncharacterized protein OS=Morus notabilis GN=L484_023064 PE=4 SV=1[more]
V4UC65_9ROSI1.4e-4864.15Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016869mg PE=4 SV=1[more]
A0A059BG71_EUCGR4.4e-4763.41Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02613 PE=4 SV=1[more]
BLAST of ClCG01G007940 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G23395.19.6e-4657.49 Cox19-like CHCH family protein[more]
BLAST of ClCG01G007940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464958|ref|XP_004150196.1|3.1e-7891.19PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cuc... [more]
gi|659072357|ref|XP_008465292.1|3.5e-7488.34PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cuc... [more]
gi|224113229|ref|XP_002316429.1|1.1e-5166.04hypothetical protein POPTR_0010s26120g [Populus trichocarpa][more]
gi|743906318|ref|XP_011046571.1|5.5e-5165.41PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Pop... [more]
gi|568828719|ref|XP_006468687.1|3.0e-4964.15PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cit... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0006625 protein targeting to peroxisome
biological_process GO:0072594 establishment of protein localization to organelle
biological_process GO:0006996 organelle organization
biological_process GO:0006605 protein targeting
biological_process GO:0016482 cytosolic transport
biological_process GO:1902580 single-organism cellular localization
biological_process GO:0045041 protein import into mitochondrial intermembrane space
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005777 peroxisome
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G007940.1ClCG01G007940.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 115..135
scor
NoneNo IPR availablePANTHERPTHR21622COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4coord: 35..159
score: 4.7