CmoCh04G023310 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G023310
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMitochondrial intermembrane space import and assembly protein 40
LocationCmo_Chr04 : 17316742 .. 17320133 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTCAGAGCTTATACGGTTTCCAACTTGAGTTGTGGACTTGAGAGAAGGATGGGTCAAACGGAGAGCGTAGCAGCAGCGGCATCGTCTCCGAACGATCTACCACAAAGCCGGAATCCGTCTCCAAGTCCTGTCTCCGGTTCCTCTTCCGAATCTCCCTCCATGGAGTCTCTAATTGCAGGTTCGTCGTCTTCTGACTGAGTTCTTCTTGTCTTTTTGTTCAGTTCGTATTCCTAGTGTCTATAAAAATGTATCTGTAGGCTAACGAAGCGATCTTTTTTATGTAAGAATGAATTGTGTTCAAGAAATTTAAATTTCGAGCGCTAAAAGATCTAATGAGTATCATGAATTTTGCTGAGTTGATTTTCTGTTCGTTTTATTGATATTTTCTTTCCTTCGTAGCATGTTTTAACTACATTCAGTTCTTGGAACGTTGCCGTGTTTGTATTGGAAGATTAAATAAGGATTTCTAAATGAAACTGAGGTTTCTGGTAGTTTGAGACTAAGCATTGAGTTGAAGAGAGCTTGTTGGAACATGCGGGAGGGTTACAGAATACATGAGCTTGTACTGGCAATACTTCACAAATGAAGAGCCACTTACTATCCAAATATGTGAAATACTAAGCTGACAGCACACAACTTAAAGTGGCCTATAGGCTAGAGGTAGGAGAGTTAATTCAATTTCATCAAGACATCGATCTTTAGTTCAGCTCTCTCATTTTGGAAAGAGGTACAGGAGGGATGTCAAGATAATCTCACGTGGATTCCTTGTTCTTCAGCACTTTAAATGAGTGATAACTATCGTCCACCATCAAATAGAGACTAGGATTTTTGTTTCATGTTTGGTTTCAATAGGAAGTTTGAATTGTTTGAAACGAGGGATAGCCTCTTTGTTCATTTTTAAAATTAACGTGGGGAAGAGAAGATTGTAGATATCCCATGACTTGCAAAACAATTTCAGCACATTAATTGTACAACCACCTGTGAAGAAGTCATCAGCTTCCATTTAGTGGTCGGTATTTTATTTTTTTGATTCTGTGAATAAGGAAATTTCATGGGTCTGTCTGTCGGCACTAGTGTACGAGGGGATAAACACAATGGACAACACTCGTTAGTTTCTTGCTGCTGAAGGTGTTCTTCAGGCTTCTAATCTGTAGCTTCTAAGTATTGGAGGGCCAAATTTGTCACGGATGAAAGTTGTATCAATCTAATTTGTGAGAGGTTACTTAAATACGTAGACCAGACTTCTTAGAGGAGTGCATCCAATCGAAACTTTTCCAGTGAAAACTTAACCTGATTGCACCATGCACTGCATGTGGTTTATTTTATAGTTCTTCATTGATGGGGAATTTTTTTGAGCAAAATGCTAAGCAATTGTTGCAGCCATACTACCATAAAACTGCTTTTTTCTGTAGACTAACAAGTGAGCTCGTGAGTTATTATTCAGGTAAGGGAGAATACTATAGAGTTCATATGAGCCCAAACTGAAAGTGCCTATGAAAAGAAAACCACAAACTACCACACGTCGGTTGTGAAATACTAAGCTGGCATCACAAGAGATGATCGAAAAAATTGAATGATACTGTCATTTAATCTGAAACAGAACGATATTATTTGTCTAGTGTAATTTAACAATTCTTTGTTTTAAGTTTATTAGGTTTAACAGATAAAATGTAATATTATTTGCAATTCCTGTTGTACTATTTTTGTTTGGTGTTAGATTTGAGAACATGTTTGATCATCAACAACGTTGTTGTCATTCGTGCAGAAGCTGCAGCTTATGGCAATGAAGCAAATGAGGTTTGTCCACTCTAAAGATCTAAGTTTTCTTTTGAAGTTGGAATTGCCAACAAAGAAGTTGACCTATGCTTCTTTCAGTCTCTTGAGGCCAAAGCTAACAGAGCGTTAGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCATGTGGCGTCCAATTTTCTGATGCTTTTTTTTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGTAAGGCAAAAGATGGAACCACCCCATCCACTAACTTTTAAGTTACATTTTCAATCGTTATCCCTTAATTGTTGAGTCAATTTGTTCTCTATACGTTTGAAGTTTCATTGTGGTTCATACTTTTGCATTAGAACTTACCAAATGTCTTTGACGGTAGTGAGAGATAATTGGAATTCAAAATAGCAAATAGTTTGTACATTTAAGTTATTTAGAGTATGTTTTTGGTTGAAAAGTAGAAACAAGGGGCTATGACTAATCTTGTCTAACTCTGCAACTGATGTGCTCCTTAGATTAATATTACTTTTTCCTTTAAATTTTATTTATTATTTTTTATAATTTACTACATTAGGTTTATTTTCTGCTTTTCACTGAAGAGGAATGTAACTATGACATCCCACGTCGGTTGGGGAGAACGAAACACCCTTTATAAGGGTGTGGAAACTTCTCCCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAGCTCAAAAAAGACAATATCTGCTAGCGGTGGACTTGGGCCATTACAAATGGTATCAGAGCCGACACCGGGCGATGTGCCAGCGAGGAGGTTGTTCCCCGAATGTGGGTAGACACGAGGCAGTGTGCTAGTAAGGACCCTGTGCCCAGAAGGGGGGGTGGATTTGGTGGGGTCCCACATCGATTGGAGAAAGGAACGAGTGCCAGCGAGGACGCTGGACCTTGAAGGGGGGGGGGTGAATTGTGAGATCCCATATCGATTGGGGAAGAGAATGGAACACCCTTATAGTGTGGACCTATAAGGGTTTTCCGTTCTCCTCCCTAGCATACGCGTTTTAAAAACCTTGAGGGGAAGTCCGAAAGGAAATTAAGCTTTAATGAAATAGAAATCTGAATTAGTAAAAGTATAAGAATTAAAGTGAAACAGGCATGGGATTGAAAGTTTGTTTGGTATCTTCAAAGAAAATTGTGGCACATACTAACAGCTAAATTGTGATTGGTTTTTTTCGAAGGGATCGGACTGCGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCTAATGCATTCTCAAAGGATGTATTGGATGAAGAAGAAGAGGAAGAGGAAAGGGAAAAACAGAAGGCTGAAGAGCCAACAAAAGATTACAGAATCATTCCTCCTTCATGGTCTAGAGAACCTCAAGCTCCCAAGTCCAAGCTTTAGCTCAGACCATGAGCTTCCATTTTGTCTGCCCTGGTATGAATGATTATTATGATTATTTTATTGGGGATGAGCCTACATTCTTCAAATAAATATGTTTGAAAATCTGCTAGTTACATTGTAGCAAATATTCCTGACTTTTAAAAGGTAAACAGTACACATGAACTTTACTCGAGTCTTAAACGACTTTAATACGCGAG

mRNA sequence

CTTTTCAGAGCTTATACGGTTTCCAACTTGAGTTGTGGACTTGAGAGAAGGATGGGTCAAACGGAGAGCGTAGCAGCAGCGGCATCGTCTCCGAACGATCTACCACAAAGCCGGAATCCGTCTCCAAGTCCTGTCTCCGGTTCCTCTTCCGAATCTCCCTCCATGGAGTCTCTAATTGCAGAAGCTGCAGCTTATGGCAATGAAGCAAATGAGTCTCTTGAGGCCAAAGCTAACAGAGCGTTAGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCATGTGGCGTCCAATTTTCTGATGCTTTTTTTTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGGATCGGACTGCGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCTAATGCATTCTCAAAGGATGTATTGGATGAAGAAGAAGAGGAAGAGGAAAGGGAAAAACAGAAGGCTGAAGAGCCAACAAAAGATTACAGAATCATTCCTCCTTCATGGTCTAGAGAACCTCAAGCTCCCAAGTCCAAGCTTTAGCTCAGACCATGAGCTTCCATTTTGTCTGCCCTGGTATGAATGATTATTATGATTATTTTATTGGGGATGAGCCTACATTCTTCAAATAAATATGTTTGAAAATCTGCTAGTTACATTGTAGCAAATATTCCTGACTTTTAAAAGGTAAACAGTACACATGAACTTTACTCGAGTCTTAAACGACTTTAATACGCGAG

Coding sequence (CDS)

ATGGGTCAAACGGAGAGCGTAGCAGCAGCGGCATCGTCTCCGAACGATCTACCACAAAGCCGGAATCCGTCTCCAAGTCCTGTCTCCGGTTCCTCTTCCGAATCTCCCTCCATGGAGTCTCTAATTGCAGAAGCTGCAGCTTATGGCAATGAAGCAAATGAGTCTCTTGAGGCCAAAGCTAACAGAGCGTTAGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCATGTGGCGTCCAATTTTCTGATGCTTTTTTTTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGGATCGGACTGCGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCTAATGCATTCTCAAAGGATGTATTGGATGAAGAAGAAGAGGAAGAGGAAAGGGAAAAACAGAAGGCTGAAGAGCCAACAAAAGATTACAGAATCATTCCTCCTTCATGGTCTAGAGAACCTCAAGCTCCCAAGTCCAAGCTTTAG
Homology
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BLAST of CmoCh04G023310 vs. Swiss-Prot
Match: MIA40_USTMA (Mitochondrial intermembrane space import and assembly protein 40 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=MIA40 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 1 

Query: 65  ECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLD 124
           +CPC+  +  GPCG QF  AF CF  S AE KG DCV  F A+Q C + +P+ +  ++ D
Sbjct: 148 DCPCLGGMAHGPCGEQFKLAFSCFVYSEAEPKGIDCVDKFKAMQDCFREHPDVYKDEIED 207

Query: 125 EEEEEEEREKQKA 138
           +E    + EK++A
Sbjct: 208 DEAANAQFEKEEA 220

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BLAST of CmoCh04G023310 vs. Swiss-Prot
Match: MIA40_DEBHA (Mitochondrial intermembrane space import and assembly protein 40 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=MIA40 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.6e-11
Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 1 

Query: 18  PQSRNPSPSPVSGSSSESPSMESLIAEAAAYGNEANESLEAKANRALECPCIADLRKGPC 77
           P++R  +  P    S ES   E    E AAY  E  E          +CPC+  +  GPC
Sbjct: 109 PETRTETDKP----SEESQKDEENSYEGAAYNPETGEI-------NWDCPCLGGMAHGPC 168

Query: 78  GVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLDEEEEE 130
           G +F +AF CF  S +E KG +C+  F ++++C + +P  + +++ D+EE+E
Sbjct: 169 GEEFKEAFACFIYSESEPKGIECIKKFESMRNCFREHPEHYKEELYDDEEQE 209

[Close]
BLAST of CmoCh04G023310 vs. Swiss-Prot
Match: MIA40_CANAL (Mitochondrial intermembrane space import and assembly protein 40 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MIA40 PE=3 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 3.7e-10
Identity = 28/69 (40.58%), Postives = 40/69 (57.97%), Query Frame = 1 

Query: 65  ECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLD 124
           +CPC+  +  GPCG +F +AF CF  S  E KG DC+  F  ++SC K  P  +  ++ D
Sbjct: 151 DCPCLGGMAHGPCGEEFKEAFSCFVFSETEPKGIDCIKKFENMRSCFKRYPEHYKDELYD 210

Query: 125 EEEEEEERE 134
           + EEE   E
Sbjct: 211 DGEEEASTE 219

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BLAST of CmoCh04G023310 vs. Swiss-Prot
Match: MIA40_KLULA (Mitochondrial intermembrane space import and assembly protein 40 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=MIA40 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.2e-10
Identity = 40/118 (33.90%), Postives = 60/118 (50.85%), Query Frame = 1 

Query: 28  VSGSSSESPSMESLIAEAAAYGNEANESLEAKANRALE----CPCIADLRKGPCGVQFSD 87
           +SG ++E  S  +  A A   G + NE   A      E    CPC+  +  GPCG +F  
Sbjct: 241 ISGGTAEQ-SATAAAAAAGVQGEKKNEQQTAYNPETGEINWDCPCLGGMAYGPCGEEFKS 300

Query: 88  AFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLDEEEEEEEREKQKAEEPT 142
           AF CF  S A+ KG +CV  F  +Q+C +  P+ +++ + DEEE   E  K + +  T
Sbjct: 301 AFSCFVYSEADPKGINCVEKFSTMQNCFRKYPDYYAEQIKDEEEASAEASKIEDKSTT 357

[Close]
BLAST of CmoCh04G023310 vs. Swiss-Prot
Match: MIA40_SCHPO (Mitochondrial intermembrane space import and assembly protein 40 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mia40 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.4e-09
Identity = 32/96 (33.33%), Postives = 54/96 (56.25%), Query Frame = 1 

Query: 65  ECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLD 124
           +CPC+  +  GPCG +F  AF CF  S +E KG +C+  F A+Q+C + +P  + +D++ 
Sbjct: 198 DCPCLGGMAHGPCGEEFKAAFSCFVYSKSEPKGMECLDKFQAMQACFQKHPEIY-QDMVG 257

Query: 125 EEEEEEEREKQKAEEPTKDYRIIPPSWSREPQAPKS 161
           E EEE+    +K    + +        + +PQ+P S
Sbjct: 258 ESEEEDAETNEKPSTTSDE--------NNQPQSPPS 284

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BLAST of CmoCh04G023310 vs. TrEMBL
Match: A9P964_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s26120g PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-47
Identity = 106/162 (65.43%), Postives = 122/162 (75.31%), Query Frame = 1 

Query: 1   MGQTESVAAAASSPNDLPQSRNPSPSPVSGSSSESPSMESLIAEAAAYGNEANESLEAKA 60
           MGQ +S  A    P+D      P         S SPSMESL+AEA AYGN+ NESLEAKA
Sbjct: 1   MGQAQSEVA----PSDTADQMEPH-------FSSSPSMESLLAEAVAYGNDENESLEAKA 60

Query: 61  NRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120
            +ALECPCIADLR GPCGVQFS++F CF KST+EEKGSDCVHPFVALQ+CIKANPNAFSK
Sbjct: 61  QKALECPCIADLRNGPCGVQFSESFLCFLKSTSEEKGSDCVHPFVALQNCIKANPNAFSK 120

Query: 121 DVLDEEEEEEEREKQKAEEPTKDYRIIPPSWSREPQAPKSKL 163
           D+L      EE E++K EEP ++Y+IIPP WSRE Q+PKSKL
Sbjct: 121 DIL------EEAEEKKEEEPAQEYKIIPPIWSRESQSPKSKL 145

[Close]
BLAST of CmoCh04G023310 vs. TrEMBL
Match: W9RWY3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023064 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 7.6e-47
Identity = 105/166 (63.25%), Postives = 128/166 (77.11%), Query Frame = 1 

Query: 1   MGQTESVAAAASSPNDLPQS----RNPSPSPVSGSSSESPSMESLIAEAAAYGNEANESL 60
           MGQ +S  A+ +S   +P       + S  P S SSS S SMESLIAEAAAYGN+  ESL
Sbjct: 1   MGQVQSDVASEASNEHVPGGDRILSSSSAKPTSSSSSSSSSMESLIAEAAAYGNDGEESL 60

Query: 61  EAKANRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPN 120
           EAKA +ALECPCIA LR G CGVQFS+AF CF KSTAEEKGSDCVHPFVALQ+CIKANP+
Sbjct: 61  EAKAQKALECPCIAHLRSGSCGVQFSEAFLCFLKSTAEEKGSDCVHPFVALQNCIKANPD 120

Query: 121 AFSKDVLDEEEEEEEREKQKAEEPTKDYRIIPPSWSREPQAPKSKL 163
           AFSKD+L+++E ++E      E+PT++Y+I PP WS+EP++PKSKL
Sbjct: 121 AFSKDILEDDEVKKE------EQPTQEYKIYPPEWSKEPRSPKSKL 160

[Close]
BLAST of CmoCh04G023310 vs. TrEMBL
Match: A0A067GNM5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031983mg PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.6e-44
Identity = 101/163 (61.96%), Postives = 123/163 (75.46%), Query Frame = 1 

Query: 1   MGQTESVAAAASSPNDLPQSRNPSPSPVSGSSSE-SPSMESLIAEAAAYGNEANESLEAK 60
           MGQ +S A        + Q+     SP S  SS+ + S+ESLIAEAAAYG++ NESL+ K
Sbjct: 1   MGQVQSEA--------IDQTEGEQSSPSSPDSSQRAASIESLIAEAAAYGDDENESLDEK 60

Query: 61  ANRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFS 120
           A +ALECPCIADLR GPCG QFS+AF CF KST+EEKGSDCVHPFVALQ+CIKANP+AFS
Sbjct: 61  AQKALECPCIADLRSGPCGAQFSEAFLCFLKSTSEEKGSDCVHPFVALQNCIKANPSAFS 120

Query: 121 KDVLDEEEEEEEREKQKAEEPTKDYRIIPPSWSREPQAPKSKL 163
           KD+L+E+E + E      EEP  +Y+IIPP WS+EP+ PKSKL
Sbjct: 121 KDILEEDEVKNE------EEPPPEYKIIPPVWSKEPRTPKSKL 149

[Close]
BLAST of CmoCh04G023310 vs. TrEMBL
Match: V4UC65_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016869mg PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.0e-44
Identity = 100/163 (61.35%), Postives = 124/163 (76.07%), Query Frame = 1 

Query: 1   MGQTESVAAAASSPNDLPQSRNPSPSPVSGSSSE-SPSMESLIAEAAAYGNEANESLEAK 60
           MGQ +S A        + Q+     SP S  SS+ + S+ESLIAEAAAYG++ NESL+ K
Sbjct: 34  MGQVQSEA--------IDQTEGEQSSPSSPDSSQHAASIESLIAEAAAYGDDENESLDEK 93

Query: 61  ANRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFS 120
           A +ALECPCIADLR GPCG QFS+AF CF KST+EEKGSDCVHPFVALQ+CIKANP+AFS
Sbjct: 94  AQKALECPCIADLRSGPCGAQFSEAFLCFLKSTSEEKGSDCVHPFVALQNCIKANPSAFS 153

Query: 121 KDVLDEEEEEEEREKQKAEEPTKDYRIIPPSWSREPQAPKSKL 163
           KD+L+E++E +       EEP  +Y+IIPP WS+EP++PKSKL
Sbjct: 154 KDILEEDDEVKNE-----EEPPPEYKIIPPVWSKEPRSPKSKL 183

[Close]
BLAST of CmoCh04G023310 vs. TrEMBL
Match: M0T014_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 8.7e-43
Identity = 105/166 (63.25%), Postives = 124/166 (74.70%), Query Frame = 1 

Query: 1   MGQTESVAAAA-----SSPNDLPQSRNPSPSPVSGSSSESPSMESLIAEAAAYG-NEANE 60
           MGQT+S AAAA     S     P S  P PSP + S      ME+L+AEA A G N++ E
Sbjct: 1   MGQTQSDAAAAAAEAASKTEQPPPSIEPPPSPAASS------MEALVAEAMATGDNDSEE 60

Query: 61  SLEAKANRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKAN 120
           SLE KA RAL+CPC+ADLRKGPCGVQFS+AF CF KSTAEEKGSDCV+PFVALQ+CIKAN
Sbjct: 61  SLEEKAQRALKCPCVADLRKGPCGVQFSEAFVCFIKSTAEEKGSDCVNPFVALQNCIKAN 120

Query: 121 PNAFSKDVLDEEEEEEEREKQKAEEPTKDYRIIPPSWSREPQAPKS 161
           P+AF+KD+LDEE+E E       EE  +DY+IIPPSWSREP+ PK+
Sbjct: 121 PDAFTKDILDEEKEPE-------EEKVQDYKIIPPSWSREPR-PKN 152

[Close]
BLAST of CmoCh04G023310 vs. TAIR10
Match: AT5G23395.1 (AT5G23395.1 Cox19-like CHCH family protein)

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-41
Identity = 98/168 (58.33%), Postives = 121/168 (72.02%), Query Frame = 1 

Query: 1   MGQTES---VAAAASSPNDLPQSRNPSPSPVSGSSSESPSMESLIAEAAAYGNE--ANES 60
           MGQ +S        ++ N  P S N   SP     + SPSM+SL+AEAAAYG +   NES
Sbjct: 1   MGQAQSDENSIPTTTTTNTPPPSAN---SPRDSEDTSSPSMDSLLAEAAAYGEDDNENES 60

Query: 61  LEAKANRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANP 120
           LEAKA RAL+CPCIADLR G CG QFS+AF CF KSTAEEKGSDCV+PFVALQSCI ANP
Sbjct: 61  LEAKAQRALDCPCIADLRNGSCGSQFSEAFLCFLKSTAEEKGSDCVNPFVALQSCINANP 120

Query: 121 NAFSKDVLDEEEEEEEREKQKAEEPTKDYRIIPPSWSRE-PQAPKSKL 163
           +AFSK V  +E+E E++E+Q    P +D+RIIPP W+++ P++  SKL
Sbjct: 121 DAFSKSVTGDEKETEKKEEQP---PVQDHRIIPPLWAKDPPRSGNSKL 162

[Close]
BLAST of CmoCh04G023310 vs. NCBI nr
Match: gi|659072357|ref|XP_008465292.1| (PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cucumis melo])

HSP 1 Score: 260.8 bits (665), Expect = 1.6e-66
Identity = 138/162 (85.19%), Postives = 145/162 (89.51%), Query Frame = 1 

Query: 1   MGQTESVAAAASSPNDLPQSRNPSPSPVSGSSSESPSMESLIAEAAAYGNEANESLEAKA 60
           MGQ ESVAA  S PNDLP S NPS SPVSGSSS  PSMESLIAEA AYGNE NESL+AKA
Sbjct: 1   MGQAESVAAV-SPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKA 60

Query: 61  NRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120
           NRALECPCIADLRKGPCGVQFSDAF CFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK
Sbjct: 61  NRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120

Query: 121 DVLDEEEEEEEREKQKAEEPTKDYRIIPPSWSREPQAPKSKL 163
           D+LD  ++EEE+EK K EEPT+DYR+IPPSWSREPQ PKSKL
Sbjct: 121 DILD--DDEEEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 159

[Close]
BLAST of CmoCh04G023310 vs. NCBI nr
Match: gi|449464958|ref|XP_004150196.1| (PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 6.4e-63
Identity = 134/164 (81.71%), Postives = 142/164 (86.59%), Query Frame = 1 

Query: 1   MGQTESVAAAASSPNDLPQSRNPSPSPVSGSSSESPSMESLIAEAAAYGNEANESLEAKA 60
           MGQ ESVAA  S PNDLP S N S SPVSG     PSMESLIAEA AYGNE NESL+AKA
Sbjct: 1   MGQAESVAAV-SPPNDLPPSLNQSASPVSGP----PSMESLIAEAEAYGNETNESLDAKA 60

Query: 61  NRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120
           NRALECPCIADLRKG CG+QFSDAF CFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK
Sbjct: 61  NRALECPCIADLRKGSCGIQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120

Query: 121 DVLDEEEEEEEREKQ--KAEEPTKDYRIIPPSWSREPQAPKSKL 163
           DVLDE+EEE+E EK+  K EEPT+DYR++PPSWSREPQ PKSKL
Sbjct: 121 DVLDEDEEEKEMEKEKVKTEEPTQDYRVVPPSWSREPQIPKSKL 159

[Close]
BLAST of CmoCh04G023310 vs. NCBI nr
Match: gi|224113229|ref|XP_002316429.1| (hypothetical protein POPTR_0010s26120g [Populus trichocarpa])

HSP 1 Score: 197.6 bits (501), Expect = 1.7e-47
Identity = 106/162 (65.43%), Postives = 122/162 (75.31%), Query Frame = 1 

Query: 1   MGQTESVAAAASSPNDLPQSRNPSPSPVSGSSSESPSMESLIAEAAAYGNEANESLEAKA 60
           MGQ +S  A    P+D      P         S SPSMESL+AEA AYGN+ NESLEAKA
Sbjct: 1   MGQAQSEVA----PSDTADQMEPH-------FSSSPSMESLLAEAVAYGNDENESLEAKA 60

Query: 61  NRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120
            +ALECPCIADLR GPCGVQFS++F CF KST+EEKGSDCVHPFVALQ+CIKANPNAFSK
Sbjct: 61  QKALECPCIADLRNGPCGVQFSESFLCFLKSTSEEKGSDCVHPFVALQNCIKANPNAFSK 120

Query: 121 DVLDEEEEEEEREKQKAEEPTKDYRIIPPSWSREPQAPKSKL 163
           D+L      EE E++K EEP ++Y+IIPP WSRE Q+PKSKL
Sbjct: 121 DIL------EEAEEKKEEEPAQEYKIIPPIWSRESQSPKSKL 145

[Close]
BLAST of CmoCh04G023310 vs. NCBI nr
Match: gi|743906318|ref|XP_011046571.1| (PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Populus euphratica])

HSP 1 Score: 195.3 bits (495), Expect = 8.4e-47
Identity = 105/162 (64.81%), Postives = 121/162 (74.69%), Query Frame = 1 

Query: 1   MGQTESVAAAASSPNDLPQSRNPSPSPVSGSSSESPSMESLIAEAAAYGNEANESLEAKA 60
           MGQ +S  A    P+D      P         S SPSMESL+AEA AYGN+ NESLEAKA
Sbjct: 1   MGQAQSEVA----PSDTADQMEPH-------FSSSPSMESLLAEAVAYGNDENESLEAKA 60

Query: 61  NRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120
            +ALECPCIADLR GPCGVQFS++F CF KST+EEKGSDCVHPFVALQ+CIKA PNAFSK
Sbjct: 61  QKALECPCIADLRNGPCGVQFSESFLCFLKSTSEEKGSDCVHPFVALQNCIKAKPNAFSK 120

Query: 121 DVLDEEEEEEEREKQKAEEPTKDYRIIPPSWSREPQAPKSKL 163
           D+L      EE E++K EEP ++Y+IIPP WSRE Q+PKSKL
Sbjct: 121 DIL------EEAEEKKEEEPAQEYKIIPPIWSRESQSPKSKL 145

[Close]
BLAST of CmoCh04G023310 vs. NCBI nr
Match: gi|703126391|ref|XP_010103569.1| (hypothetical protein L484_023064 [Morus notabilis])

HSP 1 Score: 194.9 bits (494), Expect = 1.1e-46
Identity = 105/166 (63.25%), Postives = 128/166 (77.11%), Query Frame = 1 

Query: 1   MGQTESVAAAASSPNDLPQS----RNPSPSPVSGSSSESPSMESLIAEAAAYGNEANESL 60
           MGQ +S  A+ +S   +P       + S  P S SSS S SMESLIAEAAAYGN+  ESL
Sbjct: 1   MGQVQSDVASEASNEHVPGGDRILSSSSAKPTSSSSSSSSSMESLIAEAAAYGNDGEESL 60

Query: 61  EAKANRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPN 120
           EAKA +ALECPCIA LR G CGVQFS+AF CF KSTAEEKGSDCVHPFVALQ+CIKANP+
Sbjct: 61  EAKAQKALECPCIAHLRSGSCGVQFSEAFLCFLKSTAEEKGSDCVHPFVALQNCIKANPD 120

Query: 121 AFSKDVLDEEEEEEEREKQKAEEPTKDYRIIPPSWSREPQAPKSKL 163
           AFSKD+L+++E ++E      E+PT++Y+I PP WS+EP++PKSKL
Sbjct: 121 AFSKDILEDDEVKKE------EQPTQEYKIYPPEWSKEPRSPKSKL 160

The following BLAST results are available for this feature:
BLAST of CmoCh04G023310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MIA40_USTMA1.5e-1142.47Mitochondrial intermembrane space import and assembly protein 40 OS=Ustilago may... [more]
MIA40_DEBHA9.6e-1133.04Mitochondrial intermembrane space import and assembly protein 40 OS=Debaryomyces... [more]
MIA40_CANAL3.7e-1040.58Mitochondrial intermembrane space import and assembly protein 40 OS=Candida albi... [more]
MIA40_KLULA8.2e-1033.90Mitochondrial intermembrane space import and assembly protein 40 OS=Kluyveromyce... [more]
MIA40_SCHPO2.4e-0933.33Mitochondrial intermembrane space import and assembly protein 40 OS=Schizosaccha... [more]
BLAST of CmoCh04G023310 vs. TrEMBL
Match NameE-valueIdentityDescription
A9P964_POPTR1.2e-4765.43Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s26120g PE=2 SV=1[more]
W9RWY3_9ROSA7.6e-4763.25Uncharacterized protein OS=Morus notabilis GN=L484_023064 PE=4 SV=1[more]
A0A067GNM5_CITSI4.6e-4461.96Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031983mg PE=4 SV=1[more]
V4UC65_9ROSI6.0e-4461.35Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016869mg PE=4 SV=1[more]
M0T014_MUSAM8.7e-4363.25Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
BLAST of CmoCh04G023310 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G23395.11.1e-4158.33 Cox19-like CHCH family protein[more]
BLAST of CmoCh04G023310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072357|ref|XP_008465292.1|1.6e-6685.19PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cuc... [more]
gi|449464958|ref|XP_004150196.1|6.4e-6381.71PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cuc... [more]
gi|224113229|ref|XP_002316429.1|1.7e-4765.43hypothetical protein POPTR_0010s26120g [Populus trichocarpa][more]
gi|743906318|ref|XP_011046571.1|8.4e-4764.81PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Pop... [more]
gi|703126391|ref|XP_010103569.1|1.1e-4663.25hypothetical protein L484_023064 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0006625 protein targeting to peroxisome
biological_process GO:0045041 protein import into mitochondrial intermembrane space
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005777 peroxisome
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G023310.1CmoCh04G023310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 116..136
scor
NoneNo IPR availablePANTHERPTHR21622COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4coord: 33..162
score: 5.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G023310CmaCh04G022310Cucurbita maxima (Rimu)cmacmoB729
CmoCh04G023310Cla009067Watermelon (97103) v1cmowmB707
CmoCh04G023310ClCG01G007940Watermelon (Charleston Gray)cmowcgB636
CmoCh04G023310Lsi09G008430Bottle gourd (USVL1VR-Ls)cmolsiB610
CmoCh04G023310Cp4.1LG01g19370Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G023310Cla97C01G008290Watermelon (97103) v2cmowmbB676
CmoCh04G023310Bhi12G000992Wax gourdcmowgoB0822
CmoCh04G023310Carg17763Silver-seed gourdcarcmoB0648
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G023310Cucumber (Gy14) v2cgybcmoB657
CmoCh04G023310Melon (DHL92) v3.6.1cmomedB714
CmoCh04G023310Silver-seed gourdcarcmoB1121
CmoCh04G023310Cucumber (Chinese Long) v3cmocucB0880
CmoCh04G023310Cucurbita moschata (Rifu)cmocmoB262
CmoCh04G023310Cucurbita maxima (Rimu)cmacmoB309
CmoCh04G023310Wild cucumber (PI 183967)cmocpiB778
CmoCh04G023310Cucumber (Chinese Long) v2cmocuB681
CmoCh04G023310Melon (DHL92) v3.5.1cmomeB625
CmoCh04G023310Cucurbita pepo (Zucchini)cmocpeB657