Cp4.1LG01g18270 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g18270
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Zinc finger, C3HC4 type (RING finger) family protein
Location	Cp4.1LG01 : 15552484 .. 15558591 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCTCCGCTCAACAGACTCCTTTCTTACGCTCCCGTCAGCCTTCCAACACTGACGGCTCTACTTCCCCCATCGGCCCCCTCGCCGTTCTCTTGGGCCGTGCCACTGGCCGCCGTGGAACTTCTATGGTAGTACGAGAGACGGCGGCACGTGAACTTGAAGAGCGCCGCATCGATTGGGGCTACTCCAAGCCGGTTGTGGCGGTTGACATTGCGTGGAATTTGGCTTTCGTTTTCGTTTCGTTGGGTGTGCTTATTCACTCGGTCGATGAAAAACCCAATACGCCAATTCGGCTTTGGATTTTAGTTTATGTGGCTCAGTGTTTGGTGCACTCTGTGCTTGTGTGGTTAGAGTTTAGAAGGAGGAATGCGAGGAGGGCTATGGATATGGAGACGCCGCAACACCCGCAACCTGATATTGACGGATATTTTTCTAATGAAAGCAATGACGAAGATGGTAGCCCGAGGAGTCTGTCCGGGTGAGTAAAATTTCAGTCCTCTCTGCTAAGATCAAGTTGTGATGGTCTTGAGTCCGAACTTTGGTTCTATTTGCTGAAATTCGATATGGGTTTGACCTCTATTTGATAGAATTTTTTCATTTGCTTATCAAAATGGCTTTTCTGACTTTAATTTTGTGTTCATTGTATGGATGACCAGGCAATTTTGTGTTCATTTCTGGCTTCTTAAATGTTTAACCCTGCATTCTTTTTGGAATCATAAATATTTGCCGCTTCTGCGTGCTTTTCTATTAATATGAACAGAACAGTTAAATTCAAGGATAAAGTACAGTGATTTATGAATTCAGAAAAGATAGTGCAGGGGTTATATATAGATAGGATAAGAGACTGGAGAAATTTTCATTAGATCGAGCAAAGGAAGAAGGGTAACGAGAAATCAACCAAATCCCTTTTTCTTTAGATTAAGAAAAATCCATTACATACTTTGATTAGTTCACAAATATAGCATTAATTATCTTCTTCCCTTTCCATAACTAAAAATTGAATTAGACCCTTTCTGCAATTTTCTGTTTTACTTTCACCTTCAATTCTTTCCAACACCTATTTATGGTCCCATCTTCAATTGAATTTGTTATCGTATCTTGCTTCAGTTATAAATTACTGATTTGATGATTTTTAAGTTGGTAGCATGTCATTGACTTGGTGGTATGGATGTGCAGTGTTGCCAGAAGATGTGAGACCGTGAACACCTTGGTATCGTTACTTTGGTGGTTGCTTGGCTTTTATTGGGTCATGGCTGGTGGTAACCTCCTCCTGCAGAATGCTCCATCTTTATACTGGTATGATTTTGAACCGTCGTGGTGCTGGCTGCATATCCTTCTTATGTTTGTATTATAAAGGAAAAATGTTTTTNGTATGATTTTGAACCGTCGTGGTGCTGGCTGCATATCCTTCTTATGTTTTTATTATAAAGGAAAAATGTATTTTTTTTTTCTTTTGATTGCTTGTAATGTGTTTCACATTGAAGGAAATCTGTCAACATTTTCCTGTTCTTCCCCCTCCATCATTGAAGCTCTGATTATTCTAGTCATTTCATGAATCATTTTCTAGATGGCATTTGATGTTCAGTTTCCTTCATTCTCAAATGTCTTAAATTCCTTCAAAATTAACCTGGGGGTGGTAAGCAGGTTGATTTTTGGCCCATAAGGACTGATGAAATTTATTCAAGTCAACCTTCTCAGACTAATTTTCAGCTTTTCACTTTAGCAATTCAAAATGCCTAATAAGTATTGTTCAGGTCGACATTACTGACTCATTTTCAGATAGTGTCAATGGCTTTTTAAGTTTCAGCTTGCACCCTTTAACTAACTAGCTTTTATGTGATTTTTACAATTTTGAAGTGGCCAATGAATTCCACTCTTCCTTTGGGGGGATAGCACTTCTTATCCCGTAGTCTTGACTATTGTTTTCATTTGGTTATGTTATAAAATGTAATAATAGTTCCCCTAATTGTTAATTATACTTTTAGTTAGTCCCTCCCTCAAAAGCTCTTTTAATTAATAAGCTAATAAAATTTCTGACATGGAATCAGTAATGAGCAAACATGTCCTTCCTTCTTCCGTTGCTGAAAATCNGAGCCATCAATCTAATAAATAAGCTAATAAAATTTCTGACATGGAATCGGTAATGAGCAAACATGTCCTTCCTTCTTCCGTTGCTGAAAATCAAATGGCTTTGGCGGCAAATAGACCAATTCTGTATGCTTATCTGATTGCAANTCAAATGGCTTTGGCAGCAAATAGACCAATTCTGTATGCTTATCTGATTGCAAATGAAGTAATTGATGTTTGGAATTTATCTCATAAGGAAGGTGTTGTCCTTAAACTAGATTTGGAGAAAGCTTTTGATAAAGTAGATTGGGATTTTCTGGATGTGATTTTACTGGCAAAAGGTTTTGGGCACAGATGGAGGAAACGGTTGTATCTCTATTGTCAGGTTTTTTATTATTATTAATGGGCTACTTAAAGGTAAAATCATTCTGACATGGGGTATTAGACAATAGGATCCTCTTTCTCCTTTCTTTTCATTTTGGTTTCTGATTGTCTCGGTCACATGTCATCACATGATGCTGGTTCGGGAAGAATTTTGACTTATTTGGTTGGTAAATCTCTTGTTCGATTAACAACTTTAAGATGATGATACTCTATAATTCTTGGTTTTTGTTTCGAAAATGTAAAATTTTGAGGGTTCATCGAAATGATTGAATTGGATTGGTTGACGACAATGTTTGGATGTAGACATGGGTCTTCTCCTTCTACTTATCTTGGTGTTCCGTTGGGTGGTAATGCGAAGACTTTCCTTTTTTGGCAGCCTGTATTTGAAAAAATTCATCATAAGTTACATAGTTGGAAATATGCCTTCATTTCGAAAGGTGGTCTCCATACCCTTATTCATGCCACTCTTTCTAATGTGCCTACTTATTACCCTTCTTTATTCAAATTACCATCTAAGGTTGCTAAAACTCTGGACAAGCTGCTTAGAGGCTTTTTTTGGGAAGGTTCTAGAGGAGATGGTGGAATGCATAACATTAATTAGGAGAAGAGACTGCTCCCTCAACTTTCAAGGAAGTTAGGTATTGGTCATTTTTCAGGTTCAAAATTTGTCTCCATTATGGAAATGGATTTGGAGGTTTCTGGATGAAAAAGATTCACTTTGTCACTATATCATTGTTGGTAAATTCTATCAATCAAAGGATATTGGTTTGTGACCTAAGGCTGTTATGAGGGATTGTTTTAAATAACCGTGGTGTGCTATTTCTTCTACTTTTGACCTTATTGGCAATCGCGTCCAGAGATGTATTGGAAATGGTATTCACACTGCTTTTTGGCATGATTCTTGGCTAATTTGTTGGAAGATTGCTATGGCTTTTCCTAAACTTTTTTGGTTAACAAATAGGCCTCATGCTACAGTAGCTCAATTATGGAATAGTTCAAATGCCGCTTGGGATTTGGGGCTTCAACGCAATCCTACTGATTCGGAGGTTATTGAATTGGCTTATCTCTCCAATCGTCTATTGGTCATTACCTTACAACCTGTTAATGATTCTTGGGTTTGGCCACTTACCTCTTCAAAAATTGTCACTGTAAAGTCTATCATGAGTGATCTAGTGCATGACATTAGCCCTAAATCGAACCACCTTTACTCGGTGGTTTGGATAGATGTTTATCCTAAGAAAATTAAAATTTTCCTATGGGAGCTTAGTCATGGTACTATCAATAAAGCTGATCGTTTACAAAGGAGGATGCTTCATTTTGTCTTATCACAACATCCTATTATGTTATGTGTTGTTCCAGTTCAGAATTTTCTTGTCATCCATTCGTTCATTGCCTTTTTTCTTCACAATTTTGTGCAACTTTGCTTGATGCTTTTGGATGGTCCATGGGCTTACCAAACACCATTCAGAGCTCTTGGATTTGGTTTTCGTGGGACATCCTTTTCATGTTGTCAAAAAGATTGTTTGGCTTGCTATTAATCGAGTTTTCTTTTGGTATATAATGGTGTGAAAGAAATGGGAGAATCTTTAGGTTCTCTTTCTCATCTTTTGGTAGTTTCTTGGATTTGATTCGTTTTCATTCTTTGTATTTTTGCAAGAATAAACACCCTTTTTGTGACTATAGGATTTCAACTTCAATTTCCCATTGGAGAACGTTTTTGTAATCATCTATTGATGTTTGGAGTTTTTATAAGCTTCCTTTATTTCATTTAACATTGAAATTGTTTCTTTCTAAAAAAAACCCCTGTAATGAGCATAAAGGAAGTTCCGGGTTTTTTTTTTTTCTTCCCCTGTTTTAAAATGAAGGAACTACCCCAGTCATGAATCTGGTGATTCAAGCTTGGAGTGTTTGATGGTAACCTCTGGATAAAACTTAATGATGTAGGGCAGCTACTTGTTGGAATAATCATGGGAAAACCCTGTGTTTTTTATGTTGGATTGCTATGTTCCTTCATTTTGTTCTGTTTTTCAGATTAGGCTTTGGTAGCCGTTACTCTTGATTTGTTTCAAGCTTGTTATTAGGCTCTTACAAGTAATTATTAGCTTTAGTCCAACTAGCCGTCGACTGGTTGTTAGAGCTAGTATGTAAGTGTTAAACCGAATCTTTTAATAGAACTTCTTTTCATCAGGGTAGATGTAGATGATGAGCATAATACAAGGATTTGGAACCTNAGCTTGTTATTAGGCTCTTACAAGTAATTATTAGCTTTAGTCCAACTAGCCGTCGACTGGTTGTTAGAGCTAGTATGTAAGTTTTAAACCGAATCTTTTAATAGAACTTCTTTTCATCGGGGTAGATGTAGATGATGAGCATAATACAAGGATTTGGAACCTTCATATCCTGGTTCTTTTTAAAAAACAGAAGGGATCCAATCAAATTTGAAGTGCTTTTATTAGTATTATTTGGTTGGGAGGGGGCATGCAGATTTTTGTATATCATTTATCTGTTCCAAATTCAAATTAAAGACTTTCATGGTTTCTAATTCTGAGTTCTTGCAGGCTGGCTGTCGTATTTCTGGCATTTGATGTGTTCTTTGCCATCTTTTGTGTTGTTTTGGCATGTTTGATTGGAATAGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTTTATGCTGTTGCAGGCCAGGTAAGAGGAAATCCCGGTTTTCATGGTTGCTAAAGAGATGTTAGGCAGAATGAAGGCACATGAAACCTGCTAACTTCTTTCTTTCCTTTTTCCCTTCACATGAATCTCAGCAGGAAGGTGCAACTGAGGCAGATTTAAGTACTCTTTCTAAGTATAGATATCAAGTATCCAACAATCCTTCTCCCGGGGACGGGTTGATGGTTCCAATAGAAACAAGCAGCCGATACTTGACGACTGAACATGTTCTATTACGAGAGGATGCGGTAAAGTTAATTGTTTTATCGTTCTTTATAAGTTTGTGTTCCTGTTAGTCACACTTCTTCCGTATCATACATCTAATGTGTACATATAGAGATAGAACTAAATAGATAATGTGTGTACGGTAGGTAGAAGGAAATCTAAAGGTCACTACAGTTTGGGAACAGAGTAGGGACTGAATTTATAATTTAACGCAAGAAAGTATGAGATCCCACATTAGTTGGAAAGGGGAACGAAGCATTCCTCGTAAGGGTATGGAAACCTCTCCCTAGTAAACACGTTTTAAAAAACCTTGAGGGGAAGCCTAGAAGGAAAAGTCCAAAGAAGAAATATCTGCAAGCGGCGGGCTTGGGTTGTTACTAGGAAGTATTCAATTAGATAACCATTATGATCTTTCTCTTCTTTCTTGAACCAATTTCATCTAAAAACTNGGCGGGCTTGGGTTGTTACTAGGAAGTATTCAATTAGATAACCATCATGATCTTTCTCTTCTTTCTTGAACCAATTTCATCTAAAAACTCAATGTTTATGCATAATCTTTGTGCTCTTCCTTTCAGGAGTGTTGTATATGTCTTAGTTCATACGAGGACGGAGTCGAGCTTCATGCTCTTCCCTGTAATCACCATTTTCATTACTCGTGTAGCACAAAATGGCTGAAGATGAATGCAACCTGCCCTCTNCGAGCTTCATGCTCTTCCCTGTAA

mRNA sequence

ATGGCGGCCTCCGCTCAACAGACTCCTTTCTTACGCTCCCGTCAGCCTTCCAACACTGACGGCTCTACTTCCCCCATCGGCCCCCTCGCCGTTCTCTTGGGCCGTGCCACTGGCCGCCGTGGAACTTCTATGGTAGTACGAGAGACGGCGGCACGTGAACTTGAAGAGCGCCGCATCGATTGGGGCTACTCCAAGCCGGTTGTGGCGGTTGACATTGCGTGGAATTTGGCTTTCGTTTTCGTTTCGTTGGGTGTGCTTATTCACTCGGTCGATGAAAAACCCAATACGCCAATTCGGCTTTGGATTTTAGTTTATGTGGCTCAGTGTTTGGTGCACTCTGTGCTTGTGTGGTTAGAGTTTAGAAGGAGGAATGCGAGGAGGGCTATGGATATGGAGACGCCGCAACACCCGCAACCTGATATTGACGGATATTTTTCTAATGAAAGCAATGACGAAGATGGTAGCCCGAGGAGTCTGTCCGGTGTTGCCAGAAGATGTGAGACCGTGAACACCTTGGTATCGTTACTTTGGTGGTTGCTTGGCTTTTATTGGGTCATGGCTGGTGGTAACCTCCTCCTGCAGAATGCTCCATCTTTATACTGGCTGGCTGTCGTATTTCTGGCATTTGATGTGTTCTTTGCCATCTTTTGTGTTGTTTTGGCATGTTTGATTGGAATAGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTTTATGCTGTTGCAGGCCAGGAAGGTGCAACTGAGGCAGATTTAAGTACTCTTTCTAAGTATAGATATCAAGTATCCAACAATCCTTCTCCCGGGGACGGGTTGATGGTTCCAATAGAAACAAGCAGCCGATACTTGACGACTGAACATGTTCTATTACGAGAGGATGCGGAGTGTTGTATATGTCTTAGTTCATACGAGGACGGAGTCGAGCTTCATGCTCTTCCCTGTAATCACCATTTTCATTACTCGTGTAGCACAAAATGGCTGAAGATGAATGCAACCTGCCCTCTNCGAGCTTCATGCTCTTCCCTGTAA

Coding sequence (CDS)

ATGGCGGCCTCCGCTCAACAGACTCCTTTCTTACGCTCCCGTCAGCCTTCCAACACTGACGGCTCTACTTCCCCCATCGGCCCCCTCGCCGTTCTCTTGGGCCGTGCCACTGGCCGCCGTGGAACTTCTATGGTAGTACGAGAGACGGCGGCACGTGAACTTGAAGAGCGCCGCATCGATTGGGGCTACTCCAAGCCGGTTGTGGCGGTTGACATTGCGTGGAATTTGGCTTTCGTTTTCGTTTCGTTGGGTGTGCTTATTCACTCGGTCGATGAAAAACCCAATACGCCAATTCGGCTTTGGATTTTAGTTTATGTGGCTCAGTGTTTGGTGCACTCTGTGCTTGTGTGGTTAGAGTTTAGAAGGAGGAATGCGAGGAGGGCTATGGATATGGAGACGCCGCAACACCCGCAACCTGATATTGACGGATATTTTTCTAATGAAAGCAATGACGAAGATGGTAGCCCGAGGAGTCTGTCCGGTGTTGCCAGAAGATGTGAGACCGTGAACACCTTGGTATCGTTACTTTGGTGGTTGCTTGGCTTTTATTGGGTCATGGCTGGTGGTAACCTCCTCCTGCAGAATGCTCCATCTTTATACTGGCTGGCTGTCGTATTTCTGGCATTTGATGTGTTCTTTGCCATCTTTTGTGTTGTTTTGGCATGTTTGATTGGAATAGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTTTATGCTGTTGCAGGCCAGGAAGGTGCAACTGAGGCAGATTTAAGTACTCTTTCTAAGTATAGATATCAAGTATCCAACAATCCTTCTCCCGGGGACGGGTTGATGGTTCCAATAGAAACAAGCAGCCGATACTTGACGACTGAACATGTTCTATTACGAGAGGATGCGGAGTGTTGTATATGTCTTAGTTCATACGAGGACGGAGTCGAGCTTCATGCTCTTCCCTGTAATCACCATTTTCATTACTCGTGTAGCACAAAATGGCTGAAGATGAATGCAACCTGCCCTCTNCGAGCTTCATGCTCTTCCCTGTAA

Protein sequence

MAASAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRRRNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRSLSGVARRCETVNTLVSLLWWLLGFYWVMAGGNLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPIETSSRYLTTEHVLLREDAECCICLSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPLRASCSSL

Homology

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BLAST of Cp4.1LG01g18270 vs. Swiss-Prot
Match: RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.8e-107
Identity = 201/341 (58.94%), Postives = 245/341 (71.85%), Query Frame = 1


Query: 2   AASAQQTPFLRSRQPSNTDGSTSPIGP--LAVLLGRATGRRGTSMVVRETAARELEERRI 61
           AA  Q  P LR R   +   S+S   P  LAVLLGR TG R  SM+VRETAAR LEERRI
Sbjct: 10  AARDQHAPLLRPRHDGSFSSSSSSARPTALAVLLGRITGHRAPSMLVRETAARALEERRI 69

Query: 62  DWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLE 121
           DWGYSKPVVA DI WN A V  S  +L+ +V+E+PN PIR+WI VY  QCL H VLVW E
Sbjct: 70  DWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSE 129

Query: 122 FRRRNA-RRAMDMETPQHPQPDIDGYFSNESNDEDGSPRSLSGVARRCETVNTLVSLLWW 181
           + RRN+ RRA D+E+  H   +I+  +  +S+D      +     +RCE++NT++S +WW
Sbjct: 130 YWRRNSTRRARDLESYDHEDYNIEYDYEQDSDDNS----TTYSFVKRCESINTVISFIWW 189

Query: 182 LLGFYWVMAGGNLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 241
           ++GFYWV+ GG+ LL  AP+LYWL+V+FLA DVFFA+FCVVLACL+GIALCCCLPCIIA+
Sbjct: 190 IIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIAL 249

Query: 242 LYAVAGQEGATEADLSTLSKYRYQV--SNNPS-PGDGLMVPIETSSRYLTTEHVLLREDA 301
           LYAVAG EG +EA+L  L  Y+++   SN  +  G G MVPI  +   L TE  LL EDA
Sbjct: 250 LYAVAGTEGVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLAEDA 309

Query: 302 ECCICLSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL 337
           +CCICLSSYEDG ELHALPCNHHFH +C  KWLKM ATCPL
Sbjct: 310 DCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPL 346

[Close]

BLAST of Cp4.1LG01g18270 vs. Swiss-Prot
Match: RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.1e-84
Identity = 170/336 (50.60%), Postives = 220/336 (65.48%), Query Frame = 1


Query: 30  AVLLGRAT-GR--RGTSMVVRETAARELEERRIDWGYSKPVVAVDIAWNLAFVFVSLGVL 89
           A  L RA+ GR  R  SM+VRE AA +LEER+ DW YSKPVV +DI WNLAFV V+  +L
Sbjct: 60  ARFLSRASSGRVMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAIL 119

Query: 90  IHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRRRNARRAMDMETPQHPQPDIDGYFS 149
           + S  E P  P+R+W+L Y  QC++H V V +E+RRRN RR     T   P+       S
Sbjct: 120 VMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSS 179

Query: 150 NESNDED---GSPRS--------------LSGVARRCETVNTLVSLLWWLLGFYWVMAGG 209
           + S+ E+   GS R+               S VA+  E+ NT+ S +WW++GFYWV AGG
Sbjct: 180 SSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGG 239

Query: 210 NLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGAT 269
             L Q +P +YWL++VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGA+
Sbjct: 240 QELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGAS 299

Query: 270 EADLSTLSKYRYQV-------SNNPSPG--DGLMVPIETSSRYLTTEHVLLREDAECCIC 329
           + D+  L+K++++        +N+ + G  +G+M    T S     EH LL+EDAECCIC
Sbjct: 300 KEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDS---PIEHTLLQEDAECCIC 359

Query: 330 LSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL 337
           LS+YEDG EL  LPC HHFH SC  KWL +NATCPL
Sbjct: 360 LSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPL 392

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BLAST of Cp4.1LG01g18270 vs. Swiss-Prot
Match: RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 306.6 bits (784), Expect = 3.4e-82
Identity = 158/321 (49.22%), Postives = 205/321 (63.86%), Query Frame = 1


Query: 40  RGTSMVVRETAARELEERRIDWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIR 99
           R  SM+VRE AA +LEER+ DW YSKPVV +D  WNLAFV V+  VL+ S DE PN P+R
Sbjct: 47  REPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLR 106

Query: 100 LWILVYVAQCLVHSVLVWLEFRRRNARRAMDME--------TPQHPQPDIDGYFSNESND 159
           +WI+ Y  QC++H V V +E+RRRN+RR  D+         +      + +G   + ++D
Sbjct: 107 VWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSD 166

Query: 160 E-----DGSPRSLSGVARRCETVNTLVSLLWWLLGFYWVMAGGNLLLQNAPSLYWLAVVF 219
           E            +  A+  E+ NT++S +WW++GFYWV +GG  L Q +P LYWL +VF
Sbjct: 167 ERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVF 226

Query: 220 LAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATEADLSTLSKYRYQ---- 279
           L FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGA++ D+  L+K++++    
Sbjct: 227 LGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGD 286

Query: 280 -----VSNNPSPGD--GLMVPIETSSRYLTTEHVLLREDAECCICLSSYEDGVELHALPC 337
                V      GD  G+M    T S     EH L  EDAECCICLS+YED  EL  LPC
Sbjct: 287 TMKHTVDEEQGQGDSGGVMTECGTDS---PVEHALPHEDAECCICLSAYEDETELRELPC 346

[Close]

BLAST of Cp4.1LG01g18270 vs. Swiss-Prot
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.7e-81
Identity = 157/307 (51.14%), Postives = 199/307 (64.82%), Query Frame = 1


Query: 40  RGTSMVVRETAARELEERRIDWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIR 99
           R  SM+VRETAA +LEER+ DW YSKPVV +DI WNLAFV + + VLI S DEKPN P+R
Sbjct: 82  REPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLR 141

Query: 100 LWILVYVAQCLVHSVLVWLEFRRRNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRSL 159
           +W++ Y  QC +H   V +E+RRR  RR        HP+       +N S+ +  S   L
Sbjct: 142 VWVVGYGIQCWLHMACVCVEYRRRRRRR--------HPEDGGGSGLTNSSSQQYVSLAQL 201

Query: 160 ------SGVARRCETVNTLVSLLWWLLGFYWVMAGGNLLLQNAPSLYWLAVVFLAFDVFF 219
                 S  A+  E+ NT+ S +WW++GFYWV AGG  L  ++P LYWL ++FL FDVFF
Sbjct: 202 EDRGETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFF 261

Query: 220 AIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATEADLSTLSKYRYQVSNN----PSP 279
            +FCV LAC+IG+A+CCCLPCIIAILYAVA QEGA++ D+  + K+R+  + N       
Sbjct: 262 VVFCVALACVIGLAVCCCLPCIIAILYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSGK 321

Query: 280 GDGLMVPIETSSRYLTTEHVLLREDAECCICLSSYEDGVELHALPCNHHFHYSCSTKWLK 337
             G+M    T S     E  L  EDAECCICL  YEDGVEL  LPCNHHFH +C  KWL 
Sbjct: 322 ARGIMTECGTDS---PIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLH 377

[Close]

BLAST of Cp4.1LG01g18270 vs. Swiss-Prot
Match: RNF44_DANRE (RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.9e-09
Identity = 35/102 (34.31%), Postives = 44/102 (43.14%), Query Frame = 1


Query: 243 AGQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPIETSSRYLTTEHVLLREDAECCICLS 302
           A   G T+AD+  L  YR+ + N+ S                        E   C +C S
Sbjct: 366 AKPRGLTKADIEQLPSYRFNLENHQS------------------------EQTLCVVCFS 425

Query: 303 SYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL-RASCSSL 344
            +E    L  LPCNH FH  C  KWLK N TCP+ RA  S +
Sbjct: 426 DFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADASEV 443

[Close]

BLAST of Cp4.1LG01g18270 vs. TrEMBL
Match: E5GB66_CUCME (Zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 9.8e-161
Identity = 285/337 (84.57%), Postives = 306/337 (90.80%), Query Frame = 1


Query: 1   MAASAQQTPFLRSRQP-SNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRI 60
           M   AQQ P L SRQP SN+D STSPIGPLA+LLGRATGRRGTSM+VRETAARELEERRI
Sbjct: 10  MDPPAQQIPLLPSRQPPSNSDASTSPIGPLALLLGRATGRRGTSMLVRETAARELEERRI 69

Query: 61  DWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLE 120
           DWGYSKPVVA+DI WNLAFVFVSLGVLI SV EKPNTPIRLWI+VY AQCLVH VLVW E
Sbjct: 70  DWGYSKPVVALDITWNLAFVFVSLGVLIRSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFE 129

Query: 121 FRRRNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRSLSGVARRCETVNTLVSLLWWL 180
           F+RRNARRA DMET Q  QPD  GY +NES+++DG  RSLS VA+RCE+VNTLVSL+WWL
Sbjct: 130 FKRRNARRARDMETQQQQQPD--GYVTNESDEDDGGQRSLSSVAKRCESVNTLVSLIWWL 189

Query: 181 LGFYWVMAGGNLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 240
            GFYWV+AGGN+L+QNAPSLYWLAVVFLAFDVFFA+FCVVLACLIGIALCCCLPCIIAIL
Sbjct: 190 FGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAIL 249

Query: 241 YAVAGQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPIETSSRYLTTEHVLLREDAECCI 300
           YAVAGQEGAT+ADLS L KYRY+VSN PSPGDGLMVP+ETSSRYLTTE VLLREDAECCI
Sbjct: 250 YAVAGQEGATDADLSMLPKYRYRVSNEPSPGDGLMVPVETSSRYLTTERVLLREDAECCI 309

Query: 301 CLSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL 337
           CLS YEDGVELHALPCNHHFHY+C TKWLKMNATCPL
Sbjct: 310 CLSPYEDGVELHALPCNHHFHYACITKWLKMNATCPL 344

[Close]

BLAST of Cp4.1LG01g18270 vs. TrEMBL
Match: A0A0A0KRG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G561780 PE=4 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 1.1e-159
Identity = 282/337 (83.68%), Postives = 305/337 (90.50%), Query Frame = 1


Query: 1   MAASAQQTPFLRSRQP-SNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRI 60
           M   AQQ P L SRQP SN+D STSPIGPLA+LLGRATGRRGTSM+VRETAARELEERRI
Sbjct: 10  MDPPAQQIPLLPSRQPPSNSDASTSPIGPLALLLGRATGRRGTSMLVRETAARELEERRI 69

Query: 61  DWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLE 120
           DWGYSKPVVA+DI WNLAFVFVSLGVLIHSV EKPNTPIRLWI+VY AQCLVH VLVW E
Sbjct: 70  DWGYSKPVVALDITWNLAFVFVSLGVLIHSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFE 129

Query: 121 FRRRNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRSLSGVARRCETVNTLVSLLWWL 180
           F+RRNARRA DMET Q  +PD  GY +NES+++DG  RS S VA+RCE+VNT+VSL+WWL
Sbjct: 130 FKRRNARRARDMETQQQQEPD--GYVTNESDEDDGGQRSFSSVAKRCESVNTMVSLIWWL 189

Query: 181 LGFYWVMAGGNLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 240
            GFYWV+AGGN+L+QNAPSLYWLAVVFLAFDVFFA+FCVVLACLIGIALCCCLPCIIAIL
Sbjct: 190 FGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAIL 249

Query: 241 YAVAGQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPIETSSRYLTTEHVLLREDAECCI 300
           YAVAGQEGAT+ADLS L KYRY+VSN PSPGDGLMVP+ETSSRYLTTE VLL EDAECCI
Sbjct: 250 YAVAGQEGATDADLSMLPKYRYRVSNEPSPGDGLMVPVETSSRYLTTERVLLCEDAECCI 309

Query: 301 CLSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL 337
           CLS YEDGVELHALPCNHHFHY+C TKWLKMNATCPL
Sbjct: 310 CLSPYEDGVELHALPCNHHFHYACITKWLKMNATCPL 344

[Close]

BLAST of Cp4.1LG01g18270 vs. TrEMBL
Match: A0A061EFM2_THECC (Zinc finger, C3HC4 type (RING finger) family protein isoform 1 OS=Theobroma cacao GN=TCM_011052 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 1.2e-123
Identity = 240/345 (69.57%), Postives = 266/345 (77.10%), Query Frame = 1


Query: 3   ASAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG 62
           AS    P LR RQP   D S +    LA+LLGRATGRRG SM+VRETAARELEERR DWG
Sbjct: 13  ASDSHAPLLRPRQP---DASAARPATLALLLGRATGRRGASMLVRETAARELEERRADWG 72

Query: 63  YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR 122
           YSKPVVA+D+ WN AFV VS+ +LI +VDE+ NTPIRLWI  Y  QCLVH VLVWLE+RR
Sbjct: 73  YSKPVVALDMLWNTAFVAVSVAMLICTVDERTNTPIRLWICGYALQCLVHVVLVWLEYRR 132

Query: 123 RNARR--AMDMETPQHPQPDIDGYFSNESNDE-DGSPRSLSG-----VARRCETVNTLVS 182
           RN RR  A D E       D     +N+S DE DG  RS  G     V +RCE+VNT+VS
Sbjct: 133 RNVRRTSARDEERGDATSGD-----ANDSEDEQDGIERSAFGSNQSSVTKRCESVNTMVS 192

Query: 183 LLWWLLGFYWVMAGGNLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
            LWW++GFYWV++GGN LLQNAP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC
Sbjct: 193 FLWWIVGFYWVVSGGNYLLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 252

Query: 243 IIAILYAVAGQEGATEADLSTLSKYRYQVSNN---PSPGDGLMVPIETSSRYLTTEHVLL 302
           IIAILYAVAGQEGA+EADLS L KYR+Q+ NN    S G G MVP+ETSS YL  E +LL
Sbjct: 253 IIAILYAVAGQEGASEADLSILPKYRFQIINNGGKASVGAGKMVPVETSSGYLANERILL 312

Query: 303 REDAECCICLSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL 337
            EDAECCICLSSYEDG +LHALPCNHHFH +C  KWLKMNATCPL
Sbjct: 313 PEDAECCICLSSYEDGADLHALPCNHHFHSACIVKWLKMNATCPL 349

[Close]

BLAST of Cp4.1LG01g18270 vs. TrEMBL
Match: A0A0D2NDG7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G157000 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 2.1e-123
Identity = 234/344 (68.02%), Postives = 267/344 (77.62%), Query Frame = 1


Query: 1   MAASAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRID 60
           MAAS    P LR RQP   DGS +    LA LLGRATGRRG SM+VRETAARELEERR D
Sbjct: 1   MAASDPHAPLLRPRQP---DGSAARPVSLAHLLGRATGRRGASMLVRETAARELEERRAD 60

Query: 61  WGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEF 120
           WGYSKPVVA+D+ WN AFV VS+ +LI + DE PNTPIRLWI  Y  QCL+H VLVWLE+
Sbjct: 61  WGYSKPVVALDMLWNTAFVVVSVVMLISTADETPNTPIRLWICAYALQCLLHVVLVWLEY 120

Query: 121 RRRNARR--AMDMETPQHPQPDIDGYFSNESNDEDGS---PRSLSGVARRCETVNTLVSL 180
           RRRN+RR    D E  +    D+     N+S DE+ S     + S + +RCETVNT+ S 
Sbjct: 121 RRRNSRRISVTDEERGEAVSGDV-----NDSEDEEDSGLFGSNESSITKRCETVNTMASF 180

Query: 181 LWWLLGFYWVMAGGNLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 240
           LWW++GFYWV++GG++LLQNAP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI
Sbjct: 181 LWWIVGFYWVVSGGDILLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 240

Query: 241 IAILYAVAGQEGATEADLSTLSKYRYQVSNN---PSPGDGLMVPIETSSRYLTTEHVLLR 300
           IAILYA+  QEGA+EADLS L KY++Q+ NN   PS G G M+PIETSS YL  E +LL 
Sbjct: 241 IAILYAITEQEGASEADLSILPKYKFQIINNREKPSLGAGKMIPIETSSGYLANERILLP 300

Query: 301 EDAECCICLSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL 337
           EDAECCICLSSYEDGV+LHALPCNHHFH +C  KWLKMNATCPL
Sbjct: 301 EDAECCICLSSYEDGVDLHALPCNHHFHSTCIVKWLKMNATCPL 336

[Close]

BLAST of Cp4.1LG01g18270 vs. TrEMBL
Match: A0A067KPP8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04760 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 2.6e-121
Identity = 229/342 (66.96%), Postives = 258/342 (75.44%), Query Frame = 1


Query: 2   AASAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDW 61
           A S  + P L  RQ   +  +  P   LA LLGRATGRRG SM+VRETAARELEERR DW
Sbjct: 13  AESGSRAPLLLPRQEPPSSPTVRPTS-LAFLLGRATGRRGPSMLVRETAARELEERRADW 72

Query: 62  GYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFR 121
           GYSKPVVA+D+ WN AFV VS+ +LI + DEKPNTP+R+WI  Y  QCLVH VLVWLE+R
Sbjct: 73  GYSKPVVALDMLWNTAFVVVSITMLILTADEKPNTPVRIWICGYALQCLVHVVLVWLEYR 132

Query: 122 RRNARRAMDMETPQHPQPDIDGYFSNESNDED----GSPRSLSGVARRCETVNTLVSLLW 181
           RRN+R   D    Q  Q   +G   +E  D      GS  S S V +RCE+VNT+ S LW
Sbjct: 133 RRNSRTGRDEMRRQRQQETEEGNVDSEDEDSSDRGSGSFSSRSSVTKRCESVNTMASFLW 192

Query: 182 WLLGFYWVMAGGNLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 241
           W++GFYWV++GG+LLLQNAP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA
Sbjct: 193 WIVGFYWVVSGGDLLLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 252

Query: 242 ILYAVAGQEGATEADLSTLSKYRYQVSNN---PSPGDGLMVPIETSSRYLTTEHVLLRED 301
           ILYAVAGQEGA+EADLS L KYR+Q+  N   P+ G G MVPIETSS YL  E +LL ED
Sbjct: 253 ILYAVAGQEGASEADLSILPKYRFQMMVNEEKPTVGAGKMVPIETSSGYLANERILLPED 312

Query: 302 AECCICLSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL 337
           AECCICL  YEDG ELH LPCNHHFH +C  KWLKMNATCPL
Sbjct: 313 AECCICLCPYEDGAELHTLPCNHHFHSTCIVKWLKMNATCPL 353

[Close]

BLAST of Cp4.1LG01g18270 vs. TAIR10
Match: AT1G68070.1 (AT1G68070.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 411.0 bits (1055), Expect = 7.2e-115
Identity = 215/339 (63.42%), Postives = 253/339 (74.63%), Query Frame = 1


Query: 2   AASAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDW 61
           + S   TP LRSRQ S       P+  +AVLL RA+GRRG SMVVRETAA+ELEERR DW
Sbjct: 8   SGSDSSTPLLRSRQSSPR---RQPV--IAVLLNRASGRRGASMVVRETAAQELEERRADW 67

Query: 62  GYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFR 121
           GYSKPVVA+D+ WN AFV V++ +L+   +EKPN PIR+WI  Y  QCLVH VLVWLEFR
Sbjct: 68  GYSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFR 127

Query: 122 RRNAR-RAMDMETPQHPQPDIDGYFSNESNDEDGSPRSLSGVARRCETVNTLVSLLWWLL 181
           +RNAR R  D+E  Q    D        S DED   R LS   + CE++NT++S +WW++
Sbjct: 128 KRNARSRPGDLEAAQATNQD--------SEDEDNDERFLS--TKTCESMNTIISFVWWIV 187

Query: 182 GFYWVMAGGNLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILY 241
           GFYW+++GG++LLQNA  LYWL  VFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA+LY
Sbjct: 188 GFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALLY 247

Query: 242 AVAGQEGATEADLSTLSKYRYQVSNN---PSPGDGLMVPIETSSRYLTTEHVLLREDAEC 301
           AVAGQEGA+EADLS L KYR+   NN    S G G M+P++ +S  L  E VLL EDA+C
Sbjct: 248 AVAGQEGASEADLSILPKYRFHTMNNDEKQSDGGGKMIPVDAASENLGNERVLLPEDADC 307

Query: 302 CICLSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL 337
           CICLSSYEDG EL +LPCNHHFH +C  KWLKMNATCPL
Sbjct: 308 CICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPL 331

[Close]

BLAST of Cp4.1LG01g18270 vs. TAIR10
Match: AT2G01735.1 (AT2G01735.1 RING-finger protein for embryogenesis)

HSP 1 Score: 390.6 bits (1002), Expect = 1.0e-108
Identity = 201/341 (58.94%), Postives = 245/341 (71.85%), Query Frame = 1


Query: 2   AASAQQTPFLRSRQPSNTDGSTSPIGP--LAVLLGRATGRRGTSMVVRETAARELEERRI 61
           AA  Q  P LR R   +   S+S   P  LAVLLGR TG R  SM+VRETAAR LEERRI
Sbjct: 10  AARDQHAPLLRPRHDGSFSSSSSSARPTALAVLLGRITGHRAPSMLVRETAARALEERRI 69

Query: 62  DWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLE 121
           DWGYSKPVVA DI WN A V  S  +L+ +V+E+PN PIR+WI VY  QCL H VLVW E
Sbjct: 70  DWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSE 129

Query: 122 FRRRNA-RRAMDMETPQHPQPDIDGYFSNESNDEDGSPRSLSGVARRCETVNTLVSLLWW 181
           + RRN+ RRA D+E+  H   +I+  +  +S+D      +     +RCE++NT++S +WW
Sbjct: 130 YWRRNSTRRARDLESYDHEDYNIEYDYEQDSDDNS----TTYSFVKRCESINTVISFIWW 189

Query: 182 LLGFYWVMAGGNLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 241
           ++GFYWV+ GG+ LL  AP+LYWL+V+FLA DVFFA+FCVVLACL+GIALCCCLPCIIA+
Sbjct: 190 IIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIAL 249

Query: 242 LYAVAGQEGATEADLSTLSKYRYQV--SNNPS-PGDGLMVPIETSSRYLTTEHVLLREDA 301
           LYAVAG EG +EA+L  L  Y+++   SN  +  G G MVPI  +   L TE  LL EDA
Sbjct: 250 LYAVAGTEGVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLAEDA 309

Query: 302 ECCICLSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL 337
           +CCICLSSYEDG ELHALPCNHHFH +C  KWLKM ATCPL
Sbjct: 310 DCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPL 346

[Close]

BLAST of Cp4.1LG01g18270 vs. TAIR10
Match: AT1G12760.1 (AT1G12760.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 313.9 bits (803), Expect = 1.2e-85
Identity = 170/336 (50.60%), Postives = 220/336 (65.48%), Query Frame = 1


Query: 30  AVLLGRAT-GR--RGTSMVVRETAARELEERRIDWGYSKPVVAVDIAWNLAFVFVSLGVL 89
           A  L RA+ GR  R  SM+VRE AA +LEER+ DW YSKPVV +DI WNLAFV V+  +L
Sbjct: 60  ARFLSRASSGRVMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAIL 119

Query: 90  IHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRRRNARRAMDMETPQHPQPDIDGYFS 149
           + S  E P  P+R+W+L Y  QC++H V V +E+RRRN RR     T   P+       S
Sbjct: 120 VMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSS 179

Query: 150 NESNDED---GSPRS--------------LSGVARRCETVNTLVSLLWWLLGFYWVMAGG 209
           + S+ E+   GS R+               S VA+  E+ NT+ S +WW++GFYWV AGG
Sbjct: 180 SSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGG 239

Query: 210 NLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGAT 269
             L Q +P +YWL++VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGA+
Sbjct: 240 QELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGAS 299

Query: 270 EADLSTLSKYRYQV-------SNNPSPG--DGLMVPIETSSRYLTTEHVLLREDAECCIC 329
           + D+  L+K++++        +N+ + G  +G+M    T S     EH LL+EDAECCIC
Sbjct: 300 KEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDS---PIEHTLLQEDAECCIC 359

Query: 330 LSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL 337
           LS+YEDG EL  LPC HHFH SC  KWL +NATCPL
Sbjct: 360 LSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPL 392

[Close]

BLAST of Cp4.1LG01g18270 vs. TAIR10
Match: AT1G63170.1 (AT1G63170.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 306.6 bits (784), Expect = 1.9e-83
Identity = 158/321 (49.22%), Postives = 205/321 (63.86%), Query Frame = 1


Query: 40  RGTSMVVRETAARELEERRIDWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIR 99
           R  SM+VRE AA +LEER+ DW YSKPVV +D  WNLAFV V+  VL+ S DE PN P+R
Sbjct: 47  REPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLR 106

Query: 100 LWILVYVAQCLVHSVLVWLEFRRRNARRAMDME--------TPQHPQPDIDGYFSNESND 159
           +WI+ Y  QC++H V V +E+RRRN+RR  D+         +      + +G   + ++D
Sbjct: 107 VWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSD 166

Query: 160 E-----DGSPRSLSGVARRCETVNTLVSLLWWLLGFYWVMAGGNLLLQNAPSLYWLAVVF 219
           E            +  A+  E+ NT++S +WW++GFYWV +GG  L Q +P LYWL +VF
Sbjct: 167 ERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVF 226

Query: 220 LAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATEADLSTLSKYRYQ---- 279
           L FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGA++ D+  L+K++++    
Sbjct: 227 LGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGD 286

Query: 280 -----VSNNPSPGD--GLMVPIETSSRYLTTEHVLLREDAECCICLSSYEDGVELHALPC 337
                V      GD  G+M    T S     EH L  EDAECCICLS+YED  EL  LPC
Sbjct: 287 TMKHTVDEEQGQGDSGGVMTECGTDS---PVEHALPHEDAECCICLSAYEDETELRELPC 346

[Close]

BLAST of Cp4.1LG01g18270 vs. TAIR10
Match: AT4G11680.1 (AT4G11680.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 304.3 bits (778), Expect = 9.5e-83
Identity = 157/307 (51.14%), Postives = 199/307 (64.82%), Query Frame = 1


Query: 40  RGTSMVVRETAARELEERRIDWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIR 99
           R  SM+VRETAA +LEER+ DW YSKPVV +DI WNLAFV + + VLI S DEKPN P+R
Sbjct: 82  REPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLR 141

Query: 100 LWILVYVAQCLVHSVLVWLEFRRRNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRSL 159
           +W++ Y  QC +H   V +E+RRR  RR        HP+       +N S+ +  S   L
Sbjct: 142 VWVVGYGIQCWLHMACVCVEYRRRRRRR--------HPEDGGGSGLTNSSSQQYVSLAQL 201

Query: 160 ------SGVARRCETVNTLVSLLWWLLGFYWVMAGGNLLLQNAPSLYWLAVVFLAFDVFF 219
                 S  A+  E+ NT+ S +WW++GFYWV AGG  L  ++P LYWL ++FL FDVFF
Sbjct: 202 EDRGETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFF 261

Query: 220 AIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATEADLSTLSKYRYQVSNN----PSP 279
            +FCV LAC+IG+A+CCCLPCIIAILYAVA QEGA++ D+  + K+R+  + N       
Sbjct: 262 VVFCVALACVIGLAVCCCLPCIIAILYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSGK 321

Query: 280 GDGLMVPIETSSRYLTTEHVLLREDAECCICLSSYEDGVELHALPCNHHFHYSCSTKWLK 337
             G+M    T S     E  L  EDAECCICL  YEDGVEL  LPCNHHFH +C  KWL 
Sbjct: 322 ARGIMTECGTDS---PIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLH 377

[Close]

BLAST of Cp4.1LG01g18270 vs. NCBI nr
Match: gi|659072757|ref|XP_008467019.1| (PREDICTED: E3 ubiquitin protein ligase RIE1 [Cucumis melo])

HSP 1 Score: 574.3 bits (1479), Expect = 1.4e-160
Identity = 285/337 (84.57%), Postives = 306/337 (90.80%), Query Frame = 1


Query: 1   MAASAQQTPFLRSRQP-SNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRI 60
           M   AQQ P L SRQP SN+D STSPIGPLA+LLGRATGRRGTSM+VRETAARELEERRI
Sbjct: 10  MDPPAQQIPLLPSRQPPSNSDASTSPIGPLALLLGRATGRRGTSMLVRETAARELEERRI 69

Query: 61  DWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLE 120
           DWGYSKPVVA+DI WNLAFVFVSLGVLI SV EKPNTPIRLWI+VY AQCLVH VLVW E
Sbjct: 70  DWGYSKPVVALDITWNLAFVFVSLGVLIRSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFE 129

Query: 121 FRRRNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRSLSGVARRCETVNTLVSLLWWL 180
           F+RRNARRA DMET Q  QPD  GY +NES+++DG  RSLS VA+RCE+VNTLVSL+WWL
Sbjct: 130 FKRRNARRARDMETQQQQQPD--GYVTNESDEDDGGQRSLSSVAKRCESVNTLVSLIWWL 189

Query: 181 LGFYWVMAGGNLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 240
            GFYWV+AGGN+L+QNAPSLYWLAVVFLAFDVFFA+FCVVLACLIGIALCCCLPCIIAIL
Sbjct: 190 FGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAIL 249

Query: 241 YAVAGQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPIETSSRYLTTEHVLLREDAECCI 300
           YAVAGQEGAT+ADLS L KYRY+VSN PSPGDGLMVP+ETSSRYLTTE VLLREDAECCI
Sbjct: 250 YAVAGQEGATDADLSMLPKYRYRVSNEPSPGDGLMVPVETSSRYLTTERVLLREDAECCI 309

Query: 301 CLSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL 337
           CLS YEDGVELHALPCNHHFHY+C TKWLKMNATCPL
Sbjct: 310 CLSPYEDGVELHALPCNHHFHYACITKWLKMNATCPL 344

[Close]

BLAST of Cp4.1LG01g18270 vs. NCBI nr
Match: gi|449465805|ref|XP_004150618.1| (PREDICTED: E3 ubiquitin protein ligase RIE1 [Cucumis sativus])

HSP 1 Score: 570.9 bits (1470), Expect = 1.5e-159
Identity = 282/337 (83.68%), Postives = 305/337 (90.50%), Query Frame = 1


Query: 1   MAASAQQTPFLRSRQP-SNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRI 60
           M   AQQ P L SRQP SN+D STSPIGPLA+LLGRATGRRGTSM+VRETAARELEERRI
Sbjct: 10  MDPPAQQIPLLPSRQPPSNSDASTSPIGPLALLLGRATGRRGTSMLVRETAARELEERRI 69

Query: 61  DWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLE 120
           DWGYSKPVVA+DI WNLAFVFVSLGVLIHSV EKPNTPIRLWI+VY AQCLVH VLVW E
Sbjct: 70  DWGYSKPVVALDITWNLAFVFVSLGVLIHSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFE 129

Query: 121 FRRRNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRSLSGVARRCETVNTLVSLLWWL 180
           F+RRNARRA DMET Q  +PD  GY +NES+++DG  RS S VA+RCE+VNT+VSL+WWL
Sbjct: 130 FKRRNARRARDMETQQQQEPD--GYVTNESDEDDGGQRSFSSVAKRCESVNTMVSLIWWL 189

Query: 181 LGFYWVMAGGNLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 240
            GFYWV+AGGN+L+QNAPSLYWLAVVFLAFDVFFA+FCVVLACLIGIALCCCLPCIIAIL
Sbjct: 190 FGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAIL 249

Query: 241 YAVAGQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPIETSSRYLTTEHVLLREDAECCI 300
           YAVAGQEGAT+ADLS L KYRY+VSN PSPGDGLMVP+ETSSRYLTTE VLL EDAECCI
Sbjct: 250 YAVAGQEGATDADLSMLPKYRYRVSNEPSPGDGLMVPVETSSRYLTTERVLLCEDAECCI 309

Query: 301 CLSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL 337
           CLS YEDGVELHALPCNHHFHY+C TKWLKMNATCPL
Sbjct: 310 CLSPYEDGVELHALPCNHHFHYACITKWLKMNATCPL 344

[Close]

BLAST of Cp4.1LG01g18270 vs. NCBI nr
Match: gi|590696813|ref|XP_007045267.1| (Zinc finger, C3HC4 type (RING finger) family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 451.1 bits (1159), Expect = 1.8e-123
Identity = 240/345 (69.57%), Postives = 266/345 (77.10%), Query Frame = 1


Query: 3   ASAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG 62
           AS    P LR RQP   D S +    LA+LLGRATGRRG SM+VRETAARELEERR DWG
Sbjct: 13  ASDSHAPLLRPRQP---DASAARPATLALLLGRATGRRGASMLVRETAARELEERRADWG 72

Query: 63  YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR 122
           YSKPVVA+D+ WN AFV VS+ +LI +VDE+ NTPIRLWI  Y  QCLVH VLVWLE+RR
Sbjct: 73  YSKPVVALDMLWNTAFVAVSVAMLICTVDERTNTPIRLWICGYALQCLVHVVLVWLEYRR 132

Query: 123 RNARR--AMDMETPQHPQPDIDGYFSNESNDE-DGSPRSLSG-----VARRCETVNTLVS 182
           RN RR  A D E       D     +N+S DE DG  RS  G     V +RCE+VNT+VS
Sbjct: 133 RNVRRTSARDEERGDATSGD-----ANDSEDEQDGIERSAFGSNQSSVTKRCESVNTMVS 192

Query: 183 LLWWLLGFYWVMAGGNLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 242
            LWW++GFYWV++GGN LLQNAP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC
Sbjct: 193 FLWWIVGFYWVVSGGNYLLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 252

Query: 243 IIAILYAVAGQEGATEADLSTLSKYRYQVSNN---PSPGDGLMVPIETSSRYLTTEHVLL 302
           IIAILYAVAGQEGA+EADLS L KYR+Q+ NN    S G G MVP+ETSS YL  E +LL
Sbjct: 253 IIAILYAVAGQEGASEADLSILPKYRFQIINNGGKASVGAGKMVPVETSSGYLANERILL 312

Query: 303 REDAECCICLSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL 337
            EDAECCICLSSYEDG +LHALPCNHHFH +C  KWLKMNATCPL
Sbjct: 313 PEDAECCICLSSYEDGADLHALPCNHHFHSACIVKWLKMNATCPL 349

[Close]

BLAST of Cp4.1LG01g18270 vs. NCBI nr
Match: gi|823158216|ref|XP_012478976.1| (PREDICTED: E3 ubiquitin protein ligase RIE1-like [Gossypium raimondii])

HSP 1 Score: 450.3 bits (1157), Expect = 3.1e-123
Identity = 234/344 (68.02%), Postives = 267/344 (77.62%), Query Frame = 1


Query: 1   MAASAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRID 60
           MAAS    P LR RQP   DGS +    LA LLGRATGRRG SM+VRETAARELEERR D
Sbjct: 1   MAASDPHAPLLRPRQP---DGSAARPVSLAHLLGRATGRRGASMLVRETAARELEERRAD 60

Query: 61  WGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEF 120
           WGYSKPVVA+D+ WN AFV VS+ +LI + DE PNTPIRLWI  Y  QCL+H VLVWLE+
Sbjct: 61  WGYSKPVVALDMLWNTAFVVVSVVMLISTADETPNTPIRLWICAYALQCLLHVVLVWLEY 120

Query: 121 RRRNARR--AMDMETPQHPQPDIDGYFSNESNDEDGS---PRSLSGVARRCETVNTLVSL 180
           RRRN+RR    D E  +    D+     N+S DE+ S     + S + +RCETVNT+ S 
Sbjct: 121 RRRNSRRISVTDEERGEAVSGDV-----NDSEDEEDSGLFGSNESSITKRCETVNTMASF 180

Query: 181 LWWLLGFYWVMAGGNLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 240
           LWW++GFYWV++GG++LLQNAP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI
Sbjct: 181 LWWIVGFYWVVSGGDILLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 240

Query: 241 IAILYAVAGQEGATEADLSTLSKYRYQVSNN---PSPGDGLMVPIETSSRYLTTEHVLLR 300
           IAILYA+  QEGA+EADLS L KY++Q+ NN   PS G G M+PIETSS YL  E +LL 
Sbjct: 241 IAILYAITEQEGASEADLSILPKYKFQIINNREKPSLGAGKMIPIETSSGYLANERILLP 300

Query: 301 EDAECCICLSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL 337
           EDAECCICLSSYEDGV+LHALPCNHHFH +C  KWLKMNATCPL
Sbjct: 301 EDAECCICLSSYEDGVDLHALPCNHHFHSTCIVKWLKMNATCPL 336

[Close]

BLAST of Cp4.1LG01g18270 vs. NCBI nr
Match: gi|743822730|ref|XP_011021769.1| (PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform X1 [Populus euphratica])

HSP 1 Score: 449.1 bits (1154), Expect = 6.8e-123
Identity = 232/337 (68.84%), Postives = 260/337 (77.15%), Query Frame = 1


Query: 9   PFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWGYSKPVV 68
           P LR RQ S T  + S    LAVLLGRATGRRG SM+VRETAAREL+ERR DWGYSKPVV
Sbjct: 10  PLLRPRQDSPTSPTASQT-TLAVLLGRATGRRGPSMLVRETAARELDERRADWGYSKPVV 69

Query: 69  AVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRRRNARRA 128
           A+D+ WN AFV VS+ +L+ +  E+PNTPIR+WI  Y  QCLVH +LVWLE+RRRN RR 
Sbjct: 70  ALDMLWNAAFVVVSVTMLVVTAKERPNTPIRIWICGYSLQCLVHVILVWLEYRRRNTRRG 129

Query: 129 MDMETPQHPQPDIDGYFSNESNDEDGSPRSL-----SGVARRCETVNTLVSLLWWLLGFY 188
            D+E+ Q     I G    ES DEDG  +       S   RRCE++NT+VS LWW++GFY
Sbjct: 130 RDVESQQQ---SIGGENVAESEDEDGDEQDRASPPRSSFTRRCESLNTMVSFLWWIVGFY 189

Query: 189 WVMAGGNLLLQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 248
           WV++GGN LLQNAP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA
Sbjct: 190 WVVSGGNALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVA 249

Query: 249 GQEGATEADLSTLSKYRYQVSNN----PSPGDGLMVPIETSSRYLTTEHVLLREDAECCI 308
           GQEGA+EADLS L KY+Y V  N    P  G G MVP+ETSS YL TE +LL EDAECCI
Sbjct: 250 GQEGASEADLSMLPKYKYLVMGNEEKRPRVGAGKMVPVETSSGYLATERILLPEDAECCI 309

Query: 309 CLSSYEDGVELHALPCNHHFHYSCSTKWLKMNATCPL 337
           CLS YEDG ELHALPCNHHFH +C  KWLKMNATCPL
Sbjct: 310 CLSPYEDGAELHALPCNHHFHATCIVKWLKMNATCPL 342

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g18270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIE1_ARATH	1.8e-107	58.94	E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1	[more]
RING1_ARATH	2.1e-84	50.60	E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 ...	[more]
RING2_ARATH	3.4e-82	49.22	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 ...	[more]
RING4_ARATH	1.7e-81	51.14	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 ...	[more]
RNF44_DANRE	3.9e-09	34.31	RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g18270 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GB66_CUCME	9.8e-161	84.57	Zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0KRG7_CUCSA	1.1e-159	83.68	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G561780 PE=4 SV=1	[more]
A0A061EFM2_THECC	1.2e-123	69.57	Zinc finger, C3HC4 type (RING finger) family protein isoform 1 OS=Theobroma caca...	[more]
A0A0D2NDG7_GOSRA	2.1e-123	68.02	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G157000 PE=4 SV=1	[more]
A0A067KPP8_JATCU	2.6e-121	66.96	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04760 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g18270 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68070.1	7.2e-115	63.42	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT2G01735.1	1.0e-108	58.94	RING-finger protein for embryogenesis	[more]
AT1G12760.1	1.2e-85	50.60	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT1G63170.1	1.9e-83	49.22	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT4G11680.1	9.5e-83	51.14	Zinc finger, C3HC4 type (RING finger) family protein	[more]

BLAST of Cp4.1LG01g18270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072757\|ref\|XP_008467019.1\|	1.4e-160	84.57	PREDICTED: E3 ubiquitin protein ligase RIE1 [Cucumis melo]	[more]
gi\|449465805\|ref\|XP_004150618.1\|	1.5e-159	83.68	PREDICTED: E3 ubiquitin protein ligase RIE1 [Cucumis sativus]	[more]
gi\|590696813\|ref\|XP_007045267.1\|	1.8e-123	69.57	Zinc finger, C3HC4 type (RING finger) family protein isoform 1 [Theobroma cacao]	[more]
gi\|823158216\|ref\|XP_012478976.1\|	3.1e-123	68.02	PREDICTED: E3 ubiquitin protein ligase RIE1-like [Gossypium raimondii]	[more]
gi\|743822730\|ref\|XP_011021769.1\|	6.8e-123	68.84	PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform X1 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g18270.1	Cp4.1LG01g18270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 296..336 score: 1.2
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 297..337 score: 0.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 297..336 score: 10
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 293..336 score: 1.7
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 3..263 score: 4.7E-174coord: 286..336 score: 4.7E
None	No IPR available	PANTHER	PTHR14155:SF73	SUBFAMILY NOT NAMED	coord: 3..263 score: 4.7E-174coord: 286..336 score: 4.7E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 283..336 score: 3.24

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g18270	Cucsa.012230	Cucumber (Gy14) v1	cgycpeB0523
Cp4.1LG01g18270	CmaCh15G009810	Cucurbita maxima (Rimu)	cmacpeB319
Cp4.1LG01g18270	CmaCh04G021030	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g18270	CmoCh04G022050	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g18270	CmoCh15G010280	Cucurbita moschata (Rifu)	cmocpeB281
Cp4.1LG01g18270	Cla003957	Watermelon (97103) v1	cpewmB442
Cp4.1LG01g18270	Csa5G561780	Cucumber (Chinese Long) v2	cpecuB424
Cp4.1LG01g18270	ClCG01G006570	Watermelon (Charleston Gray)	cpewcgB373
Cp4.1LG01g18270	CSPI05G19250	Wild cucumber (PI 183967)	cpecpiB444
Cp4.1LG01g18270	Lsi09G006900	Bottle gourd (USVL1VR-Ls)	cpelsiB315
Cp4.1LG01g18270	CsaV3_5G028180	Cucumber (Chinese Long) v3	cpecucB0547
Cp4.1LG01g18270	Bhi12G000822	Wax gourd	cpewgoB0494
Cp4.1LG01g18270	CsGy5G018770	Cucumber (Gy14) v2	cgybcpeB634
Cp4.1LG01g18270	Carg26052	Silver-seed gourd	carcpeB0600

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g18270	Cp4.1LG13g03460	Cucurbita pepo (Zucchini)	cpecpeB200

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g18270	Cucumber (Gy14) v1	cgycpeB0737
Cp4.1LG01g18270	Cucurbita maxima (Rimu)	cmacpeB310
Cp4.1LG01g18270	Cucurbita moschata (Rifu)	cmocpeB273
Cp4.1LG01g18270	Wild cucumber (PI 183967)	cpecpiB422
Cp4.1LG01g18270	Cucumber (Chinese Long) v2	cpecuB443
Cp4.1LG01g18270	Bottle gourd (USVL1VR-Ls)	cpelsiB311
Cp4.1LG01g18270	Watermelon (Charleston Gray)	cpewcgB370
Cp4.1LG01g18270	Watermelon (97103) v1	cpewmB440
Cp4.1LG01g18270	Melon (DHL92) v3.5.1	cpemeB347
Cp4.1LG01g18270	Cucumber (Gy14) v2	cgybcpeB651
Cp4.1LG01g18270	Melon (DHL92) v3.6.1	cpemedB407
Cp4.1LG01g18270	Wax gourd	cpewgoB0491