Carg26052 (gene) Silver-seed gourd

Overview
NameCarg26052
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionE3 ubiquitin-protein ligase family
LocationCucurbita_argyrosperma_scaffold_258 : 143528 .. 148848 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCCGCTCAACAGACTCCTTTCTTACGCTCCCGTCAGCCCTCCAACACTGACGGCTCTACTTCCCCCATCGGCCCCCTCGCTGTTCTCTTGGGCCGTGCCACTGGCCGCCGTGGAACTTCTATGGTAGTACGAGAGACGGCGGCACGTGAACTTGAAGAGCGCCGCATCGATTGGGGCTACTCCAAGCCGGTTGTGGCGGTTGACATTGCGTGGAATTTGGCTTTCGTTTTCGTTTCGTTGGGTGTGCTTATTCACTCGGTCGATGAAAAACCCAATACGCCAATTCGGCTTTGGATTTTAGTTTATGTGGCTCAGTGTTTGGTGCACTCTGTGCTTGTGTGGTTAGAGTTTAGAAGGAGGAATGCGAGGAGGGCTATGGATATGGAGACGCCGCAACACCCGCAACCTGATATTGACGGATATTTTTCTAATGAAAGCAATGACGAAGATGGTAGCCCGAGGAATCTGTCCGGGTGAGTAAAATTTCAGTCCTCTCTGCTAAGATCAAGTTGTGATGGTCTTGAGTCCGAACTTTGGTTCTATTTGCTGAAATTCGATATGGGTTTGAGCTCTATTTGATAGAATTTTTTCATTTGCTTATCAAAATGGCTTTTCTGACTTTAATTTTGTGTTCATTGTATGGATGACCAGGCAATTTTGTGTTCATTTCTGGCTTCTTAAATGTTTAACCCTGCATTCTTTTTGGAATCATAAATATTTGCCGCTTCTGCGTGCTTTTCTATTAATATGAACAGAACAGTTAAATTCAAGGATAAAGTACAGTGATTTGCAGGGGTTATATATAGATAGGATAAGAGACTGGAGAAATTTTCATTAGATCGAGCAAAGGAAGAAGGGTAACGAGAAATCAACCAAGTCCCTTTTTCTTTAGATTAAGAAAAATCCATTACATACTTCTATTAGTTCACAAATATAGCATTAATTATGTTCTTCCCTTTCCATAACTAAAAATTGAATTAGACCCTTTCTGCAATTTTCTGTTTTACTTTCACCTTCAATTCTTTCCAACACCTATTTATGGTCCCATCTTCAATTGAATTTGTTATCGTATCTTGCTTCAGTTATAAATTACTGATTTGATGATTTTTAAGTTGGTAGCATGTCATTGACTTGGTGGTATGGATGTGCAGTGTTGCCAAAAGATGTGAGACAGTGAACACCTTGGTATCGTTAATTTGGTGGTTACTTGGCTTTTATTGGGTCATGGCTGGTGGTAACCTCCTCCTGCAGAATGCTCCATCTTTATACTGGTATGATTTTGAACCGTCGCGATGCTGGCTGCATATCCTTCTTATGTTTTTATTATAAAGGAAAAATGTATTTTTTTTTTTTCTTTTGATTGCTTGTAATGTGTTTCACATTGAAGGAAATCTGTTAACATTTTCCTGTTCTTCCCCCTCTATTATTGAATTTCTGATTATTCTAGTCATGTCATGAATCATTTTCTAGATGGCATTTGATGTTCAGTTTCCTTCATTCTCAAATGTCTTAAATTCCTTCAAAATTAACCTGGGGGTGGTAAGCAGGTTGATTTTTGGCCCAAAAGGACTGATGAAATTTATTCAAGTTAACCTGCTCGGACTATTTTTTAGTTTTTCACTCTAGCAATTCAAAATGCCTAATAAGCATTGTTCAGGTCGACATTACTGACTCATTTTCAGATCGTGTCGATGGCTGTTTAAGTTTGAGCTTGCACCCTTAAACTAACTAGCTTTTATGTGATTTTTACAATTTGTAAGAGGCCAATGAATTCCGCTCTTCCTTTGGGGGGATAGAATTCCGCTCTTCCTTTGGGGGGATAGTAATCGTTAATTATACTTTTAGTTAGTCCCTCCCTCAAAAGCTCTTTTAATTAAAAGCCATCAATCTAATAAATAAGCTAATAAAATTTCTGACATGGAATCAGTAATGAGCAAACATATCCTTCCTTCTTCCGTTGCTGAAAATCAAATGGCTTTGGTGGCAAATAGACCAATTCTGTATGCTTATCTGATTGCAAATGAAGTAATTGATGTTTGGAATTTATCTCATAAGGAAGGTGTTGTCCTTAAACTAGATTTGGAGAGCTTTGATAAAGTAGATTGGGATTTTCTGGATGTGATTTTACTGGCAAAAGGTTGTGGGCACAGATGGAGGAAACGGTTGTATCTCTATTGTCAGTTTTTTATTATTGTTAATGGGCTACTTAAAGGTAAAATCATATTGACATGGGGTATTAGATAATAGGATCCTCTTTCTCCTTTCTTTTCATTTTGGTTTCTGATTGTCTCAGTCACATGTTATCACATGATGCTGGTTTGGGAAGAATTTTGACTTATTCGGTCGGTAAATCTCTTGTTCGATTAACTCCTTTGCGATGATGATACGCTATAATTCTTGGTTTTTGTTTCGAAAATGTAAAATTTAGAGGGTTCATCGAAATGATTGAATTGGATTGGTTGACGACAATGTTTGGATGTAGACATGGGTCTTCTCCTTCTACTTATCTTGGTGTTCCGTTGGGTGGTAATGCGAAGACTTTCCTTTTTTGGCAGCCTGTATTTGAAAAAATTCATCATAAGTTACATAGTTGGAAATATGCCTTCTTTTCGAGAGGTGGTCTCCATACCCTTATTCATGCCACTCTTTCTAATGTGCCTACTTATTACCTTTCTTTATTCAAATTCAAATTACCATCTAAGGGTGCTAAAACTCTGGACAAGCTGCTTAGAGTCTTCTTTTGGGAAGGTTCTAGAGGAGATGGTGGAATGCATAACATTAATTAGGAGGAGAGACTGCTCCCTCAACTTTCAGGGCAGTTAGGTATTGGTCATTTTTCAGGTTCAAAATTTGTCTCCGTTATGGAAATGGATTTGGAGGTTTCTGCACGAAAAAGATTCACTTTGGCACAATATCATTGTTGGTAAATTCTATCAATCAAAGGATATTGGTTTGTGGCCTAAGGCTGTTATGAGGGATTGTTTTAAATAATTGTGGTGTGCTGTTTCTTCTACTATTGACCTTATTGCCAATCGCGTCCAGAGATGTATTGGAAATGGTATTCACACTTCTTTTTGGCATGATTCTTGGCTAATTTGTTGGAAGATTGCTATGGCTTTTCCTAAACTTTGTTGGTTAACAAATAGGCCTCATGCTACAGTAGCGCAATTATGGAATAGTTCAAATGCCGCCTGGGGTTTGGGGCTTCATCACAAACTTACTGATCCGGAGGTTATTGAATTGGCTCATCTCTCCAATCATCTATTGGTCACTTGGCTCTTCACAAATTGTCACAGTAAAGTCTTTCATGAGTGATCTAGTGCATGACATTATCCCTAAATCGAACCACCTTTACTTGGTGGTTTGGATAGATGTTTATCCTAAGAAAATTAAAATTTTCCTATGGGAGCTTAGTCATGGTACTATCAATAAAGCTGATCATTTAAGGAGGATGCTTCATTTTGTCTTATCACAACATTCTATTATGTTATTTGTTGTTCCAGTTCAGATTTTCCTTGTCATCCATTCGCTCATTGCTCTTTTGCTTCATAATTTTGTGCAACTATGCTTGATGCTTTTGAATGGTCCACGGGCTTACCAAACACCTTTCACTAACCTGTAATGAGCATAAAGGACGTTCCGGGGTTTTTTGTTTTTTTTTCCTTCCCCTGTTTTAAAATGAAGGAACTACCCCAATGGTGACTCTGGTGATTAGAGCTTGGAGTGTTTGGAGGTAACCTCTGGATAAAACTTAATGATGTAGGGCAGCTACTTGTTGGAATAATCAATGGGAAAACCCTGTGTTTTTTATGTTGGGTTGCTATGTTCTTTCATTTTGTTCTGTTTTTCAGATTTGGCTTTGGTTGCCGTTACTCTTGATTTGTTTAAAACTTGTTATTAGGCTCTTACAAGTAATTATTAGCGTTAGTCCTACTAGCCGTTGACTGGTTGTTAGAGCTAGTATGTAAGTTTTGGACTGAATCTTTTAATAGAATTCCTTTTCATTGGTTCTACATTGCTTGGTAACATAAAATCCTTGACATTTGCGGCCTTTATGGGGGTAGATGTAGATGATGAGCATAATACAAGGATTTGGAACCTTCATATGCTGGTTATTTAAAAAAAAAAAAGAAGGGATCCAATCAAATTTTAAGTGCTTTTATTAGTATTATTTGGTTGGGAGGGGGGCATGCAGATTTTTGTACATCATTTATCTGTTCCAAATTCAAATGAAAGACTTTCATGGTTTCTAATTCTGAGTTCTTGCAGGCTGGCTGTCGTATTTCTGGCATTTGATGTGTTCTTTGCCATCTTTTGTGTTGTTTTGGCATGTTTGATTGGAATAGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTTTATGCTGTTGCAGGCCAGGTAAGAGGAAATCCCGGTTTTCATGGTTGCTTCAGAGATGTTAGGCAGAATGAAGGCACATGAAACCTGCTAACTTCTTTCTTTCCTTTTTCCCTTCACATGAATCTCAGCAGGAAGGTGCAACTGAGGCAGATTTAAGTACTCTTTCTAAGTATAGATATCAAGTATCCAACAATCCTTCTCCCGGCGACGGGTTGATGGTTCCAATGGAAACAAGCAGCCGATACTTGACGACTGAACATGTTCTATTACGAGAGGATGCGGTAAAGTTAATTGTTTTATCGTTCTTTATAAGTTTGTGTTCCTGTTAGTCACACTGCTTCAGTATCATACATCTAATGTGTACATATAAGAGATAGAACTACATAGATAATGTGTGTACGGTAGGTAGAAGGAAATCTGAAGGTTACTAAAGATTGGAAAGAGAGTAGGGACTGAATTTATAATGTAACGCATCCCACGTCGGTTGGAAAGGGGAACGAAGCATTCTTCGTAGAGGTGTGAAAATCTCTCCCTAATAAACGCGTTTTAAAAACCTTGAGGGGAAGCCTAAAAGGGAAAGCCTAAAGAGGACAATATCTGCTAGCGATGAGCTTGAGTTGTTACATGAAGAGGAAGAGTATTCAATTTGATAACCATCGTACCTTTCTCTTCTTTCTTGAACCAATTGAGTTTTATCTCTCTTCTTTCTTGAACCAATTTCGTCTAAAAACTCAATGTTCATGCATAATCTTTGTGCCCTTCCTTTCAGGAGTGTTGTATATGTCTTAGTTCATATGAGGACGGAGTCGAGCTTCATGCTCTTCCCTGCAACCACCATTTTCATTACACGTGTAGCGCAAAATGGCTGAAGATGAATGCAACCTGCCCTCTGTGCAAGTACAACATATTAAAAAACTGTGAACCTGTGTAA

mRNA sequence

ATGGCGGCCGCTCAACAGACTCCTTTCTTACGCTCCCGTCAGCCCTCCAACACTGACGGCTCTACTTCCCCCATCGGCCCCCTCGCTGTTCTCTTGGGCCGTGCCACTGGCCGCCGTGGAACTTCTATGGTAGTACGAGAGACGGCGGCACGTGAACTTGAAGAGCGCCGCATCGATTGGGGCTACTCCAAGCCGGTTGTGGCGGTTGACATTGCGTGGAATTTGGCTTTCGTTTTCGTTTCGTTGGGTGTGCTTATTCACTCGGTCGATGAAAAACCCAATACGCCAATTCGGCTTTGGATTTTAGTTTATGTGGCTCAGTGTTTGGTGCACTCTGTGCTTGTGTGGTTAGAGTTTAGAAGGAGGAATGCGAGGAGGGCTATGGATATGGAGACGCCGCAACACCCGCAACCTGATATTGACGGATATTTTTCTAATGAAAGCAATGACGAAGATGGTAGCCCGAGGAATCTGTCCGGTGTTGCCAAAAGATGTGAGACAGTGAACACCTTGGTATCGTTAATTTGGTGGTTACTTGGCTTTTATTGGGTCATGGCTGGTGGTAACCTCCTCCTGCAGAATGCTCCATCTTTATACTGGCCTCATGCTACAGTAGCGCAATTATGGAATAGTTCAAATGCCGCCTGGGGTTTGGGGCTTCATCACAAACTTACTGATCCGGAGATTTTCCTTGTCATCCATTCGCTCATTGCTCTTTTGCTTCATAATTTTGTGCAACTATGCTTGATGCTTTTGAATGGTCCACGGGCTTACCAAACACCTTTCACTAACCTGCTGGCTGTCGTATTTCTGGCATTTGATGTGTTCTTTGCCATCTTTTGTGTTGTTTTGGCATGTTTGATTGGAATAGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTTTATGCTGTTGCAGGCCAGCAGGAAGGTGCAACTGAGGCAGATTTAAGTACTCTTTCTAAGTATAGATATCAAGTATCCAACAATCCTTCTCCCGGCGACGGGTTGATGGTTCCAATGGAAACAAGCAGCCGATACTTGACGACTGAACATGTTCTATTACGAGAGGATGCGGAGTGTTGTATATGTCTTAGTTCATATGAGGACGGAGTCGAGCTTCATGCTCTTCCCTGCAACCACCATTTTCATTACACGTGTAGCGCAAAATGGCTGAAGATGAATGCAACCTGCCCTCTGTGCAAGTACAACATATTAAAAAACTGTGAACCTGTGTAA

Coding sequence (CDS)

ATGGCGGCCGCTCAACAGACTCCTTTCTTACGCTCCCGTCAGCCCTCCAACACTGACGGCTCTACTTCCCCCATCGGCCCCCTCGCTGTTCTCTTGGGCCGTGCCACTGGCCGCCGTGGAACTTCTATGGTAGTACGAGAGACGGCGGCACGTGAACTTGAAGAGCGCCGCATCGATTGGGGCTACTCCAAGCCGGTTGTGGCGGTTGACATTGCGTGGAATTTGGCTTTCGTTTTCGTTTCGTTGGGTGTGCTTATTCACTCGGTCGATGAAAAACCCAATACGCCAATTCGGCTTTGGATTTTAGTTTATGTGGCTCAGTGTTTGGTGCACTCTGTGCTTGTGTGGTTAGAGTTTAGAAGGAGGAATGCGAGGAGGGCTATGGATATGGAGACGCCGCAACACCCGCAACCTGATATTGACGGATATTTTTCTAATGAAAGCAATGACGAAGATGGTAGCCCGAGGAATCTGTCCGGTGTTGCCAAAAGATGTGAGACAGTGAACACCTTGGTATCGTTAATTTGGTGGTTACTTGGCTTTTATTGGGTCATGGCTGGTGGTAACCTCCTCCTGCAGAATGCTCCATCTTTATACTGGCCTCATGCTACAGTAGCGCAATTATGGAATAGTTCAAATGCCGCCTGGGGTTTGGGGCTTCATCACAAACTTACTGATCCGGAGATTTTCCTTGTCATCCATTCGCTCATTGCTCTTTTGCTTCATAATTTTGTGCAACTATGCTTGATGCTTTTGAATGGTCCACGGGCTTACCAAACACCTTTCACTAACCTGCTGGCTGTCGTATTTCTGGCATTTGATGTGTTCTTTGCCATCTTTTGTGTTGTTTTGGCATGTTTGATTGGAATAGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTTTATGCTGTTGCAGGCCAGCAGGAAGGTGCAACTGAGGCAGATTTAAGTACTCTTTCTAAGTATAGATATCAAGTATCCAACAATCCTTCTCCCGGCGACGGGTTGATGGTTCCAATGGAAACAAGCAGCCGATACTTGACGACTGAACATGTTCTATTACGAGAGGATGCGGAGTGTTGTATATGTCTTAGTTCATATGAGGACGGAGTCGAGCTTCATGCTCTTCCCTGCAACCACCATTTTCATTACACGTGTAGCGCAAAATGGCTGAAGATGAATGCAACCTGCCCTCTGTGCAAGTACAACATATTAAAAAACTGTGAACCTGTGTAA

Protein sequence

MAAAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRRRNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWLLGFYWVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSLIALLLHNFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPMETSSRYLTTEHVLLREDAECCICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILKNCEPV
Homology
[Close]
BLAST of Carg26052 vs. NCBI nr
Match: XP_022960124.1 (E3 ubiquitin protein ligase RIE1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 667.5 bits (1721), Expect = 2.8e-188
Identity = 342/412 (83.01%), Postives = 344/412 (83.50%), Query Frame = 0 

Query: 2   AAAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG 61
           A+AQQTPFLRSRQPSNT GSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG
Sbjct: 3   ASAQQTPFLRSRQPSNTGGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG 62

Query: 62  YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR 121
           YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR
Sbjct: 63  YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR 122

Query: 122 RNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWLLGF 181
           RNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWLLGF
Sbjct: 123 RNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWLLGF 182

Query: 182 YWVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSLIALLL 241
           YWVMAGGNLLLQNAPSLYW                                         
Sbjct: 183 YWVMAGGNLLLQNAPSLYW----------------------------------------- 242

Query: 242 HNFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 301
                                   LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA
Sbjct: 243 ------------------------LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 302

Query: 302 ILYAVAGQQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPMETSSRYLTTEHVLLREDAE 361
           ILYAVAGQQEGAT+ADLSTLSKYRYQVSNNPSPGDGLMVPMETSSRYLTTEHVLLREDAE
Sbjct: 303 ILYAVAGQQEGATDADLSTLSKYRYQVSNNPSPGDGLMVPMETSSRYLTTEHVLLREDAE 349

Query: 362 CCICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILKNCEPV 414
           CCICLSSYEDGVELHALPCNHHFHY CS KWLKMNATCPLCKYNILKNCEPV
Sbjct: 363 CCICLSSYEDGVELHALPCNHHFHYACSTKWLKMNATCPLCKYNILKNCEPV 349

[Close]
BLAST of Carg26052 vs. NCBI nr
Match: XP_023541075.1 (E3 ubiquitin protein ligase RIE1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 666.0 bits (1717), Expect = 8.3e-188
Identity = 340/412 (82.52%), Postives = 345/412 (83.74%), Query Frame = 0 

Query: 2   AAAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG 61
           A+AQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG
Sbjct: 3   ASAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG 62

Query: 62  YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR 121
           YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR
Sbjct: 63  YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR 122

Query: 122 RNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWLLGF 181
           RNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPR+LSGVA+RCETVNTLVSL+WWLLGF
Sbjct: 123 RNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRSLSGVARRCETVNTLVSLLWWLLGF 182

Query: 182 YWVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSLIALLL 241
           YWVMAGGNLLLQNAPSLYW                                         
Sbjct: 183 YWVMAGGNLLLQNAPSLYW----------------------------------------- 242

Query: 242 HNFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 301
                                   LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA
Sbjct: 243 ------------------------LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 302

Query: 302 ILYAVAGQQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPMETSSRYLTTEHVLLREDAE 361
           ILYAVAGQQEGATEADLSTLSKYRYQVSNNPSPGDGLMVP+ETSSRYLTTEHVLLREDAE
Sbjct: 303 ILYAVAGQQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPIETSSRYLTTEHVLLREDAE 349

Query: 362 CCICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILKNCEPV 414
           CCICLSSYEDGVELHALPCNHHFHY CS KWLKMNATCPLCKYNILKNCEPV
Sbjct: 363 CCICLSSYEDGVELHALPCNHHFHYACSTKWLKMNATCPLCKYNILKNCEPV 349

[Close]
BLAST of Carg26052 vs. NCBI nr
Match: XP_022960133.1 (E3 ubiquitin protein ligase RIE1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 661.0 bits (1704), Expect = 2.7e-186
Identity = 341/412 (82.77%), Postives = 343/412 (83.25%), Query Frame = 0 

Query: 2   AAAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG 61
           A+AQQTPFLRSRQPSNT GSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG
Sbjct: 3   ASAQQTPFLRSRQPSNTGGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG 62

Query: 62  YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR 121
           YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR
Sbjct: 63  YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR 122

Query: 122 RNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWLLGF 181
           RNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWLLGF
Sbjct: 123 RNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWLLGF 182

Query: 182 YWVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSLIALLL 241
           YWVMAGGNLLLQNAPSLYW                                         
Sbjct: 183 YWVMAGGNLLLQNAPSLYW----------------------------------------- 242

Query: 242 HNFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 301
                                   LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA
Sbjct: 243 ------------------------LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 302

Query: 302 ILYAVAGQQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPMETSSRYLTTEHVLLREDAE 361
           ILYAVAG QEGAT+ADLSTLSKYRYQVSNNPSPGDGLMVPMETSSRYLTTEHVLLREDAE
Sbjct: 303 ILYAVAG-QEGATDADLSTLSKYRYQVSNNPSPGDGLMVPMETSSRYLTTEHVLLREDAE 348

Query: 362 CCICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILKNCEPV 414
           CCICLSSYEDGVELHALPCNHHFHY CS KWLKMNATCPLCKYNILKNCEPV
Sbjct: 363 CCICLSSYEDGVELHALPCNHHFHYACSTKWLKMNATCPLCKYNILKNCEPV 348

[Close]
BLAST of Carg26052 vs. NCBI nr
Match: XP_023541082.1 (E3 ubiquitin protein ligase RIE1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 659.4 bits (1700), Expect = 7.8e-186
Identity = 339/412 (82.28%), Postives = 344/412 (83.50%), Query Frame = 0 

Query: 2   AAAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG 61
           A+AQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG
Sbjct: 3   ASAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG 62

Query: 62  YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR 121
           YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR
Sbjct: 63  YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR 122

Query: 122 RNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWLLGF 181
           RNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPR+LSGVA+RCETVNTLVSL+WWLLGF
Sbjct: 123 RNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRSLSGVARRCETVNTLVSLLWWLLGF 182

Query: 182 YWVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSLIALLL 241
           YWVMAGGNLLLQNAPSLYW                                         
Sbjct: 183 YWVMAGGNLLLQNAPSLYW----------------------------------------- 242

Query: 242 HNFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 301
                                   LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA
Sbjct: 243 ------------------------LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 302

Query: 302 ILYAVAGQQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPMETSSRYLTTEHVLLREDAE 361
           ILYAVAG QEGATEADLSTLSKYRYQVSNNPSPGDGLMVP+ETSSRYLTTEHVLLREDAE
Sbjct: 303 ILYAVAG-QEGATEADLSTLSKYRYQVSNNPSPGDGLMVPIETSSRYLTTEHVLLREDAE 348

Query: 362 CCICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILKNCEPV 414
           CCICLSSYEDGVELHALPCNHHFHY CS KWLKMNATCPLCKYNILKNCEPV
Sbjct: 363 CCICLSSYEDGVELHALPCNHHFHYACSTKWLKMNATCPLCKYNILKNCEPV 348

[Close]
BLAST of Carg26052 vs. NCBI nr
Match: XP_022990085.1 (E3 ubiquitin protein ligase RIE1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 656.0 bits (1691), Expect = 8.6e-185
Identity = 336/412 (81.55%), Postives = 344/412 (83.50%), Query Frame = 0 

Query: 2   AAAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG 61
           A+AQQTPFLRSRQPSNT GSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRID G
Sbjct: 3   ASAQQTPFLRSRQPSNTGGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDLG 62

Query: 62  YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR 121
           YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR
Sbjct: 63  YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR 122

Query: 122 RNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWLLGF 181
           RNARR+MDMETPQHPQPDIDGY +NESNDEDGSPRNLSGVA+RCET+NTLVSLIWWLLGF
Sbjct: 123 RNARRSMDMETPQHPQPDIDGYVANESNDEDGSPRNLSGVARRCETLNTLVSLIWWLLGF 182

Query: 182 YWVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSLIALLL 241
           YWVMAGGNLLLQNAPSLYW                                         
Sbjct: 183 YWVMAGGNLLLQNAPSLYW----------------------------------------- 242

Query: 242 HNFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 301
                                   LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA
Sbjct: 243 ------------------------LAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 302

Query: 302 ILYAVAGQQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPMETSSRYLTTEHVLLREDAE 361
           ILYAVAGQQEGAT+ADLSTLSKYRYQVSNNPSPGDGLMVP+ETSSRYLTTEHVLLREDAE
Sbjct: 303 ILYAVAGQQEGATDADLSTLSKYRYQVSNNPSPGDGLMVPIETSSRYLTTEHVLLREDAE 349

Query: 362 CCICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILKNCEPV 414
           CCICLSSYEDGVELHALPCNHHFHYTCS+KWLKMNATCPLCKYNILKNCEPV
Sbjct: 363 CCICLSSYEDGVELHALPCNHHFHYTCSSKWLKMNATCPLCKYNILKNCEPV 349

[Close]
BLAST of Carg26052 vs. TAIR10
Match: AT1G68070.1 (Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 394.0 bits (1011), Expect = 1.1e-109
Identity = 223/409 (54.52%), Postives = 259/409 (63.33%), Query Frame = 0 

Query: 7   TPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWGYSKPV 66
           TP LRSRQ S       P+  +AVLL RA+GRRG SMVVRETAA+ELEERR DWGYSKPV
Sbjct: 14  TPLLRSRQSS---PRRQPV--IAVLLNRASGRRGASMVVRETAAQELEERRADWGYSKPV 73

Query: 67  VAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRRRNAR- 126
           VA+D+ WN AFV V++ +L+   +EKPN PIR+WI  Y  QCLVH VLVWLEFR+RNAR 
Sbjct: 74  VALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRKRNARS 133

Query: 127 RAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWLLGFYWVM 186
           R  D+E  Q    D        S DED   R LS   K CE++NT++S +WW++GFYW++
Sbjct: 134 RPGDLEAAQATNQD--------SEDEDNDERFLS--TKTCESMNTIISFVWWIVGFYWLV 193

Query: 187 AGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSLIALLLHNFV 246
           +GG++LLQNA  LYW                                             
Sbjct: 194 SGGDILLQNATHLYW--------------------------------------------- 253

Query: 247 QLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYA 306
                               L  VFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA+LYA
Sbjct: 254 --------------------LTFVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALLYA 313

Query: 307 VAGQQEGATEADLSTLSKYRYQVSNN---PSPGDGLMVPMETSSRYLTTEHVLLREDAEC 366
           VAG QEGA+EADLS L KYR+   NN    S G G M+P++ +S  L  E VLL EDA+C
Sbjct: 314 VAG-QEGASEADLSILPKYRFHTMNNDEKQSDGGGKMIPVDAASENLGNERVLLPEDADC 341

Query: 367 CICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILKNCE 412
           CICLSSYEDG EL +LPCNHHFH TC  KWLKMNATCPLCK+NILK  E
Sbjct: 374 CICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNILKGNE 341

[Close]
BLAST of Carg26052 vs. TAIR10
Match: AT2G01735.1 (RING-finger protein for embryogenesis)

HSP 1 Score: 373.2 bits (957), Expect = 2.0e-103
Identity = 209/413 (50.61%), Postives = 250/413 (60.53%), Query Frame = 0 

Query: 2   AAAQQTPFLRSRQPSNTDGSTSPIGP--LAVLLGRATGRRGTSMVVRETAARELEERRID 61
           A  Q  P LR R   +   S+S   P  LAVLLGR TG R  SM+VRETAAR LEERRID
Sbjct: 11  ARDQHAPLLRPRHDGSFSSSSSSARPTALAVLLGRITGHRAPSMLVRETAARALEERRID 70

Query: 62  WGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEF 121
           WGYSKPVVA DI WN A V  S  +L+ +V+E+PN PIR+WI VY  QCL H VLVW E+
Sbjct: 71  WGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEY 130

Query: 122 RRRNA-RRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWL 181
            RRN+ RRA D+E+  H   +I+  +  +S+D            KRCE++NT++S IWW+
Sbjct: 131 WRRNSTRRARDLESYDHEDYNIEYDYEQDSDDNS----TTYSFVKRCESINTVISFIWWI 190

Query: 182 LGFYWVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSLIA 241
           +GFYWV+ GG+ LL  AP+LYW                                      
Sbjct: 191 IGFYWVVEGGDKLLGEAPNLYW-------------------------------------- 250

Query: 242 LLLHNFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 301
                                      L+V+FLA DVFFA+FCVVLACL+GIALCCCLPC
Sbjct: 251 ---------------------------LSVIFLAIDVFFAVFCVVLACLVGIALCCCLPC 310

Query: 302 IIAILYAVAGQQEGATEADLSTLSKYRYQV--SNNPS-PGDGLMVPMETSSRYLTTEHVL 361
           IIA+LYAVAG  EG +EA+L  L  Y+++   SN  +  G G MVP+  +   L TE  L
Sbjct: 311 IIALLYAVAG-TEGVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTL 353

Query: 362 LREDAECCICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILK 409
           L EDA+CCICLSSYEDG ELHALPCNHHFH TC  KWLKM ATCPLCKYNILK
Sbjct: 371 LAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILK 353

[Close]
BLAST of Carg26052 vs. TAIR10
Match: AT4G11680.1 (Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 274.6 bits (701), Expect = 9.7e-74
Identity = 158/375 (42.13%), Postives = 197/375 (52.53%), Query Frame = 0 

Query: 39  RGTSMVVRETAARELEERRIDWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIR 98
           R  SM+VRETAA +LEER+ DW YSKPVV +DI WNLAFV + + VLI S DEKPN P+R
Sbjct: 82  REPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLR 141

Query: 99  LWILVYVAQCLVHSVLVWLEFRRRNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNL 158
           +W++ Y  QC +H   V +E+                        + + +  ED      
Sbjct: 142 VWVVGYGIQCWLHMACVCVEYXXXXXXXXXXXXXXXXXXXXXXXXYVSLAQLEDRG--ET 201

Query: 159 SGVAKRCETVNTLVSLIWWLLGFYWVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGL 218
           S  AK  E+ NT+ S IWW++GFYWV AGG  L  ++P LYW                  
Sbjct: 202 SNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYW------------------ 261

Query: 219 GLHHKLTDPEIFLVIHSLIALLLHNFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFA 278
                                                          L ++FL FDVFF 
Sbjct: 262 -----------------------------------------------LCIIFLGFDVFFV 321

Query: 279 IFCVVLACLIGIALCCCLPCIIAILYAVAGQQEGATEADLSTLSKYRYQVSNN----PSP 338
           +FCV LAC+IG+A+CCCLPCIIAILYAVA  QEGA++ D+  + K+R+  + N       
Sbjct: 322 VFCVALACVIGLAVCCCLPCIIAILYAVA-DQEGASKNDIDQMPKFRFTKTGNVEKLSGK 381

Query: 339 GDGLMVPMETSSRYLTTEHVLLREDAECCICLSSYEDGVELHALPCNHHFHYTCSAKWLK 398
             G+M    T S     E  L  EDAECCICL  YEDGVEL  LPCNHHFH TC  KWL 
Sbjct: 382 ARGIMTECGTDS---PIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLH 385

Query: 399 MNATCPLCKYNILKN 410
           +N+ CPLCK+NILKN
Sbjct: 442 INSRCPLCKFNILKN 385

[Close]
BLAST of Carg26052 vs. TAIR10
Match: AT1G12760.1 (Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 271.9 bits (694), Expect = 6.3e-73
Identity = 168/410 (40.98%), Postives = 213/410 (51.95%), Query Frame = 0 

Query: 29  AVLLGRA-TGR--RGTSMVVRETAARELEERRIDWGYSKPVVAVDIAWNLAFVFVSLGVL 88
           A  L RA +GR  R  SM+VRE AA +LEER+ DW YSKPVV +DI WNLAFV V+  +L
Sbjct: 60  ARFLSRASSGRVMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAIL 119

Query: 89  IHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEF---RRRNARRAMDMETPQHPQPDIDG 148
           + S  E P  P+R+W+L Y  QC++H V V +E+                          
Sbjct: 120 VMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYXXXXXXXXXXXXXXXXXXXXXXXXXX 179

Query: 149 YFSNESNDEDGSPRN--------------LSGVAKRCETVNTLVSLIWWLLGFYWVMAGG 208
                     GS RN               S VAK  E+ NT+ S IWW++GFYWV AGG
Sbjct: 180 XXXXXXXXXXGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGG 239

Query: 209 NLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSLIALLLHNFVQLC 268
             L Q +P +YW                                                
Sbjct: 240 QELAQESPRIYW------------------------------------------------ 299

Query: 269 LMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG 328
                            L++VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA 
Sbjct: 300 -----------------LSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVA- 359

Query: 329 QQEGATEADLSTLSKYRYQV-------SNNPSPG--DGLMVPMETSSRYLTTEHVLLRED 388
            QEGA++ D+  L+K++++        +N+ + G  +G+M    T S     EH LL+ED
Sbjct: 360 DQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDS---PIEHTLLQED 400

Query: 389 AECCICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILKN 410
           AECCICLS+YEDG EL  LPC HHFH +C  KWL +NATCPLCKYNILK+
Sbjct: 420 AECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKS 400

[Close]
BLAST of Carg26052 vs. TAIR10
Match: AT3G61180.1 (RING/U-box superfamily protein)

HSP 1 Score: 262.7 bits (670), Expect = 3.8e-70
Identity = 165/428 (38.55%), Postives = 213/428 (49.77%), Query Frame = 0 

Query: 10  LRSRQPSNTDGSTSPI-GPLAVLLGRATGR----RGTSMVVRETAARELEERRIDWGYSK 69
           L  R   N   S+ PI G  + LL RA+ R    R  S+ VRE AA +LEER+  W YSK
Sbjct: 23  LLGRNRRNRPRSSQPIRGAASRLLRRASNRRMMLREPSVRVREVAAEQLEERQSQWAYSK 82

Query: 70  PVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRRRNA 129
           P++ +DI WN  FV VS+ +L  S DE P+ P+RLWI+ Y  QCL H   V  E++RR  
Sbjct: 83  PIIVLDILWNFLFVIVSIAILGFSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRRRV 142

Query: 130 RRAMDMETPQHPQPDIDGYFSNES------------NDEDGSPRNLSGVAKRCETVNTLV 189
             +        P P  +   ++ES                      +   K  E+ NT+ 
Sbjct: 143 ANS--------PPPSGEDSSNHESLSXXXXXXXXXXXXXXXXXXXXTSFTKHLESANTMF 202

Query: 190 SLIWWLLGFYWVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLV 249
           S +WW++GFYWV A    L Q++P LYW                                
Sbjct: 203 SFVWWIIGFYWVTADTEALAQSSPQLYW-------------------------------- 262

Query: 250 IHSLIALLLHNFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIAL 309
                                            L V FLAFDV F + CV +A LIGIA+
Sbjct: 263 ---------------------------------LCVAFLAFDVMFVVICVAVASLIGIAV 322

Query: 310 CCCLPCIIAILYAVAGQQEGATEADLSTLSKYRYQVSNNPSPGD--------GLMVPMET 369
           CCCLPCIIAILYA+A  QEGA + ++  L K+++    N    +        G+M  ++T
Sbjct: 323 CCCLPCIIAILYALA-DQEGAPDEEIERLLKFKFLTVKNSEKVNGEIRETQGGIMTGLDT 373

Query: 370 SSRYLTTEHVLLREDAECCICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKY 413
            S+   TE +LL EDAEC ICL +YEDGVEL  LPC HHFH  C  KWL++NATCPLCK+
Sbjct: 383 ESQ---TERMLLSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCKF 373

[Close]
BLAST of Carg26052 vs. Swiss-Prot
Match: sp|Q8GUU2|RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 3.6e-102
Identity = 209/413 (50.61%), Postives = 250/413 (60.53%), Query Frame = 0 

Query: 2   AAAQQTPFLRSRQPSNTDGSTSPIGP--LAVLLGRATGRRGTSMVVRETAARELEERRID 61
           A  Q  P LR R   +   S+S   P  LAVLLGR TG R  SM+VRETAAR LEERRID
Sbjct: 11  ARDQHAPLLRPRHDGSFSSSSSSARPTALAVLLGRITGHRAPSMLVRETAARALEERRID 70

Query: 62  WGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEF 121
           WGYSKPVVA DI WN A V  S  +L+ +V+E+PN PIR+WI VY  QCL H VLVW E+
Sbjct: 71  WGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEY 130

Query: 122 RRRNA-RRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWL 181
            RRN+ RRA D+E+  H   +I+  +  +S+D            KRCE++NT++S IWW+
Sbjct: 131 WRRNSTRRARDLESYDHEDYNIEYDYEQDSDDNS----TTYSFVKRCESINTVISFIWWI 190

Query: 182 LGFYWVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSLIA 241
           +GFYWV+ GG+ LL  AP+LYW                                      
Sbjct: 191 IGFYWVVEGGDKLLGEAPNLYW-------------------------------------- 250

Query: 242 LLLHNFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPC 301
                                      L+V+FLA DVFFA+FCVVLACL+GIALCCCLPC
Sbjct: 251 ---------------------------LSVIFLAIDVFFAVFCVVLACLVGIALCCCLPC 310

Query: 302 IIAILYAVAGQQEGATEADLSTLSKYRYQV--SNNPS-PGDGLMVPMETSSRYLTTEHVL 361
           IIA+LYAVAG  EG +EA+L  L  Y+++   SN  +  G G MVP+  +   L TE  L
Sbjct: 311 IIALLYAVAG-TEGVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTL 353

Query: 362 LREDAECCICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILK 409
           L EDA+CCICLSSYEDG ELHALPCNHHFH TC  KWLKM ATCPLCKYNILK
Sbjct: 371 LAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILK 353

[Close]
BLAST of Carg26052 vs. Swiss-Prot
Match: sp|Q93Z92|RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.8e-72
Identity = 158/375 (42.13%), Postives = 197/375 (52.53%), Query Frame = 0 

Query: 39  RGTSMVVRETAARELEERRIDWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIR 98
           R  SM+VRETAA +LEER+ DW YSKPVV +DI WNLAFV + + VLI S DEKPN P+R
Sbjct: 82  REPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLR 141

Query: 99  LWILVYVAQCLVHSVLVWLEFRRRNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNL 158
           +W++ Y  QC +H   V +E+                        + + +  ED      
Sbjct: 142 VWVVGYGIQCWLHMACVCVEYXXXXXXXXXXXXXXXXXXXXXXXXYVSLAQLEDRG--ET 201

Query: 159 SGVAKRCETVNTLVSLIWWLLGFYWVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGL 218
           S  AK  E+ NT+ S IWW++GFYWV AGG  L  ++P LYW                  
Sbjct: 202 SNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYW------------------ 261

Query: 219 GLHHKLTDPEIFLVIHSLIALLLHNFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFA 278
                                                          L ++FL FDVFF 
Sbjct: 262 -----------------------------------------------LCIIFLGFDVFFV 321

Query: 279 IFCVVLACLIGIALCCCLPCIIAILYAVAGQQEGATEADLSTLSKYRYQVSNN----PSP 338
           +FCV LAC+IG+A+CCCLPCIIAILYAVA  QEGA++ D+  + K+R+  + N       
Sbjct: 322 VFCVALACVIGLAVCCCLPCIIAILYAVA-DQEGASKNDIDQMPKFRFTKTGNVEKLSGK 381

Query: 339 GDGLMVPMETSSRYLTTEHVLLREDAECCICLSSYEDGVELHALPCNHHFHYTCSAKWLK 398
             G+M    T S     E  L  EDAECCICL  YEDGVEL  LPCNHHFH TC  KWL 
Sbjct: 382 ARGIMTECGTDS---PIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLH 385

Query: 399 MNATCPLCKYNILKN 410
           +N+ CPLCK+NILKN
Sbjct: 442 INSRCPLCKFNILKN 385

[Close]
BLAST of Carg26052 vs. Swiss-Prot
Match: sp|Q9LN71|RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.1e-71
Identity = 168/410 (40.98%), Postives = 213/410 (51.95%), Query Frame = 0 

Query: 29  AVLLGRA-TGR--RGTSMVVRETAARELEERRIDWGYSKPVVAVDIAWNLAFVFVSLGVL 88
           A  L RA +GR  R  SM+VRE AA +LEER+ DW YSKPVV +DI WNLAFV V+  +L
Sbjct: 60  ARFLSRASSGRVMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAIL 119

Query: 89  IHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEF---RRRNARRAMDMETPQHPQPDIDG 148
           + S  E P  P+R+W+L Y  QC++H V V +E+                          
Sbjct: 120 VMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYXXXXXXXXXXXXXXXXXXXXXXXXXX 179

Query: 149 YFSNESNDEDGSPRN--------------LSGVAKRCETVNTLVSLIWWLLGFYWVMAGG 208
                     GS RN               S VAK  E+ NT+ S IWW++GFYWV AGG
Sbjct: 180 XXXXXXXXXXGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGG 239

Query: 209 NLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSLIALLLHNFVQLC 268
             L Q +P +YW                                                
Sbjct: 240 QELAQESPRIYW------------------------------------------------ 299

Query: 269 LMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAG 328
                            L++VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA 
Sbjct: 300 -----------------LSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVA- 359

Query: 329 QQEGATEADLSTLSKYRYQV-------SNNPSPG--DGLMVPMETSSRYLTTEHVLLRED 388
            QEGA++ D+  L+K++++        +N+ + G  +G+M    T S     EH LL+ED
Sbjct: 360 DQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDS---PIEHTLLQED 400

Query: 389 AECCICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILKN 410
           AECCICLS+YEDG EL  LPC HHFH +C  KWL +NATCPLCKYNILK+
Sbjct: 420 AECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKS 400

[Close]
BLAST of Carg26052 vs. Swiss-Prot
Match: sp|Q8LDB8|RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 248.1 bits (632), Expect = 1.8e-64
Identity = 152/385 (39.48%), Postives = 189/385 (49.09%), Query Frame = 0 

Query: 49  AARELEERRIDWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQC 108
           AA +LEER+ DW YSKPVV +D  WNLAFV V+  VL+ S DE PN P+R+WI+ Y  QC
Sbjct: 57  AAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQC 116

Query: 109 LVHSVLVWLEFRRRNARRAMDMETPQHPQPDIDGYF------------SNESNDEDGSPR 168
           ++                                              S+E   E G   
Sbjct: 117 MMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNSDERYLELGQLE 176

Query: 169 N-LSGVAKRCETVNTLVSLIWWLLGFYWVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAA 228
           N  +  AK  E+ NT++S IWW++GFYWV +GG  L Q +P LYW               
Sbjct: 177 NENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYW--------------- 236

Query: 229 WGLGLHHKLTDPEIFLVIHSLIALLLHNFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDV 288
                                                             L +VFL FDV
Sbjct: 237 --------------------------------------------------LCIVFLGFDV 296

Query: 289 FFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQQEGATEADLSTLSKYRYQ-------- 348
           FF +FCV LAC+IGIA+CCCLPCIIA+LYAVA +QEGA++ D+  L+K++++        
Sbjct: 297 FFVVFCVALACVIGIAVCCCLPCIIAVLYAVA-EQEGASKEDIDQLTKFKFRKVGDTMKH 356

Query: 349 -VSNNPSPGD--GLMVPMETSSRYLTTEHVLLREDAECCICLSSYEDGVELHALPCNHHF 408
            V      GD  G+M    T S     EH L  EDAECCICLS+YED  EL  LPC HHF
Sbjct: 357 TVDEEQGQGDSGGVMTECGTDS---PVEHALPHEDAECCICLSAYEDETELRELPCGHHF 372

Query: 409 HYTCSAKWLKMNATCPLCKYNILKN 410
           H  C  KWL +NATCPLCKYNILK+
Sbjct: 417 HCGCVDKWLYINATCPLCKYNILKS 372

[Close]
BLAST of Carg26052 vs. Swiss-Prot
Match: sp|Q08CG8|RNF44_DANRE (RING finger protein 44 OS=Danio rerio OX=7955 GN=rnf44 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 9.5e-10
Identity = 32/92 (34.78%), Postives = 41/92 (44.57%), Query Frame = 0 

Query: 312 GATEADLSTLSKYRYQVSNNPSPGDGLMVPMETSSRYLTTEHVLLREDAECCICLSSYED 371
           G T+AD+  L  YR+ + N+ S                        E   C +C S +E 
Sbjct: 370 GLTKADIEQLPSYRFNLENHQS------------------------EQTLCVVCFSDFES 429

Query: 372 GVELHALPCNHHFHYTCSAKWLKMNATCPLCK 404
              L  LPCNH FH  C  KWLK N TCP+C+
Sbjct: 430 RQLLRVLPCNHEFHAKCVDKWLKTNRTCPICR 437

[Close]
BLAST of Carg26052 vs. TrEMBL
Match: tr|A0A1S3CTU7|A0A1S3CTU7_CUCME (E3 ubiquitin protein ligase RIE1 OS=Cucumis melo OX=3656 GN=LOC103504433 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 8.5e-157
Identity = 295/411 (71.78%), Postives = 314/411 (76.40%), Query Frame = 0 

Query: 4   AQQTPFLRSRQ-PSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWGY 63
           AQQ P L SRQ PSN+D STSPIGPLA+LLGRATGRRGTSM+VRETAARELEERRIDWGY
Sbjct: 14  AQQIPLLPSRQPPSNSDASTSPIGPLALLLGRATGRRGTSMLVRETAARELEERRIDWGY 73

Query: 64  SKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRRR 123
           SKPVVA+DI WNLAFVFVSLGVLI SV EKPNTPIRLWI+VY AQCLVH VLVW EF+RR
Sbjct: 74  SKPVVALDITWNLAFVFVSLGVLIRSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRR 133

Query: 124 NARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWLLGFY 183
           NARRA DMET Q  QP  DGY +NES+++DG  R+LS VAKRCE+VNTLVSLIWWL GFY
Sbjct: 134 NARRARDMETQQQQQP--DGYVTNESDEDDGGQRSLSSVAKRCESVNTLVSLIWWLFGFY 193

Query: 184 WVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSLIALLLH 243
           WV+AGGN+L+QNAPSLYW                                          
Sbjct: 194 WVVAGGNILMQNAPSLYW------------------------------------------ 253

Query: 244 NFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 303
                                  LAVVFLAFDVFFA+FCVVLACLIGIALCCCLPCIIAI
Sbjct: 254 -----------------------LAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAI 313

Query: 304 LYAVAGQQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPMETSSRYLTTEHVLLREDAEC 363
           LYAVAG QEGAT+ADLS L KYRY+VSN PSPGDGLMVP+ETSSRYLTTE VLLREDAEC
Sbjct: 314 LYAVAG-QEGATDADLSMLPKYRYRVSNEPSPGDGLMVPVETSSRYLTTERVLLREDAEC 356

Query: 364 CICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILKNCEPV 414
           CICLS YEDGVELHALPCNHHFHY C  KWLKMNATCPLCKYNILKN EPV
Sbjct: 374 CICLSPYEDGVELHALPCNHHFHYACITKWLKMNATCPLCKYNILKNSEPV 356

[Close]
BLAST of Carg26052 vs. TrEMBL
Match: tr|E5GB66|E5GB66_CUCME (Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 8.5e-157
Identity = 295/411 (71.78%), Postives = 314/411 (76.40%), Query Frame = 0 

Query: 4   AQQTPFLRSRQ-PSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWGY 63
           AQQ P L SRQ PSN+D STSPIGPLA+LLGRATGRRGTSM+VRETAARELEERRIDWGY
Sbjct: 14  AQQIPLLPSRQPPSNSDASTSPIGPLALLLGRATGRRGTSMLVRETAARELEERRIDWGY 73

Query: 64  SKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRRR 123
           SKPVVA+DI WNLAFVFVSLGVLI SV EKPNTPIRLWI+VY AQCLVH VLVW EF+RR
Sbjct: 74  SKPVVALDITWNLAFVFVSLGVLIRSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRR 133

Query: 124 NARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWLLGFY 183
           NARRA DMET Q  QP  DGY +NES+++DG  R+LS VAKRCE+VNTLVSLIWWL GFY
Sbjct: 134 NARRARDMETQQQQQP--DGYVTNESDEDDGGQRSLSSVAKRCESVNTLVSLIWWLFGFY 193

Query: 184 WVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSLIALLLH 243
           WV+AGGN+L+QNAPSLYW                                          
Sbjct: 194 WVVAGGNILMQNAPSLYW------------------------------------------ 253

Query: 244 NFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 303
                                  LAVVFLAFDVFFA+FCVVLACLIGIALCCCLPCIIAI
Sbjct: 254 -----------------------LAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAI 313

Query: 304 LYAVAGQQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPMETSSRYLTTEHVLLREDAEC 363
           LYAVAG QEGAT+ADLS L KYRY+VSN PSPGDGLMVP+ETSSRYLTTE VLLREDAEC
Sbjct: 314 LYAVAG-QEGATDADLSMLPKYRYRVSNEPSPGDGLMVPVETSSRYLTTERVLLREDAEC 356

Query: 364 CICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILKNCEPV 414
           CICLS YEDGVELHALPCNHHFHY C  KWLKMNATCPLCKYNILKN EPV
Sbjct: 374 CICLSPYEDGVELHALPCNHHFHYACITKWLKMNATCPLCKYNILKNSEPV 356

[Close]
BLAST of Carg26052 vs. TrEMBL
Match: tr|A0A0A0KRG7|A0A0A0KRG7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G561780 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 7.2e-156
Identity = 292/411 (71.05%), Postives = 313/411 (76.16%), Query Frame = 0 

Query: 4   AQQTPFLRSRQ-PSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWGY 63
           AQQ P L SRQ PSN+D STSPIGPLA+LLGRATGRRGTSM+VRETAARELEERRIDWGY
Sbjct: 14  AQQIPLLPSRQPPSNSDASTSPIGPLALLLGRATGRRGTSMLVRETAARELEERRIDWGY 73

Query: 64  SKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRRR 123
           SKPVVA+DI WNLAFVFVSLGVLIHSV EKPNTPIRLWI+VY AQCLVH VLVW EF+RR
Sbjct: 74  SKPVVALDITWNLAFVFVSLGVLIHSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRR 133

Query: 124 NARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWLLGFY 183
           NARRA DMET Q  +P  DGY +NES+++DG  R+ S VAKRCE+VNT+VSLIWWL GFY
Sbjct: 134 NARRARDMETQQQQEP--DGYVTNESDEDDGGQRSFSSVAKRCESVNTMVSLIWWLFGFY 193

Query: 184 WVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSLIALLLH 243
           WV+AGGN+L+QNAPSLYW                                          
Sbjct: 194 WVVAGGNILMQNAPSLYW------------------------------------------ 253

Query: 244 NFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 303
                                  LAVVFLAFDVFFA+FCVVLACLIGIALCCCLPCIIAI
Sbjct: 254 -----------------------LAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAI 313

Query: 304 LYAVAGQQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPMETSSRYLTTEHVLLREDAEC 363
           LYAVAG QEGAT+ADLS L KYRY+VSN PSPGDGLMVP+ETSSRYLTTE VLL EDAEC
Sbjct: 314 LYAVAG-QEGATDADLSMLPKYRYRVSNEPSPGDGLMVPVETSSRYLTTERVLLCEDAEC 356

Query: 364 CICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILKNCEPV 414
           CICLS YEDGVELHALPCNHHFHY C  KWLKMNATCPLCKYNILKNCE V
Sbjct: 374 CICLSPYEDGVELHALPCNHHFHYACITKWLKMNATCPLCKYNILKNCEHV 356

[Close]
BLAST of Carg26052 vs. TrEMBL
Match: tr|A0A0D2NDG7|A0A0D2NDG7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G157000 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.5e-118
Identity = 241/420 (57.38%), Postives = 275/420 (65.48%), Query Frame = 0 

Query: 2   AAAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWG 61
           A+    P LR RQP   DGS +    LA LLGRATGRRG SM+VRETAARELEERR DWG
Sbjct: 3   ASDPHAPLLRPRQP---DGSAARPVSLAHLLGRATGRRGASMLVRETAARELEERRADWG 62

Query: 62  YSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRR 121
           YSKPVVA+D+ WN AFV VS+ +LI + DE PNTPIRLWI  Y  QCL+H VLVWLE+RR
Sbjct: 63  YSKPVVALDMLWNTAFVVVSVVMLISTADETPNTPIRLWICAYALQCLLHVVLVWLEYRR 122

Query: 122 RNARR--AMDMETPQHPQPDIDGYFSNESNDEDGS---PRNLSGVAKRCETVNTLVSLIW 181
           RN+RR    D E  +    D+     N+S DE+ S     N S + KRCETVNT+ S +W
Sbjct: 123 RNSRRISVTDEERGEAVSGDV-----NDSEDEEDSGLFGSNESSITKRCETVNTMASFLW 182

Query: 182 WLLGFYWVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSL 241
           W++GFYWV++GG++LLQNAP LYW                                    
Sbjct: 183 WIVGFYWVVSGGDILLQNAPRLYW------------------------------------ 242

Query: 242 IALLLHNFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCL 301
                                        LAVVFLAFDVFFAIFCVVLACLIGIALCCCL
Sbjct: 243 -----------------------------LAVVFLAFDVFFAIFCVVLACLIGIALCCCL 302

Query: 302 PCIIAILYAVAGQQEGATEADLSTLSKYRYQVSNN---PSPGDGLMVPMETSSRYLTTEH 361
           PCIIAILYA+  +QEGA+EADLS L KY++Q+ NN   PS G G M+P+ETSS YL  E 
Sbjct: 303 PCIIAILYAIT-EQEGASEADLSILPKYKFQIINNREKPSLGAGKMIPIETSSGYLANER 348

Query: 362 VLLREDAECCICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILKNCEPV 414
           +LL EDAECCICLSSYEDGV+LHALPCNHHFH TC  KWLKMNATCPLCKYNILK  E V
Sbjct: 363 ILLPEDAECCICLSSYEDGVDLHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 348

[Close]
BLAST of Carg26052 vs. TrEMBL
Match: tr|A0A061EFM2|A0A061EFM2_THECC (Zinc finger, C3HC4 type (RING finger) family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_011052 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 7.8e-118
Identity = 247/422 (58.53%), Postives = 274/422 (64.93%), Query Frame = 0 

Query: 1   MAAAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDW 60
           +A+    P LR RQP   D S +    LA+LLGRATGRRG SM+VRETAARELEERR DW
Sbjct: 12  VASDSHAPLLRPRQP---DASAARPATLALLLGRATGRRGASMLVRETAARELEERRADW 71

Query: 61  GYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFR 120
           GYSKPVVA+D+ WN AFV VS+ +LI +VDE+ NTPIRLWI  Y  QCLVH VLVWLE+R
Sbjct: 72  GYSKPVVALDMLWNTAFVAVSVAMLICTVDERTNTPIRLWICGYALQCLVHVVLVWLEYR 131

Query: 121 RRNARR--AMDMETPQHPQPDIDGYFSNESNDE-DGSPR-----NLSGVAKRCETVNTLV 180
           RRN RR  A D E       D     +N+S DE DG  R     N S V KRCE+VNT+V
Sbjct: 132 RRNVRRTSARDEERGDATSGD-----ANDSEDEQDGIERSAFGSNQSSVTKRCESVNTMV 191

Query: 181 SLIWWLLGFYWVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLV 240
           S +WW++GFYWV++GGN LLQNAP LYW                                
Sbjct: 192 SFLWWIVGFYWVVSGGNYLLQNAPRLYW-------------------------------- 251

Query: 241 IHSLIALLLHNFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIAL 300
                                            LAVVFLAFDVFFAIFCVVLACLIGIAL
Sbjct: 252 ---------------------------------LAVVFLAFDVFFAIFCVVLACLIGIAL 311

Query: 301 CCCLPCIIAILYAVAGQQEGATEADLSTLSKYRYQVSNN---PSPGDGLMVPMETSSRYL 360
           CCCLPCIIAILYAVAG QEGA+EADLS L KYR+Q+ NN    S G G MVP+ETSS YL
Sbjct: 312 CCCLPCIIAILYAVAG-QEGASEADLSILPKYRFQIINNGGKASVGAGKMVPVETSSGYL 359

Query: 361 TTEHVLLREDAECCICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILKN 412
             E +LL EDAECCICLSSYEDG +LHALPCNHHFH  C  KWLKMNATCPLCKYNILK 
Sbjct: 372 ANERILLPEDAECCICLSSYEDGADLHALPCNHHFHSACIVKWLKMNATCPLCKYNILKG 359

The following BLAST results are available for this feature:
BLAST of Carg26052 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022960124.12.8e-18883.01E3 ubiquitin protein ligase RIE1-like isoform X1 [Cucurbita moschata][more]
XP_023541075.18.3e-18882.52E3 ubiquitin protein ligase RIE1-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022960133.12.7e-18682.77E3 ubiquitin protein ligase RIE1-like isoform X2 [Cucurbita moschata][more]
XP_023541082.17.8e-18682.28E3 ubiquitin protein ligase RIE1-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022990085.18.6e-18581.55E3 ubiquitin protein ligase RIE1-like isoform X1 [Cucurbita maxima][more]
BLAST of Carg26052 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68070.11.1e-10954.52Zinc finger, C3HC4 type (RING finger) family protein[more]
AT2G01735.12.0e-10350.61RING-finger protein for embryogenesis[more]
AT4G11680.19.7e-7442.13Zinc finger, C3HC4 type (RING finger) family protein[more]
AT1G12760.16.3e-7340.98Zinc finger, C3HC4 type (RING finger) family protein[more]
AT3G61180.13.8e-7038.55RING/U-box superfamily protein[more]
BLAST of Carg26052 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8GUU2|RIE1_ARATH3.6e-10250.61E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV... [more]
sp|Q93Z92|RING4_ARATH1.8e-7242.13E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g116... [more]
sp|Q9LN71|RING1_ARATH1.1e-7140.98E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g127... [more]
sp|Q8LDB8|RING2_ARATH1.8e-6439.48E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631... [more]
sp|Q08CG8|RNF44_DANRE9.5e-1034.78RING finger protein 44 OS=Danio rerio OX=7955 GN=rnf44 PE=2 SV=1[more]
BLAST of Carg26052 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CTU7|A0A1S3CTU7_CUCME8.5e-15771.78E3 ubiquitin protein ligase RIE1 OS=Cucumis melo OX=3656 GN=LOC103504433 PE=4 SV... [more]
tr|E5GB66|E5GB66_CUCME8.5e-15771.78Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A0A0KRG7|A0A0A0KRG7_CUCSA7.2e-15671.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G561780 PE=4 SV=1[more]
tr|A0A0D2NDG7|A0A0D2NDG7_GOSRA3.5e-11857.38Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G157000 PE=4 ... [more]
tr|A0A061EFM2|A0A061EFM2_THECC7.8e-11858.53Zinc finger, C3HC4 type (RING finger) family protein isoform 1 OS=Theobroma caca... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26052-RACarg26052-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 362..402
e-value: 3.2E-6
score: 36.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 361..403
e-value: 2.3E-13
score: 50.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 362..403
score: 12.371
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 338..408
e-value: 9.5E-17
score: 62.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..157
NoneNo IPR availablePANTHERPTHR14155:SF425E3 UBIQUITIN PROTEIN LIGASE RIE1coord: 5..212
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 255..408
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 5..212
NoneNo IPR availablePANTHERPTHR14155:SF425E3 UBIQUITIN PROTEIN LIGASE RIE1coord: 255..408
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 348..408

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg26052Cla003957Watermelon (97103) v1carwmB0424
Carg26052Csa5G561780Cucumber (Chinese Long) v2carcuB0460
Carg26052ClCG01G006570Watermelon (Charleston Gray)carwcgB0420
Carg26052CSPI05G19250Wild cucumber (PI 183967)carcpiB0466
Carg26052Cucsa.012230Cucumber (Gy14) v1carcgyB0493
Carg26052CmaCh04G021030Cucurbita maxima (Rimu)carcmaB0595
Carg26052CmaCh15G009810Cucurbita maxima (Rimu)carcmaB0594
Carg26052CmoCh15G010280Cucurbita moschata (Rifu)carcmoB0579
Carg26052CmoCh04G022050Cucurbita moschata (Rifu)carcmoB0580
Carg26052Lsi09G006900Bottle gourd (USVL1VR-Ls)carlsiB388
Carg26052Cp4.1LG01g18270Cucurbita pepo (Zucchini)carcpeB0600
Carg26052Cp4.1LG13g03460Cucurbita pepo (Zucchini)carcpeB0599
Carg26052CsGy5G018770Cucumber (Gy14) v2carcgybB0435
Carg26052CsaV3_5G028180Cucumber (Chinese Long) v3carcucB0461
Carg26052Cla97C01G006880Watermelon (97103) v2carwmbB0451
Carg26052Bhi12G000822Wax gourdcarwgoB0513
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg26052Silver-seed gourdcarcarB229
Carg26052Cucumber (Gy14) v2carcgybB0436
Carg26052Cucumber (Gy14) v2carcgybB0437
Carg26052Cucumber (Gy14) v1carcgyB0494
Carg26052Cucumber (Gy14) v1carcgyB0495
Carg26052Cucurbita maxima (Rimu)carcmaB0593
Carg26052Cucurbita moschata (Rifu)carcmoB0578
Carg26052Wild cucumber (PI 183967)carcpiB0464
Carg26052Wild cucumber (PI 183967)carcpiB0465
Carg26052Cucumber (Chinese Long) v2carcuB0461
Carg26052Bottle gourd (USVL1VR-Ls)carlsiB387
Carg26052Melon (DHL92) v3.5.1carmeB0435
Carg26052Melon (DHL92) v3.5.1carmeB0436
Carg26052Melon (DHL92) v3.6.1carmedB0437
Carg26052Melon (DHL92) v3.6.1carmedB0438
Carg26052Watermelon (Charleston Gray)carwcgB0419
Carg26052Watermelon (97103) v1carwmB0423
Carg26052Watermelon (97103) v2carwmbB0450
Carg26052Wax gourdcarwgoB0512