CmoCh15G010280 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G010280
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRING-H2 finger protein 2B
LocationCmo_Chr15 : 6128617 .. 6130641 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTTTAATGGATTTATTTATTATTAGCATTTTGTTTTGATGTAAATTAGTCTAAAAATTAACCTTCGTAGGGAAAAAGAAAGGATGAGAATGGGGAGAGAGAGGGGAGAAGAAGAAGGCAGGATTGAAATTTTGGAATCAACAAAGTGAAGAATGGACGTGATACTCCCTCGGATCATGAACTTTCCATCAATTTCTAAAACCACGAACCAGCAGCAGAAGATTCTCCTTCTCAATCAAGACGCCCCCAATTCATAACCCTTCTAATTTCATTCAATCAAATCCTCACCGGCGACCATGTCTTCTCCTTCCATGGAGGCGCCTGCCCAACAGATCCCTCTCTTACCCTCCCGTCATCCCTCCAACTCTGACGCCTCCACTTCCCCCATCGGCCCCCTCGCTGTTCTCTTCGCTCACGCCACTGGCCGCCGTGGAACTTCTATGGTGGTCCGGGAGACAGCGGCGCGTGAACTTGAAGAGCGCCGCATCGATTGGGGGTATTCCAAGCCGGTGGTGGCTCTTGACATTATGTGGAATTTGGCTTTCGTTTTCGCTTCTCTGGGTGTGCTTATTCACTCGGCCGATGAAAAACCTAACACGCCAATTCGGCTTTGGATTGTCGTTTATGCGGTTCAATGCTTGGTGCACGCTGTGCTTGTGTGGTTTGAATTCAGAAGGAGGAATGCGAGGAGGGCTAGGGATATGGAGACGCAGCATAATGCATATGTAGCTAATGAAAGCGATGAAGAAGATGGTACCCCCTGGAATCTCTCCGGGTGAGTAAAACTTCAATTCTCTCTGCTATATAAAGCTGTGACCGTCTTGAACTCAAACATTGCTTATTTTTACTGAAATTTGATATGGGTCTGAACTCGGGTTTGATTGAATTACAAGGCAGTGGATAGCTTTTCTGATTTTAAATGTTGTATTGATTGAATGAATGAGTAAATTGGTGAGGATCAGTTATAGATTCCTGATTTGATGATTTATAAGTCATTAGCATGTAATTGACTTGGTGGCGGATGAGCAGTGTTGCCAAAAGATGTGAGTCAGTGAACACCCTGATATCATTAATTTGGTGGTTGTTTGGCTTTTACTGGGTCGTGGCTGGGGGTAACATCCTAATGCAGAATGCTCCATCTTTATACTGGTATGATTTTGAACCATCGTGATTCTGGCTGTGGTGGGGGGCATGCATCATTTATCTGTTTCTAATTCTGAGTTTATGCAGGTTGGCTGTGGTATTTCTGGCATTTGATGTGTTCTTTGCCATCTTTTGTGTTGTTTTGGCATGTTTGATTGGAATTGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTTTATGCTGTTGCAGGCCAGGTAAGAGGAAATCCCTGTTTCATGGCTGCCACACAGAGATGTTAGCCAAATTCAGGCCCCATGAAACCTGCTAACTTCTTTCTTTCCTTCCTTCCTTTCCCCCTCACATCTCAACAGGAAGGTGCAACCGATGCTGATTTAAGTATGCTTCCTAAGTATAGATATCAAGTGTCCAATGAGCCTTCTTCTGGGGATGGTTTGATGGTTCCCATCGAATCTAGCAGCAGACACTTAACGACTGAGCGTGTTCTATTACGCGAGGATGCGGTAAAGTGAACTCGTTTATCGTTATTCGGAAATGATCTTTCTCCTCTTGGTTGAATCAGTTTTCTTTCTAAATCCTTAATCATCTTTATGATCTTTGTTGTAGGAGTGCTGTATATGCCTTAGTCCTTACGAGGACGGAGCCGAGCTTCATGCTCTTCCATGCAATCACCATTTTCATTATGCTTGTATCACAAAATGGCTGAAGATGAATGCAACATGTCCTCTGTGCAAGTACAACATTCTAAAAAATTATGAACCCGTGTAACGCTGAAGATTAAACGATGCTGTGAATTCCTGGTATGTACATATAGATCACGTCGTGATCCTGCTTCGTTCTGGTTCAAACTTGTTAGTCTTTTCTTGTTTCCCCTTCTTCGTGTTCATGCTGCCTGA

mRNA sequence

AAATTTTAATGGATTTATTTATTATTAGCATTTTGTTTTGATGTAAATTAGTCTAAAAATTAACCTTCGTAGGGAAAAAGAAAGGATGAGAATGGGGAGAGAGAGGGGAGAAGAAGAAGGCAGGATTGAAATTTTGGAATCAACAAAGTGAAGAATGGACGTGATACTCCCTCGGATCATGAACTTTCCATCAATTTCTAAAACCACGAACCAGCAGCAGAAGATTCTCCTTCTCAATCAAGACGCCCCCAATTCATAACCCTTCTAATTTCATTCAATCAAATCCTCACCGGCGACCATGTCTTCTCCTTCCATGGAGGCGCCTGCCCAACAGATCCCTCTCTTACCCTCCCGTCATCCCTCCAACTCTGACGCCTCCACTTCCCCCATCGGCCCCCTCGCTGTTCTCTTCGCTCACGCCACTGGCCGCCGTGGAACTTCTATGGTGGTCCGGGAGACAGCGGCGCGTGAACTTGAAGAGCGCCGCATCGATTGGGGGTATTCCAAGCCGGTGGTGGCTCTTGACATTATGTGGAATTTGGCTTTCGTTTTCGCTTCTCTGGGTGTGCTTATTCACTCGGCCGATGAAAAACCTAACACGCCAATTCGGCTTTGGATTGTCGTTTATGCGGTTCAATGCTTGGTGCACGCTGTGCTTGTGTGGTTTGAATTCAGAAGGAGGAATGCGAGGAGGGCTAGGGATATGGAGACGCAGCATAATGCATATGTAGCTAATGAAAGCGATGAAGAAGATGGTACCCCCTGGAATCTCTCCGGTGTTGCCAAAAGATGTGAGTCAGTGAACACCCTGATATCATTAATTTGGTGGTTGTTTGGCTTTTACTGGGTCGTGGCTGGGGGTAACATCCTAATGCAGAATGCTCCATCTTTATACTGGTTGGCTGTGGTATTTCTGGCATTTGATGTGTTCTTTGCCATCTTTTGTGTTGTTTTGGCATGTTTGATTGGAATTGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTTTATGCTGTTGCAGGCCAGGAAGGTGCAACCGATGCTGATTTAAGTATGCTTCCTAAGTATAGATATCAAGTGTCCAATGAGCCTTCTTCTGGGGATGGTTTGATGGTTCCCATCGAATCTAGCAGCAGACACTTAACGACTGAGCGTGTTCTATTACGCGAGGATGCGGAGTGCTGTATATGCCTTAGTCCTTACGAGGACGGAGCCGAGCTTCATGCTCTTCCATGCAATCACCATTTTCATTATGCTTGTATCACAAAATGGCTGAAGATGAATGCAACATGTCCTCTGTGCAAATCACGTCGTGATCCTGCTTCGTTCTGGTTCAAACTTGTTAGTCTTTTCTTGTTTCCCCTTCTTCGTGTTCATGCTGCCTGA

Coding sequence (CDS)

ATGTCTTCTCCTTCCATGGAGGCGCCTGCCCAACAGATCCCTCTCTTACCCTCCCGTCATCCCTCCAACTCTGACGCCTCCACTTCCCCCATCGGCCCCCTCGCTGTTCTCTTCGCTCACGCCACTGGCCGCCGTGGAACTTCTATGGTGGTCCGGGAGACAGCGGCGCGTGAACTTGAAGAGCGCCGCATCGATTGGGGGTATTCCAAGCCGGTGGTGGCTCTTGACATTATGTGGAATTTGGCTTTCGTTTTCGCTTCTCTGGGTGTGCTTATTCACTCGGCCGATGAAAAACCTAACACGCCAATTCGGCTTTGGATTGTCGTTTATGCGGTTCAATGCTTGGTGCACGCTGTGCTTGTGTGGTTTGAATTCAGAAGGAGGAATGCGAGGAGGGCTAGGGATATGGAGACGCAGCATAATGCATATGTAGCTAATGAAAGCGATGAAGAAGATGGTACCCCCTGGAATCTCTCCGGTGTTGCCAAAAGATGTGAGTCAGTGAACACCCTGATATCATTAATTTGGTGGTTGTTTGGCTTTTACTGGGTCGTGGCTGGGGGTAACATCCTAATGCAGAATGCTCCATCTTTATACTGGTTGGCTGTGGTATTTCTGGCATTTGATGTGTTCTTTGCCATCTTTTGTGTTGTTTTGGCATGTTTGATTGGAATTGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTTTATGCTGTTGCAGGCCAGGAAGGTGCAACCGATGCTGATTTAAGTATGCTTCCTAAGTATAGATATCAAGTGTCCAATGAGCCTTCTTCTGGGGATGGTTTGATGGTTCCCATCGAATCTAGCAGCAGACACTTAACGACTGAGCGTGTTCTATTACGCGAGGATGCGGAGTGCTGTATATGCCTTAGTCCTTACGAGGACGGAGCCGAGCTTCATGCTCTTCCATGCAATCACCATTTTCATTATGCTTGTATCACAAAATGGCTGAAGATGAATGCAACATGTCCTCTGTGCAAATCACGTCGTGATCCTGCTTCGTTCTGGTTCAAACTTGTTAGTCTTTTCTTGTTTCCCCTTCTTCGTGTTCATGCTGCCTGA
Homology
[Close]
BLAST of CmoCh15G010280 vs. Swiss-Prot
Match: RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 3.3e-112
Identity = 211/346 (60.98%), Postives = 252/346 (72.83%), Query Frame = 1 

Query: 2   SSPSMEAPAQQIPLLPSRHPSNSDASTSPIGP--LAVLFAHATGRRGTSMVVRETAAREL 61
           SS S  A  Q  PLL  RH  +  +S+S   P  LAVL    TG R  SM+VRETAAR L
Sbjct: 5   SSDSTAARDQHAPLLRPRHDGSFSSSSSSARPTALAVLLGRITGHRAPSMLVRETAARAL 64

Query: 62  EERRIDWGYSKPVVALDIMWNLAFVFASLGVLIHSADEKPNTPIRLWIVVYAVQCLVHAV 121
           EERRIDWGYSKPVVA DI+WN A V AS  +L+ + +E+PN PIR+WI VY +QCL H V
Sbjct: 65  EERRIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVV 124

Query: 122 LVWFEFRRRNA-RRARDMET----QHNAYVANESDEEDGTPWNLSGVAKRCESVNTLISL 181
           LVW E+ RRN+ RRARD+E+     +N     E D +D +        KRCES+NT+IS 
Sbjct: 125 LVWSEYWRRNSTRRARDLESYDHEDYNIEYDYEQDSDDNS--TTYSFVKRCESINTVISF 184

Query: 182 IWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 241
           IWW+ GFYWVV GG+ L+  AP+LYWL+V+FLA DVFFA+FCVVLACL+GIALCCCLPCI
Sbjct: 185 IWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCI 244

Query: 242 IAILYAVAGQEGATDADLSMLPKYRYQV--SNEPS-SGDGLMVPIESSSRHLTTERVLLR 301
           IA+LYAVAG EG ++A+L +LP Y+++   SNE + +G G MVPI  +   L TER LL 
Sbjct: 245 IALLYAVAGTEGVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLA 304

Query: 302 EDAECCICLSPYEDGAELHALPCNHHFHYACITKWLKMNATCPLCK 338
           EDA+CCICLS YEDGAELHALPCNHHFH  CI KWLKM ATCPLCK
Sbjct: 305 EDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCK 348

[Close]
BLAST of CmoCh15G010280 vs. Swiss-Prot
Match: RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 325.1 bits (832), Expect = 9.8e-88
Identity = 172/337 (51.04%), Postives = 216/337 (64.09%), Query Frame = 1 

Query: 35  AVLFAHAT-GR---RGTSMVVRETAARELEERRIDWGYSKPVVALDIMWNLAFVFASLGV 94
           A L  HA+ GR   R  SM+VRE AA +LEER+ DW YSKPVV LD +WNLAFV  +  V
Sbjct: 33  ARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAV 92

Query: 95  LIHSADEKPNTPIRLWIVVYAVQCLVHAVLVWFEFRRRNARRARDMETQHNAYVANES-- 154
           L+ S+DE PN P+R+WI+ Y +QC++H V V  E+RRRN+RR RD+  + ++  ++ S  
Sbjct: 93  LVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSS 152

Query: 155 -DEEDGTPWNLSG----------------VAKRCESVNTLISLIWWLFGFYWVVAGGNIL 214
            DEE+G   + +                  AK  ES NT+IS IWW+ GFYWV +GG  L
Sbjct: 153 MDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQEL 212

Query: 215 MQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATDAD 274
            Q +P LYWL +VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGA+  D
Sbjct: 213 AQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASKED 272

Query: 275 LSMLPKYRYQ---------VSNEPSSGD--GLMVPIESSSRHLTTERVLLREDAECCICL 334
           +  L K++++         V  E   GD  G+M    + S     E  L  EDAECCICL
Sbjct: 273 IDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDS---PVEHALPHEDAECCICL 332

Query: 335 SPYEDGAELHALPCNHHFHYACITKWLKMNATCPLCK 338
           S YED  EL  LPC HHFH  C+ KWL +NATCPLCK
Sbjct: 333 SAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCK 366

[Close]
BLAST of CmoCh15G010280 vs. Swiss-Prot
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 2.4e-86
Identity = 169/332 (50.90%), Postives = 206/332 (62.05%), Query Frame = 1 

Query: 20  HPSNSDASTSPIGPLAVLFAHATGRR---GTSMVVRETAARELEERRIDWGYSKPVVALD 79
           +P +  A    +   A    HA  RR     SM+VRETAA +LEER+ DW YSKPVV LD
Sbjct: 54  NPIHRSARRQGLREAARFLRHAGSRRMMREPSMLVRETAAEQLEERQSDWAYSKPVVFLD 113

Query: 80  IMWNLAFVFASLGVLIHSADEKPNTPIRLWIVVYAVQCLVHAVLVWFEFRRRNARRARD- 139
           I+WNLAFV   + VLI S DEKPN P+R+W+V Y +QC +H   V  E+RRR  RR  + 
Sbjct: 114 ILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHPED 173

Query: 140 ------METQHNAYVANESDEEDGTPWNLSGVAKRCESVNTLISLIWWLFGFYWVVAGGN 199
                   +    YV+    E+ G     S  AK  ES NT+ S IWW+ GFYWV AGG 
Sbjct: 174 GGGSGLTNSSSQQYVSLAQLEDRG---ETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQ 233

Query: 200 ILMQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATD 259
            L  ++P LYWL ++FL FDVFF +FCV LAC+IG+A+CCCLPCIIAILYAVA QEGA+ 
Sbjct: 234 TLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVADQEGASK 293

Query: 260 ADLSMLPKYRY----QVSNEPSSGDGLMVPIESSSRHLTTERVLLREDAECCICLSPYED 319
            D+  +PK+R+     V        G+M    + S     ER L  EDAECCICL  YED
Sbjct: 294 NDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDS---PIERSLSPEDAECCICLCEYED 353

Query: 320 GAELHALPCNHHFHYACITKWLKMNATCPLCK 338
           G EL  LPCNHHFH  CI KWL +N+ CPLCK
Sbjct: 354 GVELRELPCNHHFHCTCIDKWLHINSRCPLCK 379

[Close]
BLAST of CmoCh15G010280 vs. Swiss-Prot
Match: RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.7e-84
Identity = 162/325 (49.85%), Postives = 210/325 (64.62%), Query Frame = 1 

Query: 45  RGTSMVVRETAARELEERRIDWGYSKPVVALDIMWNLAFVFASLGVLIHSADEKPNTPIR 104
           R  SM+VRE AA +LEER+ DW YSKPVV LDI+WNLAFV  +  +L+ S  E P  P+R
Sbjct: 73  REPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLR 132

Query: 105 LWIVVYAVQCLVHAVLVWFEFRRRNARRA---------RDMETQHNAYVANESDEEDGTP 164
           +W++ YA+QC++H V V  E+RRRN RR          R   +  ++  ++  +E  G+ 
Sbjct: 133 VWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSR 192

Query: 165 WNL--------------SGVAKRCESVNTLISLIWWLFGFYWVVAGGNILMQNAPSLYWL 224
            N               S VAK  ES NT+ S IWW+ GFYWV AGG  L Q +P +YWL
Sbjct: 193 RNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWL 252

Query: 225 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATDADLSMLPKYRYQ 284
           ++VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGA+  D+  L K++++
Sbjct: 253 SIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFR 312

Query: 285 V-------SNEPSSG--DGLMVPIESSSRHLTTERVLLREDAECCICLSPYEDGAELHAL 338
                   +N+ + G  +G+M    + S     E  LL+EDAECCICLS YEDG EL  L
Sbjct: 313 KLGDANKHTNDEAQGTTEGIMTECGTDS---PIEHTLLQEDAECCICLSAYEDGTELREL 372

[Close]
BLAST of CmoCh15G010280 vs. Swiss-Prot
Match: RNF44_DANRE (RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 5.1e-12
Identity = 34/97 (35.05%), Postives = 43/97 (44.33%), Query Frame = 1 

Query: 242 AGQEGATDADLSMLPKYRYQVSNEPSSGDGLMVPIESSSRHLTTERVLLREDAECCICLS 301
           A   G T AD+  LP YR+ + N  S                        E   C +C S
Sbjct: 366 AKPRGLTKADIEQLPSYRFNLENHQS------------------------EQTLCVVCFS 425

Query: 302 PYEDGAELHALPCNHHFHYACITKWLKMNATCPLCKS 339
            +E    L  LPCNH FH  C+ KWLK N TCP+C++
Sbjct: 426 DFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRA 438

[Close]
BLAST of CmoCh15G010280 vs. TrEMBL
Match: A0A0A0KRG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G561780 PE=4 SV=1)

HSP 1 Score: 603.6 bits (1555), Expect = 1.6e-169
Identity = 299/340 (87.94%), Postives = 313/340 (92.06%), Query Frame = 1 

Query: 3   SPSMEAPAQQIPLLPSRHP-SNSDASTSPIGPLAVLFAHATGRRGTSMVVRETAARELEE 62
           SPSM+ PAQQIPLLPSR P SNSDASTSPIGPLA+L   ATGRRGTSM+VRETAARELEE
Sbjct: 7   SPSMDPPAQQIPLLPSRQPPSNSDASTSPIGPLALLLGRATGRRGTSMLVRETAARELEE 66

Query: 63  RRIDWGYSKPVVALDIMWNLAFVFASLGVLIHSADEKPNTPIRLWIVVYAVQCLVHAVLV 122
           RRIDWGYSKPVVALDI WNLAFVF SLGVLIHS  EKPNTPIRLWIVVYA QCLVH VLV
Sbjct: 67  RRIDWGYSKPVVALDITWNLAFVFVSLGVLIHSVHEKPNTPIRLWIVVYAAQCLVHVVLV 126

Query: 123 WFEFRRRNARRARDMETQH----NAYVANESDEEDGTPWNLSGVAKRCESVNTLISLIWW 182
           WFEF+RRNARRARDMETQ     + YV NESDE+DG   + S VAKRCESVNT++SLIWW
Sbjct: 127 WFEFKRRNARRARDMETQQQQEPDGYVTNESDEDDGGQRSFSSVAKRCESVNTMVSLIWW 186

Query: 183 LFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 242
           LFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFA+FCVVLACLIGIALCCCLPCIIAI
Sbjct: 187 LFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAI 246

Query: 243 LYAVAGQEGATDADLSMLPKYRYQVSNEPSSGDGLMVPIESSSRHLTTERVLLREDAECC 302
           LYAVAGQEGATDADLSMLPKYRY+VSNEPS GDGLMVP+E+SSR+LTTERVLL EDAECC
Sbjct: 247 LYAVAGQEGATDADLSMLPKYRYRVSNEPSPGDGLMVPVETSSRYLTTERVLLCEDAECC 306

Query: 303 ICLSPYEDGAELHALPCNHHFHYACITKWLKMNATCPLCK 338
           ICLSPYEDG ELHALPCNHHFHYACITKWLKMNATCPLCK
Sbjct: 307 ICLSPYEDGVELHALPCNHHFHYACITKWLKMNATCPLCK 346

[Close]
BLAST of CmoCh15G010280 vs. TrEMBL
Match: E5GB66_CUCME (Zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 603.2 bits (1554), Expect = 2.1e-169
Identity = 303/346 (87.57%), Postives = 316/346 (91.33%), Query Frame = 1 

Query: 1   MSSPS----MEAPAQQIPLLPSRHP-SNSDASTSPIGPLAVLFAHATGRRGTSMVVRETA 60
           MSSPS    M+ PAQQIPLLPSR P SNSDASTSPIGPLA+L   ATGRRGTSM+VRETA
Sbjct: 1   MSSPSFPSSMDPPAQQIPLLPSRQPPSNSDASTSPIGPLALLLGRATGRRGTSMLVRETA 60

Query: 61  ARELEERRIDWGYSKPVVALDIMWNLAFVFASLGVLIHSADEKPNTPIRLWIVVYAVQCL 120
           ARELEERRIDWGYSKPVVALDI WNLAFVF SLGVLI S  EKPNTPIRLWIVVYA QCL
Sbjct: 61  ARELEERRIDWGYSKPVVALDITWNLAFVFVSLGVLIRSVHEKPNTPIRLWIVVYAAQCL 120

Query: 121 VHAVLVWFEFRRRNARRARDMETQH----NAYVANESDEEDGTPWNLSGVAKRCESVNTL 180
           VH VLVWFEF+RRNARRARDMETQ     + YV NESDE+DG   +LS VAKRCESVNTL
Sbjct: 121 VHVVLVWFEFKRRNARRARDMETQQQQQPDGYVTNESDEDDGGQRSLSSVAKRCESVNTL 180

Query: 181 ISLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCL 240
           +SLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFA+FCVVLACLIGIALCCCL
Sbjct: 181 VSLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAVFCVVLACLIGIALCCCL 240

Query: 241 PCIIAILYAVAGQEGATDADLSMLPKYRYQVSNEPSSGDGLMVPIESSSRHLTTERVLLR 300
           PCIIAILYAVAGQEGATDADLSMLPKYRY+VSNEPS GDGLMVP+E+SSR+LTTERVLLR
Sbjct: 241 PCIIAILYAVAGQEGATDADLSMLPKYRYRVSNEPSPGDGLMVPVETSSRYLTTERVLLR 300

Query: 301 EDAECCICLSPYEDGAELHALPCNHHFHYACITKWLKMNATCPLCK 338
           EDAECCICLSPYEDG ELHALPCNHHFHYACITKWLKMNATCPLCK
Sbjct: 301 EDAECCICLSPYEDGVELHALPCNHHFHYACITKWLKMNATCPLCK 346

[Close]
BLAST of CmoCh15G010280 vs. TrEMBL
Match: A0A0D2Q7U9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G172200 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 1.2e-124
Identity = 227/327 (69.42%), Postives = 259/327 (79.20%), Query Frame = 1 

Query: 14  PLLPSRHPSNSDASTSPIGPLAVLFAHATGRRGTSMVVRETAARELEERRIDWGYSKPVV 73
           PLL SR    SDAS +    LA+L    TGRRG SM+VRETAARELEERR DWGYSKPVV
Sbjct: 20  PLLRSRQ---SDASAARSSALALLLGRVTGRRGASMLVRETAARELEERRADWGYSKPVV 79

Query: 74  ALDIMWNLAFVFASLGVLIHSADEKPNTPIRLWIVVYAVQCLVHAVLVWFEFRRRNARRA 133
           ALDI+WN AFV  S+ +LI + +E+PNTP+R+WI  YA+QC VH VLVW E++RRNARRA
Sbjct: 80  ALDILWNTAFVVVSVVMLICTVNERPNTPVRVWICGYALQCSVHVVLVWLEYKRRNARRA 139

Query: 134 RDMETQHNAYVANESDEEDGTPWNLSGVAKRCESVNTLISLIWWLFGFYWVVAGGNILMQ 193
                +    V +  D+ED    N S V KRCESVNTL S IWW+ GFYWV++GGNIL+Q
Sbjct: 140 SGRGEERGEDVTDSEDDEDS---NQSSVTKRCESVNTLASFIWWIVGFYWVISGGNILLQ 199

Query: 194 NAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATDADLS 253
            AP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGA++ADLS
Sbjct: 200 QAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLS 259

Query: 254 MLPKYRYQVSN---EPSSGDGLMVPIESSSRHLTTERVLLREDAECCICLSPYEDGAELH 313
           +LPKYR+Q+ N   +PS G G MVP+E+SS +L  ER+LL EDAECCICL  YEDG +LH
Sbjct: 260 ILPKYRFQIINIGEKPSVGVGKMVPVETSSGYLANERILLPEDAECCICLCSYEDGVDLH 319

Query: 314 ALPCNHHFHYACITKWLKMNATCPLCK 338
           ALPCNHHFH  CI KWLKMNATCPLCK
Sbjct: 320 ALPCNHHFHSTCIVKWLKMNATCPLCK 340

[Close]
BLAST of CmoCh15G010280 vs. TrEMBL
Match: A0A061EFM2_THECC (Zinc finger, C3HC4 type (RING finger) family protein isoform 1 OS=Theobroma cacao GN=TCM_011052 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 1.2e-124
Identity = 238/349 (68.19%), Postives = 271/349 (77.65%), Query Frame = 1 

Query: 1   MSSPSMEAPAQQIPLLPSRHPSNSDASTSPIGPLAVLFAHATGRRGTSMVVRETAARELE 60
           +S  +  A     PLL  R P   DAS +    LA+L   ATGRRG SM+VRETAARELE
Sbjct: 6   LSETTTVASDSHAPLLRPRQP---DASAARPATLALLLGRATGRRGASMLVRETAARELE 65

Query: 61  ERRIDWGYSKPVVALDIMWNLAFVFASLGVLIHSADEKPNTPIRLWIVVYAVQCLVHAVL 120
           ERR DWGYSKPVVALD++WN AFV  S+ +LI + DE+ NTPIRLWI  YA+QCLVH VL
Sbjct: 66  ERRADWGYSKPVVALDMLWNTAFVAVSVAMLICTVDERTNTPIRLWICGYALQCLVHVVL 125

Query: 121 VWFEFRRRNARR--ARDMET-QHNAYVANES-DEEDGTPW-----NLSGVAKRCESVNTL 180
           VW E+RRRN RR  ARD E     +  AN+S DE+DG        N S V KRCESVNT+
Sbjct: 126 VWLEYRRRNVRRTSARDEERGDATSGDANDSEDEQDGIERSAFGSNQSSVTKRCESVNTM 185

Query: 181 ISLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCL 240
           +S +WW+ GFYWVV+GGN L+QNAP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCL
Sbjct: 186 VSFLWWIVGFYWVVSGGNYLLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCL 245

Query: 241 PCIIAILYAVAGQEGATDADLSMLPKYRYQVSN---EPSSGDGLMVPIESSSRHLTTERV 300
           PCIIAILYAVAGQEGA++ADLS+LPKYR+Q+ N   + S G G MVP+E+SS +L  ER+
Sbjct: 246 PCIIAILYAVAGQEGASEADLSILPKYRFQIINNGGKASVGAGKMVPVETSSGYLANERI 305

Query: 301 LLREDAECCICLSPYEDGAELHALPCNHHFHYACITKWLKMNATCPLCK 338
           LL EDAECCICLS YEDGA+LHALPCNHHFH ACI KWLKMNATCPLCK
Sbjct: 306 LLPEDAECCICLSSYEDGADLHALPCNHHFHSACIVKWLKMNATCPLCK 351

[Close]
BLAST of CmoCh15G010280 vs. TrEMBL
Match: A0A059BE69_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02105 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 1.3e-123
Identity = 233/343 (67.93%), Postives = 267/343 (77.84%), Query Frame = 1 

Query: 11  QQIPLLPSRHPSNSD---ASTSPIGP----LAVLFAHATGRRGTSMVVRETAARELEERR 70
           QQ PLL SR  S +D   + +S  GP    LAVL   A GRRG SM+VRETAARELE+RR
Sbjct: 23  QQAPLLASRQGSGADDGGSGSSDSGPRQPSLAVLLGRAAGRRGPSMLVRETAARELEQRR 82

Query: 71  IDWGYSKPVVALDIMWNLAFVFASLGVLIHSADEKPNTPIRLWIVVYAVQCLVHAVLVWF 130
            DWGYS+PVVALDIMWN AFV  S+ +L+ +ADE PNTPIRLWI  YA QCLVH VLVW 
Sbjct: 83  ADWGYSRPVVALDIMWNTAFVLVSVVMLVVTADEHPNTPIRLWICGYAAQCLVHVVLVWI 142

Query: 131 EFRRRNARRARDMETQHNA-YVANESDEEDGTPWNL-----SGVAKRCESVNTLISLIWW 190
           E+RRR+ARR RD E Q N  YV +  DEE G    L     S V KRCES+NT+ S +WW
Sbjct: 143 EYRRRSARRVRDEERQQNYNYVNDSEDEEAGVDAALGSTAQSNVTKRCESINTMASFLWW 202

Query: 191 LFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 250
           + GFYWVV+GG+IL+  AP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI
Sbjct: 203 IVGFYWVVSGGDILLAEAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 262

Query: 251 LYAVAGQEGATDADLSMLPKYRYQV-SNEPSS--GDGLMVPIESSSRHLTTERVLLREDA 310
           LYAVAGQEGA++ADLS+LPKY++ + SN   +  G G MVP+E++S +L  +R+LL EDA
Sbjct: 263 LYAVAGQEGASEADLSILPKYKFHILSNGEKTVVGAGKMVPVETTSGYLANDRLLLPEDA 322

Query: 311 ECCICLSPYEDGAELHALPCNHHFHYACITKWLKMNATCPLCK 338
           ECCICL+ YEDGAELHALPCNHHFH  CI KWLKMNATCPLCK
Sbjct: 323 ECCICLTSYEDGAELHALPCNHHFHSTCIVKWLKMNATCPLCK 365

[Close]
BLAST of CmoCh15G010280 vs. TAIR10
Match: AT1G68070.1 (AT1G68070.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 419.5 bits (1077), Expect = 2.2e-117
Identity = 220/343 (64.14%), Postives = 260/343 (75.80%), Query Frame = 1 

Query: 1   MSSP-SMEAPAQQIPLLPSRHPSNSDASTSPIGPLAVLFAHATGRRGTSMVVRETAAREL 60
           MSSP S        PLL SR    S     P+  +AVL   A+GRRG SMVVRETAA+EL
Sbjct: 1   MSSPESPSGSDSSTPLLRSRQ---SSPRRQPV--IAVLLNRASGRRGASMVVRETAAQEL 60

Query: 61  EERRIDWGYSKPVVALDIMWNLAFVFASLGVLIHSADEKPNTPIRLWIVVYAVQCLVHAV 120
           EERR DWGYSKPVVALD++WN AFV  ++ +L+   +EKPN PIR+WI  YA+QCLVH V
Sbjct: 61  EERRADWGYSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVV 120

Query: 121 LVWFEFRRRNAR-RARDMETQHNAYVANE-SDEEDGTPWNLSGVAKRCESVNTLISLIWW 180
           LVW EFR+RNAR R  D+E    A   N+ S++ED     LS   K CES+NT+IS +WW
Sbjct: 121 LVWLEFRKRNARSRPGDLEA---AQATNQDSEDEDNDERFLS--TKTCESMNTIISFVWW 180

Query: 181 LFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 240
           + GFYW+V+GG+IL+QNA  LYWL  VFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA+
Sbjct: 181 IVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAL 240

Query: 241 LYAVAGQEGATDADLSMLPKYRYQVSN---EPSSGDGLMVPIESSSRHLTTERVLLREDA 300
           LYAVAGQEGA++ADLS+LPKYR+   N   + S G G M+P++++S +L  ERVLL EDA
Sbjct: 241 LYAVAGQEGASEADLSILPKYRFHTMNNDEKQSDGGGKMIPVDAASENLGNERVLLPEDA 300

Query: 301 ECCICLSPYEDGAELHALPCNHHFHYACITKWLKMNATCPLCK 338
           +CCICLS YEDGAEL +LPCNHHFH  CI KWLKMNATCPLCK
Sbjct: 301 DCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCK 333

[Close]
BLAST of CmoCh15G010280 vs. TAIR10
Match: AT2G01735.1 (AT2G01735.1 RING-finger protein for embryogenesis)

HSP 1 Score: 406.4 bits (1043), Expect = 1.9e-113
Identity = 211/346 (60.98%), Postives = 252/346 (72.83%), Query Frame = 1 

Query: 2   SSPSMEAPAQQIPLLPSRHPSNSDASTSPIGP--LAVLFAHATGRRGTSMVVRETAAREL 61
           SS S  A  Q  PLL  RH  +  +S+S   P  LAVL    TG R  SM+VRETAAR L
Sbjct: 5   SSDSTAARDQHAPLLRPRHDGSFSSSSSSARPTALAVLLGRITGHRAPSMLVRETAARAL 64

Query: 62  EERRIDWGYSKPVVALDIMWNLAFVFASLGVLIHSADEKPNTPIRLWIVVYAVQCLVHAV 121
           EERRIDWGYSKPVVA DI+WN A V AS  +L+ + +E+PN PIR+WI VY +QCL H V
Sbjct: 65  EERRIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVV 124

Query: 122 LVWFEFRRRNA-RRARDMET----QHNAYVANESDEEDGTPWNLSGVAKRCESVNTLISL 181
           LVW E+ RRN+ RRARD+E+     +N     E D +D +        KRCES+NT+IS 
Sbjct: 125 LVWSEYWRRNSTRRARDLESYDHEDYNIEYDYEQDSDDNS--TTYSFVKRCESINTVISF 184

Query: 182 IWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 241
           IWW+ GFYWVV GG+ L+  AP+LYWL+V+FLA DVFFA+FCVVLACL+GIALCCCLPCI
Sbjct: 185 IWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCI 244

Query: 242 IAILYAVAGQEGATDADLSMLPKYRYQV--SNEPS-SGDGLMVPIESSSRHLTTERVLLR 301
           IA+LYAVAG EG ++A+L +LP Y+++   SNE + +G G MVPI  +   L TER LL 
Sbjct: 245 IALLYAVAGTEGVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLA 304

Query: 302 EDAECCICLSPYEDGAELHALPCNHHFHYACITKWLKMNATCPLCK 338
           EDA+CCICLS YEDGAELHALPCNHHFH  CI KWLKM ATCPLCK
Sbjct: 305 EDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCK 348

[Close]
BLAST of CmoCh15G010280 vs. TAIR10
Match: AT1G63170.1 (AT1G63170.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 325.1 bits (832), Expect = 5.5e-89
Identity = 172/337 (51.04%), Postives = 216/337 (64.09%), Query Frame = 1 

Query: 35  AVLFAHAT-GR---RGTSMVVRETAARELEERRIDWGYSKPVVALDIMWNLAFVFASLGV 94
           A L  HA+ GR   R  SM+VRE AA +LEER+ DW YSKPVV LD +WNLAFV  +  V
Sbjct: 33  ARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAV 92

Query: 95  LIHSADEKPNTPIRLWIVVYAVQCLVHAVLVWFEFRRRNARRARDMETQHNAYVANES-- 154
           L+ S+DE PN P+R+WI+ Y +QC++H V V  E+RRRN+RR RD+  + ++  ++ S  
Sbjct: 93  LVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSS 152

Query: 155 -DEEDGTPWNLSG----------------VAKRCESVNTLISLIWWLFGFYWVVAGGNIL 214
            DEE+G   + +                  AK  ES NT+IS IWW+ GFYWV +GG  L
Sbjct: 153 MDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQEL 212

Query: 215 MQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATDAD 274
            Q +P LYWL +VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGA+  D
Sbjct: 213 AQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASKED 272

Query: 275 LSMLPKYRYQ---------VSNEPSSGD--GLMVPIESSSRHLTTERVLLREDAECCICL 334
           +  L K++++         V  E   GD  G+M    + S     E  L  EDAECCICL
Sbjct: 273 IDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDS---PVEHALPHEDAECCICL 332

Query: 335 SPYEDGAELHALPCNHHFHYACITKWLKMNATCPLCK 338
           S YED  EL  LPC HHFH  C+ KWL +NATCPLCK
Sbjct: 333 SAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCK 366

[Close]
BLAST of CmoCh15G010280 vs. TAIR10
Match: AT4G11680.1 (AT4G11680.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 320.5 bits (820), Expect = 1.4e-87
Identity = 169/332 (50.90%), Postives = 206/332 (62.05%), Query Frame = 1 

Query: 20  HPSNSDASTSPIGPLAVLFAHATGRR---GTSMVVRETAARELEERRIDWGYSKPVVALD 79
           +P +  A    +   A    HA  RR     SM+VRETAA +LEER+ DW YSKPVV LD
Sbjct: 54  NPIHRSARRQGLREAARFLRHAGSRRMMREPSMLVRETAAEQLEERQSDWAYSKPVVFLD 113

Query: 80  IMWNLAFVFASLGVLIHSADEKPNTPIRLWIVVYAVQCLVHAVLVWFEFRRRNARRARD- 139
           I+WNLAFV   + VLI S DEKPN P+R+W+V Y +QC +H   V  E+RRR  RR  + 
Sbjct: 114 ILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHPED 173

Query: 140 ------METQHNAYVANESDEEDGTPWNLSGVAKRCESVNTLISLIWWLFGFYWVVAGGN 199
                   +    YV+    E+ G     S  AK  ES NT+ S IWW+ GFYWV AGG 
Sbjct: 174 GGGSGLTNSSSQQYVSLAQLEDRG---ETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQ 233

Query: 200 ILMQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATD 259
            L  ++P LYWL ++FL FDVFF +FCV LAC+IG+A+CCCLPCIIAILYAVA QEGA+ 
Sbjct: 234 TLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVADQEGASK 293

Query: 260 ADLSMLPKYRY----QVSNEPSSGDGLMVPIESSSRHLTTERVLLREDAECCICLSPYED 319
            D+  +PK+R+     V        G+M    + S     ER L  EDAECCICL  YED
Sbjct: 294 NDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDS---PIERSLSPEDAECCICLCEYED 353

Query: 320 GAELHALPCNHHFHYACITKWLKMNATCPLCK 338
           G EL  LPCNHHFH  CI KWL +N+ CPLCK
Sbjct: 354 GVELRELPCNHHFHCTCIDKWLHINSRCPLCK 379

[Close]
BLAST of CmoCh15G010280 vs. TAIR10
Match: AT1G12760.1 (AT1G12760.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 314.3 bits (804), Expect = 9.8e-86
Identity = 162/325 (49.85%), Postives = 210/325 (64.62%), Query Frame = 1 

Query: 45  RGTSMVVRETAARELEERRIDWGYSKPVVALDIMWNLAFVFASLGVLIHSADEKPNTPIR 104
           R  SM+VRE AA +LEER+ DW YSKPVV LDI+WNLAFV  +  +L+ S  E P  P+R
Sbjct: 73  REPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLR 132

Query: 105 LWIVVYAVQCLVHAVLVWFEFRRRNARRA---------RDMETQHNAYVANESDEEDGTP 164
           +W++ YA+QC++H V V  E+RRRN RR          R   +  ++  ++  +E  G+ 
Sbjct: 133 VWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSR 192

Query: 165 WNL--------------SGVAKRCESVNTLISLIWWLFGFYWVVAGGNILMQNAPSLYWL 224
            N               S VAK  ES NT+ S IWW+ GFYWV AGG  L Q +P +YWL
Sbjct: 193 RNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWL 252

Query: 225 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATDADLSMLPKYRYQ 284
           ++VFL FDVFF +FCV LAC+IGIA+CCCLPCIIA+LYAVA QEGA+  D+  L K++++
Sbjct: 253 SIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFR 312

Query: 285 V-------SNEPSSG--DGLMVPIESSSRHLTTERVLLREDAECCICLSPYEDGAELHAL 338
                   +N+ + G  +G+M    + S     E  LL+EDAECCICLS YEDG EL  L
Sbjct: 313 KLGDANKHTNDEAQGTTEGIMTECGTDS---PIEHTLLQEDAECCICLSAYEDGTELREL 372

[Close]
BLAST of CmoCh15G010280 vs. NCBI nr
Match: gi|449465805|ref|XP_004150618.1| (PREDICTED: E3 ubiquitin protein ligase RIE1 [Cucumis sativus])

HSP 1 Score: 603.6 bits (1555), Expect = 2.3e-169
Identity = 299/340 (87.94%), Postives = 313/340 (92.06%), Query Frame = 1 

Query: 3   SPSMEAPAQQIPLLPSRHP-SNSDASTSPIGPLAVLFAHATGRRGTSMVVRETAARELEE 62
           SPSM+ PAQQIPLLPSR P SNSDASTSPIGPLA+L   ATGRRGTSM+VRETAARELEE
Sbjct: 7   SPSMDPPAQQIPLLPSRQPPSNSDASTSPIGPLALLLGRATGRRGTSMLVRETAARELEE 66

Query: 63  RRIDWGYSKPVVALDIMWNLAFVFASLGVLIHSADEKPNTPIRLWIVVYAVQCLVHAVLV 122
           RRIDWGYSKPVVALDI WNLAFVF SLGVLIHS  EKPNTPIRLWIVVYA QCLVH VLV
Sbjct: 67  RRIDWGYSKPVVALDITWNLAFVFVSLGVLIHSVHEKPNTPIRLWIVVYAAQCLVHVVLV 126

Query: 123 WFEFRRRNARRARDMETQH----NAYVANESDEEDGTPWNLSGVAKRCESVNTLISLIWW 182
           WFEF+RRNARRARDMETQ     + YV NESDE+DG   + S VAKRCESVNT++SLIWW
Sbjct: 127 WFEFKRRNARRARDMETQQQQEPDGYVTNESDEDDGGQRSFSSVAKRCESVNTMVSLIWW 186

Query: 183 LFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAI 242
           LFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFA+FCVVLACLIGIALCCCLPCIIAI
Sbjct: 187 LFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAI 246

Query: 243 LYAVAGQEGATDADLSMLPKYRYQVSNEPSSGDGLMVPIESSSRHLTTERVLLREDAECC 302
           LYAVAGQEGATDADLSMLPKYRY+VSNEPS GDGLMVP+E+SSR+LTTERVLL EDAECC
Sbjct: 247 LYAVAGQEGATDADLSMLPKYRYRVSNEPSPGDGLMVPVETSSRYLTTERVLLCEDAECC 306

Query: 303 ICLSPYEDGAELHALPCNHHFHYACITKWLKMNATCPLCK 338
           ICLSPYEDG ELHALPCNHHFHYACITKWLKMNATCPLCK
Sbjct: 307 ICLSPYEDGVELHALPCNHHFHYACITKWLKMNATCPLCK 346

[Close]
BLAST of CmoCh15G010280 vs. NCBI nr
Match: gi|659072757|ref|XP_008467019.1| (PREDICTED: E3 ubiquitin protein ligase RIE1 [Cucumis melo])

HSP 1 Score: 603.2 bits (1554), Expect = 3.0e-169
Identity = 303/346 (87.57%), Postives = 316/346 (91.33%), Query Frame = 1 

Query: 1   MSSPS----MEAPAQQIPLLPSRHP-SNSDASTSPIGPLAVLFAHATGRRGTSMVVRETA 60
           MSSPS    M+ PAQQIPLLPSR P SNSDASTSPIGPLA+L   ATGRRGTSM+VRETA
Sbjct: 1   MSSPSFPSSMDPPAQQIPLLPSRQPPSNSDASTSPIGPLALLLGRATGRRGTSMLVRETA 60

Query: 61  ARELEERRIDWGYSKPVVALDIMWNLAFVFASLGVLIHSADEKPNTPIRLWIVVYAVQCL 120
           ARELEERRIDWGYSKPVVALDI WNLAFVF SLGVLI S  EKPNTPIRLWIVVYA QCL
Sbjct: 61  ARELEERRIDWGYSKPVVALDITWNLAFVFVSLGVLIRSVHEKPNTPIRLWIVVYAAQCL 120

Query: 121 VHAVLVWFEFRRRNARRARDMETQH----NAYVANESDEEDGTPWNLSGVAKRCESVNTL 180
           VH VLVWFEF+RRNARRARDMETQ     + YV NESDE+DG   +LS VAKRCESVNTL
Sbjct: 121 VHVVLVWFEFKRRNARRARDMETQQQQQPDGYVTNESDEDDGGQRSLSSVAKRCESVNTL 180

Query: 181 ISLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCL 240
           +SLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFA+FCVVLACLIGIALCCCL
Sbjct: 181 VSLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAVFCVVLACLIGIALCCCL 240

Query: 241 PCIIAILYAVAGQEGATDADLSMLPKYRYQVSNEPSSGDGLMVPIESSSRHLTTERVLLR 300
           PCIIAILYAVAGQEGATDADLSMLPKYRY+VSNEPS GDGLMVP+E+SSR+LTTERVLLR
Sbjct: 241 PCIIAILYAVAGQEGATDADLSMLPKYRYRVSNEPSPGDGLMVPVETSSRYLTTERVLLR 300

Query: 301 EDAECCICLSPYEDGAELHALPCNHHFHYACITKWLKMNATCPLCK 338
           EDAECCICLSPYEDG ELHALPCNHHFHYACITKWLKMNATCPLCK
Sbjct: 301 EDAECCICLSPYEDGVELHALPCNHHFHYACITKWLKMNATCPLCK 346

[Close]
BLAST of CmoCh15G010280 vs. NCBI nr
Match: gi|731369246|ref|XP_010651669.1| (PREDICTED: E3 ubiquitin protein ligase RIE1 [Vitis vinifera])

HSP 1 Score: 454.9 bits (1169), Expect = 1.3e-124
Identity = 231/335 (68.96%), Postives = 264/335 (78.81%), Query Frame = 1 

Query: 14  PLLPSRHPSNSDASTSPIGPLAVLFAHATGRRGTSMVVRETAARELEERRIDWGYSKPVV 73
           PLL  R    ++ S  P   LA+L   ATGRRG SM+VRETAARELEERR DWGYSKPVV
Sbjct: 13  PLLRPRQ-GTAEQSARPT-TLALLMGRATGRRGPSMLVRETAARELEERRADWGYSKPVV 72

Query: 74  ALDIMWNLAFVFASLGVLIHSADEKPNTPIRLWIVVYAVQCLVHAVLVWFEFRRRNARRA 133
           ALD+MWN++FV  S+ +LI +A E+PNTPIRLWI  YA+QC VH VLVW E+RRRN RR 
Sbjct: 73  ALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRRV 132

Query: 134 RDMETQ----HNAYVANESDEEDGTP-----WNLSGVAKRCESVNTLISLIWWLFGFYWV 193
           RD E Q    H+    N+S++EDG       +N S V KRCESVNT+ S +WW+ GFYWV
Sbjct: 133 RDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWV 192

Query: 194 VAGGNILMQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 253
           V+GG  L+QNAP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ
Sbjct: 193 VSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 252

Query: 254 EGATDADLSMLPKYRYQVSNEPSS--GDGLMVPIESSSRHLTTERVLLREDAECCICLSP 313
           EGA++ADLSMLP+YR++ +NE  S  G G M+P E+SS +L  ER+LL EDAECCICLS 
Sbjct: 253 EGASEADLSMLPRYRFEANNEEKSGVGAGTMIPTETSSGYLANERILLPEDAECCICLSS 312

Query: 314 YEDGAELHALPCNHHFHYACITKWLKMNATCPLCK 338
           YEDGAELHALPCNHHFH  CI KWLKMNATCPLCK
Sbjct: 313 YEDGAELHALPCNHHFHSTCIAKWLKMNATCPLCK 345

[Close]
BLAST of CmoCh15G010280 vs. NCBI nr
Match: gi|823134807|ref|XP_012467204.1| (PREDICTED: E3 ubiquitin protein ligase RIE1 isoform X1 [Gossypium raimondii])

HSP 1 Score: 454.5 bits (1168), Expect = 1.7e-124
Identity = 227/327 (69.42%), Postives = 259/327 (79.20%), Query Frame = 1 

Query: 14  PLLPSRHPSNSDASTSPIGPLAVLFAHATGRRGTSMVVRETAARELEERRIDWGYSKPVV 73
           PLL SR    SDAS +    LA+L    TGRRG SM+VRETAARELEERR DWGYSKPVV
Sbjct: 20  PLLRSRQ---SDASAARSSALALLLGRVTGRRGASMLVRETAARELEERRADWGYSKPVV 79

Query: 74  ALDIMWNLAFVFASLGVLIHSADEKPNTPIRLWIVVYAVQCLVHAVLVWFEFRRRNARRA 133
           ALDI+WN AFV  S+ +LI + +E+PNTP+R+WI  YA+QC VH VLVW E++RRNARRA
Sbjct: 80  ALDILWNTAFVVVSVVMLICTVNERPNTPVRVWICGYALQCSVHVVLVWLEYKRRNARRA 139

Query: 134 RDMETQHNAYVANESDEEDGTPWNLSGVAKRCESVNTLISLIWWLFGFYWVVAGGNILMQ 193
                +    V +  D+ED    N S V KRCESVNTL S IWW+ GFYWV++GGNIL+Q
Sbjct: 140 SGRGEERGEDVTDSEDDEDS---NQSSVTKRCESVNTLASFIWWIVGFYWVISGGNILLQ 199

Query: 194 NAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATDADLS 253
            AP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGA++ADLS
Sbjct: 200 QAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLS 259

Query: 254 MLPKYRYQVSN---EPSSGDGLMVPIESSSRHLTTERVLLREDAECCICLSPYEDGAELH 313
           +LPKYR+Q+ N   +PS G G MVP+E+SS +L  ER+LL EDAECCICL  YEDG +LH
Sbjct: 260 ILPKYRFQIINIGEKPSVGVGKMVPVETSSGYLANERILLPEDAECCICLCSYEDGVDLH 319

Query: 314 ALPCNHHFHYACITKWLKMNATCPLCK 338
           ALPCNHHFH  CI KWLKMNATCPLCK
Sbjct: 320 ALPCNHHFHSTCIVKWLKMNATCPLCK 340

[Close]
BLAST of CmoCh15G010280 vs. NCBI nr
Match: gi|590696813|ref|XP_007045267.1| (Zinc finger, C3HC4 type (RING finger) family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 454.5 bits (1168), Expect = 1.7e-124
Identity = 238/349 (68.19%), Postives = 271/349 (77.65%), Query Frame = 1 

Query: 1   MSSPSMEAPAQQIPLLPSRHPSNSDASTSPIGPLAVLFAHATGRRGTSMVVRETAARELE 60
           +S  +  A     PLL  R P   DAS +    LA+L   ATGRRG SM+VRETAARELE
Sbjct: 6   LSETTTVASDSHAPLLRPRQP---DASAARPATLALLLGRATGRRGASMLVRETAARELE 65

Query: 61  ERRIDWGYSKPVVALDIMWNLAFVFASLGVLIHSADEKPNTPIRLWIVVYAVQCLVHAVL 120
           ERR DWGYSKPVVALD++WN AFV  S+ +LI + DE+ NTPIRLWI  YA+QCLVH VL
Sbjct: 66  ERRADWGYSKPVVALDMLWNTAFVAVSVAMLICTVDERTNTPIRLWICGYALQCLVHVVL 125

Query: 121 VWFEFRRRNARR--ARDMET-QHNAYVANES-DEEDGTPW-----NLSGVAKRCESVNTL 180
           VW E+RRRN RR  ARD E     +  AN+S DE+DG        N S V KRCESVNT+
Sbjct: 126 VWLEYRRRNVRRTSARDEERGDATSGDANDSEDEQDGIERSAFGSNQSSVTKRCESVNTM 185

Query: 181 ISLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCL 240
           +S +WW+ GFYWVV+GGN L+QNAP LYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCL
Sbjct: 186 VSFLWWIVGFYWVVSGGNYLLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCL 245

Query: 241 PCIIAILYAVAGQEGATDADLSMLPKYRYQVSN---EPSSGDGLMVPIESSSRHLTTERV 300
           PCIIAILYAVAGQEGA++ADLS+LPKYR+Q+ N   + S G G MVP+E+SS +L  ER+
Sbjct: 246 PCIIAILYAVAGQEGASEADLSILPKYRFQIINNGGKASVGAGKMVPVETSSGYLANERI 305

Query: 301 LLREDAECCICLSPYEDGAELHALPCNHHFHYACITKWLKMNATCPLCK 338
           LL EDAECCICLS YEDGA+LHALPCNHHFH ACI KWLKMNATCPLCK
Sbjct: 306 LLPEDAECCICLSSYEDGADLHALPCNHHFHSACIVKWLKMNATCPLCK 351

The following BLAST results are available for this feature:
BLAST of CmoCh15G010280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RIE1_ARATH3.3e-11260.98E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1[more]
RING2_ARATH9.8e-8851.04E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 ... [more]
RING4_ARATH2.4e-8650.90E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 ... [more]
RING1_ARATH1.7e-8449.85E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 ... [more]
RNF44_DANRE5.1e-1235.05RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1[more]
BLAST of CmoCh15G010280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRG7_CUCSA1.6e-16987.94Uncharacterized protein OS=Cucumis sativus GN=Csa_5G561780 PE=4 SV=1[more]
E5GB66_CUCME2.1e-16987.57Zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0D2Q7U9_GOSRA1.2e-12469.42Uncharacterized protein OS=Gossypium raimondii GN=B456_002G172200 PE=4 SV=1[more]
A0A061EFM2_THECC1.2e-12468.19Zinc finger, C3HC4 type (RING finger) family protein isoform 1 OS=Theobroma caca... [more]
A0A059BE69_EUCGR1.3e-12367.93Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02105 PE=4 SV=1[more]
BLAST of CmoCh15G010280 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68070.12.2e-11764.14 Zinc finger, C3HC4 type (RING finger) family protein[more]
AT2G01735.11.9e-11360.98 RING-finger protein for embryogenesis[more]
AT1G63170.15.5e-8951.04 Zinc finger, C3HC4 type (RING finger) family protein[more]
AT4G11680.11.4e-8750.90 Zinc finger, C3HC4 type (RING finger) family protein[more]
AT1G12760.19.8e-8649.85 Zinc finger, C3HC4 type (RING finger) family protein[more]
BLAST of CmoCh15G010280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449465805|ref|XP_004150618.1|2.3e-16987.94PREDICTED: E3 ubiquitin protein ligase RIE1 [Cucumis sativus][more]
gi|659072757|ref|XP_008467019.1|3.0e-16987.57PREDICTED: E3 ubiquitin protein ligase RIE1 [Cucumis melo][more]
gi|731369246|ref|XP_010651669.1|1.3e-12468.96PREDICTED: E3 ubiquitin protein ligase RIE1 [Vitis vinifera][more]
gi|823134807|ref|XP_012467204.1|1.7e-12469.42PREDICTED: E3 ubiquitin protein ligase RIE1 isoform X1 [Gossypium raimondii][more]
gi|590696813|ref|XP_007045267.1|1.7e-12468.19Zinc finger, C3HC4 type (RING finger) family protein isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G010280.1CmoCh15G010280.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 295..337
score: 1.1
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 296..336
score: 2.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 296..337
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 292..338
score: 2.8
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 291..337
score: 5.7E-183coord: 3..268
score: 5.7E
NoneNo IPR availablePANTHERPTHR14155:SF73SUBFAMILY NOT NAMEDcoord: 291..337
score: 5.7E-183coord: 3..268
score: 5.7E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 283..340
score: 2.52