Cp4.1LG01g16280 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g16280
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description60S ribosomal protein L3
LocationCp4.1LG01 : 10077044 .. 10081373 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCTCAAGCACGCCGACCACCGTACGACAGTTGGGCTGCTGCTGAGAACCAGAGAAACGAGTTCCTATATATTCGACTGCGACAAGGTAGCGTTGGATTCCAGGGTTACGGTTCATGGATTCTGCTTCCTCCTTATCGCCAGGGAGATCTTCGTTCGTAGTCTTTCCAATTTTCAATGGCCTTTGAGGTGATGAATCGGAACTGAACTCTAGCCTATGCTTCTGGTTCTCCGTCATTGATTTCCGCCGCTCCCGCCAAGATTATGAGAATCGAACACTGATTCCAAAGCTTAAACAATGTAGCAAGTGTTCTCGCGGAAGTTTAAAGGTTGAACTCCGCCATGAGTTGAACAAGTTCCCAAGGTAGACGATGGAGGTTTGCTTCGCTAGGTCGTATTCGCCGTTTTAATTTTCCACATGTCGAATGACAGTTCGACATGTCGTCTCAATGCTCACGTGCTTCTCAGTTATAAACACATGGGCTTGGGCTTCAAATGGGCTCATATTTTATAAGCCCAATACGATTTAAAAGTAGCCCTAGCCCAATTATGTTGCGAGAGAACCCTAATTTCTTCCCTTGTATCACTTAATTCATGCGCCGCACAGCGTAGCAGCCAAATTGTAGCGGCGGCATCCATTATATAGGTCCCCTAAATTGGAAGTAGAAACCTTAACTCGAGTTACGAAGGCACAGCCCTGTTCTTCACCTCTCTATTCCCAGTGTCAGGTATAACAGTTTCGATAAGTATGGTCGCCATTGAATTCACGGTTATATTACTCGATTTACTAAGACTATAGTTTGTTCATTCCATCTCTAACCTCTACTTGCAGGATCTCTTATTTCCCTTTGCAGTATACTTTAATTTGTTTTGTCTCTTTGGATTTGACGTGAAATGGGCTCTGGTGAATCGATCTGTAACTTTACCATTGTAGATTATGTTTTTGATTTATTGTTACTACGACGCTGAAGAAAGTATGTTATCTGGAGGATATTTTTATTGCAACAAATGCATCTGGAGGATTGAAAATCTAAACACAGGCCTTGTATTTCTGGAATTTTGTTTTTTTTATCCCCGACTGTTGTTCCATTCATGTTTTTCCGGTTAAATTCCAATATTCCTAATGACAGTCGAAATGGCTTCCCCATAAAAAACTATGAATAATCAGGGCTGGAGTCTAGAACAGGCTCTTTCTCCAAAGCCAATTTATTGGTTTTTGGGTTGAAACACGGATGAGCCTGAGTTTTGGCATTATCTAGTGCCATAGGCCACTGGTTGGGGTTCATTTTGATGTCTGCAGGATGATGGAACCTGAAACTAGGAAAACATGAACCTGGAACCTGTTTTTCTTGCATCCTTATTTTGAGATTTTAAGATTTTGCATCCTGGTACTTGTTATCCGTATTTTGAGATTTTTTGTTGCACTCTAATTAACGTAAGTTGGTCGACGCAAAACTATCTGTTTTTTCTTCTGTTTATGGTTTTCCTTAATTTTTACGAATGTTCTGTTTTGGCCTATCGTTATCTATTATTTTGTACCATCTAGTTTATATGTTTTTTATTTGAAATGTTATGCTTAATTACCCTTTGAAAGAAGAACCCCTGGAACGTTTGGTCTTTTTGGGATGACGTTAATGGATCTATTAAACATCATTGAAATTTGGTAGTTTCCAATTAATTGCAATAGGAACGCAATATGTCTCACCGCAAGTTTGAGCACCCAAGACATGGCTCTTTGGGATTTCTTCCCAGAAAGAGAGCTTCTCGCCATAGAGGGAAAGGTATTGGTTCTGTGCTAGATCTTATTTTATGACTTATAGTTTTAGATTATTGTATTTGTATAGATCATTCACATTGTTTTTTATTCGGCATGTAACAAGTCAGTTGTCTGTCTTTTAATTTACACTGGTTTGATCGTTCCTAGTGCTTCATTCAGTTGTCTGTCCTTTTTATATTGTAGTCAGCTGAGTATTTTCTTCTTTAATTAGTGCTTCTCACTCTGATCAGATGTAGCTCAGGCATATTGCTGGATGCTTTGTTCTTTCATTGAATCCTTGCATAAGCTTTCCATGTTTCGATTTTAAATGCATGTTTACTTTTTTTTTATAAAAAAAAATTCATGTGATGATATACTGTAAAGCATTACAGCACGCATTGCGTGTACTAAATTCATTTGATATTCATTTGATATTCTTTAGCTCAATGTTGTTATCTGATGGTGACTTGTACTTTGCAGTGAAGGCATTTCCCAGAGATGATCCTTCGAAGCCTTGTAGATTAACTGCTTTCCTTGGATACAAGGCTGGAATGACTCATATTGTCAGAGAAGTTGAAAAGCCTGGATCAAGTGAGTCTGGTTGTAAGATATTTATATCTAGATTATGAAAATGATATAGGAGTATATAGCAATATATCCAACAGGTTCCTAGTTATGGCTGTTTCTCTACGTCACCATTGCGTAGCTTATATTGTGTTGGTCAATCTTGTGTTAGGCCTTCTATTTAGATTAAATTTCCCTTTTGCAATGTGATGTGAAAACTTATGGTAGACAATCCTGTTTTATTTTGTTTCTATTTCTAAAATCTGTTGGATTATTGATTTGTCTTATGATCCTCTCAGAGTTGCACAAGAAAGAAACATGTGAAGCTGTAACAATTATAGAAACTCCCCCTATGGTTGTTGTTGGTGTTGTTGGCTATGTCAAAACGCCACGAGGCTTGCGTTCATTGAAAACTGTATGGGCCCAGCATTTGAGCGAGGAGGTAAAGAGGAGATTTTACAAGAACTGGTGTAAGTCTAAGAAGAAAGCTTTCTCTAAGTACTCAAAGAAGTTTGAGACTGAAGATGGAAAAAAGGATATTCTGGCACAGTTGGAGAAATTGAAGAAATATGGCACTGTGATTCGTGTTCTGGCCCATTCCCAGGTATTTTGCTCTTCCCAAATATTACATGATGAACGACTTGAATATTGTACTTTTCTCCCCTTCCGTTTAATGTTGATCGACCTGAAAATTTGAACCGTTGCAAAATATTGTTAATATTTGATATGTAGTACTATGTTTAAGTACCCACTTTAAGAAGATCGACTTTGTTTCAGATAAGGAAGATGCAAGGACTAAAGCAAAAGAAAGCTCACTTGATGGAAATTCAGGTGAATGGTGGAGATGTTTCTAAGAAGGTTGATTATGCATATAGTTTATTTGAGAAGCAGATCCCTGTTGATGCAATCTTCCAAAAGGATGAGATGATTGATATTATTGGGGTAACTAAAGGAAAAGGTTATGAAGGTGTGGTTACCCGTTGGGGTGTCACTCGTCTCCCCCGCAAGACCCATCGTGGCCTTCGCAAGGTAGCCTGTATTGGTGCTTGGCATCCAGCCAGAGTGTCATTCACTGTTGCTCGAGCTGGGCAGAATGGTTACCATCATCGCACAGAGATGAATAAGAAGGTTTATAAGGTTGGGAAGACTGGCCAAGACTCCCATTCTGCTATGACCGAGTTCGATAGGTTAGTCAACATGTGCCTTCCCTTTTTGGCTTTTACTTATCTTTTCTTGAATTACTGCTACTGATGTTTGTGGATATTTATTCTTATTAGGACTGAGAAGGATATAACTCCAATTGGTGGATTTCCTCACTATGGTGTGGTCAAAGAGGATTACTTGATGATCAAGGGCTGTTGTGTGGGTCCAAAAAAGCGTGTGGTCACATTGAGGCAGTCACTGATTAAGCAGACTTCTAGGGTTGCTATGGAGGAAATCAAACTGAAATTCATCGACACTTCCTCCAAGTTTGGCCATGGACGGTTTCAGACAACACAGGAGAAGGCTAAGTTTTATGGACGAGTCAAGTAGGTGTTGCGTGCGACTGATTTTTTTTTGTCTCGATGATTTGGGTTTCTTCATTTTAAACATGTAACGTTTTCAGACTTGGGAAAGGTGTTGTTTAATGTTATGATGACTATTCATCCTTGGTGTTCAATCTGTTCTTCAATCCTCCAACTAGTCGTCTGGTGGTGTTGCGACTCCGTACTCAGCTGCTTGTTTTGGATCCTGCTCCCTTTTTCTTGACCCAGTTTGTCTTCATTCAACATTTTTGTATACACCACACCCAGTGAGATCAAATAGAAAGCGGCACCAATTTGAACACGTTTCTGTGCTGTTCTAAATTCAAACAGGGTTTCAATATGAACATAAATGAGAAGAACATGGAATATTTGGCGTCCATTCCTTCCATTCTTCTTTTCAATTCAAACAGGGTTTCAATATGAACATAAATGAGAAGAACATGGAATATTTGGCGTCCATTCCTTCCATTCTTCTTTTCATTGAT

mRNA sequence

TACCTCAAGCACGCCGACCACCGTACGACAGTTGGGCTGCTGCTGAGAACCAGAGAAACGAGTTCCTATATATTCGACTGCGACAAGGTAGCGTTGGATTCCAGGGTTACGGTTCATGGATTCTGCTTCCTCCTTATCGCCAGGGAGATCTTCGTTCGTAGTCTTTCCAATTTTCAATGGCCTTTGAGGTGATGAATCGGAACTGAACTCTAGCCTATGCTTCTGGTTCTCCGTCATTGATTTCCGCCGCTCCCGCCAAGATTATGAGAATCGAACACTGATTCCAAAGCTTAAACAATGTAGCAAGTGTTCTCGCGGAAGTTTAAAGGTTGAACTCCGCCATGAGTTGAACAAGTTCCCAAGGTAGACGATGGAGGTTTGCTTCGCTAGGTCGTATTCGCCGTTTTAATTTTCCACATGTCGAATGACAGTTCGACATGTCGTCTCAATGCTCACGTGCTTCTCAGTTATAAACACATGGGCTTGGGCTTCAAATGGGCTCATATTTTATAAGCCCAATACGATTTAAAAGTAGCCCTAGCCCAATTATGTTGCGAGAGAACCCTAATTTCTTCCCTTGTATCACTTAATTCATGCGCCGCACAGCGTAGCAGCCAAATTGTAGCGGCGGCATCCATTATATAGGTCCCCTAAATTGGAAGTAGAAACCTTAACTCGAGTTACGAAGGCACAGCCCTGTTCTTCACCTCTCTATTCCCAGTGTCAGGAACGCAATATGTCTCACCGCAAGTTTGAGCACCCAAGACATGGCTCTTTGGGATTTCTTCCCAGAAAGAGAGCTTCTCGCCATAGAGGGAAAGTGAAGGCATTTCCCAGAGATGATCCTTCGAAGCCTTGTAGATTAACTGCTTTCCTTGGATACAAGGCTGGAATGACTCATATTGTCAGAGAAGTTGAAAAGCCTGGATCAAAGTTGCACAAGAAAGAAACATGTGAAGCTGTAACAATTATAGAAACTCCCCCTATGGTTGTTGTTGGTGTTGTTGGCTATGTCAAAACGCCACGAGGCTTGCGTTCATTGAAAACTGTATGGGCCCAGCATTTGAGCGAGGAGGTAAAGAGGAGATTTTACAAGAACTGGTGTAAGTCTAAGAAGAAAGCTTTCTCTAAGTACTCAAAGAAGTTTGAGACTGAAGATGGAAAAAAGGATATTCTGGCACAGTTGGAGAAATTGAAGAAATATGGCACTGTGATTCGTGTTCTGGCCCATTCCCAGATAAGGAAGATGCAAGGACTAAAGCAAAAGAAAGCTCACTTGATGGAAATTCAGGTGAATGGTGGAGATGTTTCTAAGAAGGTTGATTATGCATATAGTTTATTTGAGAAGCAGATCCCTGTTGATGCAATCTTCCAAAAGGATGAGATGATTGATATTATTGGGGTAACTAAAGGAAAAGGTTATGAAGGTGTGGTTACCCGTTGGGGTGTCACTCGTCTCCCCCGCAAGACCCATCGTGGCCTTCGCAAGGTAGCCTGTATTGGTGCTTGGCATCCAGCCAGAGTGTCATTCACTGTTGCTCGAGCTGGGCAGAATGGTTACCATCATCGCACAGAGATGAATAAGAAGGTTTATAAGGTTGGGAAGACTGGCCAAGACTCCCATTCTGCTATGACCGAGTTCGATAGGACTGAGAAGGATATAACTCCAATTGGTGGATTTCCTCACTATGGTGTGGTCAAAGAGGATTACTTGATGATCAAGGGCTGTTGTGTGGGTCCAAAAAAGCGTGTGGTCACATTGAGGCAGTCACTGATTAAGCAGACTTCTAGGGTTGCTATGGAGGAAATCAAACTGAAATTCATCGACACTTCCTCCAAGTTTGGCCATGGACGGTTTCAGACAACACAGGAGAAGGCTAAGTTTTATGGACGAGTCAAGTAGGTGTTGCGTGCGACTGATTTTTTTTTGTCTCGATGATTTGGGTTTCTTCATTTTAAACATGTAACGTTTTCAGACTTGGGAAAGGTGTTGTTTAATGTTATGATGACTATTCATCCTTGGTGTTCAATCTGTTCTTCAATCCTCCAACTAGTCGTCTGGTGGTGTTGCGACTCCGTACTCAGCTGCTTGTTTTGGATCCTGCTCCCTTTTTCTTGACCCAGTTTGTCTTCATTCAACATTTTTGTATACACCACACCCAGTGAGATCAAATAGAAAGCGGCACCAATTTGAACACGTTTCTGTGCTGTTCTAAATTCAAACAGGGTTTCAATATGAACATAAATGAGAAGAACATGGAATATTTGGCGTCCATTCCTTCCATTCTTCTTTTCAATTCAAACAGGGTTTCAATATGAACATAAATGAGAAGAACATGGAATATTTGGCGTCCATTCCTTCCATTCTTCTTTTCATTGAT

Coding sequence (CDS)

ATGTCTCACCGCAAGTTTGAGCACCCAAGACATGGCTCTTTGGGATTTCTTCCCAGAAAGAGAGCTTCTCGCCATAGAGGGAAAGTGAAGGCATTTCCCAGAGATGATCCTTCGAAGCCTTGTAGATTAACTGCTTTCCTTGGATACAAGGCTGGAATGACTCATATTGTCAGAGAAGTTGAAAAGCCTGGATCAAAGTTGCACAAGAAAGAAACATGTGAAGCTGTAACAATTATAGAAACTCCCCCTATGGTTGTTGTTGGTGTTGTTGGCTATGTCAAAACGCCACGAGGCTTGCGTTCATTGAAAACTGTATGGGCCCAGCATTTGAGCGAGGAGGTAAAGAGGAGATTTTACAAGAACTGGTGTAAGTCTAAGAAGAAAGCTTTCTCTAAGTACTCAAAGAAGTTTGAGACTGAAGATGGAAAAAAGGATATTCTGGCACAGTTGGAGAAATTGAAGAAATATGGCACTGTGATTCGTGTTCTGGCCCATTCCCAGATAAGGAAGATGCAAGGACTAAAGCAAAAGAAAGCTCACTTGATGGAAATTCAGGTGAATGGTGGAGATGTTTCTAAGAAGGTTGATTATGCATATAGTTTATTTGAGAAGCAGATCCCTGTTGATGCAATCTTCCAAAAGGATGAGATGATTGATATTATTGGGGTAACTAAAGGAAAAGGTTATGAAGGTGTGGTTACCCGTTGGGGTGTCACTCGTCTCCCCCGCAAGACCCATCGTGGCCTTCGCAAGGTAGCCTGTATTGGTGCTTGGCATCCAGCCAGAGTGTCATTCACTGTTGCTCGAGCTGGGCAGAATGGTTACCATCATCGCACAGAGATGAATAAGAAGGTTTATAAGGTTGGGAAGACTGGCCAAGACTCCCATTCTGCTATGACCGAGTTCGATAGGACTGAGAAGGATATAACTCCAATTGGTGGATTTCCTCACTATGGTGTGGTCAAAGAGGATTACTTGATGATCAAGGGCTGTTGTGTGGGTCCAAAAAAGCGTGTGGTCACATTGAGGCAGTCACTGATTAAGCAGACTTCTAGGGTTGCTATGGAGGAAATCAAACTGAAATTCATCGACACTTCCTCCAAGTTTGGCCATGGACGGTTTCAGACAACACAGGAGAAGGCTAAGTTTTATGGACGAGTCAAGTAG

Protein sequence

MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYKNWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAHLMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMTEFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKLKFIDTSSKFGHGRFQTTQEKAKFYGRVK
Homology
[Close]
BLAST of Cp4.1LG01g16280 vs. Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4)

HSP 1 Score: 716.8 bits (1849), Expect = 1.2e-205
Identity = 345/386 (89.38%), Postives = 375/386 (97.15%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDP+KPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSL TVWAQHLSEE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NW KSKKKAF++YSKK ETE+GKKDI +QLEK+KKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           L EIQ+NGGD++KKVDYA SLFEKQ+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY+VGK GQ++HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           E+DRTEKDITP+GGFPHYG+VKEDYLMIKGCCVGPKKRVVTLRQ+L+KQTSR+AMEEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGR 387
           KFID +S  GHGRFQT+QEKAKFYGR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386

[Close]
BLAST of Cp4.1LG01g16280 vs. Swiss-Prot
Match: RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2)

HSP 1 Score: 698.0 bits (1800), Expect = 5.9e-200
Identity = 328/388 (84.54%), Postives = 370/388 (95.36%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DD SKPC LT+F+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPP+V+VG+V YVKTPRGLRSL +VWAQHLSEEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAF+KY+ K++++ GKK+I  QLEK+KKY +++RV+AH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQ+NGG ++ KVDY Y  FEK+IPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK+GQ+SH+A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITP+GGFPHYGVVK DYLMIKGCCVGPKKRVVTLRQSL+KQTSR+A+EEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTT EK +F+G++K
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQRFFGKLK 388

[Close]
BLAST of Cp4.1LG01g16280 vs. Swiss-Prot
Match: RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5)

HSP 1 Score: 689.9 bits (1779), Expect = 1.6e-197
Identity = 325/387 (83.98%), Postives = 368/387 (95.09%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETP MVVVGVV YVKTPRGLRSL TVWAQHLSEEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NW KSKKKAF+ Y+K++++EDGKK I AQLEK+KKY TVIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG +++KVD+AYS FEKQIP++A+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y++GK G ++H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           E+DRTEKD+TP+GGFPHYG+VK+DYLMIKGCCVGPKKRVVTLRQSL+ QTSR+A+EEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]
BLAST of Cp4.1LG01g16280 vs. Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2)

HSP 1 Score: 551.6 bits (1420), Expect = 6.9e-156
Identity = 269/394 (68.27%), Postives = 331/394 (84.01%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FP+DDPSKP  LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           ++PGSK++KKE  EAVTI+ETPPMVVVG+VGYV+TPRGLR+ KTV+A+H+S+E KRRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NW KSKKKAF+KY KK++ EDGKK +      +KKY  VIRV+AH+Q+R +  L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG V++K+D+A    E+Q+PV+ +F +DEMID+IGVTKGKGY+GV +RW   +
Sbjct: 181 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVG-----KTGQ-D 300
           LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G     K G+  
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 300

Query: 301 SHSAMTEFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVA 360
            ++A T++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+SL+ QT R A
Sbjct: 301 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 360

Query: 361 MEEIKLKFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           +E+I LKFIDT+SKFGHGRFQT +EK  F G +K
Sbjct: 361 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393

[Close]
BLAST of Cp4.1LG01g16280 vs. Swiss-Prot
Match: RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 547.7 bits (1410), Expect = 9.9e-155
Identity = 266/394 (67.51%), Postives = 330/394 (83.76%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FP+DDPSKP  LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           ++PGSK++KKE  EAVTI+ETPPMVVVG+VGYV+TPRGLR+ KTV+A+H+S+E KRRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NW KSKKKAF+KY KK++ + GKK +      +KKY  VIR++AH+Q+R +  L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG V++K+D+A    E+Q+PV+ +F +DEMID+IGVTKGKGY+GV +RW   +
Sbjct: 181 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVG-----KTGQ-D 300
           LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G     K G+  
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 300

Query: 301 SHSAMTEFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVA 360
            ++A T++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR+SL+ QT R A
Sbjct: 301 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 360

Query: 361 MEEIKLKFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           +E+I LKFIDT+SKFGHGRFQT +EK  F G +K
Sbjct: 361 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393

[Close]
BLAST of Cp4.1LG01g16280 vs. TrEMBL
Match: A0A0A0KT85_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G586000 PE=3 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 4.3e-213
Identity = 366/388 (94.33%), Postives = 378/388 (97.42%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDD SKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDSSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIE PPMVVVGVVGY++TPRGLRS KTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYIRTPRGLRSFKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWC SKKKAF+KYSKK+ETEDGKKDI +QL+ L+K+ TVIRVLAHSQIRKMQGLKQKKAH
Sbjct: 121 NWCMSKKKAFTKYSKKYETEDGKKDIQSQLDSLRKHSTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDV KKVDYAYSLFEKQ+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVPKKVDYAYSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQDSHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITPIGGFPHYG+VKEDYLMIKG C GPKKRVVTLRQSLIKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGIVKEDYLMIKGGCAGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKA+FYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFYGRVK 388

[Close]
BLAST of Cp4.1LG01g16280 vs. TrEMBL
Match: W9QLL9_9ROSA (60S ribosomal protein L3 OS=Morus notabilis GN=L484_001372 PE=3 SV=1)

HSP 1 Score: 746.9 bits (1927), Expect = 1.2e-212
Identity = 359/388 (92.53%), Postives = 382/388 (98.45%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDP+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVT+IETPPMVVVGVVGY+KTPRGLR L TVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTVIETPPMVVVGVVGYIKTPRGLRCLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAF+KYSKK+ET+DGKKDI AQLEKLKKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKKYETDDGKKDIQAQLEKLKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGD++KKVD+AY+ FEKQIP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDIAKKVDFAYNFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK GQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQESHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITPIGGFPHYGVVKED+LMIKGCCVGPKKRVVTLRQSL+KQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDFLMIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKA+FYGR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFYGRLK 388

[Close]
BLAST of Cp4.1LG01g16280 vs. TrEMBL
Match: A5BAZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042376 PE=3 SV=1)

HSP 1 Score: 745.3 bits (1923), Expect = 3.6e-212
Identity = 361/388 (93.04%), Postives = 381/388 (98.20%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFL RKRA+RHRGKVKAFP+DDP+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLXRKRAARHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGY+KTPRGLRSL TVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAF+KYSKK+E+EDGKKDI AQLEK+KKY  VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDV+KKVDYAY  FEKQIP+DAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKVGKTGQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITP+GGFPHYGVVK+DYL+IKGCCVGPKKRVVTLRQSL+KQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKAKF+GR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFFGRLK 388

[Close]
BLAST of Cp4.1LG01g16280 vs. TrEMBL
Match: A0A059ATX9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02767 PE=3 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 4.4e-210
Identity = 358/388 (92.27%), Postives = 380/388 (97.94%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DD +KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVT+IETPPMVVVG+VGYVKTPRGLRSL TVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTMIETPPMVVVGLVGYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAF+KY+KK+E+EDGKKDI +QLEKLKKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYTKKYESEDGKKDIQSQLEKLKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG V++KVDYAY  FEKQIPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVAQKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKVGK GQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKLYKVGKAGQESHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITP+GGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSL+KQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKA+F+GR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFFGRLK 388

[Close]
BLAST of Cp4.1LG01g16280 vs. TrEMBL
Match: M5XYC3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006946mg PE=3 SV=1)

HSP 1 Score: 737.6 bits (1903), Expect = 7.5e-210
Identity = 355/388 (91.49%), Postives = 380/388 (97.94%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DDP+K C LTAFLGYKAGMTHI+R+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKSCSLTAFLGYKAGMTHIMRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSL TVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLDTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAF+KYSKKFE+E GKKDI AQLEK+KKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKFESEGGKKDIQAQLEKMKKYSSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGD++KKVDYAYSLFEKQIPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDIAKKVDYAYSLFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK GQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKVGQESHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITP+GGFPHYG VKEDYL++KGCCVGPKKRVVTLRQSL+KQTSRVA+E+IKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGAVKEDYLLMKGCCVGPKKRVVTLRQSLLKQTSRVALEDIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKA+FYGR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFYGRLK 388

[Close]
BLAST of Cp4.1LG01g16280 vs. TAIR10
Match: AT1G61580.1 (AT1G61580.1 R-protein L3 B)

HSP 1 Score: 716.8 bits (1849), Expect = 7.0e-207
Identity = 345/386 (89.38%), Postives = 375/386 (97.15%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDP+KPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSL TVWAQHLSEE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NW KSKKKAF++YSKK ETE+GKKDI +QLEK+KKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           L EIQ+NGGD++KKVDYA SLFEKQ+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY+VGK GQ++HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           E+DRTEKDITP+GGFPHYG+VKEDYLMIKGCCVGPKKRVVTLRQ+L+KQTSR+AMEEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGR 387
           KFID +S  GHGRFQT+QEKAKFYGR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386

[Close]
BLAST of Cp4.1LG01g16280 vs. TAIR10
Match: AT1G43170.1 (AT1G43170.1 ribosomal protein 1)

HSP 1 Score: 689.9 bits (1779), Expect = 9.1e-199
Identity = 325/387 (83.98%), Postives = 368/387 (95.09%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETP MVVVGVV YVKTPRGLRSL TVWAQHLSEEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NW KSKKKAF+ Y+K++++EDGKK I AQLEK+KKY TVIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG +++KVD+AYS FEKQIP++A+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y++GK G ++H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           E+DRTEKD+TP+GGFPHYG+VK+DYLMIKGCCVGPKKRVVTLRQSL+ QTSR+A+EEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]
BLAST of Cp4.1LG01g16280 vs. NCBI nr
Match: gi|659090351|ref|XP_008445969.1| (PREDICTED: 60S ribosomal protein L3-2 [Cucumis melo])

HSP 1 Score: 758.4 bits (1957), Expect = 5.9e-216
Identity = 370/388 (95.36%), Postives = 380/388 (97.94%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIE PPMVVVGVVGY+KTPRGLRS KTVWAQHLSEE+KRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYIKTPRGLRSFKTVWAQHLSEELKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWC SKKKAF+KYSKK+ETEDGKKDI +QLE L+K+ TVIRVLAHSQIRKMQGLKQKKAH
Sbjct: 121 NWCMSKKKAFTKYSKKYETEDGKKDIQSQLESLRKHSTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDV KKVDYAYSLFEKQ+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVPKKVDYAYSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQDSHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITPIGGFPHYG+VKEDYLMIKGCC GPKKRVVTLRQSLIKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGIVKEDYLMIKGCCAGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]
BLAST of Cp4.1LG01g16280 vs. NCBI nr
Match: gi|449435140|ref|XP_004135353.1| (PREDICTED: 60S ribosomal protein L3-2 [Cucumis sativus])

HSP 1 Score: 748.4 bits (1931), Expect = 6.1e-213
Identity = 366/388 (94.33%), Postives = 378/388 (97.42%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDD SKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDSSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIE PPMVVVGVVGY++TPRGLRS KTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYIRTPRGLRSFKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWC SKKKAF+KYSKK+ETEDGKKDI +QL+ L+K+ TVIRVLAHSQIRKMQGLKQKKAH
Sbjct: 121 NWCMSKKKAFTKYSKKYETEDGKKDIQSQLDSLRKHSTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDV KKVDYAYSLFEKQ+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVPKKVDYAYSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQDSHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITPIGGFPHYG+VKEDYLMIKG C GPKKRVVTLRQSLIKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGIVKEDYLMIKGGCAGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKA+FYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFYGRVK 388

[Close]
BLAST of Cp4.1LG01g16280 vs. NCBI nr
Match: gi|703067255|ref|XP_010087922.1| (60S ribosomal protein L3 [Morus notabilis])

HSP 1 Score: 746.9 bits (1927), Expect = 1.8e-212
Identity = 359/388 (92.53%), Postives = 382/388 (98.45%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDP+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVT+IETPPMVVVGVVGY+KTPRGLR L TVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTVIETPPMVVVGVVGYIKTPRGLRCLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAF+KYSKK+ET+DGKKDI AQLEKLKKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKKYETDDGKKDIQAQLEKLKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGD++KKVD+AY+ FEKQIP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDIAKKVDFAYNFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK GQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQESHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITPIGGFPHYGVVKED+LMIKGCCVGPKKRVVTLRQSL+KQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDFLMIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKA+FYGR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFYGRLK 388

[Close]
BLAST of Cp4.1LG01g16280 vs. NCBI nr
Match: gi|359486157|ref|XP_002263053.2| (PREDICTED: 60S ribosomal protein L3-2 isoform X1 [Vitis vinifera])

HSP 1 Score: 746.5 bits (1926), Expect = 2.3e-212
Identity = 361/388 (93.04%), Postives = 381/388 (98.20%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DDP+ PCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTNPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGY+KTPRGLRSL TVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAF+KYSKK+E+EDGKKDI AQLEK+KKY  VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDV+KKVDYAY  FEKQIP+DAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKVGKTGQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITP+GGFPHYGVVK+DYL+IKGCCVGPKKRVVTLRQSL+KQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKAKF+GR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFFGRLK 388

[Close]
BLAST of Cp4.1LG01g16280 vs. NCBI nr
Match: gi|147865994|emb|CAN83050.1| (hypothetical protein VITISV_042376 [Vitis vinifera])

HSP 1 Score: 745.3 bits (1923), Expect = 5.2e-212
Identity = 361/388 (93.04%), Postives = 381/388 (98.20%), Query Frame = 1 

Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFL RKRA+RHRGKVKAFP+DDP+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLXRKRAARHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGY+KTPRGLRSL TVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180
           NWCKSKKKAF+KYSKK+E+EDGKKDI AQLEK+KKY  VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDV+KKVDYAY  FEKQIP+DAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKVGKTGQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMT 300

Query: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
           EFDRTEKDITP+GGFPHYGVVK+DYL+IKGCCVGPKKRVVTLRQSL+KQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKAKF+GR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFFGRLK 388

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g16280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL32_ARATH1.2e-20589.3860S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4[more]
RL3_ORYSJ5.9e-20084.5460S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2[more]
RL31_ARATH1.6e-19783.9860S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5[more]
RL3_HUMAN6.9e-15668.2760S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2[more]
RL3_RAT9.9e-15567.5160S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3[more]
BLAST of Cp4.1LG01g16280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KT85_CUCSA4.3e-21394.33Uncharacterized protein OS=Cucumis sativus GN=Csa_5G586000 PE=3 SV=1[more]
W9QLL9_9ROSA1.2e-21292.5360S ribosomal protein L3 OS=Morus notabilis GN=L484_001372 PE=3 SV=1[more]
A5BAZ0_VITVI3.6e-21293.04Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042376 PE=3 SV=1[more]
A0A059ATX9_EUCGR4.4e-21092.27Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02767 PE=3 SV=1[more]
M5XYC3_PRUPE7.5e-21091.49Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006946mg PE=3 SV=1[more]
BLAST of Cp4.1LG01g16280 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G61580.17.0e-20789.38 R-protein L3 B[more]
AT1G43170.19.1e-19983.98 ribosomal protein 1[more]
BLAST of Cp4.1LG01g16280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090351|ref|XP_008445969.1|5.9e-21695.36PREDICTED: 60S ribosomal protein L3-2 [Cucumis melo][more]
gi|449435140|ref|XP_004135353.1|6.1e-21394.33PREDICTED: 60S ribosomal protein L3-2 [Cucumis sativus][more]
gi|703067255|ref|XP_010087922.1|1.8e-21292.5360S ribosomal protein L3 [Morus notabilis][more]
gi|359486157|ref|XP_002263053.2|2.3e-21293.04PREDICTED: 60S ribosomal protein L3-2 isoform X1 [Vitis vinifera][more]
gi|147865994|emb|CAN83050.1|5.2e-21293.04hypothetical protein VITISV_042376 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR019926Ribosomal_L3_CS
IPR009000Transl_B-barrel_sf
IPR000597Ribosomal_L3
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0052546 cell wall pectin metabolic process
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0052541 plant-type cell wall cellulose metabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0016020 membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g16280.1Cp4.1LG01g16280.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000597Ribosomal protein L3PFAMPF00297Ribosomal_L3coord: 1..370
score: 2.2E
IPR009000Translation protein, beta-barrel domainunknownSSF50447Translation proteinscoord: 4..370
score: 1.06E
IPR019926Ribosomal protein L3, conserved sitePROSITEPS00474RIBOSOMAL_L3coord: 212..235
scor
NoneNo IPR availableGENE3DG3DSA:2.40.30.10coord: 233..370
score: 1.4E-48coord: 44..92
score: 7.0
NoneNo IPR availableGENE3DG3DSA:3.30.1430.10coord: 93..208
score: 1.2
NoneNo IPR availablePANTHERPTHR1136360S RIBOSOMAL PROTEIN L3-RELATEDcoord: 1..388
score:
NoneNo IPR availablePANTHERPTHR11363:SF660S RIBOSOMAL PROTEIN L3-2coord: 1..388
score: