Carg25941 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25941
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	60S ribosomal protein L3
Location	Cucurbita_argyrosperma_scaffold_263 : 176800 .. 179256 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCACCGCAAGTTTGAGCACCCAAGACATGGCTCTTTGGGGTTTCTTCCCAGAAAGAGAGCTTCTCGCCATAGAGGGAAAGGTATTAGCAATCTTTCTGTGCTAGATCTTATTTTATGACTAATAGTTTTAGATTATTGTATTTGTATAGATCATTCATATTGTTTTTTATTCGGCATGTAACAAGTCAGTTGTCAGTCTTTTAATTTACACTGGTTTGATCGTTCCAAGTGCTTCAATCAGTTTTTCCTTTTTATATTGTAGTCATCTGAGTATTTTCTTCTGTAATTAGTGCTTCTCACTCTGATCAGATGTAGCTCAGGCATATTGCTGGATGCTTTGTTCTTTCATTGTATCCTTGCATAAGCTTTCCATGTTTCGATTTTAAATGCATGTTTACTTTAAAAAAAAAATCATGTGATGATATACTGGAAAGCATTACAACACGCATTGCGTGTACTAAACATATTTGATATTCATTTGATATTCTTTAGCTCAATGTTATTATCTGATGGTGACTTGTACTTTGCAGTGAAGGCATTTCCCAGAGATGATCCTTCGAAGCCTTGTAGATTAACTGCTTTCCTTGGATACAAGGCTGGAATGACTCATATTGTCAGAGAAGTTGAAAAGCCTGGATCAAGTGAGTCTTGTGGAAAGATATTTATATCTAGATTATGAAAATGATATAGATGCATATAGCAACATATCCAACAGCTGCCTAGTTATGGCTGTTTCTCTACGGCACCATTGCGTAGCTTATATTGTTTTGGTTACTCTTGTGTTAGGCCTTCTATTTAGATTAAATTTCCCTTCTGCAATGTGATGTGAAAACTTATGGTAGACAATCCTGTTTTATTTTGTTTCTATTTCTAAAATCTGTTGGATTATTGATTTTAGTCTTATGATTCTCTCAGAGTTACACAAGAAAGAAACATGTGAAGCTGTAACAATTGTAGAAACGCCCCCTATGGTTGTTGTCGGTGTTGTTGGCTATGTCAAAACGCCACGAGGTTTGCGTTCATTGAAAACTGTATGGGCCCAGCATTTAAGTGAGGAGGTAAAGCGGAGATTTTATAAGAACTGGTGCAAGTCTAAGAAGAAAGCTTTCTCTAAGTACTCAAAGAAGTTTGAGACCGAAGATGGAAAGAAGGATATTCTCGCACAGTTGGAGAAATTGAAGAAATACGGCACTGTGATTCGTGTTCTGGCCCATTCCCAGGTATTTTGTGCTTCCCAAAAATTTGAACCGTTGCAAAATTTTGTTAATATTTGATATGTAGTTCTATGTTTTAGTACCCACTTTAAGAGGATGGACTTTGTTTCAGATAAGGAAGATGCGAGGACTAAAGCAAAAGAAAGCTCACTTGATGGAAATTCAGGTGAATGGTGGAGATGTTTCTAAGAAAGTTGATTATGCATATAGTTTATTTGAGAAGCAGATCCCTGTTGATGCGATCTTCCAAAAGGATGAGATGATTGATATTATTGGGGTAACTAAAGGAAAAGGTTATGAAGGTGTGGTGACCCGTTGGGGTGTCACTCGTCTCCCCCGCAAGACCCATCGTGGCCTTCGCAAGGTAGCCTGTATTGGTGCTTGGCATCCAGCCAGAGTGTCATTCACTGTTGCTCGAGCAGGGCAGAATGGTTACCATCATCGCACTGAGATGAATAAGAAGGTTTATAAGGTTGGGAAGACCGGCCAAGACTCCCATTCTGCTATGACCGAGTTCGATAGGTTAGTCAACATGTGCCTTCCCCTTTTTGGCTTTTACTTATCTTTTCTTGAATTACTGCTACTGATGTTTGTGGATATTTATTCTTTTTAGGACTGAGAGGGACATAACTCCAATTGGCGGATTCCCTCACTATGGTGTGGTCAAAGAGGATTACTTGATGATCAAGGGCTGTTGTGTGGGTCCAAAAAAGCGTGTTGTCACATTGAGGCAGTCACGGATTAAGCAGACGTCTAGGGTTGCTATGGAGGAAATCAAACTGAAATTCATCGACACTTCCTCCAAGTTTGGCCATGGACGGTTTCAGACAACACAGGAGAAGGCTAAGTTTTATGGACGAGTCAAGTAGGTGTTGCGGGCGACTGATTTTTTTTTTTCTCTCGATGATTTGGGTTTCTTCATTTTAAACATGTAACAACGTTTTCAGACTTGGGAAAGGTGTTTAATGTTATGATGACTATTCATCCTTGGTGTTCAATCTGTTCTTCAATCCTCCGCCTAGTCGTCTGGTGGTGTTGTGACTCCGTACTCAGCTGCTTGTTTTGTATCCTGCACCCTTTTTCTTGACCCAGTTTGTCTTCATTCAACATTTTTGTATGCACCCAGTGAGATCAAATAGAAAGCGGCACCAATTTGAACACGTTTCTGTGCTGTTCTAATTTCAAACAGGGTTTCAGTATGAACATAAATGAGAAGAACATGGAATATTCGGCGTCCA

mRNA sequence

ATGTCTCACCGCAAGTTTGAGCACCCAAGACATGGCTCTTTGGGGTTTCTTCCCAGAAAGAGAGCTTCTCGCCATAGAGGGAAAGTGAAGGCATTTCCCAGAGATGATCCTTCGAAGCCTTGTAGATTAACTGCTTTCCTTGGATACAAGGCTGGAATGACTCATATTGTCAGAGAAGTTGAAAAGCCTGGATCAAAGTTACACAAGAAAGAAACATGTGAAGCTGTAACAATTGTAGAAACGCCCCCTATGGTTGTTGTCGGTGTTGTTGGCTATGTCAAAACGCCACGAGGTTTGCGTTCATTGAAAACTGTATGGGCCCAGCATTTAAGTGAGGAGGTAAAGCGGAGATTTTATAAGAACTGGTGCAAGTCTAAGAAGAAAGCTTTCTCTAAGTACTCAAAGAAGTTTGAGACCGAAGATGGAAAGAAGGATATTCTCGCACAGTTGGAGAAATTGAAGAAATACGGCACTGTGATTCGTGTTCTGGCCCATTCCCAGATAAGGAAGATGCGAGGACTAAAGCAAAAGAAAGCTCACTTGATGGAAATTCAGGTGAATGGTGGAGATGTTTCTAAGAAAGTTGATTATGCATATAGTTTATTTGAGAAGCAGATCCCTGTTGATGCGATCTTCCAAAAGGATGAGATGATTGATATTATTGGGGTAACTAAAGGAAAAGGTTATGAAGGTGTGGTGACCCGTTGGGGTGTCACTCGTCTCCCCCGCAAGACCCATCGTGGCCTTCGCAAGGTAGCCTGTATTGGTGCTTGGCATCCAGCCAGAGTGTCATTCACTGTTGCTCGAGCAGGGCAGAATGGTTACCATCATCGCACTGAGATGAATAAGAAGGTTTATAAGGTTGGGAAGACCGGCCAAGACTCCCATTCTGCTATGACCGAGTTCGATAGGACTGAGAGGGACATAACTCCAATTGGCGGATTCCCTCACTATGGTGTGGTCAAAGAGGATTACTTGATGATCAAGGGCTGTTGTGTGGGTCCAAAAAAGCGTGTTGTCACATTGAGGCAGTCACGGATTAAGCAGACGTCTAGGGTTGCTATGGAGGAAATCAAACTGAAATTCATCGACACTTCCTCCAAGTTTGGCCATGGACGGTTTCAGACAACACAGGAGAAGGCTAAGTTTTATGGACGAGTCAAGTAGGTGTTGCGGGCGACTGATTTTTTTTTTTCTCTCGATGATTTGGGTTTCTTCATTTTAAACATGTAACAACGTTTTCAGACTTGGGAAAGGTGTTTAATGTTATGATGACTATTCATCCTTGGTGTTCAATCTGTTCTTCAATCCTCCGCCTAGTCGTCTGGTGGTGTTGTGACTCCGTACTCAGCTGCTTGTTTTGTATCCTGCACCCTTTTTCTTGACCCAGTTTGTCTTCATTCAACATTTTTGTATGCACCCAGTGAGATCAAATAGAAAGCGGCACCAATTTGAACACGTTTCTGTGCTGTTCTAATTTCAAACAGGGTTTCAGTATGAACATAAATGAGAAGAACATGGAATATTCGGCGTCCA

Coding sequence (CDS)

ATGTCTCACCGCAAGTTTGAGCACCCAAGACATGGCTCTTTGGGGTTTCTTCCCAGAAAGAGAGCTTCTCGCCATAGAGGGAAAGTGAAGGCATTTCCCAGAGATGATCCTTCGAAGCCTTGTAGATTAACTGCTTTCCTTGGATACAAGGCTGGAATGACTCATATTGTCAGAGAAGTTGAAAAGCCTGGATCAAAGTTACACAAGAAAGAAACATGTGAAGCTGTAACAATTGTAGAAACGCCCCCTATGGTTGTTGTCGGTGTTGTTGGCTATGTCAAAACGCCACGAGGTTTGCGTTCATTGAAAACTGTATGGGCCCAGCATTTAAGTGAGGAGGTAAAGCGGAGATTTTATAAGAACTGGTGCAAGTCTAAGAAGAAAGCTTTCTCTAAGTACTCAAAGAAGTTTGAGACCGAAGATGGAAAGAAGGATATTCTCGCACAGTTGGAGAAATTGAAGAAATACGGCACTGTGATTCGTGTTCTGGCCCATTCCCAGATAAGGAAGATGCGAGGACTAAAGCAAAAGAAAGCTCACTTGATGGAAATTCAGGTGAATGGTGGAGATGTTTCTAAGAAAGTTGATTATGCATATAGTTTATTTGAGAAGCAGATCCCTGTTGATGCGATCTTCCAAAAGGATGAGATGATTGATATTATTGGGGTAACTAAAGGAAAAGGTTATGAAGGTGTGGTGACCCGTTGGGGTGTCACTCGTCTCCCCCGCAAGACCCATCGTGGCCTTCGCAAGGTAGCCTGTATTGGTGCTTGGCATCCAGCCAGAGTGTCATTCACTGTTGCTCGAGCAGGGCAGAATGGTTACCATCATCGCACTGAGATGAATAAGAAGGTTTATAAGGTTGGGAAGACCGGCCAAGACTCCCATTCTGCTATGACCGAGTTCGATAGGACTGAGAGGGACATAACTCCAATTGGCGGATTCCCTCACTATGGTGTGGTCAAAGAGGATTACTTGATGATCAAGGGCTGTTGTGTGGGTCCAAAAAAGCGTGTTGTCACATTGAGGCAGTCACGGATTAAGCAGACGTCTAGGGTTGCTATGGAGGAAATCAAACTGAAATTCATCGACACTTCCTCCAAGTTTGGCCATGGACGGTTTCAGACAACACAGGAGAAGGCTAAGTTTTATGGACGAGTCAAGTAG

Protein sequence

MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYKNWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAHLMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMTEFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKLKFIDTSSKFGHGRFQTTQEKAKFYGRVK

Homology

[Close]

BLAST of Carg25941 vs. NCBI nr
Match: XP_023547361.1 (60S ribosomal protein L3-2 [Cucurbita pepo subsp. pepo] >XP_023547362.1 60S ribosomal protein L3-2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 778.1 bits (2008), Expect = 1.4e-221
Identity = 384/388 (98.97%), Postives = 387/388 (99.74%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300

Query: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360
           EFDRTE+DITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQS IKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]

BLAST of Carg25941 vs. NCBI nr
Match: XP_022957236.1 (60S ribosomal protein L3-2 [Cucurbita moschata])

HSP 1 Score: 776.2 bits (2003), Expect = 5.3e-221
Identity = 383/388 (98.71%), Postives = 386/388 (99.48%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NWCKSKKKAFSKYSKKFETEDG KDILAQLEKLKKYGTVIRVLAHSQIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKKFETEDGNKDILAQLEKLKKYGTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300

Query: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360
           EFDRTE+DITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQS IKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]

BLAST of Carg25941 vs. NCBI nr
Match: XP_022998082.1 (60S ribosomal protein L3-2 [Cucurbita maxima])

HSP 1 Score: 772.3 bits (1993), Expect = 7.7e-220
Identity = 381/388 (98.20%), Postives = 384/388 (98.97%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NWCKSKKKAFSKYSKKFETEDGKKDILAQ EKLKKY TVIRVLAHSQIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300

Query: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360
           EFDRTE+DITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLR S IKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]

BLAST of Carg25941 vs. NCBI nr
Match: XP_008445969.1 (PREDICTED: 60S ribosomal protein L3-2 [Cucumis melo])

HSP 1 Score: 753.1 bits (1943), Expect = 4.8e-214
Identity = 366/388 (94.33%), Postives = 379/388 (97.68%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTI+E PPMVVVGVVGY+KTPRGLRS KTVWAQHLSEE+KRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYIKTPRGLRSFKTVWAQHLSEELKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NWC SKKKAF+KYSKK+ETEDGKKDI +QLE L+K+ TVIRVLAHSQIRKM+GLKQKKAH
Sbjct: 121 NWCMSKKKAFTKYSKKYETEDGKKDIQSQLESLRKHSTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDV KKVDYAYSLFEKQ+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVPKKVDYAYSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQDSHSAMT 300

Query: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360
           EFDRTE+DITPIGGFPHYG+VKEDYLMIKGCC GPKKRVVTLRQS IKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGIVKEDYLMIKGCCAGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]

BLAST of Carg25941 vs. NCBI nr
Match: XP_022151895.1 (60S ribosomal protein L3-2 [Momordica charantia])

HSP 1 Score: 751.5 bits (1939), Expect = 1.4e-213
Identity = 364/388 (93.81%), Postives = 380/388 (97.94%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPC LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCSLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPPM+V+G+VGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMIVIGIVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NWCKSKKKAF+KYSKK+ETEDGKKDI AQ EKLKKY T IRVLAHSQIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEDGKKDIQAQFEKLKKYSTEIRVLAHSQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEI+VNGGDV KKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIKVNGGDVPKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YK+GKTGQDS+SAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKIGKTGQDSYSAMT 300

Query: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360
           EFDRTE+DITPIGGFPHYGVVKEDYLM+KGCC GPKKRVVTLRQS IKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDYLMMKGCCAGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKA+FYGR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFYGRLK 388

[Close]

BLAST of Carg25941 vs. TAIR10
Match: AT1G61580.1 (R-protein L3 B)

HSP 1 Score: 713.4 bits (1840), Expect = 7.7e-206
Identity = 342/386 (88.60%), Postives = 374/386 (96.89%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDP+KPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPPMVVVGVVGYVKTPRGLRSL TVWAQHLSEE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NW KSKKKAF++YSKK ETE+GKKDI +QLEK+KKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           L EIQ+NGGD++KKVDYA SLFEKQ+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY+VGK GQ++HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360
           E+DRTE+DITP+GGFPHYG+VKEDYLMIKGCCVGPKKRVVTLRQ+ +KQTSR+AMEEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGR 387
           KFID +S  GHGRFQT+QEKAKFYGR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386

[Close]

BLAST of Carg25941 vs. TAIR10
Match: AT1G43170.1 (ribosomal protein 1)

HSP 1 Score: 686.4 bits (1770), Expect = 1.0e-197
Identity = 322/387 (83.20%), Postives = 367/387 (94.83%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTI+ETP MVVVGVV YVKTPRGLRSL TVWAQHLSEEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NW KSKKKAF+ Y+K++++EDGKK I AQLEK+KKY TVIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG +++KVD+AYS FEKQIP++A+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y++GK G ++H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360
           E+DRTE+D+TP+GGFPHYG+VK+DYLMIKGCCVGPKKRVVTLRQS + QTSR+A+EEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of Carg25941 vs. Swiss-Prot
Match: sp|P22738|RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana OX=3702 GN=ARP2 PE=2 SV=4)

HSP 1 Score: 713.4 bits (1840), Expect = 1.4e-204
Identity = 342/386 (88.60%), Postives = 374/386 (96.89%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDP+KPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPPMVVVGVVGYVKTPRGLRSL TVWAQHLSEE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NW KSKKKAF++YSKK ETE+GKKDI +QLEK+KKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           L EIQ+NGGD++KKVDYA SLFEKQ+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY+VGK GQ++HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360
           E+DRTE+DITP+GGFPHYG+VKEDYLMIKGCCVGPKKRVVTLRQ+ +KQTSR+AMEEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGR 387
           KFID +S  GHGRFQT+QEKAKFYGR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386

[Close]

BLAST of Carg25941 vs. Swiss-Prot
Match: sp|P35684|RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL3 PE=2 SV=2)

HSP 1 Score: 694.5 bits (1791), Expect = 6.7e-199
Identity = 325/388 (83.76%), Postives = 369/388 (95.10%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DD SKPC LT+F+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPP+V+VG+V YVKTPRGLRSL +VWAQHLSEEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NWCKSKKKAF+KY+ K++++ GKK+I  QLEK+KKY +++RV+AH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQ+NGG ++ KVDY Y  FEK+IPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK+GQ+SH+A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 300

Query: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360
           EFDRTE+DITP+GGFPHYGVVK DYLMIKGCCVGPKKRVVTLRQS +KQTSR+A+EEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTT EK +F+G++K
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQRFFGKLK 388

[Close]

BLAST of Carg25941 vs. Swiss-Prot
Match: sp|P17094|RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=1 SV=5)

HSP 1 Score: 686.4 bits (1770), Expect = 1.8e-196
Identity = 322/387 (83.20%), Postives = 367/387 (94.83%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTI+ETP MVVVGVV YVKTPRGLRSL TVWAQHLSEEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NW KSKKKAF+ Y+K++++EDGKK I AQLEK+KKY TVIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGG +++KVD+AYS FEKQIP++A+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y++GK G ++H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360
           E+DRTE+D+TP+GGFPHYG+VK+DYLMIKGCCVGPKKRVVTLRQS + QTSR+A+EEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of Carg25941 vs. Swiss-Prot
Match: sp|P39023|RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens OX=9606 GN=RPL3 PE=1 SV=2)

HSP 1 Score: 548.5 bits (1412), Expect = 5.9e-155
Identity = 268/394 (68.02%), Postives = 330/394 (83.76%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FP+DDPSKP  LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           ++PGSK++KKE  EAVTIVETPPMVVVG+VGYV+TPRGLR+ KTV+A+H+S+E KRRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NW KSKKKAF+KY KK++ EDGKK +      +KKY  VIRV+AH+Q+R +  L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMR-LLPLRQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG V++K+D+A    E+Q+PV+ +F +DEMID+IGVTKGKGY+GV +RW   +
Sbjct: 181 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVG-----KTGQ-D 300
           LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G     K G+  
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 300

Query: 301 SHSAMTEFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVA 360
            ++A T++D +++ I P+GGF HYG V  D++M+KGC VG KKRV+TLR+S + QT R A
Sbjct: 301 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 360

Query: 361 MEEIKLKFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           +E+I LKFIDT+SKFGHGRFQT +EK  F G +K
Sbjct: 361 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393

[Close]

BLAST of Carg25941 vs. Swiss-Prot
Match: sp|P21531|RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 544.7 bits (1402), Expect = 8.6e-154
Identity = 265/394 (67.26%), Postives = 329/394 (83.50%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FP+DDPSKP  LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           ++PGSK++KKE  EAVTIVETPPMVVVG+VGYV+TPRGLR+ KTV+A+H+S+E KRRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NW KSKKKAF+KY KK++ + GKK +      +KKY  VIR++AH+Q+R +  L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMR-LLPLRQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG V++K+D+A    E+Q+PV+ +F +DEMID+IGVTKGKGY+GV +RW   +
Sbjct: 181 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVG-----KTGQ-D 300
           LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G     K G+  
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 300

Query: 301 SHSAMTEFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVA 360
            ++A T++D +++ I P+GGF HYG V  D++M+KGC VG KKRV+TLR+S + QT R A
Sbjct: 301 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 360

Query: 361 MEEIKLKFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           +E+I LKFIDT+SKFGHGRFQT +EK  F G +K
Sbjct: 361 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393

[Close]

BLAST of Carg25941 vs. TrEMBL
Match: tr|A0A1S3BES9|A0A1S3BES9_CUCME (60S ribosomal protein L3-2 OS=Cucumis melo OX=3656 GN=LOC103488840 PE=3 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 3.2e-214
Identity = 366/388 (94.33%), Postives = 379/388 (97.68%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTI+E PPMVVVGVVGY+KTPRGLRS KTVWAQHLSEE+KRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYIKTPRGLRSFKTVWAQHLSEELKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NWC SKKKAF+KYSKK+ETEDGKKDI +QLE L+K+ TVIRVLAHSQIRKM+GLKQKKAH
Sbjct: 121 NWCMSKKKAFTKYSKKYETEDGKKDIQSQLESLRKHSTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDV KKVDYAYSLFEKQ+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVPKKVDYAYSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQDSHSAMT 300

Query: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360
           EFDRTE+DITPIGGFPHYG+VKEDYLMIKGCC GPKKRVVTLRQS IKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGIVKEDYLMIKGCCAGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]

BLAST of Carg25941 vs. TrEMBL
Match: tr|W9QLL9|W9QLL9_9ROSA (60S ribosomal protein L3 OS=Morus notabilis OX=981085 GN=L484_001372 PE=3 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 2.5e-211
Identity = 356/388 (91.75%), Postives = 381/388 (98.20%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDP+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVT++ETPPMVVVGVVGY+KTPRGLR L TVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTVIETPPMVVVGVVGYIKTPRGLRCLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NWCKSKKKAF+KYSKK+ET+DGKKDI AQLEKLKKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKKYETDDGKKDIQAQLEKLKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGD++KKVD+AY+ FEKQIP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDIAKKVDFAYNFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK GQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQESHSAMT 300

Query: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360
           EFDRTE+DITPIGGFPHYGVVKED+LMIKGCCVGPKKRVVTLRQS +KQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDFLMIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKA+FYGR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFYGRLK 388

[Close]

BLAST of Carg25941 vs. TrEMBL
Match: tr|A0A0A0KT85|A0A0A0KT85_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G586000 PE=3 SV=1)

HSP 1 Score: 743.0 bits (1917), Expect = 3.3e-211
Identity = 362/388 (93.30%), Postives = 377/388 (97.16%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDD SKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDSSKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTI+E PPMVVVGVVGY++TPRGLRS KTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYIRTPRGLRSFKTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NWC SKKKAF+KYSKK+ETEDGKKDI +QL+ L+K+ TVIRVLAHSQIRKM+GLKQKKAH
Sbjct: 121 NWCMSKKKAFTKYSKKYETEDGKKDIQSQLDSLRKHSTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDV KKVDYAYSLFEKQ+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVPKKVDYAYSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQDSHSAMT 300

Query: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360
           EFDRTE+DITPIGGFPHYG+VKEDYLMIKG C GPKKRVVTLRQS IKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGIVKEDYLMIKGGCAGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKA+FYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFYGRVK 388

[Close]

BLAST of Carg25941 vs. TrEMBL
Match: tr|A5BAZ0|A5BAZ0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_042376 PE=3 SV=1)

HSP 1 Score: 741.9 bits (1914), Expect = 7.4e-211
Identity = 358/388 (92.27%), Postives = 380/388 (97.94%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFL RKRA+RHRGKVKAFP+DDP+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLXRKRAARHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTI+ETPPMVVVGVVGY+KTPRGLRSL TVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NWCKSKKKAF+KYSKK+E+EDGKKDI AQLEK+KKY  VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDV+KKVDYAY  FEKQIP+DAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKVGKTGQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMT 300

Query: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360
           EFDRTE+DITP+GGFPHYGVVK+DYL+IKGCCVGPKKRVVTLRQS +KQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKAKF+GR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFFGRLK 388

[Close]

BLAST of Carg25941 vs. TrEMBL
Match: tr|A0A251K1M8|A0A251K1M8_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G151400 PE=3 SV=1)

HSP 1 Score: 740.7 bits (1911), Expect = 1.6e-210
Identity = 357/388 (92.01%), Postives = 382/388 (98.45%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDP+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 120
           EKPGSKLHKKETCEAVTIVETPPMVVVGVVGY+KTPRGLRSL TVWAQHLSE+VKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIVETPPMVVVGVVGYMKTPRGLRSLNTVWAQHLSEDVKRRFYK 120

Query: 121 NWCKSKKKAFSKYSKKFETEDGKKDILAQLEKLKKYGTVIRVLAHSQIRKMRGLKQKKAH 180
           NWCKSKKKAF+KYSKKFE+EDGKKDI AQLEKLKK+ +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKFESEDGKKDIQAQLEKLKKHCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGDVSKKVDYAYSLFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGDV+KKVD+AYS FEKQIP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDFAYSFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK+GQ+SH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKSGQESHTAIT 300

Query: 301 EFDRTERDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSRIKQTSRVAMEEIKL 360
           E+DRTE+DITP+GGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQS + QTSRVA+EEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLLNQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 389
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

The following BLAST results are available for this feature:

BLAST of Carg25941 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547361.1	1.4e-221	98.97	60S ribosomal protein L3-2 [Cucurbita pepo subsp. pepo] >XP_023547362.1 60S ribo...	[more]
XP_022957236.1	5.3e-221	98.71	60S ribosomal protein L3-2 [Cucurbita moschata]	[more]
XP_022998082.1	7.7e-220	98.20	60S ribosomal protein L3-2 [Cucurbita maxima]	[more]
XP_008445969.1	4.8e-214	94.33	PREDICTED: 60S ribosomal protein L3-2 [Cucumis melo]	[more]
XP_022151895.1	1.4e-213	93.81	60S ribosomal protein L3-2 [Momordica charantia]	[more]

BLAST of Carg25941 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G61580.1	7.7e-206	88.60	R-protein L3 B	[more]
AT1G43170.1	1.0e-197	83.20	ribosomal protein 1	[more]

BLAST of Carg25941 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P22738\|RL32_ARATH	1.4e-204	88.60	60S ribosomal protein L3-2 OS=Arabidopsis thaliana OX=3702 GN=ARP2 PE=2 SV=4	[more]
sp\|P35684\|RL3_ORYSJ	6.7e-199	83.76	60S ribosomal protein L3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL3 PE=2 S...	[more]
sp\|P17094\|RL31_ARATH	1.8e-196	83.20	60S ribosomal protein L3-1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=1 SV=5	[more]
sp\|P39023\|RL3_HUMAN	5.9e-155	68.02	60S ribosomal protein L3 OS=Homo sapiens OX=9606 GN=RPL3 PE=1 SV=2	[more]
sp\|P21531\|RL3_RAT	8.6e-154	67.26	60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3	[more]

BLAST of Carg25941 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BES9\|A0A1S3BES9_CUCME	3.2e-214	94.33	60S ribosomal protein L3-2 OS=Cucumis melo OX=3656 GN=LOC103488840 PE=3 SV=1	[more]
tr\|W9QLL9\|W9QLL9_9ROSA	2.5e-211	91.75	60S ribosomal protein L3 OS=Morus notabilis OX=981085 GN=L484_001372 PE=3 SV=1	[more]
tr\|A0A0A0KT85\|A0A0A0KT85_CUCSA	3.3e-211	93.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G586000 PE=3 SV=1	[more]
tr\|A5BAZ0\|A5BAZ0_VITVI	7.4e-211	92.27	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_042376 PE=3 SV=1	[more]
tr\|A0A251K1M8\|A0A251K1M8_MANES	1.6e-210	92.01	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G151400 PE=3 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR009000	Transl_B-barrel_sf
IPR019926	Ribosomal_L3_CS
IPR000597	Ribosomal_L3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25941-RA	Carg25941-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.1430.10		coord: 83..206 e-value: 1.7E-201 score: 671.1
None	No IPR available	GENE3D	G3DSA:2.40.30.10		coord: 44..82 e-value: 1.7E-201 score: 671.1 coord: 207..224 e-value: 1.7E-201 score: 671.1 coord: 274..385 e-value: 1.7E-201 score: 671.1
None	No IPR available	GENE3D	G3DSA:4.10.960.10		coord: 225..273 e-value: 1.7E-201 score: 671.1 coord: 1..43 e-value: 1.7E-201 score: 671.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR11363	60S RIBOSOMAL PROTEIN L3-RELATED	coord: 1..388
None	No IPR available	PANTHER	PTHR11363:SF6	60S RIBOSOMAL PROTEIN L3-2	coord: 1..388
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 1..370 e-value: 5.3E-189 score: 627.7
IPR019926	Ribosomal protein L3, conserved site	PROSITE	PS00474	RIBOSOMAL_L3	coord: 212..235
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	SSF50447	Translation proteins	coord: 4..370

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25941	Cla022927	Watermelon (97103) v1	carwmB0342
Carg25941	Csa5G586000	Cucumber (Chinese Long) v2	carcuB0385
Carg25941	MELO3C011819	Melon (DHL92) v3.5.1	carmeB0358
Carg25941	ClCG11G013260	Watermelon (Charleston Gray)	carwcgB0343
Carg25941	CSPI05G20970	Wild cucumber (PI 183967)	carcpiB0388
Carg25941	Cucsa.076150	Cucumber (Gy14) v1	carcgyB0412
Carg25941	CmaCh04G018640	Cucurbita maxima (Rimu)	carcmaB0495
Carg25941	CmoCh04G019620	Cucurbita moschata (Rifu)	carcmoB0478
Carg25941	Lsi04G007190	Bottle gourd (USVL1VR-Ls)	carlsiB320
Carg25941	Cp4.1LG01g16280	Cucurbita pepo (Zucchini)	carcpeB0492
Carg25941	CsGy5G020490	Cucumber (Gy14) v2	carcgybB0363
Carg25941	MELO3C011819.2	Melon (DHL92) v3.6.1	carmedB0363
Carg25941	CsaV3_5G029770	Cucumber (Chinese Long) v3	carcucB0387
Carg25941	Cla97C11G219180	Watermelon (97103) v2	carwmbB0367

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None