CmaCh04G018640 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G018640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ribosomal protein L3 component of cytosolic 80S ribosome and 60S large subunit
Location	Cma_Chr04 : 9487345 .. 9491025 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGCCATTGAATTCACGGTTATATTACTCGATTTACTTCGACTATAGTTTGTTCATTCCATCTCTAACCTCTACTTGCAGGATCTCTTATTTCCCTTTGCAGTATACTTCAATTTGTTTTAAAATTGTTTTGTCTCTTTGGATTTGACGTGAAATGAGCTCTGGTGAATCGATCTGTAACTTTACCATTGTAGTTTATGTTTTTGATTTATTGTTAATACGACGTGAAGAAAGTATGTTATCTGGAGGATATTTTTATTGCAACTAATGCATCTGGAGGATTGAAAATCTAAATTCAGGCCTTGTATTTCTGGAATTTTGTTTTTTTTATCCCCGACCGTTGTTCCATTCATGTTTTCCGGTTAAATTCCAATATTCCTAATGACAGTCGAAATGGCTTCCCCATAAAAAAAAACTATGAATAATCAGGGCTGGAGTCTAGAACAGGCTCTTTCTCCAAAGCCAATTTATTGGTTTTTGGGTTGAAACACGGATGAGCCTGAGTTTTGGCATTATTTAGTGCCATAGGCCACTGGTTGGGGGTCATTTTGATGTCTGCAGGATCATGGAACCTGAAACCAGGAAAACTTGAACCTGGAACCTGTTTTTTCTTCCATCCTTATGCGAATACTGTTATCCGTATTTTTGAGATTTTTGTTTCACTCTAATTTTTTTTTTTTCTCTTTGTGGTTTTTGTTTTTAATTACAAATGATCTGTTTTGGCCTATCGTTATCTATTATTTTGTACCCACTAGTATTATATGTTTTTTATTTGAAATGTTATGCTTAATTACCGTTTGAAAGAAGAACCTGTGTATCGTTTGGTCTTTTTGGGATGCTGTTAATGGATCAATTAAATTTCAAAGTTTCCAATTAATTTCAATAGGAACGCAGTATGTCTCACCGCAAGTTTGAGCACCCAAGACATGGCTCTTTGGGTTTTCTTCCCAGAAAGAGAGCTTCTCGCCATAGAGGGAAAGGTATTGGCACTCATTCTTTGCTAGATCTTATTTTATGACTAATAGTATTATATTATTGTATTTGTATAGATCATTCATATTGTTTTTTATTCCGCTTGTAACAAGTCAGTTGTCAGTCTTTTAATATGCACCGGTTTGATCGTTCCAAGTGCTTCATTCAGTTTTTCCTTTTATATTGTAGTCAGCTGAGTATTTTCTTCTGTAATTAGTGCTTCTCACTCTGATCAGTTGTTGCTCAGGCATATTCCTGGATGCTTTTTTCATTTATTGAATCCTTGCATAACCTTTCCATACTTCGATTTCAATTGCATGTTTACCTTTTTTTTTATATAAATTTCATGTTATGATATAGTGGAAAGCATTACAACACGCATTGTGTTTACTAAATTCCTTACAAATTTTCTTTCTTGTGTAAGAAAATTTATTTGATATTCTTTAGCTCAATGTTTTTATCTGGTGGTGACTTTTACTTCGCAGTGAAGGCATTTCCCAGAGATGATCCATCGAAGCCTTGTAGATTAACTGCTTTCCTTGGATATAAGGCTGGAATGACTCATATTGTCAGAGAAGTTGAAAAGCCTGGATCAAGTGAGTCTGGTTGAAAGTTATTTATATCTATATAAAGAAAATGATATAGATGCATATAGCAATATATCCAACAGTTGCCTAGTTATGTCTGTTTCTCTACGGCACCATTGCTTCTTGTTTTGCCCTTTTTAGCAATTTTGCGTAGCATTTATTGTGTTGGTTAATCTTGTGTTTGGCCTTCTATTTAGATTATAAATTTCCCAATTGCAATGTGATGTGGAAACTTGTTGGATTATTGATTTGTCTTATGATCCTCTTAGAGTTACACAAGAAAGAAACATGTGAAGCTGTAACAATTATAGAAACGCCCCCTATGGTTGTTGTTGGTGTTGTTGGCTATGTCAAAACGCCACGAGGTTTGCGTTCATTGAAAACTGTATGGGCCCAGCATTTGAGCGAGGAGGTCAAGAGGAGATTTTACAAGAACTGGTGTAAGTCTAAGAAGAAAGCTTTCTCTAAGTACTCAAAGAAGTTTGAGACTGAAGATGGAAAAAAGGATATTCTGGCACAGTTCGAGAAATTGAAGAAATACAGCACTGTGATTCGTGTTCTGGCCCACTCCCAGGTACTTAGTGCTTCCCAAATATTACATGATGAACGACTTGAATACTATACTTTTCTCCCCTTCCGTTTAATGTTGATCAACCTGAAAATTTTAACCGTTGCAAAATATTGTTAATATTTGATGTGTAGTTCTATGTTTAAGTACCCACTTTAAGAAGATCGACTTTGTTTCAGATAAGGAAGATGCAAGGACTAAAGCAAAAGAAAGCTCACTTGATGGAAATTCAGGTGAATGGTGGAGATGTTTCTAAGAAGGTTGATTATGCATATAGTTTATTTGAGAAGCAGATCCCTGTTGATGCAATCTTCCAAAAGGATGAGATGATTGATATTATTGGTGTAACTAAAGGAAAGGGTTATGAAGGTGTGGTTACCCGTTGGGGTGTCACTCGTCTCCCCCGCAAGACCCATCGTGGCCTTCGCAAGGTAGCCTGTATTGGTGCTTGGCATCCAGCCAGAGTGTCATTCACTGTTGCTCGAGCAGGGCAGAATGGTTACCATCATCGCACAGAGATGAATAAGAAGGTTTATAAGGTTGGGAAGACCGGCCAAGACTCCCATTCTGCTATGACTGAGTTCGATAGGTTAGTCAACCTTTGCCTTCCCCTTTTTGGCTATTACTTATCTTTTCTTGAATTACTGCTACTGATGTTTGTGGATATTTATTCTTTTTAGGACTGAGAAGGACATAACTCCAATTGGTGGATTCCCTCACTATGGTGTGGTCAAAGAGGATTACTTGATGATCAAGGGCTGTTGTGTGGGTCCAAAAAAGCGTGTTGTCACATTGAGGCATTCACTGATTAAGCAGACGTCAAGGGTTGCTATGGAGGAAATCAAACTGAAATTCATTGACACTTCCTCCAAGTTTGGCCATGGACGGTTTCAGACAACACAGGAGAAGGCTAAGTTTTATGGACGAGTCAAGTAGGTGTTGCGTGCGACTGATTTTTTTTATTCTCGATGATTTGGGTTTCTTCATTTTAAACATGTAACGTTTTCAGACTTGGGAAAGGTGTTGTTTAATGTTATGATGACTATTCATCCTTGGTGTTCAATCTGTTCTTCAATCCTCCACCTAGTTGTCTGGTGGTGTTGTGACTCCGTACTCATCTGCTTGTTTTGGATCCTGCACCCTTTTTCTTGACCCAGTTGATTCAACATTTTTGTATCCACCCAGTGGGGATCAAATAGACAGCGGCACCAATTTGAACACGTTTCTGTGCTGTTTCTAAATTCAAACAGGGTTTCAATATGAACATAAATGAGAACATGGAATATCTGGCGTCCATTCCAATTTCCATTCTTCTTTTCATTGATGAGTTCCCCACGTTTTGTAATGTTCTGAATATGACCATTCGATTAGACCCTCTCACCTTTTCTAATTCACGGGGCCCTATACTACACTCCACTCCCTACTATAATTGAATCTGAATCCCAAACCCAACACAATTCATTCCTACGAACCCACTCCCTGTATTGTGTTTAGATATGTTTATGGGTACGAACCCACTTCCTGTATTGTGTTTAGATATGTTTATGGGTA

mRNA sequence

ATGGTCGCCATTGAATTCACGGAACGCAGTATGTCTCACCGCAAGTTTGAGCACCCAAGACATGGCTCTTTGGGTTTTCTTCCCAGAAAGAGAGCTTCTCGCCATAGAGGGAAAGTGAAGGCATTTCCCAGAGATGATCCATCGAAGCCTTGTAGATTAACTGCTTTCCTTGGATATAAGGCTGGAATGACTCATATTGTCAGAGAAGTTGAAAAGCCTGGATCAAAGTTACACAAGAAAGAAACATGTGAAGCTGTAACAATTATAGAAACGCCCCCTATGGTTGTTGTTGGTGTTGTTGGCTATGTCAAAACGCCACGAGGTTTGCGTTCATTGAAAACTGTATGGGCCCAGCATTTGAGCGAGGAGGTCAAGAGGAGATTTTACAAGAACTGGTGTAAGTCTAAGAAGAAAGCTTTCTCTAAGTACTCAAAGAAGTTTGAGACTGAAGATGGAAAAAAGGATATTCTGGCACAGTTCGAGAAATTGAAGAAATACAGCACTGTGATTCGTGTTCTGGCCCACTCCCAGATAAGGAAGATGCAAGGACTAAAGCAAAAGAAAGCTCACTTGATGGAAATTCAGATCCCTGTTGATGCAATCTTCCAAAAGGATGAGATGATTGATATTATTGGTGTAACTAAAGGAAAGGGTTATGAAGGTGTGGTTACCCGTTGGGGTGTCACTCGTCTCCCCCGCAAGACCCATCGTGGCCTTCGCAAGGTAGCCTGTATTGGTGCTTGGCATCCAGCCAGAGTGTCATTCACTGTTGCTCGAGCAGGGCAGAATGGTTACCATCATCGCACAGAGATGAATAAGAAGGTTTATAAGGTTGGGAAGACCGGCCAAGACTCCCATTCTGCTATGACTGAGTTCGATAGGACTGAGAAGGACATAACTCCAATTGGTGGATTCCCTCACTATGGTGTGGTCAAAGAGGATTACTTGATGATCAAGGGCTGTTGTGTGGGTCCAAAAAAGCGTGTTGTCACATTGAGGCATTCACTGATTAAGCAGACGTCAAGGGTTGCTATGGAGGAAATCAAACTGAAATTCATTGACACTTCCTCCAAGTTTGGCCATGGACGGTTTCAGACAACACAGGAGAAGGCTAAGTTTTATGGACGAGTCAAGTAGGTGTTGCGTGCGACTGATTTTTTTTATTCTCGATGATTTGGGTTTCTTCATTTTAAACATGTAACGTTTTCAGACTTGGGAAAGGTGTTGTTTAATGTTATGATGACTATTCATCCTTGGTGTTCAATCTGTTCTTCAATCCTCCACCTAGTTGTCTGGTGGTGTTGTGACTCCGTACTCATCTGCTTGTTTTGGATCCTGCACCCTTTTTCTTGACCCAGTTGATTCAACATTTTTGTATCCACCCAGTGGGGATCAAATAGACAGCGGCACCAATTTGAACACGTTTCTGTGCTGTTTCTAAATTCAAACAGGGTTTCAATATGAACATAAATGAGAACATGGAATATCTGGCGTCCATTCCAATTTCCATTCTTCTTTTCATTGATGAGTTCCCCACGTTTTGTAATGTTCTGAATATGACCATTCGATTAGACCCTCTCACCTTTTCTAATTCACGGGGCCCTATACTACACTCCACTCCCTACTATAATTGAATCTGAATCCCAAACCCAACACAATTCATTCCTACGAACCCACTCCCTGTATTGTGTTTAGATATGTTTATGGGTACGAACCCACTTCCTGTATTGTGTTTAGATATGTTTATGGGTA

Coding sequence (CDS)

ATGGTCGCCATTGAATTCACGGAACGCAGTATGTCTCACCGCAAGTTTGAGCACCCAAGACATGGCTCTTTGGGTTTTCTTCCCAGAAAGAGAGCTTCTCGCCATAGAGGGAAAGTGAAGGCATTTCCCAGAGATGATCCATCGAAGCCTTGTAGATTAACTGCTTTCCTTGGATATAAGGCTGGAATGACTCATATTGTCAGAGAAGTTGAAAAGCCTGGATCAAAGTTACACAAGAAAGAAACATGTGAAGCTGTAACAATTATAGAAACGCCCCCTATGGTTGTTGTTGGTGTTGTTGGCTATGTCAAAACGCCACGAGGTTTGCGTTCATTGAAAACTGTATGGGCCCAGCATTTGAGCGAGGAGGTCAAGAGGAGATTTTACAAGAACTGGTGTAAGTCTAAGAAGAAAGCTTTCTCTAAGTACTCAAAGAAGTTTGAGACTGAAGATGGAAAAAAGGATATTCTGGCACAGTTCGAGAAATTGAAGAAATACAGCACTGTGATTCGTGTTCTGGCCCACTCCCAGATAAGGAAGATGCAAGGACTAAAGCAAAAGAAAGCTCACTTGATGGAAATTCAGATCCCTGTTGATGCAATCTTCCAAAAGGATGAGATGATTGATATTATTGGTGTAACTAAAGGAAAGGGTTATGAAGGTGTGGTTACCCGTTGGGGTGTCACTCGTCTCCCCCGCAAGACCCATCGTGGCCTTCGCAAGGTAGCCTGTATTGGTGCTTGGCATCCAGCCAGAGTGTCATTCACTGTTGCTCGAGCAGGGCAGAATGGTTACCATCATCGCACAGAGATGAATAAGAAGGTTTATAAGGTTGGGAAGACCGGCCAAGACTCCCATTCTGCTATGACTGAGTTCGATAGGACTGAGAAGGACATAACTCCAATTGGTGGATTCCCTCACTATGGTGTGGTCAAAGAGGATTACTTGATGATCAAGGGCTGTTGTGTGGGTCCAAAAAAGCGTGTTGTCACATTGAGGCATTCACTGATTAAGCAGACGTCAAGGGTTGCTATGGAGGAAATCAAACTGAAATTCATTGACACTTCCTCCAAGTTTGGCCATGGACGGTTTCAGACAACACAGGAGAAGGCTAAGTTTTATGGACGAGTCAAGTAG

Protein sequence

MVAIEFTERSMSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYKNWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAHLMEIQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMTEFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKLKFIDTSSKFGHGRFQTTQEKAKFYGRVK

Homology

[Close]

BLAST of CmaCh04G018640 vs. Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4)

HSP 1 Score: 667.9 bits (1722), Expect = 6.4e-191
Identity = 328/386 (84.97%), Postives = 354/386 (91.71%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDP+KPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSL TVWAQHLSEE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NW KSKKKAF++YSKK ETE+GKKDI +Q EK+KKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 191 LMEIQI--------------------PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           L EIQI                    PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 310
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY+VGK GQ++HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 311 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 370
           E+DRTEKDITP+GGFPHYG+VKEDYLMIKGCCVGPKKRVVTLR +L+KQTSR+AMEEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360

Query: 371 KFIDTSSKFGHGRFQTTQEKAKFYGR 377
           KFID +S  GHGRFQT+QEKAKFYGR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386

[Close]

BLAST of CmaCh04G018640 vs. Swiss-Prot
Match: RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2)

HSP 1 Score: 656.0 bits (1691), Expect = 2.5e-187
Identity = 315/388 (81.19%), Postives = 354/388 (91.24%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DD SKPC LT+F+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           EKPGSKLHKKETCEAVTIIETPP+V+VG+V YVKTPRGLRSL +VWAQHLSEEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NWCKSKKKAF+KY+ K++++ GKK+I  Q EK+KKY++++RV+AH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180

Query: 191 LMEIQ--------------------IPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           LMEIQ                    IPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 310
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK+GQ+SH+A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 300

Query: 311 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 370
           EFDRTEKDITP+GGFPHYGVVK DYLMIKGCCVGPKKRVVTLR SL+KQTSR+A+EEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360

Query: 371 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 379
           KFIDTSSKFGHGRFQTT EK +F+G++K
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQRFFGKLK 388

[Close]

BLAST of CmaCh04G018640 vs. Swiss-Prot
Match: RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5)

HSP 1 Score: 644.0 bits (1660), Expect = 9.9e-184
Identity = 310/387 (80.10%), Postives = 349/387 (90.18%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           EKPGSKLHKKETCEAVTIIETP MVVVGVV YVKTPRGLRSL TVWAQHLSEEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NW KSKKKAF+ Y+K++++EDGKK I AQ EK+KKY+TVIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 191 LMEI--------------------QIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           +MEI                    QIP++A+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 310
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y++GK G ++H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 311 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 370
           E+DRTEKD+TP+GGFPHYG+VK+DYLMIKGCCVGPKKRVVTLR SL+ QTSR+A+EEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 371 KFIDTSSKFGHGRFQTTQEKAKFYGRV 378
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of CmaCh04G018640 vs. Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2)

HSP 1 Score: 521.5 bits (1342), Expect = 7.4e-147
Identity = 260/394 (65.99%), Postives = 316/394 (80.20%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FP+DDPSKP  LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           ++PGSK++KKE  EAVTI+ETPPMVVVG+VGYV+TPRGLR+ KTV+A+H+S+E KRRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NW KSKKKAF+KY KK++ EDGKK +   F  +KKY  VIRV+AH+Q+R +  L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 180

Query: 191 LMEI--------------------QIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           LMEI                    Q+PV+ +F +DEMID+IGVTKGKGY+GV +RW   +
Sbjct: 181 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVG-----KTGQ-D 310
           LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G     K G+  
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 300

Query: 311 SHSAMTEFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVA 370
            ++A T++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR SL+ QT R A
Sbjct: 301 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 360

Query: 371 MEEIKLKFIDTSSKFGHGRFQTTQEKAKFYGRVK 379
           +E+I LKFIDT+SKFGHGRFQT +EK  F G +K
Sbjct: 361 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393

[Close]

BLAST of CmaCh04G018640 vs. Swiss-Prot
Match: RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 517.7 bits (1332), Expect = 1.1e-145
Identity = 257/394 (65.23%), Postives = 315/394 (79.95%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKF  PRHGSLGFLPRKR+SRHRGKVK+FP+DDPSKP  LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           ++PGSK++KKE  EAVTI+ETPPMVVVG+VGYV+TPRGLR+ KTV+A+H+S+E KRRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NW KSKKKAF+KY KK++ + GKK +   F  +KKY  VIR++AH+Q+R +  L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 180

Query: 191 LMEI--------------------QIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           LMEI                    Q+PV+ +F +DEMID+IGVTKGKGY+GV +RW   +
Sbjct: 181 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVG-----KTGQ-D 310
           LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G     K G+  
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 300

Query: 311 SHSAMTEFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVA 370
            ++A T++D ++K I P+GGF HYG V  D++M+KGC VG KKRV+TLR SL+ QT R A
Sbjct: 301 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 360

Query: 371 MEEIKLKFIDTSSKFGHGRFQTTQEKAKFYGRVK 379
           +E+I LKFIDT+SKFGHGRFQT +EK  F G +K
Sbjct: 361 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393

[Close]

BLAST of CmaCh04G018640 vs. TrEMBL
Match: W9QLL9_9ROSA (60S ribosomal protein L3 OS=Morus notabilis GN=L484_001372 PE=3 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 4.9e-198
Identity = 342/388 (88.14%), Postives = 361/388 (93.04%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDP+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           EKPGSKLHKKETCEAVT+IETPPMVVVGVVGY+KTPRGLR L TVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTVIETPPMVVVGVVGYIKTPRGLRCLNTVWAQHLSEEVKRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NWCKSKKKAF+KYSKK+ET+DGKKDI AQ EKLKKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKKYETDDGKKDIQAQLEKLKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 191 LMEI--------------------QIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           LMEI                    QIP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDIAKKVDFAYNFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 310
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK GQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQESHSAMT 300

Query: 311 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 370
           EFDRTEKDITPIGGFPHYGVVKED+LMIKGCCVGPKKRVVTLR SL+KQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDFLMIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 371 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 379
           KFIDTSSKFGHGRFQTTQEKA+FYGR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFYGRLK 388

[Close]

BLAST of CmaCh04G018640 vs. TrEMBL
Match: A0A0A0KT85_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G586000 PE=3 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 1.4e-197
Identity = 346/388 (89.18%), Postives = 358/388 (92.27%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDD SKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDSSKPCRLTAFLGYKAGMTHIVREV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           EKPGSKLHKKETCEAVTIIE PPMVVVGVVGY++TPRGLRS KTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYIRTPRGLRSFKTVWAQHLSEEVKRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NWC SKKKAF+KYSKK+ETEDGKKDI +Q + L+K+STVIRVLAHSQIRKMQGLKQKKAH
Sbjct: 121 NWCMSKKKAFTKYSKKYETEDGKKDIQSQLDSLRKHSTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 191 LMEI--------------------QIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           LMEI                    Q+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVPKKVDYAYSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 310
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQDSHSAMT 300

Query: 311 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 370
           EFDRTEKDITPIGGFPHYG+VKEDYLMIKG C GPKKRVVTLR SLIKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGIVKEDYLMIKGGCAGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 371 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 379
           KFIDTSSKFGHGRFQTTQEKA+FYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFYGRVK 388

[Close]

BLAST of CmaCh04G018640 vs. TrEMBL
Match: A5BAZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042376 PE=3 SV=1)

HSP 1 Score: 695.3 bits (1793), Expect = 4.2e-197
Identity = 342/388 (88.14%), Postives = 361/388 (93.04%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKFEHPRHGSLGFL RKRA+RHRGKVKAFP+DDP+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLXRKRAARHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGY+KTPRGLRSL TVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NWCKSKKKAF+KYSKK+E+EDGKKDI AQ EK+KKY  VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180

Query: 191 LMEI--------------------QIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           LMEI                    QIP+DAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 310
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKVGKTGQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMT 300

Query: 311 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 370
           EFDRTEKDITP+GGFPHYGVVK+DYL+IKGCCVGPKKRVVTLR SL+KQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 371 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 379
           KFIDTSSKFGHGRFQTTQEKAKF+GR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFFGRLK 388

[Close]

BLAST of CmaCh04G018640 vs. TrEMBL
Match: A0A059ATX9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02767 PE=3 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 2.7e-196
Identity = 341/388 (87.89%), Postives = 361/388 (93.04%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DD +KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           EKPGSKLHKKETCEAVT+IETPPMVVVG+VGYVKTPRGLRSL TVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTMIETPPMVVVGLVGYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NWCKSKKKAF+KY+KK+E+EDGKKDI +Q EKLKKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYTKKYESEDGKKDIQSQLEKLKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 191 LMEI--------------------QIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           LMEI                    QIPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVAQKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 310
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKVGK GQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKLYKVGKAGQESHSAMT 300

Query: 311 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 370
           EFDRTEKDITP+GGFPHYGVVKEDYLMIKGCCVGPKKRVVTLR SL+KQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 371 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 379
           KFIDTSSKFGHGRFQTTQEKA+F+GR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFFGRLK 388

[Close]

BLAST of CmaCh04G018640 vs. TrEMBL
Match: A0A061E443_THECC (R-protein L3 B isoform 1 OS=Theobroma cacao GN=TCM_006163 PE=3 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 1.0e-195
Identity = 339/388 (87.37%), Postives = 360/388 (92.78%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDP+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLR+L TVWAQHL+EEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRTLGTVWAQHLNEEVKRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           +WCKSKKKAF+KYSKKFETEDGKKDI  Q EKLKKY TVIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 HWCKSKKKAFTKYSKKFETEDGKKDIQLQLEKLKKYCTVIRVLAHTQIRKMKGLKQKKAH 180

Query: 191 LMEI--------------------QIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           LMEI                    QIP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGNIAQKVDFAYSFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 310
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GK GQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKAGQESHSAMT 300

Query: 311 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 370
           ++DRTEKDITP+GGFPHYGVVKEDY++IKGCCVGPKKRVVTLR SL+ QTSRVA+EEIKL
Sbjct: 301 DYDRTEKDITPMGGFPHYGVVKEDYVLIKGCCVGPKKRVVTLRQSLLHQTSRVALEEIKL 360

Query: 371 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 379
           KFIDTSSKFGHGRFQTTQEKAKFYG++K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGKLK 388

[Close]

BLAST of CmaCh04G018640 vs. TAIR10
Match: AT1G61580.1 (AT1G61580.1 R-protein L3 B)

HSP 1 Score: 667.9 bits (1722), Expect = 3.6e-192
Identity = 328/386 (84.97%), Postives = 354/386 (91.71%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDP+KPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSL TVWAQHLSEE++RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NW KSKKKAF++YSKK ETE+GKKDI +Q EK+KKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 191 LMEIQI--------------------PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           L EIQI                    PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 310
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY+VGK GQ++HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 311 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 370
           E+DRTEKDITP+GGFPHYG+VKEDYLMIKGCCVGPKKRVVTLR +L+KQTSR+AMEEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360

Query: 371 KFIDTSSKFGHGRFQTTQEKAKFYGR 377
           KFID +S  GHGRFQT+QEKAKFYGR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386

[Close]

BLAST of CmaCh04G018640 vs. TAIR10
Match: AT1G43170.1 (AT1G43170.1 ribosomal protein 1)

HSP 1 Score: 644.0 bits (1660), Expect = 5.6e-185
Identity = 310/387 (80.10%), Postives = 349/387 (90.18%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           EKPGSKLHKKETCEAVTIIETP MVVVGVV YVKTPRGLRSL TVWAQHLSEEV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NW KSKKKAF+ Y+K++++EDGKK I AQ EK+KKY+TVIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 191 LMEI--------------------QIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           +MEI                    QIP++A+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 310
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y++GK G ++H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 311 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 370
           E+DRTEKD+TP+GGFPHYG+VK+DYLMIKGCCVGPKKRVVTLR SL+ QTSR+A+EEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 371 KFIDTSSKFGHGRFQTTQEKAKFYGRV 378
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of CmaCh04G018640 vs. NCBI nr
Match: gi|659090351|ref|XP_008445969.1| (PREDICTED: 60S ribosomal protein L3-2 [Cucumis melo])

HSP 1 Score: 706.8 bits (1823), Expect = 2.0e-200
Identity = 350/388 (90.21%), Postives = 360/388 (92.78%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           EKPGSKLHKKETCEAVTIIE PPMVVVGVVGY+KTPRGLRS KTVWAQHLSEE+KRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYIKTPRGLRSFKTVWAQHLSEELKRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NWC SKKKAF+KYSKK+ETEDGKKDI +Q E L+K+STVIRVLAHSQIRKMQGLKQKKAH
Sbjct: 121 NWCMSKKKAFTKYSKKYETEDGKKDIQSQLESLRKHSTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 191 LMEI--------------------QIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           LMEI                    Q+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVPKKVDYAYSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 310
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQDSHSAMT 300

Query: 311 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 370
           EFDRTEKDITPIGGFPHYG+VKEDYLMIKGCC GPKKRVVTLR SLIKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGIVKEDYLMIKGCCAGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 371 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 379
           KFIDTSSKFGHGRFQTTQEKAKFYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 388

[Close]

BLAST of CmaCh04G018640 vs. NCBI nr
Match: gi|703067255|ref|XP_010087922.1| (60S ribosomal protein L3 [Morus notabilis])

HSP 1 Score: 698.4 bits (1801), Expect = 7.1e-198
Identity = 342/388 (88.14%), Postives = 361/388 (93.04%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDP+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           EKPGSKLHKKETCEAVT+IETPPMVVVGVVGY+KTPRGLR L TVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTVIETPPMVVVGVVGYIKTPRGLRCLNTVWAQHLSEEVKRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NWCKSKKKAF+KYSKK+ET+DGKKDI AQ EKLKKY +VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKKYETDDGKKDIQAQLEKLKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 191 LMEI--------------------QIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           LMEI                    QIP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDIAKKVDFAYNFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 310
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK GQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQESHSAMT 300

Query: 311 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 370
           EFDRTEKDITPIGGFPHYGVVKED+LMIKGCCVGPKKRVVTLR SL+KQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDFLMIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 371 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 379
           KFIDTSSKFGHGRFQTTQEKA+FYGR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFYGRLK 388

[Close]

BLAST of CmaCh04G018640 vs. NCBI nr
Match: gi|449435140|ref|XP_004135353.1| (PREDICTED: 60S ribosomal protein L3-2 [Cucumis sativus])

HSP 1 Score: 696.8 bits (1797), Expect = 2.1e-197
Identity = 346/388 (89.18%), Postives = 358/388 (92.27%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDD SKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDSSKPCRLTAFLGYKAGMTHIVREV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           EKPGSKLHKKETCEAVTIIE PPMVVVGVVGY++TPRGLRS KTVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYIRTPRGLRSFKTVWAQHLSEEVKRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NWC SKKKAF+KYSKK+ETEDGKKDI +Q + L+K+STVIRVLAHSQIRKMQGLKQKKAH
Sbjct: 121 NWCMSKKKAFTKYSKKYETEDGKKDIQSQLDSLRKHSTVIRVLAHSQIRKMQGLKQKKAH 180

Query: 191 LMEI--------------------QIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           LMEI                    Q+PVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVPKKVDYAYSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 310
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GKTGQDSHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQDSHSAMT 300

Query: 311 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 370
           EFDRTEKDITPIGGFPHYG+VKEDYLMIKG C GPKKRVVTLR SLIKQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGIVKEDYLMIKGGCAGPKKRVVTLRQSLIKQTSRVAMEEIKL 360

Query: 371 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 379
           KFIDTSSKFGHGRFQTTQEKA+FYGRVK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFYGRVK 388

[Close]

BLAST of CmaCh04G018640 vs. NCBI nr
Match: gi|359486157|ref|XP_002263053.2| (PREDICTED: 60S ribosomal protein L3-2 isoform X1 [Vitis vinifera])

HSP 1 Score: 696.4 bits (1796), Expect = 2.7e-197
Identity = 342/388 (88.14%), Postives = 361/388 (93.04%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DDP+ PCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTNPCRLTAFLGYKAGMTHIVREV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGY+KTPRGLRSL TVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NWCKSKKKAF+KYSKK+E+EDGKKDI AQ EK+KKY  VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180

Query: 191 LMEI--------------------QIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           LMEI                    QIP+DAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 310
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKVGKTGQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMT 300

Query: 311 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 370
           EFDRTEKDITP+GGFPHYGVVK+DYL+IKGCCVGPKKRVVTLR SL+KQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 371 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 379
           KFIDTSSKFGHGRFQTTQEKAKF+GR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFFGRLK 388

[Close]

BLAST of CmaCh04G018640 vs. NCBI nr
Match: gi|147865994|emb|CAN83050.1| (hypothetical protein VITISV_042376 [Vitis vinifera])

HSP 1 Score: 695.3 bits (1793), Expect = 6.0e-197
Identity = 342/388 (88.14%), Postives = 361/388 (93.04%), Query Frame = 1


Query: 11  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPSKPCRLTAFLGYKAGMTHIVREV 70
           MSHRKFEHPRHGSLGFL RKRA+RHRGKVKAFP+DDP+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLXRKRAARHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 71  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLKTVWAQHLSEEVKRRFYK 130
           EKPGSKLHKKETCEAVTIIETPPMVVVGVVGY+KTPRGLRSL TVWAQHLSEEVKRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 131 NWCKSKKKAFSKYSKKFETEDGKKDILAQFEKLKKYSTVIRVLAHSQIRKMQGLKQKKAH 190
           NWCKSKKKAF+KYSKK+E+EDGKKDI AQ EK+KKY  VIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180

Query: 191 LMEI--------------------QIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 250
           LMEI                    QIP+DAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 251 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKTGQDSHSAMT 310
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKVGKTGQ+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMT 300

Query: 311 EFDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRHSLIKQTSRVAMEEIKL 370
           EFDRTEKDITP+GGFPHYGVVK+DYL+IKGCCVGPKKRVVTLR SL+KQTSRVAMEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360

Query: 371 KFIDTSSKFGHGRFQTTQEKAKFYGRVK 379
           KFIDTSSKFGHGRFQTTQEKAKF+GR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFFGRLK 388

The following BLAST results are available for this feature:

BLAST of CmaCh04G018640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL32_ARATH	6.4e-191	84.97	60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4	[more]
RL3_ORYSJ	2.5e-187	81.19	60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2	[more]
RL31_ARATH	9.9e-184	80.10	60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5	[more]
RL3_HUMAN	7.4e-147	65.99	60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2	[more]
RL3_RAT	1.1e-145	65.23	60S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3	[more]

BLAST of CmaCh04G018640 vs. TrEMBL


Match Name	E-value	Identity	Description
W9QLL9_9ROSA	4.9e-198	88.14	60S ribosomal protein L3 OS=Morus notabilis GN=L484_001372 PE=3 SV=1	[more]
A0A0A0KT85_CUCSA	1.4e-197	89.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G586000 PE=3 SV=1	[more]
A5BAZ0_VITVI	4.2e-197	88.14	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042376 PE=3 SV=1	[more]
A0A059ATX9_EUCGR	2.7e-196	87.89	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02767 PE=3 SV=1	[more]
A0A061E443_THECC	1.0e-195	87.37	R-protein L3 B isoform 1 OS=Theobroma cacao GN=TCM_006163 PE=3 SV=1	[more]

BLAST of CmaCh04G018640 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G61580.1	3.6e-192	84.97	R-protein L3 B	[more]
AT1G43170.1	5.6e-185	80.10	ribosomal protein 1	[more]

BLAST of CmaCh04G018640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090351\|ref\|XP_008445969.1\|	2.0e-200	90.21	PREDICTED: 60S ribosomal protein L3-2 [Cucumis melo]	[more]
gi\|703067255\|ref\|XP_010087922.1\|	7.1e-198	88.14	60S ribosomal protein L3 [Morus notabilis]	[more]
gi\|449435140\|ref\|XP_004135353.1\|	2.1e-197	89.18	PREDICTED: 60S ribosomal protein L3-2 [Cucumis sativus]	[more]
gi\|359486157\|ref\|XP_002263053.2\|	2.7e-197	88.14	PREDICTED: 60S ribosomal protein L3-2 isoform X1 [Vitis vinifera]	[more]
gi\|147865994\|emb\|CAN83050.1\|	6.0e-197	88.14	hypothetical protein VITISV_042376 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000597	Ribosomal_L3
IPR009000	Transl_B-barrel_sf
IPR019926	Ribosomal_L3_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0016020	membrane
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G018640.1	CmaCh04G018640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 11..196 score: 2.4
IPR009000	Translation protein, beta-barrel domain	unknown	SSF50447	Translation proteins	coord: 14..360 score: 1.5E
IPR019926	Ribosomal protein L3, conserved site	PROSITE	PS00474	RIBOSOMAL_L3	coord: 202..225 scor
None	No IPR available	GENE3D	G3DSA:2.40.30.10		coord: 54..102 score: 7.8E-19coord: 223..360 score: 2.0
None	No IPR available	GENE3D	G3DSA:3.30.1430.10		coord: 103..196 score: 1.2
None	No IPR available	PANTHER	PTHR11363	60S RIBOSOMAL PROTEIN L3-RELATED	coord: 11..378 score:
None	No IPR available	PANTHER	PTHR11363:SF6	60S RIBOSOMAL PROTEIN L3-2	coord: 11..378 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G018640	Cucsa.076150	Cucumber (Gy14) v1	cgycmaB0126
CmaCh04G018640	Cla022927	Watermelon (97103) v1	cmawmB738
CmaCh04G018640	Csa5G586000	Cucumber (Chinese Long) v2	cmacuB749
CmaCh04G018640	MELO3C011819	Melon (DHL92) v3.5.1	cmameB641
CmaCh04G018640	ClCG11G013260	Watermelon (Charleston Gray)	cmawcgB629
CmaCh04G018640	CSPI05G20970	Wild cucumber (PI 183967)	cmacpiB758
CmaCh04G018640	CmoCh04G019620	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G018640	Lsi04G007190	Bottle gourd (USVL1VR-Ls)	cmalsiB670
CmaCh04G018640	Cp4.1LG01g16280	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G018640	MELO3C011819.2	Melon (DHL92) v3.6.1	cmamedB727
CmaCh04G018640	CsaV3_5G029770	Cucumber (Chinese Long) v3	cmacucB0886
CmaCh04G018640	Cla97C11G219180	Watermelon (97103) v2	cmawmbB735
CmaCh04G018640	CsGy5G020490	Cucumber (Gy14) v2	cgybcmaB675
CmaCh04G018640	Carg25941	Silver-seed gourd	carcmaB0495

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G018640	Cucurbita pepo (Zucchini)	cmacpeB694
CmaCh04G018640	Melon (DHL92) v3.6.1	cmamedB730
CmaCh04G018640	Silver-seed gourd	carcmaB0971
CmaCh04G018640	Cucumber (Chinese Long) v3	cmacucB0898
CmaCh04G018640	Watermelon (97103) v2	cmawmbB726
CmaCh04G018640	Cucurbita maxima (Rimu)	cmacmaB404
CmaCh04G018640	Cucumber (Gy14) v1	cgycmaB0545
CmaCh04G018640	Cucurbita moschata (Rifu)	cmacmoB707
CmaCh04G018640	Wild cucumber (PI 183967)	cmacpiB766
CmaCh04G018640	Cucumber (Chinese Long) v2	cmacuB759
CmaCh04G018640	Melon (DHL92) v3.5.1	cmameB646