Cp4.1LG01g16250 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g16250
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionNonsense-mediated mRNA decay protein 2 isoform 2
LocationCp4.1LG01 : 9942151 .. 9945830 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGGTTGGGGTGGAACTCTATACGGATTAACTCAAAATACTCCCCAACCGTGCGACCATTTTATAGAGTATTATATTATTGATATGTCGACAATAGTGTATGAATACTATATTAGTAACATATTAGCAGTATTATGTACGAGTAGTTTTGTTTTCGGCTAGTTTGAACTTTTTATCTTTATTGTTTGGGTTGAGATTAGGGTTAGATTTGCAAATCGGTGTCGGGATAATTTTCAGATTCGAGTCTGGCGACTCCGATTGCCGGTTGCATTTGAAGAACCCTCTAGGGTTTACGTTCAGGTTCGCATTCTTTACACAATCTCGATTTGGTAGCTTCTCAAGTCTTGTGAATTTCACTTTTCTTTGGTTCTATTATCAATTCTTAAGAAATTGCACCTAAAGGCCGATTTTCTTGGCTGCATTTCAACTTCATCTGTTGTTCGTTCATGGTTCCAATTTTCTGGGAGATTGAGTGATATTATTTTTAAAGCGTGTTCTTGAATTCAGTTAGTGTCGGGTGTTTGTGGTCTTTATTGTGCTTGGTCTGTTCGGTATAAGAAGTTATCTCGAATCTTTATAGTCATTGCATAGATTTATGTCCAAATTGTTATTATTTTCGTGTAAAACTAAGTTTGCATTGCAAATATATTGAAAAATTTCGTAGGAAGAAAAACTACCTGACAGGAAATGACCAACAAATTGCACAATGTTCATAATTTTCTTTTAGATTCCGTGCACTCTCCCAAGTGAAAGTGAGGAGCTGAATTGACTCGAGGGGAGGGCGGTGTTATACATGAAGCATCAATATCTTTATTAGTTCTGAGTCTAGAAGAACTTTATCCTATTTAATTGTCTTTACTATCTTTAATACTCTGTGTTTGTATCTTTTTGGAATTTATTTTCGATCTTCGTTAAGTGTCTGTACGTTGTTGGATCTTTTCTATGATTTTTTCTCAGATTTCTTGCCTGGCCGTATTTCAAAATGGGTAAGAACCAAGCATACAAAGCAATGCAGAAAGCCAGGCTGGGATCCTCAAGTTCGGCTGGGCCGGTTGAAATTGAAGATGGAATGGTTTGTACCCTTCCACACTACTACCCCTGCTTAGTCACTTTCCTTGAGACTGTCATAATTGAAAAATCGCTCTCGTGATGTTCAATTTTATACCATCTCGATCGGTGGCATTTTCATGCTAGGGAAGTTTATAATCAATCAATTTTATTTACTCTGTTTTAGTAGACTCAATGGGTCTCTGAATGTAATAAAATGTCAGTTTAGCTGTAGATTCATGATAAGTTTACTTGATTTTTTGGATTTGTATAATGTTTTATCGATTAAAAGCATATATATCTATTGCATTCTTCTTTTCCCTAGGTTCCACAAAACATATAAGTCTCGCAGCGAATAGAAGAATATTTTGAGAAGGTGACATTTTGTGGTTTCTTTGTTGTAGTATTGATTAATATTTTCTTGGGGCACTCGGGGGGGTTCTTAATCTTACAAATTAGCGCCGGGTGTCGTTCCCCACCCTCCCCGGCATTTCTGTTGCATCACTTTCTCGTTTTCGATATCGTGACTGTAAAGTCTGACATTTTATTGGGAAGGATTGTTTTTCTCATATCCTTTGTTATCATTATTATACTCATTCTGAGTTCATACTTTTCTTTATCTAGCTTTAGTTTTTTTTTAAACACTGTATCCTTTGCATCTGGTGCCATTGGAATCGAGTCGCTACTTCTCTTGTATTGAAAATTCTAAAGAAACAAGAAGAAGCTCTTCTCGGTAACGATACTTAATGATGCCTTGATTTAAGTGATATATTGGCTTGAGTTATGCAATTTCCGTTTAGAAATAGCATCGTAATCCTGCATAAGAATAAGAATAAATAGTTATTTTCCCTTTATGAATCATCGATAAAGTAGTCTGACTCTGTCACTGCTTGGATGTTCATTTTGATGGCTATATGATCTGTTGGAGAGCAAATCCAAGTTAGCCCTGGATAATTGGTTGATGAGAGGCCTTTTATTAATGAAGTAAGATTTTTTATTTATTTATATTTTCTTTGTACATTAGTTGAAATTCTGATGCTAAATTATTTATCAGTATATTAGGGATATTATCTTCTCCTTTATTGTTATTGATGAGGACTGTCTCAGGTGGATGGTTCATTTCATTCACCAGAGTGGCATGCTGCTCGTTTGGCCAGCCTTAATACGTCTCACACGATTACCTGGGAGGAATATAAGAAGAAGCAAAAGGTAAGTTTCCATGGACCGAATTCTTTGCCCAAGTGTATTTAACATATAATTGGTAACGTACGAGGATTATACACACCGTCCTCGACCATATTATATTGATGTCTTGTCAATATATAACCAGCACATTCTTTTTCTTATCACTAATAAAGTAATCACTTATGATTACATTAAGTATGGCAGTTTTGCTTCTTCACGGACAACTGTTCGGTGTCGTATATTTTCATATCTGTCTTCGTTTAACATCATGGGGAATTGTTTGTTGCCATGATTATTAACTTGTTTACCTGACACCTTCATGCGCCAATTGGTGCTACAGGAAGATGAGTTGAAAAAGGGAGAGCTAGAAGCAGATACAGATAGAATGATGAAAGAATATCGAGCGCAATTGGATGCTGAGCGGGCACGTAAACTTGCTCAGGGGAGAAATTGTTCTAGTAGCAAGAGTGGTCATGAAAAGGGTACGTTTGATGAATTTTGATATTAATTAGATACATGAGATCTTCTAAAGTGATTAGCATTACAGAAAGGAAGAACAGAGATTTAAAGAAGCGGAGCAAAAGAAGGAGAAAGGTGCTGACATTTTCCAACTCTTACAACTCTTACTGCTCCATTCTGCTATATTGATTTTTGATATTGTTTGCTAAATTTGAGCTGAAAAATGTTGCTGAACCTTGTCGACACGCCACTCAAGTTACTATGGTCATATCGATAGCATCGAAGTATTCTCATGTCGACCATCTTATACGTTTCGTTTTTTAGAAACCGAAAATTATGTAAAAATAGTCCATTTTACTTTTTCTGTCGTAGCATTCGAGGAGGAAATCATCCGAGTCTAGCTCCTCAAGTTCACCCTCGGATTCATCCAGCAGCGACGAAGAAGAAAGAGAATCTAGAAGATCCAGATCCAGATCAAAGAGATCGAAGAGGGAAAAGAAGCACAAGTCTAGAACCAAGCACTCTTCAAGCGACGATGAAGAGGCCGATGGCCCCGTGCCACTTTCAAGATTCTTTGAGAAAGTGAAGAATTAAAGGGGCATTTGTTCTGTAATGTTTATAGAATTTCTAGTCTTGAAATGGCGTATTCGATCCTCGCCTTCTTTTTCTTCTAAATTTGCATTCAAGTATTGTTGTTTCGACTATTGGCTTTCTAGAGTAGGAGCGGTCTATGTCGTAGAAGATCGGACCAATGGTCGTAGGAGATCGGATCAATGGGATGAAAAGCGAGTCATTTAACAACCAGGTGATACAAAACTGCAAATATTCAACCCAGAGAGTAACGACCAGTTTGTTCCATTTTCCTTTAGGATAATGCATGCGAAGGGAAGAAAAAATTGAAAGGTGTCGATTAGAAGGCAAGTTTTATTGTATGTAAGCAAGAAAAAGGTTTTCAAAATACTCTAAATCCATGAACGACAGCTTTTAATG

mRNA sequence

TAGGTTGGGGTGGAACTCTATACGGATTAACTCAAAATACTCCCCAACCGTGCGACCATTTTATAGAGTATTATATTATTGATATGTCGACAATAGTGTATGAATACTATATTAGTAACATATTAGCAGTATTATGTACGAGTAGTTTTGTTTTCGGCTAGTTTGAACTTTTTATCTTTATTGTTTGGGTTGAGATTAGGGTTAGATTTGCAAATCGGTGTCGGGATAATTTTCAGATTCGAGTCTGGCGACTCCGATTGCCGGTTGCATTTGAAGAACCCTCTAGGGTTTACGTTCAGATTTCTTGCCTGGCCGTATTTCAAAATGGGTAAGAACCAAGCATACAAAGCAATGCAGAAAGCCAGGCTGGGATCCTCAAGTTCGGCTGGGCCGGTTGAAATTGAAGATGGAATGGTGGATGGTTCATTTCATTCACCAGAGTGGCATGCTGCTCGTTTGGCCAGCCTTAATACGTCTCACACGATTACCTGGGAGGAATATAAGAAGAAGCAAAAGGAAGATGAGTTGAAAAAGGGAGAGCTAGAAGCAGATACAGATAGAATGATGAAAGAATATCGAGCGCAATTGGATGCTGAGCGGGCACGTAAACTTGCTCAGGGGAGAAATTGTTCTAGTAGCAAGAGTGGTCATGAAAAGGAAAGGAAGAACAGAGATTTAAAGAAGCGGAGCAAAAGAAGGAGAAAGCATTCGAGGAGGAAATCATCCGAGTCTAGCTCCTCAAGTTCACCCTCGGATTCATCCAGCAGCGACGAAGAAGAAAGAGAATCTAGAAGATCCAGATCCAGATCAAAGAGATCGAAGAGGGAAAAGAAGCACAAGTCTAGAACCAAGCACTCTTCAAGCGACGATGAAGAGGCCGATGGCCCCGTGCCACTTTCAAGATTCTTTGAGAAAGTGAAGAATTAAAGGGGCATTTGTTCTGTAATGTTTATAGAATTTCTAGTCTTGAAATGGCGTATTCGATCCTCGCCTTCTTTTTCTTCTAAATTTGCATTCAAGTATTGTTGTTTCGACTATTGGCTTTCTAGAGTAGGAGCGGTCTATGTCGTAGAAGATCGGACCAATGGTCGTAGGAGATCGGATCAATGGGATGAAAAGCGAGTCATTTAACAACCAGGTGATACAAAACTGCAAATATTCAACCCAGAGAGTAACGACCAGTTTGTTCCATTTTCCTTTAGGATAATGCATGCGAAGGGAAGAAAAAATTGAAAGGTGTCGATTAGAAGGCAAGTTTTATTGTATGTAAGCAAGAAAAAGGTTTTCAAAATACTCTAAATCCATGAACGACAGCTTTTAATG

Coding sequence (CDS)

ATGGGTAAGAACCAAGCATACAAAGCAATGCAGAAAGCCAGGCTGGGATCCTCAAGTTCGGCTGGGCCGGTTGAAATTGAAGATGGAATGGTGGATGGTTCATTTCATTCACCAGAGTGGCATGCTGCTCGTTTGGCCAGCCTTAATACGTCTCACACGATTACCTGGGAGGAATATAAGAAGAAGCAAAAGGAAGATGAGTTGAAAAAGGGAGAGCTAGAAGCAGATACAGATAGAATGATGAAAGAATATCGAGCGCAATTGGATGCTGAGCGGGCACGTAAACTTGCTCAGGGGAGAAATTGTTCTAGTAGCAAGAGTGGTCATGAAAAGGAAAGGAAGAACAGAGATTTAAAGAAGCGGAGCAAAAGAAGGAGAAAGCATTCGAGGAGGAAATCATCCGAGTCTAGCTCCTCAAGTTCACCCTCGGATTCATCCAGCAGCGACGAAGAAGAAAGAGAATCTAGAAGATCCAGATCCAGATCAAAGAGATCGAAGAGGGAAAAGAAGCACAAGTCTAGAACCAAGCACTCTTCAAGCGACGATGAAGAGGCCGATGGCCCCGTGCCACTTTCAAGATTCTTTGAGAAAGTGAAGAATTAA

Protein sequence

MGKNQAYKAMQKARLGSSSSAGPVEIEDGMVDGSFHSPEWHAARLASLNTSHTITWEEYKKKQKEDELKKGELEADTDRMMKEYRAQLDAERARKLAQGRNCSSSKSGHEKERKNRDLKKRSKRRRKHSRRKSSESSSSSSPSDSSSSDEEERESRRSRSRSKRSKREKKHKSRTKHSSSDDEEADGPVPLSRFFEKVKN
Homology
[Close]
BLAST of Cp4.1LG01g16250 vs. TrEMBL
Match: A0A0A0KWA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652810 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 9.9e-81
Identity = 179/201 (89.05%), Postives = 190/201 (94.53%), Query Frame = 1 

Query: 1   MGKNQAYKAMQKARLGSSSSAGPVEIEDGMVDGSFHSPEWHAARLASLNTSHTITWEEYK 60
           MGKNQAYKAMQKARLGSSSS GP EIEDGMVDGSFHSP WHAARLASLNTSHTITWEEYK
Sbjct: 75  MGKNQAYKAMQKARLGSSSSTGPAEIEDGMVDGSFHSPAWHAARLASLNTSHTITWEEYK 134

Query: 61  KKQKEDELKKGELEADTDRMMKEYRAQLDAERARKLAQGRNCSSSKSGHEKERKNRDLKK 120
           +KQKEDELK+GELEADTDRMMKEYRAQLDAERARKLA GRN SSSK GHEK+RKNR+LKK
Sbjct: 135 RKQKEDELKRGELEADTDRMMKEYRAQLDAERARKLAHGRNRSSSKIGHEKDRKNRELKK 194

Query: 121 RSKRRRKHSRRKSSESSSSSSPSDSSSSDEEERESRRSRSRSKRSKREKKHKSRTKHSSS 180
           RSK++RKHS+RK SE SSSSS SDSSSSDEEERESRRS+S+SKRSKREKKH+SRTKHSSS
Sbjct: 195 RSKKKRKHSKRKLSECSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSS 254

Query: 181 D-DEEADGPVPLSRFFEKVKN 201
           D +EE DGPVPLSRFFEKVKN
Sbjct: 255 DNEEETDGPVPLSRFFEKVKN 275

[Close]
BLAST of Cp4.1LG01g16250 vs. TrEMBL
Match: M5W3H0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011727mg PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.1e-74
Identity = 166/200 (83.00%), Postives = 187/200 (93.50%), Query Frame = 1 

Query: 1   MGKNQAYKAMQKARLGSSSSAGPVEIEDGMVDGSFHSPEWHAARLASLNTSHTITWEEYK 60
           MGKNQAYKAMQ+ARLGSSS AGP E+EDGMVDGSFHSPEWHAARLASL TSHTITWEEYK
Sbjct: 1   MGKNQAYKAMQRARLGSSS-AGPDEVEDGMVDGSFHSPEWHAARLASLKTSHTITWEEYK 60

Query: 61  KKQKEDELKKGELEADTDRMMKEYRAQLDAERARKLAQGRNCSSSKSGHEKERKNRDLKK 120
           KKQKEDE++KGELE DTDRMM+EYRAQLDAERARKLA GRN SSSKS  +K+RK++DLKK
Sbjct: 61  KKQKEDEIRKGELEKDTDRMMREYRAQLDAERARKLANGRNHSSSKSDRKKDRKDKDLKK 120

Query: 121 RSKRRRKHSRRKSSESSSSSSPSDSSSSDEEERESRRSRSRSKRSKREKKHKSRTKHSSS 180
           RS R+RKHSRR+SSESSSSSS SDS SS+EEER+S+RS+SRSKR+++EKKH+SRTKHSSS
Sbjct: 121 RSSRKRKHSRRRSSESSSSSSSSDSYSSEEEERDSKRSKSRSKRTRKEKKHRSRTKHSSS 180

Query: 181 DDEEADGPVPLSRFFEKVKN 201
           DD+EADGPVPLSRFF  VK+
Sbjct: 181 DDDEADGPVPLSRFFGSVKS 199

[Close]
BLAST of Cp4.1LG01g16250 vs. TrEMBL
Match: V4TPT7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022332mg PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 4.0e-74
Identity = 166/200 (83.00%), Postives = 186/200 (93.00%), Query Frame = 1 

Query: 1   MGKNQAYKAMQKARLGSSSSAGPVEIEDGMVDGSFHSPEWHAARLASLNTSHTITWEEYK 60
           MGKNQAYKAMQ+ARLGSSS+A P EIEDGMVDGSFHSPEWHAARLASL TSHT+TWEE+K
Sbjct: 1   MGKNQAYKAMQRARLGSSSAA-PDEIEDGMVDGSFHSPEWHAARLASLKTSHTVTWEEFK 60

Query: 61  KKQKEDELKKGELEADTDRMMKEYRAQLDAERARKLAQGRNCSSSKSGHEKERKNRDLKK 120
           KKQKEDEL+KGELE DTDRMM+EYRAQLDAERARKLAQGRN S SKS  +K+RK+RDLKK
Sbjct: 61  KKQKEDELRKGELEKDTDRMMREYRAQLDAERARKLAQGRNHSGSKSDRKKDRKDRDLKK 120

Query: 121 RSKRRRKHSRRKSSESSSSSSPSDSSSSDEEERESRRSRSRSKRSKREKKHKSRTKHSSS 180
           RS ++RKHSRR+SS+SSSSSS S+SSSSDEEERESR+S+SRSK+SK+EKKH+SRTKHS S
Sbjct: 121 RSSKKRKHSRRRSSDSSSSSSSSESSSSDEEERESRKSKSRSKKSKKEKKHRSRTKHSGS 180

Query: 181 DDEEADGPVPLSRFFEKVKN 201
           DDEEA GPVPLSRFFE  K+
Sbjct: 181 DDEEAGGPVPLSRFFESTKS 199

[Close]
BLAST of Cp4.1LG01g16250 vs. TrEMBL
Match: B9SFT0_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0722870 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.2e-73
Identity = 162/200 (81.00%), Postives = 187/200 (93.50%), Query Frame = 1 

Query: 1   MGKNQAYKAMQKARLGSSSSAGPVEIEDGMVDGSFHSPEWHAARLASLNTSHTITWEEYK 60
           MGKNQAYKAMQ+ARLGSSS AGP E+EDGMVDGSFH+P WHAARLASLNTSHT+TWEE+K
Sbjct: 1   MGKNQAYKAMQRARLGSSS-AGPEEVEDGMVDGSFHTPAWHAARLASLNTSHTVTWEEFK 60

Query: 61  KKQKEDELKKGELEADTDRMMKEYRAQLDAERARKLAQGRNCSSSKSGHEKERKNRDLKK 120
           +KQKEDE++KGELEADTDRMM+EYRAQLDAERARKLA GRN SSSKS H+K+RK +D KK
Sbjct: 61  RKQKEDEIRKGELEADTDRMMREYRAQLDAERARKLAHGRNHSSSKSNHKKDRKEKDSKK 120

Query: 121 RSKRRRKHSRRKSSESSSSSSPSDSSSSDEEERESRRSRSRSKRSKREKKHKSRTKHSSS 180
           RS R+RKHSRR+SS+SSSSSS SDSSSSD+EERESRRS+SRSKR+K+EKKH+SR+KHS +
Sbjct: 121 RSSRKRKHSRRRSSDSSSSSSSSDSSSSDDEERESRRSKSRSKRTKKEKKHRSRSKHSGN 180

Query: 181 DDEEADGPVPLSRFFEKVKN 201
           D+EEADGPVPLSRFF  +K+
Sbjct: 181 DEEEADGPVPLSRFFGSLKS 199

[Close]
BLAST of Cp4.1LG01g16250 vs. TrEMBL
Match: W9RFE6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020376 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 6.5e-72
Identity = 164/200 (82.00%), Postives = 185/200 (92.50%), Query Frame = 1 

Query: 1   MGKNQAYKAMQKARLGSSSSAGPVEIEDGMVDGSFHSPEWHAARLASLNTSHTITWEEYK 60
           MGKNQAYKAMQ+A+LGSSS AGP E+EDGMVDGSFHSPEWHAARLASL TSHTITWEE+K
Sbjct: 1   MGKNQAYKAMQRAKLGSSS-AGPDEVEDGMVDGSFHSPEWHAARLASLKTSHTITWEEFK 60

Query: 61  KKQKEDELKKGELEADTDRMMKEYRAQLDAERARKLAQGRNCSSSKSGHEKERKNRDLKK 120
           KKQKEDE++KGELE DTDRMM+EYRAQLDAERARKLAQGRN S SKS  +++RK +DLKK
Sbjct: 61  KKQKEDEMRKGELEKDTDRMMREYRAQLDAERARKLAQGRNHSGSKSDRKRDRKEKDLKK 120

Query: 121 RSKRRRKHSRRKSSESSSSSSPSDSSSSDEEERESRRSRSRSKRSKREKKHKSRTKHSSS 180
           RS ++RKHSRR+ SESSSSSS SDSSSSDEE++ESRRS+SRSKRSK+EKKH+SRTKHS S
Sbjct: 121 RSSKKRKHSRRRWSESSSSSSSSDSSSSDEEKKESRRSKSRSKRSKKEKKHRSRTKHSGS 180

Query: 181 DDEEADGPVPLSRFFEKVKN 201
           D+ EADGPVPLSRFFE VK+
Sbjct: 181 DN-EADGPVPLSRFFESVKS 198

[Close]
BLAST of Cp4.1LG01g16250 vs. TAIR10
Match: AT3G59800.1 (AT3G59800.1 unknown protein)

HSP 1 Score: 221.1 bits (562), Expect = 6.2e-58
Identity = 140/201 (69.65%), Postives = 163/201 (81.09%), Query Frame = 1 

Query: 1   MGKNQAYKAMQKARLGSSSSAGPVEIEDGMVDGSFHSPEWHAARLASLNTSHTITWEEYK 60
           MGKNQAYKAMQ++R+GSSS A P E+EDGMVDGSFH+PEWHAARLASL T+HTITWEEYK
Sbjct: 1   MGKNQAYKAMQRSRVGSSS-AQPDEVEDGMVDGSFHTPEWHAARLASLKTTHTITWEEYK 60

Query: 61  KKQKEDELKKGELEADTDRMMKEYRAQLDAERARKLAQGRNCSSSKSGHEKERKNRDLKK 120
           +KQKE+ELKKGELEADTD++M+EYRAQLDAER+ KL++GRN SS KS   K++K+RD KK
Sbjct: 61  QKQKEEELKKGELEADTDKLMREYRAQLDAERSLKLSKGRNYSSDKS--RKDKKDRDSKK 120

Query: 121 RSKRRRKHSRRKSSESSSSSSPSDSSSSDEEERESRRSRSRSKRSKREKKHK-SRTKHSS 180
           +  ++RKH    SSESSSSS          +E ESRRSRS SKRSK+EKKHK SR KHSS
Sbjct: 121 KKSKKRKH--YSSSESSSSS----------DEDESRRSRSSSKRSKKEKKHKSSRDKHSS 180

Query: 181 SDDEEADGPVPLSRFFEKVKN 201
               E DGPVPLSRFF  +KN
Sbjct: 181 KSKHETDGPVPLSRFFGNLKN 186

[Close]
BLAST of Cp4.1LG01g16250 vs. TAIR10
Match: AT2G43795.2 (AT2G43795.2 unknown protein)

HSP 1 Score: 104.4 bits (259), Expect = 8.4e-23
Identity = 81/173 (46.82%), Postives = 116/173 (67.05%), Query Frame = 1 

Query: 31  VDGSFHSPEWHAARLASLNTSHTITWEEYKKKQKEDELKKGELEADTDRMMKEYRAQLDA 90
           +DGSFHSPEWHAARLASL T+HT+TWEEYK+KQKE+ELKK E+EADTD++M+EYRAQLDA
Sbjct: 1   MDGSFHSPEWHAARLASLKTTHTLTWEEYKQKQKEEELKKQEVEADTDKLMREYRAQLDA 60

Query: 91  ERARKLAQGRNCSSSKSGHEKERKNRDLKKRSKRRRKHSRRKSSESSSSSSPSDSSSSDE 150
           ERA KL++GRN SS  S  +  R++  ++     R + ++R+S       + +   +   
Sbjct: 61  ERAMKLSKGRNYSSDIS-RKGRRESSQIESAEIPRGRKAKRESIRKGDHQTQAHLLNLQV 120

Query: 151 EERESRRSRSRSKRSKREKKHKS---RTKHSSSDDEEADGPVPLSRFFEKVKN 201
             + +  S+ +  R +R + + S    T++ S D  EADGP P S+FF  +K+
Sbjct: 121 VTKTNLGSQGQVLRGQRGRGNTSLEADTQNQSKD--EADGPAPQSKFFGSLKS 170

[Close]
BLAST of Cp4.1LG01g16250 vs. NCBI nr
Match: gi|449447633|ref|XP_004141572.1| (PREDICTED: protein FAM133 [Cucumis sativus])

HSP 1 Score: 307.8 bits (787), Expect = 1.4e-80
Identity = 179/201 (89.05%), Postives = 190/201 (94.53%), Query Frame = 1 

Query: 1   MGKNQAYKAMQKARLGSSSSAGPVEIEDGMVDGSFHSPEWHAARLASLNTSHTITWEEYK 60
           MGKNQAYKAMQKARLGSSSS GP EIEDGMVDGSFHSP WHAARLASLNTSHTITWEEYK
Sbjct: 1   MGKNQAYKAMQKARLGSSSSTGPAEIEDGMVDGSFHSPAWHAARLASLNTSHTITWEEYK 60

Query: 61  KKQKEDELKKGELEADTDRMMKEYRAQLDAERARKLAQGRNCSSSKSGHEKERKNRDLKK 120
           +KQKEDELK+GELEADTDRMMKEYRAQLDAERARKLA GRN SSSK GHEK+RKNR+LKK
Sbjct: 61  RKQKEDELKRGELEADTDRMMKEYRAQLDAERARKLAHGRNRSSSKIGHEKDRKNRELKK 120

Query: 121 RSKRRRKHSRRKSSESSSSSSPSDSSSSDEEERESRRSRSRSKRSKREKKHKSRTKHSSS 180
           RSK++RKHS+RK SE SSSSS SDSSSSDEEERESRRS+S+SKRSKREKKH+SRTKHSSS
Sbjct: 121 RSKKKRKHSKRKLSECSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSS 180

Query: 181 D-DEEADGPVPLSRFFEKVKN 201
           D +EE DGPVPLSRFFEKVKN
Sbjct: 181 DNEEETDGPVPLSRFFEKVKN 201

[Close]
BLAST of Cp4.1LG01g16250 vs. NCBI nr
Match: gi|700197550|gb|KGN52727.1| (hypothetical protein Csa_5G652810 [Cucumis sativus])

HSP 1 Score: 307.8 bits (787), Expect = 1.4e-80
Identity = 179/201 (89.05%), Postives = 190/201 (94.53%), Query Frame = 1 

Query: 1   MGKNQAYKAMQKARLGSSSSAGPVEIEDGMVDGSFHSPEWHAARLASLNTSHTITWEEYK 60
           MGKNQAYKAMQKARLGSSSS GP EIEDGMVDGSFHSP WHAARLASLNTSHTITWEEYK
Sbjct: 75  MGKNQAYKAMQKARLGSSSSTGPAEIEDGMVDGSFHSPAWHAARLASLNTSHTITWEEYK 134

Query: 61  KKQKEDELKKGELEADTDRMMKEYRAQLDAERARKLAQGRNCSSSKSGHEKERKNRDLKK 120
           +KQKEDELK+GELEADTDRMMKEYRAQLDAERARKLA GRN SSSK GHEK+RKNR+LKK
Sbjct: 135 RKQKEDELKRGELEADTDRMMKEYRAQLDAERARKLAHGRNRSSSKIGHEKDRKNRELKK 194

Query: 121 RSKRRRKHSRRKSSESSSSSSPSDSSSSDEEERESRRSRSRSKRSKREKKHKSRTKHSSS 180
           RSK++RKHS+RK SE SSSSS SDSSSSDEEERESRRS+S+SKRSKREKKH+SRTKHSSS
Sbjct: 195 RSKKKRKHSKRKLSECSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSS 254

Query: 181 D-DEEADGPVPLSRFFEKVKN 201
           D +EE DGPVPLSRFFEKVKN
Sbjct: 255 DNEEETDGPVPLSRFFEKVKN 275

[Close]
BLAST of Cp4.1LG01g16250 vs. NCBI nr
Match: gi|659119501|ref|XP_008459690.1| (PREDICTED: protein FAM133 isoform X1 [Cucumis melo])

HSP 1 Score: 307.0 bits (785), Expect = 2.4e-80
Identity = 178/201 (88.56%), Postives = 191/201 (95.02%), Query Frame = 1 

Query: 1   MGKNQAYKAMQKARLGSSSSAGPVEIEDGMVDGSFHSPEWHAARLASLNTSHTITWEEYK 60
           MGKNQAYKAMQKARLGSSSS GP EIEDGMVDGSFHSP WHAARLASLNTSHTITWEEYK
Sbjct: 1   MGKNQAYKAMQKARLGSSSSTGPAEIEDGMVDGSFHSPAWHAARLASLNTSHTITWEEYK 60

Query: 61  KKQKEDELKKGELEADTDRMMKEYRAQLDAERARKLAQGRNCSSSKSGHEKERKNRDLKK 120
           +KQKEDELK+GELEADTDRMMKEYRAQLDAERARKLA GRN SSSK+GHEK+RKNR+LKK
Sbjct: 61  RKQKEDELKRGELEADTDRMMKEYRAQLDAERARKLAHGRNRSSSKTGHEKDRKNRELKK 120

Query: 121 RSKRRRKHSRRKSSESSSSSSPSDSSSSDEEERESRRSRSRSKRSKREKKHKSRTKHSSS 180
           RSK++RKHS+RK SE SSSSS SDSSSSDEEERESRRS+S+SKRSKREKKH+SRTKHSSS
Sbjct: 121 RSKKKRKHSKRKLSECSSSSSSSDSSSSDEEERESRRSKSKSKRSKREKKHRSRTKHSSS 180

Query: 181 D-DEEADGPVPLSRFFEKVKN 201
           D +EE DGPVPLSRFFEKVK+
Sbjct: 181 DNEEETDGPVPLSRFFEKVKH 201

[Close]
BLAST of Cp4.1LG01g16250 vs. NCBI nr
Match: gi|595807415|ref|XP_007202604.1| (hypothetical protein PRUPE_ppa011727mg [Prunus persica])

HSP 1 Score: 286.2 bits (731), Expect = 4.4e-74
Identity = 166/200 (83.00%), Postives = 187/200 (93.50%), Query Frame = 1 

Query: 1   MGKNQAYKAMQKARLGSSSSAGPVEIEDGMVDGSFHSPEWHAARLASLNTSHTITWEEYK 60
           MGKNQAYKAMQ+ARLGSSS AGP E+EDGMVDGSFHSPEWHAARLASL TSHTITWEEYK
Sbjct: 1   MGKNQAYKAMQRARLGSSS-AGPDEVEDGMVDGSFHSPEWHAARLASLKTSHTITWEEYK 60

Query: 61  KKQKEDELKKGELEADTDRMMKEYRAQLDAERARKLAQGRNCSSSKSGHEKERKNRDLKK 120
           KKQKEDE++KGELE DTDRMM+EYRAQLDAERARKLA GRN SSSKS  +K+RK++DLKK
Sbjct: 61  KKQKEDEIRKGELEKDTDRMMREYRAQLDAERARKLANGRNHSSSKSDRKKDRKDKDLKK 120

Query: 121 RSKRRRKHSRRKSSESSSSSSPSDSSSSDEEERESRRSRSRSKRSKREKKHKSRTKHSSS 180
           RS R+RKHSRR+SSESSSSSS SDS SS+EEER+S+RS+SRSKR+++EKKH+SRTKHSSS
Sbjct: 121 RSSRKRKHSRRRSSESSSSSSSSDSYSSEEEERDSKRSKSRSKRTRKEKKHRSRTKHSSS 180

Query: 181 DDEEADGPVPLSRFFEKVKN 201
           DD+EADGPVPLSRFF  VK+
Sbjct: 181 DDDEADGPVPLSRFFGSVKS 199

[Close]
BLAST of Cp4.1LG01g16250 vs. NCBI nr
Match: gi|645275924|ref|XP_008243046.1| (PREDICTED: corepressor interacting with RBPJ 1 [Prunus mume])

HSP 1 Score: 285.8 bits (730), Expect = 5.8e-74
Identity = 166/200 (83.00%), Postives = 187/200 (93.50%), Query Frame = 1 

Query: 1   MGKNQAYKAMQKARLGSSSSAGPVEIEDGMVDGSFHSPEWHAARLASLNTSHTITWEEYK 60
           MGKNQAYKAMQ+ARLGSSS AGP E+EDGMVDGSFHSPEWHAARLASL TSHTITWEEYK
Sbjct: 1   MGKNQAYKAMQRARLGSSS-AGPDEVEDGMVDGSFHSPEWHAARLASLKTSHTITWEEYK 60

Query: 61  KKQKEDELKKGELEADTDRMMKEYRAQLDAERARKLAQGRNCSSSKSGHEKERKNRDLKK 120
           KKQKEDE++KGELE DTDRMM+EYRAQLDAERARKLA GRN SSSKS  +K+RK++DLKK
Sbjct: 61  KKQKEDEIRKGELEKDTDRMMREYRAQLDAERARKLANGRNHSSSKSDRKKDRKDKDLKK 120

Query: 121 RSKRRRKHSRRKSSESSSSSSPSDSSSSDEEERESRRSRSRSKRSKREKKHKSRTKHSSS 180
           RS R+RKHSRR+SSESSSSSS S+S SS+EEER+S+RS+SRSKR+K+EKKH+SRTKHSSS
Sbjct: 121 RSSRKRKHSRRRSSESSSSSSSSESYSSEEEERDSKRSKSRSKRTKKEKKHRSRTKHSSS 180

Query: 181 DDEEADGPVPLSRFFEKVKN 201
           DD+EADGPVPLSRFF  VK+
Sbjct: 181 DDDEADGPVPLSRFFGSVKS 199

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g16250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g16250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWA3_CUCSA9.9e-8189.05Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652810 PE=4 SV=1[more]
M5W3H0_PRUPE3.1e-7483.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011727mg PE=4 SV=1[more]
V4TPT7_9ROSI4.0e-7483.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022332mg PE=4 SV=1[more]
B9SFT0_RICCO1.2e-7381.00Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0722870 PE=4 ... [more]
W9RFE6_9ROSA6.5e-7282.00Uncharacterized protein OS=Morus notabilis GN=L484_020376 PE=4 SV=1[more]
BLAST of Cp4.1LG01g16250 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G59800.16.2e-5869.65 unknown protein[more]
AT2G43795.28.4e-2346.82 unknown protein[more]
BLAST of Cp4.1LG01g16250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449447633|ref|XP_004141572.1|1.4e-8089.05PREDICTED: protein FAM133 [Cucumis sativus][more]
gi|700197550|gb|KGN52727.1|1.4e-8089.05hypothetical protein Csa_5G652810 [Cucumis sativus][more]
gi|659119501|ref|XP_008459690.1|2.4e-8088.56PREDICTED: protein FAM133 isoform X1 [Cucumis melo][more]
gi|595807415|ref|XP_007202604.1|4.4e-7483.00hypothetical protein PRUPE_ppa011727mg [Prunus persica][more]
gi|645275924|ref|XP_008243046.1|5.8e-7483.00PREDICTED: corepressor interacting with RBPJ 1 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g16250.1Cp4.1LG01g16250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36021FAMILY NOT NAMEDcoord: 2..200
score: 9.7
NoneNo IPR availablePANTHERPTHR36021:SF1SUBFAMILY NOT NAMEDcoord: 2..200
score: 9.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g16250CmaCh18G006790Cucurbita maxima (Rimu)cmacpeB431
Cp4.1LG01g16250CmaCh04G018470Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g16250CmoCh04G019420Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g16250Carg24404Silver-seed gourdcarcpeB0196
Cp4.1LG01g16250Carg21213Silver-seed gourdcarcpeB0971
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g16250Cp4.1LG09g05710Cucurbita pepo (Zucchini)cpecpeB033
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g16250Melon (DHL92) v3.6.1cpemedB424
Cp4.1LG01g16250Cucumber (Chinese Long) v3cpecucB0544
Cp4.1LG01g16250Cucurbita pepo (Zucchini)cpecpeB406
Cp4.1LG01g16250Cucumber (Gy14) v1cgycpeB0123
Cp4.1LG01g16250Cucurbita maxima (Rimu)cmacpeB186
Cp4.1LG01g16250Cucurbita moschata (Rifu)cmocpeB162
Cp4.1LG01g16250Cucurbita moschata (Rifu)cmocpeB393
Cp4.1LG01g16250Wild cucumber (PI 183967)cpecpiB440
Cp4.1LG01g16250Cucumber (Chinese Long) v2cpecuB440
Cp4.1LG01g16250Bottle gourd (USVL1VR-Ls)cpelsiB353
Cp4.1LG01g16250Watermelon (Charleston Gray)cpewcgB364
Cp4.1LG01g16250Watermelon (97103) v1cpewmB463
Cp4.1LG01g16250Melon (DHL92) v3.5.1cpemeB364
Cp4.1LG01g16250Cucumber (Gy14) v2cgybcpeB649