Cp4.1LG01g15820 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g15820
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRING finger protein
LocationCp4.1LG01 : 9724403 .. 9727438 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCAGAACCCAAAAGATCTTTTCATGGTTCTTAACGTCTGATACCCGAGCCTTGTTGTTCCACTACTTGAATTAGGACTTCTCATGGGTTTGGTTTTGCATTTGTAGGGCAGCGATGTTCTCGAGAGATTACGGTGGATTTTGCATTCAAATGAGATTACAATACAGCCCATTTGCTCTCTTTTTTCTTCATTGGATTGAATGGATGGATTTCAGTTGCACAGATCCTCTTCCAAGTTTCTTGGGCCTTTTCCACATACTCTTGTACAAGGTGCTTCCCTCAACTCTTGCAGCATATTCACAACCTGAAATCTAAAGCTACTCAATGAAATCTAAAGCCCTCTCAATGTTTACTCAAGTATGCAGGTGTACGTCGATGGACACCAACCGTTGGCGTCACCACGAGAAAGAAAAGCCACCCTCAAGGAGTTCTATGGTCTGCACTTCTCTCCTAACTTTTGCTTTTTCCAGAGACAAACAGATCAAATTCATTAACTATGAAACCATGGCAGCTGTAATATACCCTTCACTTAGGCAACTTCGAAGTGGGCACCTCAAGTCGAAAGAAGAGACTTCTTCTAGGAAGAGAATAGAAGAACAAAAGGGGCCGTCTAATGAGGATCTTCAGAGGGATGAGGAGTGTGGGATATGCATGGAAAACTGCAGAGATGTTGTGTTGCCAAATTGTGGCCATTCGATGTGCCTCAGCTGCTTTCAGGACTGGTACTAACAATTTTTCTTCCTTCTCAGCCTCAAACTTTCTTATTATCAGCTAACAACAGGAGTTCTGTCTGTTGTAATCTTGTCTGCAGGAGTCCGAGGTCGCGTTCCTGTCCCTTCTGCCGCAACTGTCTAAATAGGTTGAGCGCCAGGGACCTGTGGGTTCTTACAAGCGACACCGACATTGTCGACTCGGAAACTCTTACCAAGGAAAATCTAATACATTTCTACCTTTATATAGAAAACCTGCCACTGTTTCAACCAGACGTGAGTATTTTAATACCAGATTACATGTTGTGATCCGTCAGAAGCATAATCCAATGTGTTGGCCACCACCAACTTCAACTGGCTACAATTTAAGCTGTAAGCTTGATTCTCTGCTACTGTCATCTGTTCAAATTCAAGAGATTGCAAGTAGAAAAACAGCATTGCTTTGTATGGTTCCTCGAGCACTGTCATTTGAACAATGTAATAAACTTCAACTTTCTAATAAATAACTAAACACAAGGCAGATGGGGCAGTTTCAATCAAAGTAGTTTAAGAAAAAAGCTTTTAGGTGTCGCAGTGGAACAGTTGATATCAGTGATGGCCGGTCTTGCGCTCGGACAATCTCAGGACACTGAGACATCCTTAGGAGTGCTTGTTCTACAGAATCCTGATGCATTCTGATTCAATTATGGAATTGGAGATCTGTGATCTCAAGCATATAATTAACAGACTAATTCAATGAGAAAAGATCCGTTCCTTACAAATTATCTGTTCAAACAGAATCTTGGGTCTCATTATATTGTTGTAAAATGGTGAAAGCTGCCTTCTTTTAGGACATCCATTGAGGGTCTTGTTCATGCATGAGTATTGGCTCTACTACTTAACTAGGCTACAGACAGAGATTAAAGATTCATTAAAAACTCTTACATGGCTTTTCATGCCGAGCTTGATCCTCTGGCAAGCAAGAACACTACTTCTGGAATGAAGTTCCAGCTACTGATATTCAATTCAAACAAGAACAGAAGAAACCATCTGCCTTCTCCACCAGATTGATATCAATTTTTTTTCGTTTTCCTTTCCAATGTTCAACATTCTGATGAACCAATTCTCTCAAAAATTAAAGCGGTTTGTTATTCCATAAATAATCCCAAACGCTGTAACGAAGCTTTGTTGAATAGATTACAAAAGCCACGAAGAAATTGCAAGAACTTCATCTTCATGGCTGTTTACATAACTACAACTACTCTTGAGGACTACTCCGGACTCTTCACTGAACATTGATATCTACAATTTTACTCGTTACAACAGCCTTCGGTATTGTTATGTACAAAACCCCATCTTTTACCTCTGCTTTGATCTGCTCAAATTGAACATTCTCAGGCAATGCAATTCTGCTACTGTATCTTCCATAGCTCTTAGCAGACCAATCTCCTTCTTTTTCTTCTTCTTCTCCTCCTACCTTCCCATTTTCTGAACTGGTCTTCTTCACCTTCTCAGCCTTCACAACCAGCATTTTCTCCTCCACCCACACCTTCACATCATCCTTCGTCATACCTGGCATGTCGAACCTCATCTTGTACTCATTTTCCCCTTCCTTGATCTCCCATGGAGTTCTTCCCCTGCTGTACCCCGCTCCATCGCTCGAAAATGGCGGTGACGGCCATGCCCCGGAGTAAGCAAATGGATCATCCATAATCCTCTCCATTGTTTCCATCATTTGCTGCACTGTTCTCGCCGTCGGAAATCGATCCCAAAGCCCTAGAAAAACAAACACGAGCGATTAACAAAATTCAACGAAAAGAAAAGGAATGGAAAACATTCCAACAAGTAGCAGCAAGGTTCGATTAATTACCAACAGGAGCAACAGGAGAGACTCGTTTCTTTGGTGGCTGAGTTGTTCGTTGTTCCTTCCTAGGAATTTTCTGCAGATGATCGAGATTGTCTCTGCCATCCCCCGCCATAGCTTTAATGCAACTTCTACGAGTAAATCCTTTAACCTTCTTCGGATCATTAGAGACTCTCCCAGGCGTGAAGGAGACGAATCGAGTCAGATTGGACACAGCTTGAGCCATTTAAGCGAAACCTCTGGATTATGAACGAATCTGTGGCTGTAAAGATAATTTGCAGCTTCGAAACGAGTTGGATCGAGTAGTAGGAATGAAGATTTCGTAGAATGCTTTGAGTGAAGAGAAATCTGCCATGATCGAGGTATAAAAGGAGGGAGGTGGAGTCTCTGGAGACGGAAGAAAGAACTGGAACCTCTCTTCTTCCTTCTAGATTCTCCTGGACCTTCCCTTCATTCTAGATTGCTCCACAAATCTGAGCCGTG

mRNA sequence

TCCAGAACCCAAAAGATCTTTTCATGGTTCTTAACGTCTGATACCCGAGCCTTGTTGTTCCACTACTTGAATTAGGACTTCTCATGGGTTTGGTTTTGCATTTGTAGGGCAGCGATGTTCTCGAGAGATTACGGTGGATTTTGCATTCAAATGAGATTACAATACAGCCCATTTGCTCTCTTTTTTCTTCATTGGATTGAATGGATGGATTTCAGTTGCACAGATCCTCTTCCAAGTTTCTTGGGCCTTTTCCACATACTCTTGTACAAGGTGTACGTCGATGGACACCAACCGTTGGCGTCACCACGAGAAAGAAAAGCCACCCTCAAGGAGTTCTATGCTGTAATATACCCTTCACTTAGGCAACTTCGAAGTGGGCACCTCAAGTCGAAAGAAGAGACTTCTTCTAGGAAGAGAATAGAAGAACAAAAGGGGCCGTCTAATGAGGATCTTCAGAGGGATGAGGAGTGTGGGATATGCATGGAAAACTGCAGAGATGTTGTGTTGCCAAATTGTGGCCATTCGATGTGCCTCAGCTGCTTTCAGGACTGGAGTCCGAGGTCGCGTTCCTGTCCCTTCTGCCGCAACTGTCTAAATAGGTTGAGCGCCAGGGACCTGTGGGTTCTTACAAGCGACACCGACATTGTCGACTCGGAAACTCTTACCAAGGAAAATCTAATACATTTCTACCTTTATATAGAAAACCTGCCACTGTTTCAACCAGACGTGAGTATTTTAATACCAGATTACATGTTGTGATCCGTCAGAAGCATAATCCAATGTGTTGGCCACCACCAACTTCAACTGGCTACAATTTAAGCTGTAAGCTTGATTCTCTGCTACTGTCATCTGTTCAAATTCAAGAGATTGCAAGTAGAAAAACAGCATTGCTTTGTATGGTTCCTCGAGCACTGTCATTTGAACAATGTAATAAACTTCAACTTTCTAATAAATAACTAAACACAAGGCAGATGGGGCAGTTTCAATCAAAGTAGTTTAAGAAAAAAGCTTTTAGGTGTCGCAGTGGAACAGTTGATATCAGTGATGGCCGGTCTTGCGCTCGGACAATCTCAGGACACTGAGACATCCTTAGGAGTGCTTGTTCTACAGAATCCTGATGCATTCTGATTCAATTATGGAATTGGAGATCTGTGATCTCAAGCATATAATTAACAGACTAATTCAATGAGAAAAGATCCGTTCCTTACAAATTATCTGTTCAAACAGAATCTTGGGTCTCATTATATTGTTGTAAAATGGTGAAAGCTGCCTTCTTTTAGGACATCCATTGAGGGTCTTGTTCATGCATGAGTATTGGCTCTACTACTTAACTAGGCTACAGACAGAGATTAAAGATTCATTAAAAACTCTTACATGGCTTTTCATGCCGAGCTTGATCCTCTGGCAAGCAAGAACACTACTTCTGGAATGAAGTTCCAGCTACTGATATTCAATTCAAACAAGAACAGAAGAAACCATCTGCCTTCTCCACCAGATTGATATCAATTTTTTTTCGTTTTCCTTTCCAATGTTCAACATTCTGATGAACCAATTCTCTCAAAAATTAAAGCGGTTTGTTATTCCATAAATAATCCCAAACGCTGTAACGAAGCTTTGTTGAATAGATTACAAAAGCCACGAAGAAATTGCAAGAACTTCATCTTCATGGCTGTTTACATAACTACAACTACTCTTGAGGACTACTCCGGACTCTTCACTGAACATTGATATCTACAATTTTACTCGTTACAACAGCCTTCGGTATTGTTATGTACAAAACCCCATCTTTTACCTCTGCTTTGATCTGCTCAAATTGAACATTCTCAGGCAATGCAATTCTGCTACTGTATCTTCCATAGCTCTTAGCAGACCAATCTCCTTCTTTTTCTTCTTCTTCTCCTCCTACCTTCCCATTTTCTGAACTGGTCTTCTTCACCTTCTCAGCCTTCACAACCAGCATTTTCTCCTCCACCCACACCTTCACATCATCCTTCGTCATACCTGGCATGTCGAACCTCATCTTGTACTCATTTTCCCCTTCCTTGATCTCCCATGGAGTTCTTCCCCTGCTGTACCCCGCTCCATCGCTCGAAAATGGCGGTGACGGCCATGCCCCGGAGTAAGCAAATGGATCATCCATAATCCTCTCCATTGTTTCCATCATTTGCTGCACTGTTCTCGCCGTCGGAAATCGATCCCAAAGCCCTAGAAAAACAAACACGAGCGATTAACAAAATTCAACGAAAAGAAAAGGAATGGAAAACATTCCAACAAGTAGCAGCAAGGTTCGATTAATTACCAACAGGAGCAACAGGAGAGACTCGTTTCTTTGGTGGCTGAGTTGTTCGTTGTTCCTTCCTAGGAATTTTCTGCAGATGATCGAGATTGTCTCTGCCATCCCCCGCCATAGCTTTAATGCAACTTCTACGAGTAAATCCTTTAACCTTCTTCGGATCATTAGAGACTCTCCCAGGCGTGAAGGAGACGAATCGAGTCAGATTGGACACAGCTTGAGCCATTTAAGCGAAACCTCTGGATTATGAACGAATCTGTGGCTGTAAAGATAATTTGCAGCTTCGAAACGAGTTGGATCGAGTAGTAGGAATGAAGATTTCGTAGAATGCTTTGAGTGAAGAGAAATCTGCCATGATCGAGGTATAAAAGGAGGGAGGTGGAGTCTCTGGAGACGGAAGAAAGAACTGGAACCTCTCTTCTTCCTTCTAGATTCTCCTGGACCTTCCCTTCATTCTAGATTGCTCCACAAATCTGAGCCGTG

Coding sequence (CDS)

ATGTTCTCGAGAGATTACGGTGGATTTTGCATTCAAATGAGATTACAATACAGCCCATTTGCTCTCTTTTTTCTTCATTGGATTGAATGGATGGATTTCAGTTGCACAGATCCTCTTCCAAGTTTCTTGGGCCTTTTCCACATACTCTTGTACAAGGTGTACGTCGATGGACACCAACCGTTGGCGTCACCACGAGAAAGAAAAGCCACCCTCAAGGAGTTCTATGCTGTAATATACCCTTCACTTAGGCAACTTCGAAGTGGGCACCTCAAGTCGAAAGAAGAGACTTCTTCTAGGAAGAGAATAGAAGAACAAAAGGGGCCGTCTAATGAGGATCTTCAGAGGGATGAGGAGTGTGGGATATGCATGGAAAACTGCAGAGATGTTGTGTTGCCAAATTGTGGCCATTCGATGTGCCTCAGCTGCTTTCAGGACTGGAGTCCGAGGTCGCGTTCCTGTCCCTTCTGCCGCAACTGTCTAAATAGGTTGAGCGCCAGGGACCTGTGGGTTCTTACAAGCGACACCGACATTGTCGACTCGGAAACTCTTACCAAGGAAAATCTAATACATTTCTACCTTTATATAGAAAACCTGCCACTGTTTCAACCAGACGTGAGTATTTTAATACCAGATTACATGTTGTGA

Protein sequence

MFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQPLASPRERKATLKEFYAVIYPSLRQLRSGHLKSKEETSSRKRIEEQKGPSNEDLQRDEECGICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWVLTSDTDIVDSETLTKENLIHFYLYIENLPLFQPDVSILIPDYML
Homology
[Close]
BLAST of Cp4.1LG01g15820 vs. Swiss-Prot
Match: RN141_RAT (RING finger protein 141 OS=Rattus norvegicus GN=Rnf141 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.9e-08
Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 1 

Query: 111 EDLQRDEECGICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWV 170
           + L  +EEC ICM+   D++LP C HS C  C   WS R R+CP CR  L    A + WV
Sbjct: 147 KQLTDEEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWV 205

Query: 171 LT 173
           ++
Sbjct: 207 VS 205

[Close]
BLAST of Cp4.1LG01g15820 vs. Swiss-Prot
Match: RN141_BOVIN (RING finger protein 141 OS=Bos taurus GN=RNF141 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.9e-08
Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 1 

Query: 111 EDLQRDEECGICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWV 170
           + L  +EEC ICM+   D++LP C HS C  C   WS R R+CP CR  L    A + WV
Sbjct: 147 KQLTDEEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWV 205

Query: 171 LT 173
           ++
Sbjct: 207 VS 205

[Close]
BLAST of Cp4.1LG01g15820 vs. Swiss-Prot
Match: RN141_PONAB (RING finger protein 141 OS=Pongo abelii GN=RNF141 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.9e-08
Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 1 

Query: 111 EDLQRDEECGICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWV 170
           + L  +EEC ICM+   D++LP C HS C  C   WS R R+CP CR  L    A + WV
Sbjct: 147 KQLTDEEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWV 205

Query: 171 LT 173
           ++
Sbjct: 207 VS 205

[Close]
BLAST of Cp4.1LG01g15820 vs. Swiss-Prot
Match: RN141_MOUSE (RING finger protein 141 OS=Mus musculus GN=Rnf141 PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 5.9e-08
Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 1 

Query: 111 EDLQRDEECGICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWV 170
           + L  +EEC ICM+   D++LP C HS C  C   WS R R+CP CR  L    A + WV
Sbjct: 147 KQLTDEEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWV 205

Query: 171 LT 173
           ++
Sbjct: 207 VS 205

[Close]
BLAST of Cp4.1LG01g15820 vs. Swiss-Prot
Match: RN141_HUMAN (RING finger protein 141 OS=Homo sapiens GN=RNF141 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.9e-08
Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 1 

Query: 111 EDLQRDEECGICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWV 170
           + L  +EEC ICM+   D++LP C HS C  C   WS R R+CP CR  L    A + WV
Sbjct: 147 KQLTDEEECCICMDGRADLILP-CAHSFCQKCIDKWSDRHRNCPICR--LQMTGANESWV 205

Query: 171 LT 173
           ++
Sbjct: 207 VS 205

[Close]
BLAST of Cp4.1LG01g15820 vs. TrEMBL
Match: A0A0A0KQ18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G591730 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.3e-102
Identity = 177/214 (82.71%), Postives = 196/214 (91.59%), Query Frame = 1 

Query: 1   MFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQP 60
           M  R+YGGFCIQMRL YSPFA F LHWIEWMDF+CTDP+PSFLGLFHILLYKVYVDG +P
Sbjct: 1   MLPREYGGFCIQMRLHYSPFAPFLLHWIEWMDFNCTDPVPSFLGLFHILLYKVYVDG-KP 60

Query: 61  LASPRERKATLKEFYAVIYPSLRQLRSGHLKSKEETSSRKRIEEQKGPSNEDLQRDEECG 120
           L SPRERK TLKEFYAVIYPSLRQL+SG ++SKEETSSRK  E+++  SNEDLQRDEECG
Sbjct: 61  LVSPRERKTTLKEFYAVIYPSLRQLQSGRVESKEETSSRKITEDEQKLSNEDLQRDEECG 120

Query: 121 ICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWVLTSDTDIVDS 180
           ICMENCRDVVLPNCGHSMCLSCF+DW+ RSRSCPFCRNCLNRLS RDLW+LTSDT+I+DS
Sbjct: 121 ICMENCRDVVLPNCGHSMCLSCFKDWNARSRSCPFCRNCLNRLSTRDLWILTSDTEIIDS 180

Query: 181 ETLTKENLIHFYLYIENLPLFQPDVSILIPDYML 215
           ETL KENL+HFYLY E+LPLFQPD++I IPDYML
Sbjct: 181 ETLAKENLLHFYLYTESLPLFQPDMNIFIPDYML 213

[Close]
BLAST of Cp4.1LG01g15820 vs. TrEMBL
Match: V4VFV0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032536mg PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.6e-71
Identity = 135/219 (61.64%), Postives = 165/219 (75.34%), Query Frame = 1 

Query: 4   RDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQPLAS 63
           RDYGG  +QMRL YSPFA   L  IEWMD+SCTD +PS+LGL +IL+YKVYVDG  P  S
Sbjct: 34  RDYGGDFVQMRLSYSPFAPLVLFMIEWMDYSCTDTVPSYLGLLNILVYKVYVDG-MPALS 93

Query: 64  PRERKATLKEFYAVIYPSLRQLRSGHLKSKE--------ETSSRKRIEEQKGPSNEDLQR 123
            +ERKATL+EFYA+IYPSLRQL S   + ++        E SSRKR+EE++  S++DL R
Sbjct: 94  SKERKATLREFYAIIYPSLRQLESEFSELEDNSKRDQCSEISSRKRVEERRKLSDKDLDR 153

Query: 124 DEECGICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWVLTSDT 183
           ++ECGICMENC  +VLPNCGHS+C++CF DW+ RS+SCPFCR  L R+S+ DLWVL SD 
Sbjct: 154 NDECGICMENCTKMVLPNCGHSLCVNCFHDWNARSQSCPFCRGSLQRVSSADLWVLISDI 213

Query: 184 DIVDSETLTKENLIHFYLYIENLPLFQPDVSILIPDYML 215
           DI+D  T+ KENL  FYLYIENLPL  PD    + DYML
Sbjct: 214 DIIDMVTIAKENLRRFYLYIENLPLIVPDTHPFVYDYML 251

[Close]
BLAST of Cp4.1LG01g15820 vs. TrEMBL
Match: A0A061EEU1_THECC (RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_010696 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.0e-70
Identity = 132/218 (60.55%), Postives = 162/218 (74.31%), Query Frame = 1 

Query: 4   RDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQPLAS 63
           RDYGG C QMRL YSPFA F L  IEWMD+SCT+ LPS+LGLFHIL++K YVDG  P  S
Sbjct: 34  RDYGGNCYQMRLSYSPFAPFILFLIEWMDYSCTNSLPSYLGLFHILVFKAYVDGI-PALS 93

Query: 64  PRERKATLKEFYAVIYPSLRQLRSGHLKSKE-------ETSSRKRIEEQKGPSNEDLQRD 123
            +ERKAT +EFYAVIYP LRQL    +K ++       E  SRKR+E++K  SN+DL+RD
Sbjct: 94  SKERKATQREFYAVIYPLLRQLGDEFIKLEDNKKNGCTEVLSRKRVEDRKRVSNKDLERD 153

Query: 124 EECGICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWVLTSDTD 183
           +ECGICMENC  +VLPNCGH++C+SCF DW+ RS+SCPFCR  L R+S++DLWVLTS  D
Sbjct: 154 DECGICMENCTKMVLPNCGHALCISCFHDWNVRSQSCPFCRGSLKRVSSKDLWVLTSGND 213

Query: 184 IVDSETLTKENLIHFYLYIENLPLFQPDVSILIPDYML 215
           I+D  TL KENL   YLY+E LP   P+    + DYM+
Sbjct: 214 IIDMVTLAKENLRRLYLYMEKLPFVMPETHHYVSDYMI 250

[Close]
BLAST of Cp4.1LG01g15820 vs. TrEMBL
Match: A0A0B0NDR7_GOSAR (RING finger protein OS=Gossypium arboreum GN=F383_19099 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 8.4e-70
Identity = 127/218 (58.26%), Postives = 163/218 (74.77%), Query Frame = 1 

Query: 4   RDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQPLAS 63
           RDYGG C QMRL YSPFA F L  IEWMD+SCTD LPS+LGL HIL+YK YVDG  P+ S
Sbjct: 34  RDYGGNCYQMRLSYSPFAPFILFLIEWMDYSCTDTLPSYLGLLHILVYKAYVDG-MPVLS 93

Query: 64  PRERKATLKEFYAVIYPSLRQLRSGHLKSKE-------ETSSRKRIEEQKGPSNEDLQRD 123
            +++KATL+EFYAVIYP LRQL    ++S++       E SSRK++E+ K   ++D +RD
Sbjct: 94  SKDKKATLREFYAVIYPLLRQLGDEFIESEDNKKGRCMEVSSRKKLEDHKRIPDKDSERD 153

Query: 124 EECGICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWVLTSDTD 183
           +ECGICMENC  +VLPNCGH++C++CF +W+ RS+SCPFCR  L R+S++DLWVLTS  D
Sbjct: 154 DECGICMENCTKMVLPNCGHALCINCFHEWNRRSQSCPFCRGSLKRVSSKDLWVLTSCND 213

Query: 184 IVDSETLTKENLIHFYLYIENLPLFQPDVSILIPDYML 215
           ++D  TL KENL   Y+YIE LPL  P+    + DYM+
Sbjct: 214 VIDMVTLAKENLCRLYIYIEKLPLVMPETQPYVSDYMI 250

[Close]
BLAST of Cp4.1LG01g15820 vs. TrEMBL
Match: W9RMU6_9ROSA (E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_027615 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.4e-69
Identity = 135/220 (61.36%), Postives = 161/220 (73.18%), Query Frame = 1 

Query: 4   RDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQPLAS 63
           RDY G C+QMRL YSP A  FL+ IEWMD+SCTD LPS+LGL HIL+YKVYVDG    +S
Sbjct: 34  RDYNGDCVQMRLSYSPLAPLFLYLIEWMDYSCTDSLPSYLGLLHILIYKVYVDGIPSASS 93

Query: 64  PRERKATLKEFYAVIYPSLRQLRSGHLK--------SKEETSSRKRIEEQKGPSNEDLQR 123
            +ERKA+L+EFYAVIYPSLRQLR   ++           E  S KR E ++  S++DL+R
Sbjct: 94  SKERKASLREFYAVIYPSLRQLRGEFIELDGDDTRNQYTEVLSGKREESRRVVSDKDLER 153

Query: 124 DEECGICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWVLTSDT 183
           D+ECGICMEN   +VLPNCGHSMC+ CF DW+ RS SCPFCR  L R+S+ DLWVLTS+ 
Sbjct: 154 DDECGICMENGTMMVLPNCGHSMCICCFHDWNARSESCPFCRGSLKRVSSTDLWVLTSNN 213

Query: 184 DIVDSETLTKENLIHFYLYIENLPLFQ-PDVSILIPDYML 215
           D+VD  TL KENL  FY YIENLP F  PD  +L+ DYML
Sbjct: 214 DVVDPVTLAKENLRRFYRYIENLPSFVIPDTHVLLFDYML 253

[Close]
BLAST of Cp4.1LG01g15820 vs. TAIR10
Match: AT1G24440.1 (AT1G24440.1 RING/U-box superfamily protein)

HSP 1 Score: 188.0 bits (476), Expect = 6.2e-48
Identity = 95/212 (44.81%), Postives = 135/212 (63.68%), Query Frame = 1 

Query: 8   GFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQPLASPRER 67
           G  +QM+L  S  A FF+  ++WMDFSC   LP +   FHIL+YKV  DG     S   R
Sbjct: 37  GVRLQMKLVCSNLAPFFIFLLQWMDFSCL--LPRYFDFFHILIYKVRADGRWN-RSRYGR 96

Query: 68  KATLKEFYAVIYPSLRQLRSGHLKSKEE----------TSSRKRIEEQKGPSNEDLQRDE 127
           KAT++EFY VI PSL +L        +E          T  +  IE  +  ++ DL+R++
Sbjct: 97  KATIREFYGVILPSLERLHINFADLPDESLWYPNPKAITKKQYDIEGSRYMNSIDLERED 156

Query: 128 ECGICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWVLTSDTDI 187
           ECGIC+E C  +VLPNC H+MC+ C+++W+ +S SCPFCR  + R+++ DLWVLT D D+
Sbjct: 157 ECGICLEPCTKMVLPNCCHAMCIKCYRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDV 216

Query: 188 VDSETLTKENLIHFYLYIENLPLFQPDVSILI 210
           VD ET+TKE+L+ FYL+I +LP   P+ + L+
Sbjct: 217 VDPETVTKEDLLRFYLHINSLPKDYPEAAFLV 245

[Close]
BLAST of Cp4.1LG01g15820 vs. TAIR10
Match: AT1G13195.1 (AT1G13195.1 RING/U-box superfamily protein)

HSP 1 Score: 185.3 bits (469), Expect = 4.0e-47
Identity = 94/209 (44.98%), Postives = 135/209 (64.59%), Query Frame = 1 

Query: 11  IQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQPLASPRERKAT 70
           +QM+L +S FA   L  + W+D S +  +P +L LFH+L+YKV  DG QP  +   RKAT
Sbjct: 46  LQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDG-QPKLTTHGRKAT 105

Query: 71  LKEFYAVIYPSLRQLRSGHLKSKEETS--------SRKRIEEQKGP--SNEDLQRDEECG 130
           + EFY VI PSL+ L S +L   E T         S+K  +E +    SN  L+R+EECG
Sbjct: 106 ISEFYGVILPSLQLLHS-NLDELETTDIGFDLKRLSKKITKEARSSRFSNAGLEREEECG 165

Query: 131 ICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWVLTSDTDIVDS 190
           IC+E C  +VLPNC HSMC+ C+++W+ +S+SCPFCR  + R+++ DLWVL  D D+VD+
Sbjct: 166 ICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDT 225

Query: 191 ETLTKENLIHFYLYIENLPLFQPDVSILI 210
            T ++E+L  FYLYI +LP   P+   ++
Sbjct: 226 RTASREDLFRFYLYINSLPKDYPEALFVV 252

[Close]
BLAST of Cp4.1LG01g15820 vs. TAIR10
Match: AT5G58787.1 (AT5G58787.1 RING/U-box superfamily protein)

HSP 1 Score: 178.3 bits (451), Expect = 4.9e-45
Identity = 93/208 (44.71%), Postives = 126/208 (60.58%), Query Frame = 1 

Query: 2   FSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQPL 61
           + R+  G  +QMRL YSP A FFL  ++W D      L  FLGL  +L+Y  Y DG   +
Sbjct: 27  YPREKDGARVQMRLSYSPTAQFFLFLVQWTDCK----LAGFLGLLRVLIYMTYADGKTTM 86

Query: 62  ASPRERKATLKEFYAVIYPSLRQLRSG-----HLKSKEETSSRKRIEEQKGPSNEDLQRD 121
            S  ERKA+++EF AVI PSL QL+ G       K KE    R R +++   S  +++R+
Sbjct: 87  -SVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEVCKMRYRKKDESEMSEIEIERE 146

Query: 122 EECGICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWVLTSDTD 181
           EECGICME    VVLPNC HS+C+ C++DW  RS+SCPFCR+ L R+ + DLW+     D
Sbjct: 147 EECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFCRDSLKRVDSGDLWMFLDQND 206

Query: 182 IVDSETLTKENLIHFYLYIENLPLFQPD 205
            V+   + +EN    ++YIE LPL  PD
Sbjct: 207 TVNLTAIARENQKRLFMYIEKLPLVVPD 229

[Close]
BLAST of Cp4.1LG01g15820 vs. TAIR10
Match: AT5G01520.1 (AT5G01520.1 RING/U-box superfamily protein)

HSP 1 Score: 174.1 bits (440), Expect = 9.3e-44
Identity = 94/215 (43.72%), Postives = 129/215 (60.00%), Query Frame = 1 

Query: 2   FSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQPL 61
           +  +Y G  +QMRL YSP A  FL  ++W D          LGL  IL+YK YVDG   +
Sbjct: 26  YPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH----FAGALGLLRILIYKAYVDGKTTM 85

Query: 62  ASPRERKATLKEFYAVIYPSLRQLRSG-----HLKSKE--ETSSRKRIEEQKGPSNE-DL 121
            S  ERK +++EFY V++PSL QL  G       K KE  +   RK+    KG  +E DL
Sbjct: 86  -SLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKRYRKKDRTDKGKMSEIDL 145

Query: 122 QRDEECGICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWVLTS 181
           +R+EECGIC+E    VVLP C HSMC++C+++W  RS+SCPFCR  L R+++ DLW+ T 
Sbjct: 146 EREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFCRGSLKRVNSGDLWIYTC 205

Query: 182 DTDIVDSETLTKENLIHFYLYIENLPLFQPDVSIL 209
             +I D   + KENL    +YI+ LPL   D +++
Sbjct: 206 SAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLV 235

[Close]
BLAST of Cp4.1LG01g15820 vs. TAIR10
Match: AT3G47160.2 (AT3G47160.2 RING/U-box superfamily protein)

HSP 1 Score: 171.8 bits (434), Expect = 4.6e-43
Identity = 93/211 (44.08%), Postives = 127/211 (60.19%), Query Frame = 1 

Query: 2   FSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQPL 61
           + R+  G  +QMRL Y+P A F L  ++W D      L   LGL  +L+Y  Y DG   +
Sbjct: 39  YPREKDGARVQMRLSYTPAAQFLLFLVQWTDCH----LAGTLGLLRVLIYMTYADGKTTM 98

Query: 62  ASPRERKATLKEFYAVIYPSLRQLRSG-----HLKSKEETSSRKRIEEQKGP---SNEDL 121
            S  ERK ++K+FYAVI+PSL QL  G       K KE    R R +++      S  D+
Sbjct: 99  -SVYERKTSIKDFYAVIFPSLLQLERGITDLDDRKQKEVCKIRYRNKDETEKVKLSEIDI 158

Query: 122 QRDEECGICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWVLTS 181
           +R+EECGICME    VVLPNC HS+C+ C++DW  RS SCPFCR+ L R+++ DLW+L  
Sbjct: 159 EREEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGRSESCPFCRDSLKRVNSGDLWMLME 218

Query: 182 DTDIVDSETLTKENLIHFYLYIENLPLFQPD 205
            +D V+  T+ +EN    ++YIE LPL  PD
Sbjct: 219 KSDTVNMYTIERENKKRLFVYIEKLPLVVPD 244

[Close]
BLAST of Cp4.1LG01g15820 vs. NCBI nr
Match: gi|449435031|ref|XP_004135299.1| (PREDICTED: peroxisome biogenesis factor 10-like isoform X1 [Cucumis sativus])

HSP 1 Score: 380.6 bits (976), Expect = 1.9e-102
Identity = 177/214 (82.71%), Postives = 196/214 (91.59%), Query Frame = 1 

Query: 1   MFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQP 60
           M  R+YGGFCIQMRL YSPFA F LHWIEWMDF+CTDP+PSFLGLFHILLYKVYVDG +P
Sbjct: 31  MLPREYGGFCIQMRLHYSPFAPFLLHWIEWMDFNCTDPVPSFLGLFHILLYKVYVDG-KP 90

Query: 61  LASPRERKATLKEFYAVIYPSLRQLRSGHLKSKEETSSRKRIEEQKGPSNEDLQRDEECG 120
           L SPRERK TLKEFYAVIYPSLRQL+SG ++SKEETSSRK  E+++  SNEDLQRDEECG
Sbjct: 91  LVSPRERKTTLKEFYAVIYPSLRQLQSGRVESKEETSSRKITEDEQKLSNEDLQRDEECG 150

Query: 121 ICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWVLTSDTDIVDS 180
           ICMENCRDVVLPNCGHSMCLSCF+DW+ RSRSCPFCRNCLNRLS RDLW+LTSDT+I+DS
Sbjct: 151 ICMENCRDVVLPNCGHSMCLSCFKDWNARSRSCPFCRNCLNRLSTRDLWILTSDTEIIDS 210

Query: 181 ETLTKENLIHFYLYIENLPLFQPDVSILIPDYML 215
           ETL KENL+HFYLY E+LPLFQPD++I IPDYML
Sbjct: 211 ETLAKENLLHFYLYTESLPLFQPDMNIFIPDYML 243

[Close]
BLAST of Cp4.1LG01g15820 vs. NCBI nr
Match: gi|778704758|ref|XP_011655587.1| (PREDICTED: E3 ubiquitin-protein ligase RNF8-like isoform X2 [Cucumis sativus])

HSP 1 Score: 380.6 bits (976), Expect = 1.9e-102
Identity = 177/214 (82.71%), Postives = 196/214 (91.59%), Query Frame = 1 

Query: 1   MFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQP 60
           M  R+YGGFCIQMRL YSPFA F LHWIEWMDF+CTDP+PSFLGLFHILLYKVYVDG +P
Sbjct: 1   MLPREYGGFCIQMRLHYSPFAPFLLHWIEWMDFNCTDPVPSFLGLFHILLYKVYVDG-KP 60

Query: 61  LASPRERKATLKEFYAVIYPSLRQLRSGHLKSKEETSSRKRIEEQKGPSNEDLQRDEECG 120
           L SPRERK TLKEFYAVIYPSLRQL+SG ++SKEETSSRK  E+++  SNEDLQRDEECG
Sbjct: 61  LVSPRERKTTLKEFYAVIYPSLRQLQSGRVESKEETSSRKITEDEQKLSNEDLQRDEECG 120

Query: 121 ICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWVLTSDTDIVDS 180
           ICMENCRDVVLPNCGHSMCLSCF+DW+ RSRSCPFCRNCLNRLS RDLW+LTSDT+I+DS
Sbjct: 121 ICMENCRDVVLPNCGHSMCLSCFKDWNARSRSCPFCRNCLNRLSTRDLWILTSDTEIIDS 180

Query: 181 ETLTKENLIHFYLYIENLPLFQPDVSILIPDYML 215
           ETL KENL+HFYLY E+LPLFQPD++I IPDYML
Sbjct: 181 ETLAKENLLHFYLYTESLPLFQPDMNIFIPDYML 213

[Close]
BLAST of Cp4.1LG01g15820 vs. NCBI nr
Match: gi|659090610|ref|XP_008446106.1| (PREDICTED: peroxisome biogenesis factor 10-like isoform X2 [Cucumis melo])

HSP 1 Score: 379.4 bits (973), Expect = 4.1e-102
Identity = 177/214 (82.71%), Postives = 195/214 (91.12%), Query Frame = 1 

Query: 1   MFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQP 60
           M  R+YGGFCIQMRL YSPFA F LHWIEWMDF+CTDP+PSFLGLFHILLYKVYVDG +P
Sbjct: 31  MLPREYGGFCIQMRLHYSPFAPFLLHWIEWMDFNCTDPVPSFLGLFHILLYKVYVDG-KP 90

Query: 61  LASPRERKATLKEFYAVIYPSLRQLRSGHLKSKEETSSRKRIEEQKGPSNEDLQRDEECG 120
           L SPRERKATLKEFYAVIYPSLRQL+SG + SKEETS RK  E+++  SNEDLQRDEECG
Sbjct: 91  LVSPRERKATLKEFYAVIYPSLRQLQSGRVDSKEETSPRKITEDEQKLSNEDLQRDEECG 150

Query: 121 ICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWVLTSDTDIVDS 180
           ICMENCRDVVLPNCGHSMCL+CF+DWS RSRSCPFCRNCLNRLS RDLW+LTSDT+I+DS
Sbjct: 151 ICMENCRDVVLPNCGHSMCLNCFKDWSARSRSCPFCRNCLNRLSTRDLWILTSDTEIIDS 210

Query: 181 ETLTKENLIHFYLYIENLPLFQPDVSILIPDYML 215
           ETL KENL+HFYLY E+LPLFQPD++I IPDYML
Sbjct: 211 ETLAKENLLHFYLYTESLPLFQPDMNIFIPDYML 243

[Close]
BLAST of Cp4.1LG01g15820 vs. NCBI nr
Match: gi|659090614|ref|XP_008446108.1| (PREDICTED: peroxisome biogenesis factor 10-like isoform X4 [Cucumis melo])

HSP 1 Score: 379.4 bits (973), Expect = 4.1e-102
Identity = 177/214 (82.71%), Postives = 195/214 (91.12%), Query Frame = 1 

Query: 1   MFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQP 60
           M  R+YGGFCIQMRL YSPFA F LHWIEWMDF+CTDP+PSFLGLFHILLYKVYVDG +P
Sbjct: 1   MLPREYGGFCIQMRLHYSPFAPFLLHWIEWMDFNCTDPVPSFLGLFHILLYKVYVDG-KP 60

Query: 61  LASPRERKATLKEFYAVIYPSLRQLRSGHLKSKEETSSRKRIEEQKGPSNEDLQRDEECG 120
           L SPRERKATLKEFYAVIYPSLRQL+SG + SKEETS RK  E+++  SNEDLQRDEECG
Sbjct: 61  LVSPRERKATLKEFYAVIYPSLRQLQSGRVDSKEETSPRKITEDEQKLSNEDLQRDEECG 120

Query: 121 ICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSCPFCRNCLNRLSARDLWVLTSDTDIVDS 180
           ICMENCRDVVLPNCGHSMCL+CF+DWS RSRSCPFCRNCLNRLS RDLW+LTSDT+I+DS
Sbjct: 121 ICMENCRDVVLPNCGHSMCLNCFKDWSARSRSCPFCRNCLNRLSTRDLWILTSDTEIIDS 180

Query: 181 ETLTKENLIHFYLYIENLPLFQPDVSILIPDYML 215
           ETL KENL+HFYLY E+LPLFQPD++I IPDYML
Sbjct: 181 ETLAKENLLHFYLYTESLPLFQPDMNIFIPDYML 213

[Close]
BLAST of Cp4.1LG01g15820 vs. NCBI nr
Match: gi|659090612|ref|XP_008446107.1| (PREDICTED: uncharacterized protein LOC103488931 isoform X3 [Cucumis melo])

HSP 1 Score: 364.8 bits (935), Expect = 1.1e-97
Identity = 177/241 (73.44%), Postives = 195/241 (80.91%), Query Frame = 1 

Query: 1   MFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVYVDGHQP 60
           M  R+YGGFCIQMRL YSPFA F LHWIEWMDF+CTDP+PSFLGLFHILLYKVYVDG +P
Sbjct: 1   MLPREYGGFCIQMRLHYSPFAPFLLHWIEWMDFNCTDPVPSFLGLFHILLYKVYVDG-KP 60

Query: 61  LASPRERKATLKEFY---------------------------AVIYPSLRQLRSGHLKSK 120
           L SPRERKATLKEFY                           AVIYPSLRQL+SG + SK
Sbjct: 61  LVSPRERKATLKEFYGPYFSPNFFFSRIEQIGSKLFTIETMAAVIYPSLRQLQSGRVDSK 120

Query: 121 EETSSRKRIEEQKGPSNEDLQRDEECGICMENCRDVVLPNCGHSMCLSCFQDWSPRSRSC 180
           EETS RK  E+++  SNEDLQRDEECGICMENCRDVVLPNCGHSMCL+CF+DWS RSRSC
Sbjct: 121 EETSPRKITEDEQKLSNEDLQRDEECGICMENCRDVVLPNCGHSMCLNCFKDWSARSRSC 180

Query: 181 PFCRNCLNRLSARDLWVLTSDTDIVDSETLTKENLIHFYLYIENLPLFQPDVSILIPDYM 215
           PFCRNCLNRLS RDLW+LTSDT+I+DSETL KENL+HFYLY E+LPLFQPD++I IPDYM
Sbjct: 181 PFCRNCLNRLSTRDLWILTSDTEIIDSETLAKENLLHFYLYTESLPLFQPDMNIFIPDYM 240

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g15820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RN141_RAT5.9e-0843.55RING finger protein 141 OS=Rattus norvegicus GN=Rnf141 PE=2 SV=1[more]
RN141_BOVIN5.9e-0843.55RING finger protein 141 OS=Bos taurus GN=RNF141 PE=2 SV=1[more]
RN141_PONAB5.9e-0843.55RING finger protein 141 OS=Pongo abelii GN=RNF141 PE=2 SV=1[more]
RN141_MOUSE5.9e-0843.55RING finger protein 141 OS=Mus musculus GN=Rnf141 PE=1 SV=2[more]
RN141_HUMAN5.9e-0843.55RING finger protein 141 OS=Homo sapiens GN=RNF141 PE=1 SV=1[more]
BLAST of Cp4.1LG01g15820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQ18_CUCSA1.3e-10282.71Uncharacterized protein OS=Cucumis sativus GN=Csa_5G591730 PE=4 SV=1[more]
V4VFV0_9ROSI2.6e-7161.64Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032536mg PE=4 SV=1[more]
A0A061EEU1_THECC1.0e-7060.55RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_010696 PE=4 SV=1[more]
A0A0B0NDR7_GOSAR8.4e-7058.26RING finger protein OS=Gossypium arboreum GN=F383_19099 PE=4 SV=1[more]
W9RMU6_9ROSA1.4e-6961.36E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_027615 PE=4 SV=1[more]
BLAST of Cp4.1LG01g15820 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G24440.16.2e-4844.81 RING/U-box superfamily protein[more]
AT1G13195.14.0e-4744.98 RING/U-box superfamily protein[more]
AT5G58787.14.9e-4544.71 RING/U-box superfamily protein[more]
AT5G01520.19.3e-4443.72 RING/U-box superfamily protein[more]
AT3G47160.24.6e-4344.08 RING/U-box superfamily protein[more]
BLAST of Cp4.1LG01g15820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435031|ref|XP_004135299.1|1.9e-10282.71PREDICTED: peroxisome biogenesis factor 10-like isoform X1 [Cucumis sativus][more]
gi|778704758|ref|XP_011655587.1|1.9e-10282.71PREDICTED: E3 ubiquitin-protein ligase RNF8-like isoform X2 [Cucumis sativus][more]
gi|659090610|ref|XP_008446106.1|4.1e-10282.71PREDICTED: peroxisome biogenesis factor 10-like isoform X2 [Cucumis melo][more]
gi|659090614|ref|XP_008446108.1|4.1e-10282.71PREDICTED: peroxisome biogenesis factor 10-like isoform X4 [Cucumis melo][more]
gi|659090612|ref|XP_008446107.1|1.1e-9773.44PREDICTED: uncharacterized protein LOC103488931 isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
IPR001594Palmitoyltrfase_DHHC
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g15820.1Cp4.1LG01g15820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001594Zinc finger, DHHC-type, palmitoyltransferasePROFILEPS50216ZF_DHHCcoord: 137..170
score: 8
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 119..156
score: 3.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 119..157
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 102..161
score: 3.5
NoneNo IPR availablePANTHERPTHR15315RING FINGER PROTEIN 41, 151coord: 7..214
score: 4.5E
NoneNo IPR availablePANTHERPTHR15315:SF22SUBFAMILY NOT NAMEDcoord: 7..214
score: 4.5E
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 116..158
score: 6.
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 110..161
score: 9.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g15820Cucsa.075380Cucumber (Gy14) v1cgycpeB0123
Cp4.1LG01g15820CmaCh04G018070Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g15820Cla009997Watermelon (97103) v1cpewmB428
Cp4.1LG01g15820Csa5G591730Cucumber (Chinese Long) v2cpecuB440
Cp4.1LG01g15820ClCG05G026220Watermelon (Charleston Gray)cpewcgB389
Cp4.1LG01g15820CSPI05G21750Wild cucumber (PI 183967)cpecpiB440
Cp4.1LG01g15820Lsi04G006430Bottle gourd (USVL1VR-Ls)cpelsiB353
Cp4.1LG01g15820CsaV3_5G030620Cucumber (Chinese Long) v3cpecucB0544
Cp4.1LG01g15820CsGy5G021260Cucumber (Gy14) v2cgybcpeB649
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g15820Bottle gourd (USVL1VR-Ls)cpelsiB383
Cp4.1LG01g15820Watermelon (Charleston Gray)cpewcgB418
Cp4.1LG01g15820Watermelon (97103) v1cpewmB397
Cp4.1LG01g15820Melon (DHL92) v3.5.1cpemeB364
Cp4.1LG01g15820Melon (DHL92) v3.5.1cpemeB402
Cp4.1LG01g15820Cucumber (Gy14) v2cgybcpeB210
Cp4.1LG01g15820Melon (DHL92) v3.6.1cpemedB424
Cp4.1LG01g15820Melon (DHL92) v3.6.1cpemedB467
Cp4.1LG01g15820Silver-seed gourdcarcpeB0344
Cp4.1LG01g15820Silver-seed gourdcarcpeB0710
Cp4.1LG01g15820Silver-seed gourdcarcpeB0888
Cp4.1LG01g15820Silver-seed gourdcarcpeB0971
Cp4.1LG01g15820Cucumber (Chinese Long) v3cpecucB0478
Cp4.1LG01g15820Wax gourdcpewgoB0536
Cp4.1LG01g15820Wax gourdcpewgoB0555
Cp4.1LG01g15820Cucurbita pepo (Zucchini)cpecpeB033
Cp4.1LG01g15820Cucurbita pepo (Zucchini)cpecpeB116
Cp4.1LG01g15820Cucurbita pepo (Zucchini)cpecpeB406
Cp4.1LG01g15820Cucumber (Gy14) v1cgycpeB1041
Cp4.1LG01g15820Cucurbita maxima (Rimu)cmacpeB186
Cp4.1LG01g15820Cucurbita maxima (Rimu)cmacpeB431
Cp4.1LG01g15820Cucurbita maxima (Rimu)cmacpeB776
Cp4.1LG01g15820Cucurbita moschata (Rifu)cmocpeB162
Cp4.1LG01g15820Cucurbita moschata (Rifu)cmocpeB397
Cp4.1LG01g15820Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g15820Cucurbita moschata (Rifu)cmocpeB731
Cp4.1LG01g15820Wild cucumber (PI 183967)cpecpiB383
Cp4.1LG01g15820Cucumber (Chinese Long) v2cpecuB384