Cp4.1LG01g15200 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g15200
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPlant/F4N2-9 protein, putative
LocationCp4.1LG01 : 9055806 .. 9056952 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCGTTACCAGCCAACTCTCCTGCAAGCCAAATAAGATCTTCAACAAATCACTTCACCGGCGGAAAGATTCCGGCGAGCTCGACGTCTTCGAAGCCGCCCGCTACTTCTCCGGCTACAATGAGCTCCATTACAACGCCGCCGCCGCCGCCAGCTACGACACTTCCTTATTTTCTCAGAAGATCTTCAGAGAGGATGACGGCGGCTGGAGAGGCGGCAGAATGAGCCTCGACTTACCGATAAGAACCAACATAGTCCCTCTCCCGCAGCCGGAAAAACAAACAACCAAAGACCAAAAAAAACACCGGCAACAACCCAGCTCCCCCGGCGGCCGCCTCGCCAATTTCCTCAATTCCCTCTTCAACCAATCAGCTTCGAAAAAGAAAAAAAAACCCAAAAACCTCATAAAATCCGAAGATCTCCACGAAAATGGGGCAAGAAAGAGAAGAAGCAGCTTAAGTACGTTGATTGATTCAAAATCATCCTCAATTTATTCATCTTCCAACATTTCTGGATTCAGAACTCCACCAGCTCCCAATTGTACTGTACAAACACCCAACAAAAACTACAAGGAAATCAGAAGCCTTTTGGATCAAAAACGAACATCCTCCAAGAATCTCGGAAGTGGATATCATAAACAAAATCAATACGACATCAGAAAAATGAACGGCGTCGATGAAGGAGCTGAAAGTGATTCAAGCTCTGATCTTTTTGAGCTAAGGATCTGTGATTCAGATTGCGGCCTGCCAGTCTACGAATCCACAAACATTCAGACCATTAACAGACCAGATTTCATCCAATCTTATCCATCTATGNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATTGGAAAGTTTGTCCCCTTCTTTTTCTTTAATGTCCAGCATGCTAATTAGATTTCCATTGCCATGTTTAATGATTTTGTCACTAGATTGTCACCAAACAAGAACACATCATAGCCATTTATTATTATTATTATTATTTTAACTTTTGGGGCACATTCATTAATGATATTTAATGATTTGATCCTAAGGTTTTGGATTAATTAATGAAATTAGTGGTGGCTAATCAAGCAAGGTTAAGCATGTGTGAGATGCATGGCATGGATTAG

mRNA sequence

ATGTCCGTTACCAGCCAACTCTCCTGCAAGCCAAATAAGATCTTCAACAAATCACTTCACCGGCGGAAAGATTCCGGCGAGCTCGACGTCTTCGAAGCCGCCCGCTACTTCTCCGGCTACAATGAGCTCCATTACAACGCCGCCGCCGCCGCCAGCTACGACACTTCCTTATTTTCTCAGAAGATCTTCAGAGAGGATGACGGCGGCTGGAGAGGCGGCAGAATGAGCCTCGACTTACCGATAAGAACCAACATAGTCCCTCTCCCGCAGCCGGAAAAACAAACAACCAAAGACCAAAAAAAACACCGGCAACAACCCAGCTCCCCCGGCGGCCGCCTCGCCAATTTCCTCAATTCCCTCTTCAACCAATCAGCTTCGAAAAAGAAAAAAAAACCCAAAAACCTCATAAAATCCGAAGATCTCCACGAAAATGGGGCAAGAAAGAGAAGAAGCAGCTTAAGTACGTTGATTGATTCAAAATCATCCTCAATTTATTCATCTTCCAACATTTCTGGATTCAGAACTCCACCAGCTCCCAATTGTACTGTACAAACACCCAACAAAAACTACAAGGAAATCAGAAGCCTTTTGGATCAAAAACGAACATCCTCCAAGAATCTCGGAAGTGGATATCATAAACAAAATCAATACGACATCAGAAAAATGAACGGCGTCGATGAAGGAGCTGAAATGGTGGCTAATCAAGCAAGGTTAAGCATGTGTGAGATGCATGGCATGGATTAG

Coding sequence (CDS)

ATGTCCGTTACCAGCCAACTCTCCTGCAAGCCAAATAAGATCTTCAACAAATCACTTCACCGGCGGAAAGATTCCGGCGAGCTCGACGTCTTCGAAGCCGCCCGCTACTTCTCCGGCTACAATGAGCTCCATTACAACGCCGCCGCCGCCGCCAGCTACGACACTTCCTTATTTTCTCAGAAGATCTTCAGAGAGGATGACGGCGGCTGGAGAGGCGGCAGAATGAGCCTCGACTTACCGATAAGAACCAACATAGTCCCTCTCCCGCAGCCGGAAAAACAAACAACCAAAGACCAAAAAAAACACCGGCAACAACCCAGCTCCCCCGGCGGCCGCCTCGCCAATTTCCTCAATTCCCTCTTCAACCAATCAGCTTCGAAAAAGAAAAAAAAACCCAAAAACCTCATAAAATCCGAAGATCTCCACGAAAATGGGGCAAGAAAGAGAAGAAGCAGCTTAAGTACGTTGATTGATTCAAAATCATCCTCAATTTATTCATCTTCCAACATTTCTGGATTCAGAACTCCACCAGCTCCCAATTGTACTGTACAAACACCCAACAAAAACTACAAGGAAATCAGAAGCCTTTTGGATCAAAAACGAACATCCTCCAAGAATCTCGGAAGTGGATATCATAAACAAAATCAATACGACATCAGAAAAATGAACGGCGTCGATGAAGGAGCTGAAATGGTGGCTAATCAAGCAAGGTTAAGCATGTGTGAGATGCATGGCATGGATTAG

Protein sequence

MSVTSQLSCKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAASYDTSLFSQKIFREDDGGWRGGRMSLDLPIRTNIVPLPQPEKQTTKDQKKHRQQPSSPGGRLANFLNSLFNQSASKKKKKPKNLIKSEDLHENGARKRRSSLSTLIDSKSSSIYSSSNISGFRTPPAPNCTVQTPNKNYKEIRSLLDQKRTSSKNLGSGYHKQNQYDIRKMNGVDEGAEMVANQARLSMCEMHGMD
Homology
[Close]
BLAST of Cp4.1LG01g15200 vs. Swiss-Prot
Match: BIG1E_ARATH (Protein BIG GRAIN 1-like E OS=Arabidopsis thaliana GN=At1g69160 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 8.0e-17
Identity = 94/256 (36.72%), Postives = 133/256 (51.95%), Query Frame = 1 

Query: 1   MSVTSQLSCKPNKIFNK-SLHRRKDSGELDVFEAARYFSGYNELHYNAAAAASYDTSLFS 60
           MS+    S + +K+  + SL  +++S ELDVFEAA YF GYNE    A++     T  + 
Sbjct: 1   MSMKGISSAESDKLSRRISLTHKRNSEELDVFEAAVYF-GYNE----ASSGDHGHTQKYG 60

Query: 61  QKIFREDD-------GGWRGGRMSLDLPIRTN--IVPLPQP-----EKQTTKDQ--KKHR 120
               RE++       GG  G R+SLDLPIR +  +  L Q      E  T K++      
Sbjct: 61  YNAAREENPRRWGILGG--GRRISLDLPIRCSEQVYHLQQDHHEKHEVTTIKERLGNVRH 120

Query: 121 QQPSSPGGRLANFLNSLFNQSASKKKK-------KPKNLIKSEDLHENG--ARKRRSSLS 180
           +QPSSPGG++A+FLNSLF+Q+ SKK K       KP +    E++   G   R+RRSS+S
Sbjct: 121 KQPSSPGGKIASFLNSLFHQAGSKKNKSKSKSKTKPTDPEVEEEIPGGGWMRRRRRSSIS 180

Query: 181 --------------TLIDSKSSSIYSSSNISGFRTPPAPNCTVQTPNKNYKEIRSLLDQK 217
                         T   S S S+ SSS+ SGFRTPP     + TP KNYK+  +     
Sbjct: 181 HFFSSSRSTSTTTTTTASSSSKSLISSSS-SGFRTPPP---YLNTPTKNYKQFLNY---- 240

[Close]
BLAST of Cp4.1LG01g15200 vs. TrEMBL
Match: A0A0A0KSX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606790 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.5e-73
Identity = 173/241 (71.78%), Postives = 187/241 (77.59%), Query Frame = 1 

Query: 1   MSVTSQLSCKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAASYDTSLFSQ 60
           MSVTS LS  P+KIF KSLHRRKDSGELDVFEAARYF+G NE  Y  AA  +Y+TSLF  
Sbjct: 1   MSVTSHLSGHPDKIFRKSLHRRKDSGELDVFEAARYFAGSNEPSYTTAA--TYETSLFH- 60

Query: 61  KIFREDDGGWRGGRMSLDLPIRTNIVPLPQP----EKQTTKDQKKHRQQPSSPGGRLANF 120
                  GG RGGRMSLDLP+RTN++PLP P    EKQ+ KD KKHRQQPSSPGGRLANF
Sbjct: 61  -------GGRRGGRMSLDLPLRTNVIPLPTPPYTAEKQSVKDPKKHRQQPSSPGGRLANF 120

Query: 121 LNSLFNQSASKKKKKPKNLIKSEDL-HENGARKRRSSLSTLIDSKSSSIYSSSNISGFRT 180
           LNSLFNQSASKKKKKPKN IK+EDL HE GARKRRSSLSTLID+KSSS +SSS ISGFRT
Sbjct: 121 LNSLFNQSASKKKKKPKNSIKTEDLHHEMGARKRRSSLSTLIDTKSSS-HSSSKISGFRT 180

Query: 181 PPAPN-CTVQTPNKNYKEIRSLLDQKRT-----SSKNLGSGYHKQNQYDIRKMNGVDEGA 231
           PPAPN CTVQTPNKNY EIRS LDQKR      S KN   G + Q   ++RKMN  DEG 
Sbjct: 181 PPAPNCCTVQTPNKNYMEIRSFLDQKREGINYYSKKN---GINNQKS-EMRKMNDQDEGD 226

[Close]
BLAST of Cp4.1LG01g15200 vs. TrEMBL
Match: A0A061E9H1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_011482 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.8e-38
Identity = 109/207 (52.66%), Postives = 132/207 (63.77%), Query Frame = 1 

Query: 1   MSVTSQLSCKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAASYDTSLFSQ 60
           MSVT      P+++  KS HRR DSGELDVFEAARYFSGYNE       AASY+ + F+Q
Sbjct: 1   MSVTGVSD--PDRMLKKSFHRRNDSGELDVFEAARYFSGYNE-------AASYNCATFTQ 60

Query: 61  KIFREDDGGWRGGRMSLDLPIRTNIVPLPQPEKQTTKD-QKKHRQQPSSPGGRLANFLNS 120
           KI RE+   WRGGR+SLD+P+R    P PQ      K  ++K  +QPSSPGGRLA+FLNS
Sbjct: 61  KIMREERQPWRGGRISLDVPMRN---PFPQQTHAVEKQIKEKKYKQPSSPGGRLASFLNS 120

Query: 121 LFNQSASKKKKKPKNL--IKSEDLHENGARKRRSSLSTLIDSK---SSSIYSSSNISGFR 180
           LFNQ+ SKKKK       +K E+    G RKRRSS+S    S    + S YSSS+ SGFR
Sbjct: 121 LFNQTGSKKKKSKSTTQSMKDEEESPGGRRKRRSSISHFRSSSTVDTKSFYSSSS-SGFR 180

Query: 181 TPPAPNCTVQTPNKNYKEIRSLLDQKR 202
           TPP       TP K+YK+ RS  D K+
Sbjct: 181 TPPP---YAHTPTKSYKDFRSYSDHKQ 191

[Close]
BLAST of Cp4.1LG01g15200 vs. TrEMBL
Match: A0A0D2VBL6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G095800 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 7.5e-38
Identity = 108/206 (52.43%), Postives = 132/206 (64.08%), Query Frame = 1 

Query: 1   MSVTSQLSCKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAASYDTSLFSQ 60
           MSVT      P+++FNKS HRRKDSGELDVFEAARYFSGYNE         SY  + FSQ
Sbjct: 1   MSVTG--FSDPDRMFNKSFHRRKDSGELDVFEAARYFSGYNE------PVGSYSCATFSQ 60

Query: 61  KIFREDDGGWRGGRMSLDLPIRTNIVPLPQPEKQTTKDQKKHRQQPSSPGGRLANFLNSL 120
           +I RE+   WRGGR SLD+P+R  I       ++  K++K   +QPSSPGGRLA+FLNSL
Sbjct: 61  RIMREERQPWRGGRASLDVPMRNPIAQQAHVVEKQIKEKK--YKQPSSPGGRLASFLNSL 120

Query: 121 FNQSASKKKKKPKNL--IKSEDLHENGARKRRSSLSTLIDSKSS---SIYSSSNISGFRT 180
           FNQ++SKKKK       +K E+    G RKRR S+S    S ++   S YSSSN SG RT
Sbjct: 121 FNQTSSKKKKSKSTTQSMKDEEESPGGRRKRRISISHFRSSSTADTKSFYSSSN-SGSRT 180

Query: 181 PPAPNCTVQTPNKNYKEIRSLLDQKR 202
           PP       TP K+YK+ RS LD K+
Sbjct: 181 PPP---YAHTPAKSYKDFRSYLDHKQ 192

[Close]
BLAST of Cp4.1LG01g15200 vs. TrEMBL
Match: A0A0D2RFA6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G147000 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.9e-37
Identity = 106/205 (51.71%), Postives = 133/205 (64.88%), Query Frame = 1 

Query: 13  KIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAASYDTSLFSQKIFREDDGGWRG 72
           ++  KS HRR DSGELDVFEAARYFSGYNE       A+SY+ + F+QKI RE+   WRG
Sbjct: 11  RMLKKSFHRRNDSGELDVFEAARYFSGYNE-------ASSYNCATFTQKIMREERQPWRG 70

Query: 73  GRMSLDLPIRTNIVPLPQPEKQTTKDQK-KHRQQPSSPGGRLANFLNSLFNQSASKKKKK 132
           GR+SLD+P+R    PLPQ      K  K K  +QPSSPGGRLA+FLNSLFNQ+ SKKKK 
Sbjct: 71  GRVSLDVPMRN---PLPQQVHVVDKQIKDKKYKQPSSPGGRLASFLNSLFNQTGSKKKKS 130

Query: 133 PKNL--IKSEDLHENGARKRRSSLSTLIDS---KSSSIYSSSNISGFRTPPAPNCTVQTP 192
                 +K E+   +G RKRRSS+S  + S   ++ S+YS+S+ SGFRTPP       TP
Sbjct: 131 KSTTQSMKGEEESPSGRRKRRSSISHFLSSSTAETKSLYSASS-SGFRTPPP---YAHTP 190

Query: 193 NKNYKEIRSLLDQKRT---SSKNLG 209
            K+Y+E RS  D +     S  N+G
Sbjct: 191 TKSYREFRSYSDHREVLSLSKNNIG 201

[Close]
BLAST of Cp4.1LG01g15200 vs. TrEMBL
Match: A0A067L294_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15740 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.9e-37
Identity = 108/213 (50.70%), Postives = 139/213 (65.26%), Query Frame = 1 

Query: 1   MSVTSQLSCKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAASYDTSLFSQ 60
           MS+T  LS   +K++ K+ H R DS ELDVFEAARYFSGYNE        + Y+ + ++Q
Sbjct: 1   MSITG-LSSDTSKLYKKTFHLRNDSDELDVFEAARYFSGYNE-------GSGYNGASYTQ 60

Query: 61  KIFRED-DGGWRGGRMSLDLPIRTNIVPLPQPEKQTTKDQ---KKHRQQPSSPGGRLANF 120
           K+ +ED    WRGGRMSLD+P+RT   PLP  + +T + Q   +K  +QPSSPGGRLA+F
Sbjct: 61  KVIKEDYRHQWRGGRMSLDVPMRT---PLPHQQSKTVEKQILKEKKYKQPSSPGGRLASF 120

Query: 121 LNSLFNQSASKKKKKPKNL--IKSEDLHENGARKRRSSLSTLIDSKSS---SIYSSSNIS 180
           LNSLFNQ++SKKKK       +K ED   +G RKRRSS+S    S S+   S+YSSS+ S
Sbjct: 121 LNSLFNQTSSKKKKSKSTTQSMKDEDESPSGRRKRRSSISHFRSSSSADTKSLYSSSS-S 180

Query: 181 GFRTPPAPNCTVQTPNKNYKEIRSLLDQKRTSS 205
           GFRTPP       TP K+YK+ RS  D K+  S
Sbjct: 181 GFRTPPP---YAHTPTKSYKDFRSYSDHKQVIS 198

[Close]
BLAST of Cp4.1LG01g15200 vs. TAIR10
Match: AT1G69160.1 (AT1G69160.1 unknown protein)

HSP 1 Score: 89.0 bits (219), Expect = 4.5e-18
Identity = 94/256 (36.72%), Postives = 133/256 (51.95%), Query Frame = 1 

Query: 1   MSVTSQLSCKPNKIFNK-SLHRRKDSGELDVFEAARYFSGYNELHYNAAAAASYDTSLFS 60
           MS+    S + +K+  + SL  +++S ELDVFEAA YF GYNE    A++     T  + 
Sbjct: 1   MSMKGISSAESDKLSRRISLTHKRNSEELDVFEAAVYF-GYNE----ASSGDHGHTQKYG 60

Query: 61  QKIFREDD-------GGWRGGRMSLDLPIRTN--IVPLPQP-----EKQTTKDQ--KKHR 120
               RE++       GG  G R+SLDLPIR +  +  L Q      E  T K++      
Sbjct: 61  YNAAREENPRRWGILGG--GRRISLDLPIRCSEQVYHLQQDHHEKHEVTTIKERLGNVRH 120

Query: 121 QQPSSPGGRLANFLNSLFNQSASKKKK-------KPKNLIKSEDLHENG--ARKRRSSLS 180
           +QPSSPGG++A+FLNSLF+Q+ SKK K       KP +    E++   G   R+RRSS+S
Sbjct: 121 KQPSSPGGKIASFLNSLFHQAGSKKNKSKSKSKTKPTDPEVEEEIPGGGWMRRRRRSSIS 180

Query: 181 --------------TLIDSKSSSIYSSSNISGFRTPPAPNCTVQTPNKNYKEIRSLLDQK 217
                         T   S S S+ SSS+ SGFRTPP     + TP KNYK+  +     
Sbjct: 181 HFFSSSRSTSTTTTTTASSSSKSLISSSS-SGFRTPPP---YLNTPTKNYKQFLNY---- 240

[Close]
BLAST of Cp4.1LG01g15200 vs. NCBI nr
Match: gi|778705642|ref|XP_011655719.1| (PREDICTED: uncharacterized protein LOC105435577 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 2.1e-73
Identity = 173/241 (71.78%), Postives = 187/241 (77.59%), Query Frame = 1 

Query: 1   MSVTSQLSCKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAASYDTSLFSQ 60
           MSVTS LS  P+KIF KSLHRRKDSGELDVFEAARYF+G NE  Y  AA  +Y+TSLF  
Sbjct: 1   MSVTSHLSGHPDKIFRKSLHRRKDSGELDVFEAARYFAGSNEPSYTTAA--TYETSLFH- 60

Query: 61  KIFREDDGGWRGGRMSLDLPIRTNIVPLPQP----EKQTTKDQKKHRQQPSSPGGRLANF 120
                  GG RGGRMSLDLP+RTN++PLP P    EKQ+ KD KKHRQQPSSPGGRLANF
Sbjct: 61  -------GGRRGGRMSLDLPLRTNVIPLPTPPYTAEKQSVKDPKKHRQQPSSPGGRLANF 120

Query: 121 LNSLFNQSASKKKKKPKNLIKSEDL-HENGARKRRSSLSTLIDSKSSSIYSSSNISGFRT 180
           LNSLFNQSASKKKKKPKN IK+EDL HE GARKRRSSLSTLID+KSSS +SSS ISGFRT
Sbjct: 121 LNSLFNQSASKKKKKPKNSIKTEDLHHEMGARKRRSSLSTLIDTKSSS-HSSSKISGFRT 180

Query: 181 PPAPN-CTVQTPNKNYKEIRSLLDQKRT-----SSKNLGSGYHKQNQYDIRKMNGVDEGA 231
           PPAPN CTVQTPNKNY EIRS LDQKR      S KN   G + Q   ++RKMN  DEG 
Sbjct: 181 PPAPNCCTVQTPNKNYMEIRSFLDQKREGINYYSKKN---GINNQKS-EMRKMNDQDEGD 226

[Close]
BLAST of Cp4.1LG01g15200 vs. NCBI nr
Match: gi|1009154513|ref|XP_015895212.1| (PREDICTED: protein BIG GRAIN 1-like E [Ziziphus jujuba])

HSP 1 Score: 167.5 bits (423), Expect = 2.8e-38
Identity = 113/213 (53.05%), Postives = 136/213 (63.85%), Query Frame = 1 

Query: 1   MSVTSQLSCKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAASYDTSLFSQ 60
           MS+T  L+    KI+ KS HRR DSGELDVFEAARYFSGYNE       AA Y+ S F+Q
Sbjct: 1   MSITG-LADPDTKIYKKSFHRRNDSGELDVFEAARYFSGYNE-------AAGYNGSTFTQ 60

Query: 61  KIF-REDDGGWRGGRMSLDLPIRTNIVPLPQPEKQTTKDQKKHRQ--QPSSPGGRLANFL 120
           K+  +ED   WRG R+SLD+P   +++P  Q   Q  + Q K ++  QPSSPGGRLA+FL
Sbjct: 61  KMMMKEDHRTWRGARISLDVPAMRSVLPHHQQSHQMVEKQIKDKKYKQPSSPGGRLASFL 120

Query: 121 NSLFNQSASKKKKKPKNLIKSEDLHE---NGARKRRSSLSTLIDSK---SSSIYSSSNIS 180
           NSLF+QSASKKKK   +    +D  E    G RKRRSS+S    S    S SIYSSS+ S
Sbjct: 121 NSLFSQSASKKKKSKSSTQSMKDHEEESPGGRRKRRSSISHFRSSSTTDSKSIYSSSS-S 180

Query: 181 GFRTPPAPNCTVQTPNKNYKEIRSLLDQKRTSS 205
           GFRTPP      QTP K+YKE RS  D K+  S
Sbjct: 181 GFRTPPP---YAQTPTKSYKEFRSYSDHKQAVS 201

[Close]
BLAST of Cp4.1LG01g15200 vs. NCBI nr
Match: gi|590698888|ref|XP_007045803.1| (Uncharacterized protein TCM_011482 [Theobroma cacao])

HSP 1 Score: 166.0 bits (419), Expect = 8.3e-38
Identity = 109/207 (52.66%), Postives = 132/207 (63.77%), Query Frame = 1 

Query: 1   MSVTSQLSCKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAASYDTSLFSQ 60
           MSVT      P+++  KS HRR DSGELDVFEAARYFSGYNE       AASY+ + F+Q
Sbjct: 1   MSVTGVSD--PDRMLKKSFHRRNDSGELDVFEAARYFSGYNE-------AASYNCATFTQ 60

Query: 61  KIFREDDGGWRGGRMSLDLPIRTNIVPLPQPEKQTTKD-QKKHRQQPSSPGGRLANFLNS 120
           KI RE+   WRGGR+SLD+P+R    P PQ      K  ++K  +QPSSPGGRLA+FLNS
Sbjct: 61  KIMREERQPWRGGRISLDVPMRN---PFPQQTHAVEKQIKEKKYKQPSSPGGRLASFLNS 120

Query: 121 LFNQSASKKKKKPKNL--IKSEDLHENGARKRRSSLSTLIDSK---SSSIYSSSNISGFR 180
           LFNQ+ SKKKK       +K E+    G RKRRSS+S    S    + S YSSS+ SGFR
Sbjct: 121 LFNQTGSKKKKSKSTTQSMKDEEESPGGRRKRRSSISHFRSSSTVDTKSFYSSSS-SGFR 180

Query: 181 TPPAPNCTVQTPNKNYKEIRSLLDQKR 202
           TPP       TP K+YK+ RS  D K+
Sbjct: 181 TPPP---YAHTPTKSYKDFRSYSDHKQ 191

[Close]
BLAST of Cp4.1LG01g15200 vs. NCBI nr
Match: gi|823265748|ref|XP_012465595.1| (PREDICTED: uncharacterized protein LOC105784296 [Gossypium raimondii])

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-37
Identity = 108/206 (52.43%), Postives = 132/206 (64.08%), Query Frame = 1 

Query: 1   MSVTSQLSCKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAASYDTSLFSQ 60
           MSVT      P+++FNKS HRRKDSGELDVFEAARYFSGYNE         SY  + FSQ
Sbjct: 1   MSVTG--FSDPDRMFNKSFHRRKDSGELDVFEAARYFSGYNE------PVGSYSCATFSQ 60

Query: 61  KIFREDDGGWRGGRMSLDLPIRTNIVPLPQPEKQTTKDQKKHRQQPSSPGGRLANFLNSL 120
           +I RE+   WRGGR SLD+P+R  I       ++  K++K   +QPSSPGGRLA+FLNSL
Sbjct: 61  RIMREERQPWRGGRASLDVPMRNPIAQQAHVVEKQIKEKK--YKQPSSPGGRLASFLNSL 120

Query: 121 FNQSASKKKKKPKNL--IKSEDLHENGARKRRSSLSTLIDSKSS---SIYSSSNISGFRT 180
           FNQ++SKKKK       +K E+    G RKRR S+S    S ++   S YSSSN SG RT
Sbjct: 121 FNQTSSKKKKSKSTTQSMKDEEESPGGRRKRRISISHFRSSSTADTKSFYSSSN-SGSRT 180

Query: 181 PPAPNCTVQTPNKNYKEIRSLLDQKR 202
           PP       TP K+YK+ RS LD K+
Sbjct: 181 PPP---YAHTPAKSYKDFRSYLDHKQ 192

[Close]
BLAST of Cp4.1LG01g15200 vs. NCBI nr
Match: gi|802568685|ref|XP_012067819.1| (PREDICTED: uncharacterized protein LOC105630573 [Jatropha curcas])

HSP 1 Score: 163.7 bits (413), Expect = 4.1e-37
Identity = 108/213 (50.70%), Postives = 139/213 (65.26%), Query Frame = 1 

Query: 1   MSVTSQLSCKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAASYDTSLFSQ 60
           MS+T  LS   +K++ K+ H R DS ELDVFEAARYFSGYNE        + Y+ + ++Q
Sbjct: 1   MSITG-LSSDTSKLYKKTFHLRNDSDELDVFEAARYFSGYNE-------GSGYNGASYTQ 60

Query: 61  KIFRED-DGGWRGGRMSLDLPIRTNIVPLPQPEKQTTKDQ---KKHRQQPSSPGGRLANF 120
           K+ +ED    WRGGRMSLD+P+RT   PLP  + +T + Q   +K  +QPSSPGGRLA+F
Sbjct: 61  KVIKEDYRHQWRGGRMSLDVPMRT---PLPHQQSKTVEKQILKEKKYKQPSSPGGRLASF 120

Query: 121 LNSLFNQSASKKKKKPKNL--IKSEDLHENGARKRRSSLSTLIDSKSS---SIYSSSNIS 180
           LNSLFNQ++SKKKK       +K ED   +G RKRRSS+S    S S+   S+YSSS+ S
Sbjct: 121 LNSLFNQTSSKKKKSKSTTQSMKDEDESPSGRRKRRSSISHFRSSSSADTKSLYSSSS-S 180

Query: 181 GFRTPPAPNCTVQTPNKNYKEIRSLLDQKRTSS 205
           GFRTPP       TP K+YK+ RS  D K+  S
Sbjct: 181 GFRTPPP---YAHTPTKSYKDFRSYSDHKQVIS 198

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g15200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BIG1E_ARATH8.0e-1736.72Protein BIG GRAIN 1-like E OS=Arabidopsis thaliana GN=At1g69160 PE=2 SV=1[more]
BLAST of Cp4.1LG01g15200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSX8_CUCSA1.5e-7371.78Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606790 PE=4 SV=1[more]
A0A061E9H1_THECC5.8e-3852.66Uncharacterized protein OS=Theobroma cacao GN=TCM_011482 PE=4 SV=1[more]
A0A0D2VBL6_GOSRA7.5e-3852.43Uncharacterized protein OS=Gossypium raimondii GN=B456_013G095800 PE=4 SV=1[more]
A0A0D2RFA6_GOSRA2.9e-3751.71Uncharacterized protein OS=Gossypium raimondii GN=B456_005G147000 PE=4 SV=1[more]
A0A067L294_JATCU2.9e-3750.70Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15740 PE=4 SV=1[more]
BLAST of Cp4.1LG01g15200 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69160.14.5e-1836.72 unknown protein[more]
BLAST of Cp4.1LG01g15200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778705642|ref|XP_011655719.1|2.1e-7371.78PREDICTED: uncharacterized protein LOC105435577 [Cucumis sativus][more]
gi|1009154513|ref|XP_015895212.1|2.8e-3853.05PREDICTED: protein BIG GRAIN 1-like E [Ziziphus jujuba][more]
gi|590698888|ref|XP_007045803.1|8.3e-3852.66Uncharacterized protein TCM_011482 [Theobroma cacao][more]
gi|823265748|ref|XP_012465595.1|1.1e-3752.43PREDICTED: uncharacterized protein LOC105784296 [Gossypium raimondii][more]
gi|802568685|ref|XP_012067819.1|4.1e-3750.70PREDICTED: uncharacterized protein LOC105630573 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g15200.1Cp4.1LG01g15200.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33541FAMILY NOT NAMEDcoord: 11..216
score: 4.3
NoneNo IPR availablePANTHERPTHR33541:SF3SUBFAMILY NOT NAMEDcoord: 11..216
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g15200Cucsa.284420Cucumber (Gy14) v1cgycpeB0754
Cp4.1LG01g15200CmaCh04G017100Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g15200CmoCh18G011190Cucurbita moschata (Rifu)cmocpeB395
Cp4.1LG01g15200CmoCh04G017960Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g15200Cla020311Watermelon (97103) v1cpewmB432
Cp4.1LG01g15200Csa5G606790Cucumber (Chinese Long) v2cpecuB416
Cp4.1LG01g15200MELO3C012160Melon (DHL92) v3.5.1cpemeB377
Cp4.1LG01g15200ClCG05G023610Watermelon (Charleston Gray)cpewcgB393
Cp4.1LG01g15200CSPI05G24420Wild cucumber (PI 183967)cpecpiB415
Cp4.1LG01g15200Lsi04G003540Bottle gourd (USVL1VR-Ls)cpelsiB360
Cp4.1LG01g15200MELO3C012160.2Melon (DHL92) v3.6.1cpemedB437
Cp4.1LG01g15200CsaV3_5G033410Cucumber (Chinese Long) v3cpecucB0518
Cp4.1LG01g15200Bhi07G001213Wax gourdcpewgoB0568
Cp4.1LG01g15200CsGy5G023920Cucumber (Gy14) v2cgybcpeB626
Cp4.1LG01g15200Carg14361Silver-seed gourdcarcpeB0344
Cp4.1LG01g15200Carg17318Silver-seed gourdcarcpeB0148
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g15200Cp4.1LG09g02370Cucurbita pepo (Zucchini)cpecpeB034
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g15200Wild cucumber (PI 183967)cpecpiB379
Cp4.1LG01g15200Cucumber (Chinese Long) v2cpecuB379
Cp4.1LG01g15200Cucumber (Gy14) v2cgybcpeB060
Cp4.1LG01g15200Melon (DHL92) v3.6.1cpemedB454
Cp4.1LG01g15200Melon (DHL92) v3.6.1cpemedB459
Cp4.1LG01g15200Cucumber (Chinese Long) v3cpecucB0471
Cp4.1LG01g15200Wax gourdcpewgoB0550