CmoCh18G011190 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G011190
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Plant/F4N2-9 protein, putative
Location	Cmo_Chr18 : 11563406 .. 11564074 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGCCGCCACCCACCTCTCCGGCAACCCAGATAAGATCTTCCACAAACCACCACATCGGCGGAACGCTTCCACCGAGCTCGACGTCTTCGAAGCCGCCCGCTACTTCTCCGGTAGCAACGAACTCATTTACACCAACACTTCATCATTCACTCACAATATCATCAGAGAGGATCACAGCAGCCGGAGAGGCGGAAGAATGAGCCTCGACTTGCCGTTAAGAACCAATGCAGCTCCACCGCCGCCGTACACGGCGGAGAAGCCACCAATCAAAGAGAAAAAACACCGGCAACAACCCAGCTCCCCGGCTGGTCGGCTCGCCAATTTCCTCAATTCCCTCTTCAACCAATCAGCTTCTCAAAAGAAAAAGAAACCCAAAAATGGCATGAAAAACGATGAATTTCATCACGAAATTGGAGCAAGAAAGAGAAGAAGCAGCTTAAGTTCGCTCATCGATTCAAAATCATCTTCAAACATCTCAGCTCCCAACAAAAATTACAAGCAAATCAGAAACCTTTTGGATCAGACACGACCAGCTTCCAAGAATCTCGGAAATGTTAAGCAAAATTCTGATCACCCGACCAGAAAAATCAAAGATGTCGACCAAGATGCTCGAAGTGATTCAAGTTCCGATCTTTTTGAGCTACGAATCTACGACTTCGATTGA

mRNA sequence

ATGTCCGCCGCCACCCACCTCTCCGGCAACCCAGATAAGATCTTCCACAAACCACCACATCGGCGGAACGCTTCCACCGAGCTCGACGTCTTCGAAGCCGCCCGCTACTTCTCCGGTAGCAACGAACTCATTTACACCAACACTTCATCATTCACTCACAATATCATCAGAGAGGATCACAGCAGCCGGAGAGGCGGAAGAATGAGCCTCGACTTGCCGTTAAGAACCAATGCAGCTCCACCGCCGCCGTACACGGCGGAGAAGCCACCAATCAAAGAGAAAAAACACCGGCAACAACCCAGCTCCCCGGCTGGTCGGCTCGCCAATTTCCTCAATTCCCTCTTCAACCAATCAGCTTCTCAAAAGAAAAAGAAACCCAAAAATGGCATGAAAAACGATGAATTTCATCACGAAATTGGAGCAAGAAAGAGAAGAAGCAGCTTAAGTTCGCTCATCGATTCAAAATCATCTTCAAACATCTCAGCTCCCAACAAAAATTACAAGCAAATCAGAAACCTTTTGGATCAGACACGACCAGCTTCCAAGAATCTCGGAAATGTTAAGCAAAATTCTGATCACCCGACCAGAAAAATCAAAGATGTCGACCAAGATGCTCGAAGTGATTCAAGTTCCGATCTTTTTGAGCTACGAATCTACGACTTCGATTGA

Coding sequence (CDS)

ATGTCCGCCGCCACCCACCTCTCCGGCAACCCAGATAAGATCTTCCACAAACCACCACATCGGCGGAACGCTTCCACCGAGCTCGACGTCTTCGAAGCCGCCCGCTACTTCTCCGGTAGCAACGAACTCATTTACACCAACACTTCATCATTCACTCACAATATCATCAGAGAGGATCACAGCAGCCGGAGAGGCGGAAGAATGAGCCTCGACTTGCCGTTAAGAACCAATGCAGCTCCACCGCCGCCGTACACGGCGGAGAAGCCACCAATCAAAGAGAAAAAACACCGGCAACAACCCAGCTCCCCGGCTGGTCGGCTCGCCAATTTCCTCAATTCCCTCTTCAACCAATCAGCTTCTCAAAAGAAAAAGAAACCCAAAAATGGCATGAAAAACGATGAATTTCATCACGAAATTGGAGCAAGAAAGAGAAGAAGCAGCTTAAGTTCGCTCATCGATTCAAAATCATCTTCAAACATCTCAGCTCCCAACAAAAATTACAAGCAAATCAGAAACCTTTTGGATCAGACACGACCAGCTTCCAAGAATCTCGGAAATGTTAAGCAAAATTCTGATCACCCGACCAGAAAAATCAAAGATGTCGACCAAGATGCTCGAAGTGATTCAAGTTCCGATCTTTTTGAGCTACGAATCTACGACTTCGATTGA

Homology

[Close]

BLAST of CmoCh18G011190 vs. Swiss-Prot
Match: BIG1E_ARATH (Protein BIG GRAIN 1-like E OS=Arabidopsis thaliana GN=At1g69160 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.2e-13
Identity = 92/281 (32.74%), Postives = 123/281 (43.77%), Query Frame = 1


Query: 20  HRRNASTELDVFEAARYFSGSNELI---YTNTSSFTHNIIREDHSSR-----RGGRMSLD 79
           H+RN S ELDVFEAA YF G NE     + +T  + +N  RE++  R      G R+SLD
Sbjct: 22  HKRN-SEELDVFEAAVYF-GYNEASSGDHGHTQKYGYNAAREENPRRWGILGGGRRISLD 81

Query: 80  LPLRTNAA---------PPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSASQK 139
           LP+R +                T  K  +   +H+Q PSSP G++A+FLNSLF+Q+ S+K
Sbjct: 82  LPIRCSEQVYHLQQDHHEKHEVTTIKERLGNVRHKQ-PSSPGGKIASFLNSLFHQAGSKK 141

Query: 140 ---KKKPKNGMKNDEFHHEIGA-----RKRRSSLS----------------------SLI 199
              K K K    + E   EI       R+RRSS+S                      SLI
Sbjct: 142 NKSKSKSKTKPTDPEVEEEIPGGGWMRRRRRSSISHFFSSSRSTSTTTTTTASSSSKSLI 201

Query: 200 DSKSSS------NISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIK------- 221
            S SS        ++ P KNYKQ  N    T+   +      +       K+K       
Sbjct: 202 SSSSSGFRTPPPYLNTPTKNYKQFLNYTSATKQVGEEETKTNKEYSWLDEKLKVMESLSE 261

[Close]

BLAST of CmoCh18G011190 vs. TrEMBL
Match: A0A0A0KSX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606790 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.3e-60
Identity = 145/245 (59.18%), Postives = 169/245 (68.98%), Query Frame = 1


Query: 1   MSAATHLSGNPDKIFHKPPHRRNASTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH 60
           MS  +HLSG+PDKIF K  HRR  S ELDVFEAARYF+GSNE  YT  +++  ++    H
Sbjct: 1   MSVTSHLSGHPDKIFRKSLHRRKDSGELDVFEAARYFAGSNEPSYTTAATYETSLF---H 60

Query: 61  SSRRGGRMSLDLPLRTNAAP--PPPYTAEKPPIKE-KKHRQQPSSPAGRLANFLNSLFNQ 120
             RRGGRMSLDLPLRTN  P   PPYTAEK  +K+ KKHRQQPSSP GRLANFLNSLFNQ
Sbjct: 61  GGRRGGRMSLDLPLRTNVIPLPTPPYTAEKQSVKDPKKHRQQPSSPGGRLANFLNSLFNQ 120

Query: 121 SASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSN------------------ 180
           SAS+KKKKPKN +K ++ HHE+GARKRRSSLS+LID+KSSS+                  
Sbjct: 121 SASKKKKKPKNSIKTEDLHHEMGARKRRSSLSTLIDTKSSSHSSSKISGFRTPPAPNCCT 180

Query: 181 ISAPNKNYKQIRNLLDQTRPA----SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFE 221
           +  PNKNY +IR+ LDQ R      SK  G   Q S+   RK+ D D+   SDSSSDLFE
Sbjct: 181 VQTPNKNYMEIRSFLDQKREGINYYSKKNGINNQKSE--MRKMNDQDEGDESDSSSDLFE 240

[Close]

BLAST of CmoCh18G011190 vs. TrEMBL
Match: A0A067L294_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15740 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.4e-29
Identity = 119/290 (41.03%), Postives = 148/290 (51.03%), Query Frame = 1


Query: 5   THLSGNPDKIFHKPPHRRNASTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSR- 64
           T LS +  K++ K  H RN S ELDVFEAARYFSG NE    N +S+T  +I+ED+  + 
Sbjct: 4   TGLSSDTSKLYKKTFHLRNDSDELDVFEAARYFSGYNEGSGYNGASYTQKVIKEDYRHQW 63

Query: 65  RGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSASQKK 124
           RGGRMSLD+P+RT        T EK  +KEKK++ QPSSP GRLA+FLNSLFNQ++S+KK
Sbjct: 64  RGGRMSLDVPMRTPLPHQQSKTVEKQILKEKKYK-QPSSPGGRLASFLNSLFNQTSSKKK 123

Query: 125 K-KPKNGMKNDEFHHEIGARKRRSSL-----SSLIDSKS--SSNIS----------APNK 184
           K K       DE     G RKRRSS+     SS  D+KS  SS+ S           P K
Sbjct: 124 KSKSTTQSMKDEDESPSGRRKRRSSISHFRSSSSADTKSLYSSSSSGFRTPPPYAHTPTK 183

Query: 185 NYKQIRNLLDQTRPAS--KNLGNVK----QNS---------------------------- 221
           +YK  R+  D  +  S  K+ GNVK    QN                             
Sbjct: 184 SYKDFRSYSDHKQVISLPKHNGNVKSTGLQNEILDDKRIADLSWLDEKFKFSDGFSEKSK 243

[Close]

BLAST of CmoCh18G011190 vs. TrEMBL
Match: G7JX10_MEDTR (Plant/F4N2-9 protein, putative OS=Medicago truncatula GN=MTR_5g046750 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-28
Identity = 104/244 (42.62%), Postives = 135/244 (55.33%), Query Frame = 1


Query: 20  HRRNASTELDVFEAARYFSGSNELI-YTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNA 79
           HRRN S ELDVFEA+RYFSG NE+I Y N+S+FT  I+RE+ +  + GR+SLD+P+R+  
Sbjct: 20  HRRNDSGELDVFEASRYFSGYNEVIGYNNSSTFTQKIMREERNGYK-GRISLDMPMRSLL 79

Query: 80  APPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHE 139
                   ++  +KEKKH +QPSSP GRLA+FLNSLFNQS S+KK K  +    DE    
Sbjct: 80  PQQFHGGIDQKQMKEKKHNKQPSSPGGRLASFLNSLFNQSTSKKKSKSSSQSMKDEDESP 139

Query: 140 IGARKRRSSL-----SSLIDSKS--SSN--------ISAPNKNYKQIRNLL-DQTRPAS- 199
            G R+RRSS+     SS  DS+S  S N        ++ P K  ++ + LL DQ    S 
Sbjct: 140 GGRRRRRSSISHFRSSSTADSRSIYSLNSGFRTPPYVNTPTKGCREFKTLLSDQKNEVSL 199

Query: 200 -----------------KNLGNVKQ--------NSDHPTRKIKDVDQDARSDSSSDLFEL 221
                            K   N+KQ              RK  +VD  A SDSSSDLFEL
Sbjct: 200 KKSSTTLQNELCWDDKKKRDSNLKQFVEKKYYEEEKREVRKFNEVDDGAESDSSSDLFEL 259

[Close]

BLAST of CmoCh18G011190 vs. TrEMBL
Match: B9HXH6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s16385g PE=4 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.8e-27
Identity = 93/197 (47.21%), Postives = 120/197 (60.91%), Query Frame = 1


Query: 5   THLSGNPDKIFHKPPHRRNASTELDVFEAARYFSGSNEL-IYTNTSSFTHNIIREDH-SS 64
           T LS +P K + K  HRRN S ELDVFEAARYFSG NE     N +++T  ++REDH +S
Sbjct: 4   TGLSSDPSKPYKKSLHRRNNSDELDVFEAARYFSGYNEAGAGYNGATYTQRVMREDHKNS 63

Query: 65  RRGGRMSLDLPLRTNAAP----PPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQS 124
            RGGRMSLD+P+R N  P      P+T EK  +KEKK++Q PSSP GRLA+FLNSLFNQ+
Sbjct: 64  WRGGRMSLDVPMR-NPLPHHIHQQPHTVEKQILKEKKYKQ-PSSPGGRLASFLNSLFNQT 123

Query: 125 ASQKKKKPK--NGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQ 184
           +S+ KK       MK+D+     G RKRRSS+S    S ++   S  + +    R     
Sbjct: 124 SSKNKKSKSTTQSMKDDD-ESPGGRRKRRSSISHFRSSSTTDTKSLYSSSSSGFRTPSPY 183

Query: 185 TRPASKNLGNVKQNSDH 194
           T P +K     +  SDH
Sbjct: 184 THPPTKGCKESRSYSDH 197

[Close]

BLAST of CmoCh18G011190 vs. TrEMBL
Match: B9REB4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1619950 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.4e-27
Identity = 118/294 (40.14%), Postives = 151/294 (51.36%), Query Frame = 1


Query: 7   LSGNPD--KIFHKPPHRRNASTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSR- 66
           ++G PD  K++ K  HRRN S ELDVFEAARYFSG NE    N  ++T  I+R+D+    
Sbjct: 3   ITGLPDTSKLYKKSLHRRNDSDELDVFEAARYFSGYNEAAGYNGGTYTQKILRDDYRHPW 62

Query: 67  RGGRMSLDLPLRTNAAPPPP----YTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSA 126
           RGGRMSLD+P+R N  P       +T EK  +KEKK++ QPSSP GRLA+FLNSLFNQ++
Sbjct: 63  RGGRMSLDVPMR-NPLPQQTHSHHHTVEKQILKEKKYK-QPSSPGGRLASFLNSLFNQTS 122

Query: 127 SQKKK-KPKNGMKNDEFHHEIGARKRRSSLS-----SLIDSKS--SSNIS---------- 186
           S+KKK K       D+     G RKRRSS+S     S  D+KS  SS+ S          
Sbjct: 123 SKKKKSKSATQSTKDDDESPGGRRKRRSSISHFRSTSTADTKSLYSSSSSGFRTPPPYAN 182

Query: 187 APNKNYKQIRNLLDQTRPASKNL--GNVK----QNS------------------------ 221
            P K+YK +R+  D  +  S ++  GNVK    QN                         
Sbjct: 183 TPTKSYKDLRSYSDHKQVISLSMQNGNVKSTGLQNEVLDEKKKTDLSWLDEKFKISDALS 242

[Close]

BLAST of CmoCh18G011190 vs. TAIR10
Match: AT1G69160.1 (AT1G69160.1 unknown protein)

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-14
Identity = 92/281 (32.74%), Postives = 123/281 (43.77%), Query Frame = 1


Query: 20  HRRNASTELDVFEAARYFSGSNELI---YTNTSSFTHNIIREDHSSR-----RGGRMSLD 79
           H+RN S ELDVFEAA YF G NE     + +T  + +N  RE++  R      G R+SLD
Sbjct: 22  HKRN-SEELDVFEAAVYF-GYNEASSGDHGHTQKYGYNAAREENPRRWGILGGGRRISLD 81

Query: 80  LPLRTNAA---------PPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSASQK 139
           LP+R +                T  K  +   +H+Q PSSP G++A+FLNSLF+Q+ S+K
Sbjct: 82  LPIRCSEQVYHLQQDHHEKHEVTTIKERLGNVRHKQ-PSSPGGKIASFLNSLFHQAGSKK 141

Query: 140 ---KKKPKNGMKNDEFHHEIGA-----RKRRSSLS----------------------SLI 199
              K K K    + E   EI       R+RRSS+S                      SLI
Sbjct: 142 NKSKSKSKTKPTDPEVEEEIPGGGWMRRRRRSSISHFFSSSRSTSTTTTTTASSSSKSLI 201

Query: 200 DSKSSS------NISAPNKNYKQIRNLLDQTRPASKNLGNVKQNSDHPTRKIK------- 221
            S SS        ++ P KNYKQ  N    T+   +      +       K+K       
Sbjct: 202 SSSSSGFRTPPPYLNTPTKNYKQFLNYTSATKQVGEEETKTNKEYSWLDEKLKVMESLSE 261

[Close]

BLAST of CmoCh18G011190 vs. NCBI nr
Match: gi|778705642|ref|XP_011655719.1| (PREDICTED: uncharacterized protein LOC105435577 [Cucumis sativus])

HSP 1 Score: 241.1 bits (614), Expect = 1.8e-60
Identity = 145/245 (59.18%), Postives = 169/245 (68.98%), Query Frame = 1


Query: 1   MSAATHLSGNPDKIFHKPPHRRNASTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDH 60
           MS  +HLSG+PDKIF K  HRR  S ELDVFEAARYF+GSNE  YT  +++  ++    H
Sbjct: 1   MSVTSHLSGHPDKIFRKSLHRRKDSGELDVFEAARYFAGSNEPSYTTAATYETSLF---H 60

Query: 61  SSRRGGRMSLDLPLRTNAAP--PPPYTAEKPPIKE-KKHRQQPSSPAGRLANFLNSLFNQ 120
             RRGGRMSLDLPLRTN  P   PPYTAEK  +K+ KKHRQQPSSP GRLANFLNSLFNQ
Sbjct: 61  GGRRGGRMSLDLPLRTNVIPLPTPPYTAEKQSVKDPKKHRQQPSSPGGRLANFLNSLFNQ 120

Query: 121 SASQKKKKPKNGMKNDEFHHEIGARKRRSSLSSLIDSKSSSN------------------ 180
           SAS+KKKKPKN +K ++ HHE+GARKRRSSLS+LID+KSSS+                  
Sbjct: 121 SASKKKKKPKNSIKTEDLHHEMGARKRRSSLSTLIDTKSSSHSSSKISGFRTPPAPNCCT 180

Query: 181 ISAPNKNYKQIRNLLDQTRPA----SKNLGNVKQNSDHPTRKIKDVDQDARSDSSSDLFE 221
           +  PNKNY +IR+ LDQ R      SK  G   Q S+   RK+ D D+   SDSSSDLFE
Sbjct: 181 VQTPNKNYMEIRSFLDQKREGINYYSKKNGINNQKSE--MRKMNDQDEGDESDSSSDLFE 240

[Close]

BLAST of CmoCh18G011190 vs. NCBI nr
Match: gi|802568685|ref|XP_012067819.1| (PREDICTED: uncharacterized protein LOC105630573 [Jatropha curcas])

HSP 1 Score: 136.7 bits (343), Expect = 4.8e-29
Identity = 119/290 (41.03%), Postives = 148/290 (51.03%), Query Frame = 1


Query: 5   THLSGNPDKIFHKPPHRRNASTELDVFEAARYFSGSNELIYTNTSSFTHNIIREDHSSR- 64
           T LS +  K++ K  H RN S ELDVFEAARYFSG NE    N +S+T  +I+ED+  + 
Sbjct: 4   TGLSSDTSKLYKKTFHLRNDSDELDVFEAARYFSGYNEGSGYNGASYTQKVIKEDYRHQW 63

Query: 65  RGGRMSLDLPLRTNAAPPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSASQKK 124
           RGGRMSLD+P+RT        T EK  +KEKK++ QPSSP GRLA+FLNSLFNQ++S+KK
Sbjct: 64  RGGRMSLDVPMRTPLPHQQSKTVEKQILKEKKYK-QPSSPGGRLASFLNSLFNQTSSKKK 123

Query: 125 K-KPKNGMKNDEFHHEIGARKRRSSL-----SSLIDSKS--SSNIS----------APNK 184
           K K       DE     G RKRRSS+     SS  D+KS  SS+ S           P K
Sbjct: 124 KSKSTTQSMKDEDESPSGRRKRRSSISHFRSSSSADTKSLYSSSSSGFRTPPPYAHTPTK 183

Query: 185 NYKQIRNLLDQTRPAS--KNLGNVK----QNS---------------------------- 221
           +YK  R+  D  +  S  K+ GNVK    QN                             
Sbjct: 184 SYKDFRSYSDHKQVISLPKHNGNVKSTGLQNEILDDKRIADLSWLDEKFKFSDGFSEKSK 243

[Close]

BLAST of CmoCh18G011190 vs. NCBI nr
Match: gi|357487889|ref|XP_003614232.1| (plant/F4N2-9 protein, putative [Medicago truncatula])

HSP 1 Score: 134.4 bits (337), Expect = 2.4e-28
Identity = 104/244 (42.62%), Postives = 135/244 (55.33%), Query Frame = 1


Query: 20  HRRNASTELDVFEAARYFSGSNELI-YTNTSSFTHNIIREDHSSRRGGRMSLDLPLRTNA 79
           HRRN S ELDVFEA+RYFSG NE+I Y N+S+FT  I+RE+ +  + GR+SLD+P+R+  
Sbjct: 20  HRRNDSGELDVFEASRYFSGYNEVIGYNNSSTFTQKIMREERNGYK-GRISLDMPMRSLL 79

Query: 80  APPPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQSASQKKKKPKNGMKNDEFHHE 139
                   ++  +KEKKH +QPSSP GRLA+FLNSLFNQS S+KK K  +    DE    
Sbjct: 80  PQQFHGGIDQKQMKEKKHNKQPSSPGGRLASFLNSLFNQSTSKKKSKSSSQSMKDEDESP 139

Query: 140 IGARKRRSSL-----SSLIDSKS--SSN--------ISAPNKNYKQIRNLL-DQTRPAS- 199
            G R+RRSS+     SS  DS+S  S N        ++ P K  ++ + LL DQ    S 
Sbjct: 140 GGRRRRRSSISHFRSSSTADSRSIYSLNSGFRTPPYVNTPTKGCREFKTLLSDQKNEVSL 199

Query: 200 -----------------KNLGNVKQ--------NSDHPTRKIKDVDQDARSDSSSDLFEL 221
                            K   N+KQ              RK  +VD  A SDSSSDLFEL
Sbjct: 200 KKSSTTLQNELCWDDKKKRDSNLKQFVEKKYYEEEKREVRKFNEVDDGAESDSSSDLFEL 259

[Close]

BLAST of CmoCh18G011190 vs. NCBI nr
Match: gi|743798822|ref|XP_011011657.1| (PREDICTED: uncharacterized protein LOC105116143 [Populus euphratica])

HSP 1 Score: 134.0 bits (336), Expect = 3.1e-28
Identity = 95/197 (48.22%), Postives = 121/197 (61.42%), Query Frame = 1


Query: 5   THLSGNPDKIFHKPPHRRNASTELDVFEAARYFSGSNEL-IYTNTSSFTHNIIREDH-SS 64
           T LS +P K + K  HRRN S ELDVFEAARYFSG NE     N +++T  I+REDH +S
Sbjct: 4   TGLSSDPSKPYKKSLHRRNNSDELDVFEAARYFSGYNEAGAGYNGATYTQRIMREDHKNS 63

Query: 65  RRGGRMSLDLPLRTNAAP----PPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQS 124
            RGGRMSLD+P+R N  P      P+T EK  +KEKK++Q PSSP GRLA+FLNSLFNQ+
Sbjct: 64  WRGGRMSLDVPMR-NPLPHHLHQQPHTVEKQILKEKKYKQ-PSSPGGRLASFLNSLFNQT 123

Query: 125 ASQKKKKPK--NGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQ 184
           +S+KKK       MK+D+     G RKRRSS+S    S ++   S  + +    R     
Sbjct: 124 SSKKKKSKSTTQSMKDDD-ESPSGRRKRRSSISHFRSSSTTDTKSLYSSSSSGFRTPSPY 183

Query: 185 TRPASKNLGNVKQNSDH 194
           T P +K     +  SDH
Sbjct: 184 THPPTKGCKESRSYSDH 197

[Close]

BLAST of CmoCh18G011190 vs. NCBI nr
Match: gi|566191139|ref|XP_002314995.2| (hypothetical protein POPTR_0010s16385g [Populus trichocarpa])

HSP 1 Score: 131.0 bits (328), Expect = 2.7e-27
Identity = 93/197 (47.21%), Postives = 120/197 (60.91%), Query Frame = 1


Query: 5   THLSGNPDKIFHKPPHRRNASTELDVFEAARYFSGSNEL-IYTNTSSFTHNIIREDH-SS 64
           T LS +P K + K  HRRN S ELDVFEAARYFSG NE     N +++T  ++REDH +S
Sbjct: 4   TGLSSDPSKPYKKSLHRRNNSDELDVFEAARYFSGYNEAGAGYNGATYTQRVMREDHKNS 63

Query: 65  RRGGRMSLDLPLRTNAAP----PPPYTAEKPPIKEKKHRQQPSSPAGRLANFLNSLFNQS 124
            RGGRMSLD+P+R N  P      P+T EK  +KEKK++Q PSSP GRLA+FLNSLFNQ+
Sbjct: 64  WRGGRMSLDVPMR-NPLPHHIHQQPHTVEKQILKEKKYKQ-PSSPGGRLASFLNSLFNQT 123

Query: 125 ASQKKKKPK--NGMKNDEFHHEIGARKRRSSLSSLIDSKSSSNISAPNKNYKQIRNLLDQ 184
           +S+ KK       MK+D+     G RKRRSS+S    S ++   S  + +    R     
Sbjct: 124 SSKNKKSKSTTQSMKDDD-ESPGGRRKRRSSISHFRSSSTTDTKSLYSSSSSGFRTPSPY 183

Query: 185 TRPASKNLGNVKQNSDH 194
           T P +K     +  SDH
Sbjct: 184 THPPTKGCKESRSYSDH 197

The following BLAST results are available for this feature:

BLAST of CmoCh18G011190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BIG1E_ARATH	2.2e-13	32.74	Protein BIG GRAIN 1-like E OS=Arabidopsis thaliana GN=At1g69160 PE=2 SV=1	[more]

BLAST of CmoCh18G011190 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSX8_CUCSA	1.3e-60	59.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606790 PE=4 SV=1	[more]
A0A067L294_JATCU	3.4e-29	41.03	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15740 PE=4 SV=1	[more]
G7JX10_MEDTR	1.7e-28	42.62	Plant/F4N2-9 protein, putative OS=Medicago truncatula GN=MTR_5g046750 PE=4 SV=1	[more]
B9HXH6_POPTR	1.8e-27	47.21	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s16385g PE=4 SV=2	[more]
B9REB4_RICCO	5.4e-27	40.14	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1619950 PE=4 SV=1	[more]

BLAST of CmoCh18G011190 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69160.1	1.2e-14	32.74	unknown protein	[more]

BLAST of CmoCh18G011190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778705642\|ref\|XP_011655719.1\|	1.8e-60	59.18	PREDICTED: uncharacterized protein LOC105435577 [Cucumis sativus]	[more]
gi\|802568685\|ref\|XP_012067819.1\|	4.8e-29	41.03	PREDICTED: uncharacterized protein LOC105630573 [Jatropha curcas]	[more]
gi\|357487889\|ref\|XP_003614232.1\|	2.4e-28	42.62	plant/F4N2-9 protein, putative [Medicago truncatula]	[more]
gi\|743798822\|ref\|XP_011011657.1\|	3.1e-28	48.22	PREDICTED: uncharacterized protein LOC105116143 [Populus euphratica]	[more]
gi\|566191139\|ref\|XP_002314995.2\|	2.7e-27	47.21	hypothetical protein POPTR_0010s16385g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G011190.1	CmoCh18G011190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33541	FAMILY NOT NAMED	coord: 7..220 score: 3.1
None	No IPR available	PANTHER	PTHR33541:SF3	SUBFAMILY NOT NAMED	coord: 7..220 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh18G011190	Cucsa.284420	Cucumber (Gy14) v1	cgycmoB0789
CmoCh18G011190	CmaCh04G017100	Cucurbita maxima (Rimu)	cmacmoB709
CmoCh18G011190	Cla020311	Watermelon (97103) v1	cmowmB365
CmoCh18G011190	Cla022035	Watermelon (97103) v1	cmowmB359
CmoCh18G011190	Csa5G606790	Cucumber (Chinese Long) v2	cmocuB406
CmoCh18G011190	MELO3C011411	Melon (DHL92) v3.5.1	cmomeB367
CmoCh18G011190	MELO3C012160	Melon (DHL92) v3.5.1	cmomeB344
CmoCh18G011190	ClCG08G010520	Watermelon (Charleston Gray)	cmowcgB372
CmoCh18G011190	ClCG05G023610	Watermelon (Charleston Gray)	cmowcgB358
CmoCh18G011190	CSPI05G24420	Wild cucumber (PI 183967)	cmocpiB411
CmoCh18G011190	Lsi08G009050	Bottle gourd (USVL1VR-Ls)	cmolsiB382
CmoCh18G011190	Lsi04G003540	Bottle gourd (USVL1VR-Ls)	cmolsiB364
CmoCh18G011190	Cp4.1LG09g02370	Cucurbita pepo (Zucchini)	cmocpeB376
CmoCh18G011190	Cp4.1LG01g15200	Cucurbita pepo (Zucchini)	cmocpeB395
CmoCh18G011190	MELO3C012160.2	Melon (DHL92) v3.6.1	cmomedB395
CmoCh18G011190	MELO3C011411.2	Melon (DHL92) v3.6.1	cmomedB420
CmoCh18G011190	CsaV3_5G033410	Cucumber (Chinese Long) v3	cmocucB0487
CmoCh18G011190	Cla97C05G105590	Watermelon (97103) v2	cmowmbB403
CmoCh18G011190	Cla97C08G153370	Watermelon (97103) v2	cmowmbB417
CmoCh18G011190	Bhi07G001213	Wax gourd	cmowgoB0535
CmoCh18G011190	CsGy5G023920	Cucumber (Gy14) v2	cgybcmoB603
CmoCh18G011190	Carg14361	Silver-seed gourd	carcmoB0340
CmoCh18G011190	Carg17318	Silver-seed gourd	carcmoB0140

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh18G011190	CmoCh04G017960	Cucurbita moschata (Rifu)	cmocmoB340

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G011190	Silver-seed gourd	carcmoB0811
CmoCh18G011190	Cucumber (Chinese Long) v3	cmocucB0466
CmoCh18G011190	Watermelon (97103) v2	cmowmbB397
CmoCh18G011190	Watermelon (97103) v2	cmowmbB411
CmoCh18G011190	Wax gourd	cmowgoB0503
CmoCh18G011190	Wax gourd	cmowgoB0525
CmoCh18G011190	Cucurbita moschata (Rifu)	cmocmoB063
CmoCh18G011190	Cucumber (Gy14) v1	cgycmoB0265
CmoCh18G011190	Cucurbita maxima (Rimu)	cmacmoB088
CmoCh18G011190	Cucurbita maxima (Rimu)	cmacmoB406
CmoCh18G011190	Wild cucumber (PI 183967)	cmocpiB391
CmoCh18G011190	Cucumber (Chinese Long) v2	cmocuB391
CmoCh18G011190	Melon (DHL92) v3.5.1	cmomeB351
CmoCh18G011190	Melon (DHL92) v3.5.1	cmomeB361
CmoCh18G011190	Watermelon (Charleston Gray)	cmowcgB354
CmoCh18G011190	Watermelon (Charleston Gray)	cmowcgB364
CmoCh18G011190	Watermelon (97103) v1	cmowmB386
CmoCh18G011190	Watermelon (97103) v1	cmowmB396
CmoCh18G011190	Cucurbita pepo (Zucchini)	cmocpeB390
CmoCh18G011190	Bottle gourd (USVL1VR-Ls)	cmolsiB374
CmoCh18G011190	Bottle gourd (USVL1VR-Ls)	cmolsiB360
CmoCh18G011190	Cucumber (Gy14) v2	cgybcmoB092
CmoCh18G011190	Melon (DHL92) v3.6.1	cmomedB401
CmoCh18G011190	Melon (DHL92) v3.6.1	cmomedB412