CmoCh04G017960 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G017960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Plant/F4N2-9 protein, putative
Location	Cmo_Chr04 : 9034199 .. 9035029 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGTTACCAGCCAACTCTCCGGCAAGCCAAATAAGATCTTCAACAAATCACTTCACCGGCGGAAAGATTCCGGCGAGCTCGATGTCTTCGAAGCCGCCCGCTACTTCTCCGGCTACAATGAGCTCCATTACAACGCCGCCGCCGCCGCCGCCAGCTACGACACTTCCTTATTTTCTCAGAAGATCTTCAGAGAGGACGACGGCGGCTGGAGAGGCGGCAGAATGAGCCTCGACTTACCGATAAGAACCAACATAGTCCCTCTCCCGCAGCCGGAAAAACAAACAACCAAAGACCAAAAAAAACACCGGCAACAACCCAGCTCCCCCGGCGGCCGCCTCGCCAATTTCCTCAATTCCCTCTTCAACCAATCAGCTTCGAAAAAGAAAAAAAAACCCAAAAACCCCATAAAATCCGAAGATCTCCACGAAAATGGGGGAAGAAAGAGAAGAAGCAGCTTAAGTACGTTGATTGATTCAAAATCATCCTCAATTTATTCATCTTCCAACATTTCTGGATTCAGAACTCCACCAGCTCCCAATTGTACCGTACAAACACCCAACAAAAACTACAAGGAAATCAGAAGCCTTTTGGATCAAAAACGAACATCCTCCAAGAATCTCGGAAGTGGATATCATAAACAAAATCAATACGACATCAGAAAAATGAACGGCGTCGATGAAGGAGCTGAAAGTGATTCAAGCTCTGATCTTTTTGAGCTAAGGATCTGTGATTCAGATTGCGGCCTGCCAGTCTACGAATCCACAAACATTCAGACCATTAACAGACCAGATTTCATCCAATCTTATCCATCTATGAACAAATTGTAA

mRNA sequence

ATGTCCGTTACCAGCCAACTCTCCGGCAAGCCAAATAAGATCTTCAACAAATCACTTCACCGGCGGAAAGATTCCGGCGAGCTCGATGTCTTCGAAGCCGCCCGCTACTTCTCCGGCTACAATGAGCTCCATTACAACGCCGCCGCCGCCGCCGCCAGCTACGACACTTCCTTATTTTCTCAGAAGATCTTCAGAGAGGACGACGGCGGCTGGAGAGGCGGCAGAATGAGCCTCGACTTACCGATAAGAACCAACATAGTCCCTCTCCCGCAGCCGGAAAAACAAACAACCAAAGACCAAAAAAAACACCGGCAACAACCCAGCTCCCCCGGCGGCCGCCTCGCCAATTTCCTCAATTCCCTCTTCAACCAATCAGCTTCGAAAAAGAAAAAAAAACCCAAAAACCCCATAAAATCCGAAGATCTCCACGAAAATGGGGGAAGAAAGAGAAGAAGCAGCTTAAGTACGTTGATTGATTCAAAATCATCCTCAATTTATTCATCTTCCAACATTTCTGGATTCAGAACTCCACCAGCTCCCAATTGTACCGTACAAACACCCAACAAAAACTACAAGGAAATCAGAAGCCTTTTGGATCAAAAACGAACATCCTCCAAGAATCTCGGAAGTGGATATCATAAACAAAATCAATACGACATCAGAAAAATGAACGGCGTCGATGAAGGAGCTGAAAGTGATTCAAGCTCTGATCTTTTTGAGCTAAGGATCTGTGATTCAGATTGCGGCCTGCCAGTCTACGAATCCACAAACATTCAGACCATTAACAGACCAGATTTCATCCAATCTTATCCATCTATGAACAAATTGTAA

Coding sequence (CDS)

ATGTCCGTTACCAGCCAACTCTCCGGCAAGCCAAATAAGATCTTCAACAAATCACTTCACCGGCGGAAAGATTCCGGCGAGCTCGATGTCTTCGAAGCCGCCCGCTACTTCTCCGGCTACAATGAGCTCCATTACAACGCCGCCGCCGCCGCCGCCAGCTACGACACTTCCTTATTTTCTCAGAAGATCTTCAGAGAGGACGACGGCGGCTGGAGAGGCGGCAGAATGAGCCTCGACTTACCGATAAGAACCAACATAGTCCCTCTCCCGCAGCCGGAAAAACAAACAACCAAAGACCAAAAAAAACACCGGCAACAACCCAGCTCCCCCGGCGGCCGCCTCGCCAATTTCCTCAATTCCCTCTTCAACCAATCAGCTTCGAAAAAGAAAAAAAAACCCAAAAACCCCATAAAATCCGAAGATCTCCACGAAAATGGGGGAAGAAAGAGAAGAAGCAGCTTAAGTACGTTGATTGATTCAAAATCATCCTCAATTTATTCATCTTCCAACATTTCTGGATTCAGAACTCCACCAGCTCCCAATTGTACCGTACAAACACCCAACAAAAACTACAAGGAAATCAGAAGCCTTTTGGATCAAAAACGAACATCCTCCAAGAATCTCGGAAGTGGATATCATAAACAAAATCAATACGACATCAGAAAAATGAACGGCGTCGATGAAGGAGCTGAAAGTGATTCAAGCTCTGATCTTTTTGAGCTAAGGATCTGTGATTCAGATTGCGGCCTGCCAGTCTACGAATCCACAAACATTCAGACCATTAACAGACCAGATTTCATCCAATCTTATCCATCTATGAACAAATTGTAA

Homology

[Close]

BLAST of CmoCh04G017960 vs. Swiss-Prot
Match: BIG1E_ARATH (Protein BIG GRAIN 1-like E OS=Arabidopsis thaliana GN=At1g69160 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.6e-26
Identity = 125/330 (37.88%), Postives = 169/330 (51.21%), Query Frame = 1


Query: 1   MSVTSQLSGKPNKIFNK-SLHRRKDSGELDVFEAARYFSGYNELHYNAAAAAASYDTSLF 60
           MS+    S + +K+  + SL  +++S ELDVFEAA YF GYNE     A++     T  +
Sbjct: 1   MSMKGISSAESDKLSRRISLTHKRNSEELDVFEAAVYF-GYNE-----ASSGDHGHTQKY 60

Query: 61  SQKIFREDD-------GGWRGGRMSLDLPIRTN--IVPLPQP-----EKQTTKDQ--KKH 120
                RE++       GG  G R+SLDLPIR +  +  L Q      E  T K++     
Sbjct: 61  GYNAAREENPRRWGILGG--GRRISLDLPIRCSEQVYHLQQDHHEKHEVTTIKERLGNVR 120

Query: 121 RQQPSSPGGRLANFLNSLFNQSASKKKK-------KPKNPIKSEDLHENG--GRKRRSSL 180
            +QPSSPGG++A+FLNSLF+Q+ SKK K       KP +P   E++   G   R+RRSS+
Sbjct: 121 HKQPSSPGGKIASFLNSLFHQAGSKKNKSKSKSKTKPTDPEVEEEIPGGGWMRRRRRSSI 180

Query: 181 S--------------TLIDSKSSSIYSSSNISGFRTPPAPNCTVQTPNKNYKEI------ 240
           S              T   S S S+ SSS+ SGFRTPP     + TP KNYK+       
Sbjct: 181 SHFFSSSRSTSTTTTTTASSSSKSLISSSS-SGFRTPPP---YLNTPTKNYKQFLNYTSA 240

Query: 241 --------------RSLLDQK----RTSSKNLGSGYHKQNQYDIR--KMNGVDEGAESDS 264
                          S LD+K     + S+N       ++  D R  K  G D+G ESDS
Sbjct: 241 TKQVGEEETKTNKEYSWLDEKLKVMESLSENQRIWSDDEDIDDDRRIKREGEDDGMESDS 300

[Close]

BLAST of CmoCh04G017960 vs. Swiss-Prot
Match: BIG1A_ARATH (Protein BIG GRAIN 1-like A OS=Arabidopsis thaliana GN=At3g13980 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.5e-07
Identity = 66/191 (34.55%), Postives = 87/191 (45.55%), Query Frame = 1


Query: 102 KHRQQPSSPGGRLANFLNSLFNQSAS--KKKKKPKNPIKSEDLHENGGRKRRSSLSTLID 161
           K  +QP SPGGRLA FLNSLF  +A+  KK KK       E+ H +      SS S    
Sbjct: 163 KKVKQPISPGGRLATFLNSLFTNAATNPKKHKKTTTVAVVEEPHSSSTCSSASSFSRSCL 222

Query: 162 SKSSSIYSSS---------NI-----SGFRTPPAPNCTVQTPNKNYKEIRSLLDQKRT-- 221
           SK+ S    S         N+     S F  P A N      N   K +    + +R   
Sbjct: 223 SKTPSSSGKSKRSVRFCPVNVILDEDSSFTMPYAYNNERLYDNNEAKRVE---EHRRVIQ 282

Query: 222 SSKNLGSGYHKQNQYDIRKMNGVDEGAESD----SSSDLFELRICDSDCG-------LPV 264
           ++K+L   YH +N+     +N V+E  E D    +SSDLFEL    S  G       LPV
Sbjct: 283 AAKDLLRTYHNKNKVTTTNINNVEEDDEDDAASCASSDLFELENL-SAIGIERYREELPV 342

[Close]

BLAST of CmoCh04G017960 vs. TrEMBL
Match: A0A0A0KSX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606790 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 4.4e-87
Identity = 198/278 (71.22%), Postives = 213/278 (76.62%), Query Frame = 1


Query: 1   MSVTSQLSGKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAAASYDTSLFS 60
           MSVTS LSG P+KIF KSLHRRKDSGELDVFEAARYF+G NE  Y  AA   +Y+TSLF 
Sbjct: 1   MSVTSHLSGHPDKIFRKSLHRRKDSGELDVFEAARYFAGSNEPSYTTAA---TYETSLFH 60

Query: 61  QKIFREDDGGWRGGRMSLDLPIRTNIVPLPQP----EKQTTKDQKKHRQQPSSPGGRLAN 120
                   GG RGGRMSLDLP+RTN++PLP P    EKQ+ KD KKHRQQPSSPGGRLAN
Sbjct: 61  --------GGRRGGRMSLDLPLRTNVIPLPTPPYTAEKQSVKDPKKHRQQPSSPGGRLAN 120

Query: 121 FLNSLFNQSASKKKKKPKNPIKSEDLH-ENGGRKRRSSLSTLIDSKSSSIYSSSNISGFR 180
           FLNSLFNQSASKKKKKPKN IK+EDLH E G RKRRSSLSTLID+KSSS +SSS ISGFR
Sbjct: 121 FLNSLFNQSASKKKKKPKNSIKTEDLHHEMGARKRRSSLSTLIDTKSSS-HSSSKISGFR 180

Query: 181 TPPAPNC-TVQTPNKNYKEIRSLLDQKRTS----SKNLGSGYHKQNQYDIRKMNGVDEGA 240
           TPPAPNC TVQTPNKNY EIRS LDQKR      SK  G    K    ++RKMN  DEG 
Sbjct: 181 TPPAPNCCTVQTPNKNYMEIRSFLDQKREGINYYSKKNGINNQKS---EMRKMNDQDEGD 240

Query: 241 ESDSSSDLFELRICDS-DC----GLPVYESTNIQTINR 264
           ESDSSSDLFELRICD  DC     LPVY +TN QTIN+
Sbjct: 241 ESDSSSDLFELRICDRFDCYSSNELPVYRTTNFQTINK 263

[Close]

BLAST of CmoCh04G017960 vs. TrEMBL
Match: G7JX10_MEDTR (Plant/F4N2-9 protein, putative OS=Medicago truncatula GN=MTR_5g046750 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.6e-44
Identity = 136/293 (46.42%), Postives = 172/293 (58.70%), Query Frame = 1


Query: 17  KSLHRRKDSGELDVFEAARYFSGYNE-LHYNAAAAAASYDTSLFSQKIFREDDGGWRGGR 76
           KS HRR DSGELDVFEA+RYFSGYNE + YN        ++S F+QKI RE+  G++G R
Sbjct: 17  KSFHRRNDSGELDVFEASRYFSGYNEVIGYN--------NSSTFTQKIMREERNGYKG-R 76

Query: 77  MSLDLPIRTNIVPLPQPEK----QTTKDQKKHRQQPSSPGGRLANFLNSLFNQSASKKKK 136
           +SLD+P+R+    LPQ       Q    +KKH +QPSSPGGRLA+FLNSLFNQS SKKK 
Sbjct: 77  ISLDMPMRSL---LPQQFHGGIDQKQMKEKKHNKQPSSPGGRLASFLNSLFNQSTSKKKS 136

Query: 137 KPKN-PIKSEDLHENGGRKRRSSLSTLIDSK---SSSIYSSSNISGFRTPPAPNCTVQTP 196
           K  +  +K ED    G R+RRSS+S    S    S SIYS +  SGFRTPP     V TP
Sbjct: 137 KSSSQSMKDEDESPGGRRRRRSSISHFRSSSTADSRSIYSLN--SGFRTPP----YVNTP 196

Query: 197 NKNYKEIRSLL----------------------DQKRTSSKNL----GSGYHKQNQYDIR 256
            K  +E ++LL                      D K+    NL       Y+++ + ++R
Sbjct: 197 TKGCREFKTLLSDQKNEVSLKKSSTTLQNELCWDDKKKRDSNLKQFVEKKYYEEEKREVR 256

Query: 257 KMNGVDEGAESDSSSDLFELR---ICDSDCGLPVYESTNIQTINRPDFIQSYP 272
           K N VD+GAESDSSSDLFEL+   +     GLPVYE+TN+  I R   I + P
Sbjct: 257 KFNEVDDGAESDSSSDLFELQNYELSHYSSGLPVYETTNMDNIKRGSTISNVP 291

[Close]

BLAST of CmoCh04G017960 vs. TrEMBL
Match: M5XX97_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008554mg PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.7e-44
Identity = 147/319 (46.08%), Postives = 187/319 (58.62%), Query Frame = 1


Query: 4   TSQLSGKP--NKIFNKSLHRRKDSGELDVFEAARYFSGYNEL---HYNAAAAAASYDTSL 63
           T  LS  P  +KI  KS HRR DSGELDVFEAARYFSGYNE    H N      + +TS 
Sbjct: 6   TGVLSADPAADKIHKKSFHRRNDSGELDVFEAARYFSGYNEAPSSHNN------NTNTST 65

Query: 64  FSQKIFREDDGGWRGGRMSLDLPIRTNIVPLPQP-------------EKQTTKDQKKHRQ 123
           FSQK+ +ED   WRGGR+SLD+PIR +++  PQ              EKQ  KD+K   +
Sbjct: 66  FSQKMMKEDRS-WRGGRISLDIPIR-HMLHHPQQHPHHHHHHHHVVVEKQNVKDKK--YK 125

Query: 124 QPSSPGGRLANFLNSLFNQSASKKKKKPKNPIKS-EDLHE----NGGRKRRSSLSTLIDS 183
           QPSSPGGRLA+FLNSLFNQSASKKKK   +  +S +D HE     G R+RRSS+S    S
Sbjct: 126 QPSSPGGRLASFLNSLFNQSASKKKKSKSSTTQSMKDHHEEESPGGRRRRRSSISHFRSS 185

Query: 184 KSS---SIYSSSNISGFRTPPAPNCTVQTPNKNYKEIRSLLDQKRTS--------SKNLG 243
            ++   SIYSSS+ SGFRTPP  N      +K+ K++RS  D K+ +        SK L 
Sbjct: 186 STADAKSIYSSSS-SGFRTPPPYNYGQTAASKSCKDLRSYSDHKQQNLQQQVVSLSKELS 245

Query: 244 SGYHKQNQYD------------------IRKMNGV------DEGAESDSSSDLFELRICD 262
              H++ +Y                   +++++ V      DEGA+SDSSSDLFEL+  D
Sbjct: 246 WLDHEKFKYSNGLSEKYKISSDQDHKGLLKRLSEVVDDDDYDEGADSDSSSDLFELQNYD 305

[Close]

BLAST of CmoCh04G017960 vs. TrEMBL
Match: A0A067L294_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15740 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.1e-42
Identity = 141/327 (43.12%), Postives = 183/327 (55.96%), Query Frame = 1


Query: 1   MSVTSQLSGKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAAASYDTSLFS 60
           MS+T  LS   +K++ K+ H R DS ELDVFEAARYFSGYNE         + Y+ + ++
Sbjct: 1   MSITG-LSSDTSKLYKKTFHLRNDSDELDVFEAARYFSGYNE--------GSGYNGASYT 60

Query: 61  QKIFRED-DGGWRGGRMSLDLPIRTNIVPLPQPEKQTTKDQ---KKHRQQPSSPGGRLAN 120
           QK+ +ED    WRGGRMSLD+P+RT   PLP  + +T + Q   +K  +QPSSPGGRLA+
Sbjct: 61  QKVIKEDYRHQWRGGRMSLDVPMRT---PLPHQQSKTVEKQILKEKKYKQPSSPGGRLAS 120

Query: 121 FLNSLFNQSASKKKKKPKNP--IKSEDLHENGGRKRRSSLSTLIDSKSS---SIYSSSNI 180
           FLNSLFNQ++SKKKK       +K ED   +G RKRRSS+S    S S+   S+YSSS+ 
Sbjct: 121 FLNSLFNQTSSKKKKSKSTTQSMKDEDESPSGRRKRRSSISHFRSSSSADTKSLYSSSS- 180

Query: 181 SGFRTPPAPNCTVQTPNK---------NYKEIRSL----------------LDQKRTS-- 240
           SGFRTPP       TP K         ++K++ SL                LD KR +  
Sbjct: 181 SGFRTPPP---YAHTPTKSYKDFRSYSDHKQVISLPKHNGNVKSTGLQNEILDDKRIADL 240

Query: 241 ----------------SKNLGS-----------GYHKQNQYDIRKMNGVDEGAESDSSSD 262
                           SKNLGS             +   + + RK N VD+GAESDSSSD
Sbjct: 241 SWLDEKFKFSDGFSEKSKNLGSLKYIEKDRIWVDQYPSEEKEFRKFNEVDDGAESDSSSD 300

[Close]

BLAST of CmoCh04G017960 vs. TrEMBL
Match: A0A0D2U506_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G175700 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.2e-38
Identity = 119/270 (44.07%), Postives = 160/270 (59.26%), Query Frame = 1


Query: 8   SGKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAAASYDT-SLFSQKIFRE 67
           S  P+ +  KS H R  SGELDVFEAARYFSGYNE        AASY+  +L SQK+ R+
Sbjct: 75  SFNPDTMLKKSFHHRNGSGELDVFEAARYFSGYNE--------AASYNCGTLISQKVTRD 134

Query: 68  DDGGWRGGRMSLDLPIRTNIVPLPQPEKQTTKDQKKHRQQPSSPGGRLANFLNSLFNQSA 127
           +    +G R+SLD+ +R N +       +    +KKH+ QPSSPGG+LA FLNSLFNQ+ 
Sbjct: 135 ERQPLKGDRISLDVAMRRNPLLHQSHLVEKHAKEKKHK-QPSSPGGKLATFLNSLFNQTG 194

Query: 128 SKKKKKPKN---PIKSEDLHENGGRKRRSSLSTLIDSK---SSSIYSSSNISGFRTPPAP 187
           SKKKK  K+    +K E++   G RKRR S+S    S    + S YSSS+ SGFRTPP  
Sbjct: 195 SKKKKNSKSTTQSMKDEEVSPAGRRKRRISISHFRSSNTVDTKSFYSSSS-SGFRTPPPY 254

Query: 188 NCTVQTPNKNYKEIRSLLDQKRT-------SSKNLGSGYHKQNQYDIRKMNGVDEGAESD 247
             T    N+  K I   L++ +         + N+    ++  + D  K+  VD+GA+SD
Sbjct: 255 TATPTKRNETSKLIDGFLEKYKNIEPHHQDKNMNIRVDRYQSEEKDFSKLCEVDDGADSD 314

Query: 248 SSSDLFELRICDSDCGLPVYESTNIQTINR 264
           SSSDLFEL+   S  GLPV+E+TN+ +  R
Sbjct: 315 SSSDLFELQSYSS--GLPVFETTNMDSFKR 332

[Close]

BLAST of CmoCh04G017960 vs. TAIR10
Match: AT1G69160.1 (AT1G69160.1 unknown protein)

HSP 1 Score: 120.2 bits (300), Expect = 2.1e-27
Identity = 125/330 (37.88%), Postives = 169/330 (51.21%), Query Frame = 1


Query: 1   MSVTSQLSGKPNKIFNK-SLHRRKDSGELDVFEAARYFSGYNELHYNAAAAAASYDTSLF 60
           MS+    S + +K+  + SL  +++S ELDVFEAA YF GYNE     A++     T  +
Sbjct: 1   MSMKGISSAESDKLSRRISLTHKRNSEELDVFEAAVYF-GYNE-----ASSGDHGHTQKY 60

Query: 61  SQKIFREDD-------GGWRGGRMSLDLPIRTN--IVPLPQP-----EKQTTKDQ--KKH 120
                RE++       GG  G R+SLDLPIR +  +  L Q      E  T K++     
Sbjct: 61  GYNAAREENPRRWGILGG--GRRISLDLPIRCSEQVYHLQQDHHEKHEVTTIKERLGNVR 120

Query: 121 RQQPSSPGGRLANFLNSLFNQSASKKKK-------KPKNPIKSEDLHENG--GRKRRSSL 180
            +QPSSPGG++A+FLNSLF+Q+ SKK K       KP +P   E++   G   R+RRSS+
Sbjct: 121 HKQPSSPGGKIASFLNSLFHQAGSKKNKSKSKSKTKPTDPEVEEEIPGGGWMRRRRRSSI 180

Query: 181 S--------------TLIDSKSSSIYSSSNISGFRTPPAPNCTVQTPNKNYKEI------ 240
           S              T   S S S+ SSS+ SGFRTPP     + TP KNYK+       
Sbjct: 181 SHFFSSSRSTSTTTTTTASSSSKSLISSSS-SGFRTPPP---YLNTPTKNYKQFLNYTSA 240

Query: 241 --------------RSLLDQK----RTSSKNLGSGYHKQNQYDIR--KMNGVDEGAESDS 264
                          S LD+K     + S+N       ++  D R  K  G D+G ESDS
Sbjct: 241 TKQVGEEETKTNKEYSWLDEKLKVMESLSENQRIWSDDEDIDDDRRIKREGEDDGMESDS 300

[Close]

BLAST of CmoCh04G017960 vs. TAIR10
Match: AT3G13980.1 (AT3G13980.1 unknown protein)

HSP 1 Score: 56.2 bits (134), Expect = 3.6e-08
Identity = 66/191 (34.55%), Postives = 87/191 (45.55%), Query Frame = 1


Query: 102 KHRQQPSSPGGRLANFLNSLFNQSAS--KKKKKPKNPIKSEDLHENGGRKRRSSLSTLID 161
           K  +QP SPGGRLA FLNSLF  +A+  KK KK       E+ H +      SS S    
Sbjct: 163 KKVKQPISPGGRLATFLNSLFTNAATNPKKHKKTTTVAVVEEPHSSSTCSSASSFSRSCL 222

Query: 162 SKSSSIYSSS---------NI-----SGFRTPPAPNCTVQTPNKNYKEIRSLLDQKRT-- 221
           SK+ S    S         N+     S F  P A N      N   K +    + +R   
Sbjct: 223 SKTPSSSGKSKRSVRFCPVNVILDEDSSFTMPYAYNNERLYDNNEAKRVE---EHRRVIQ 282

Query: 222 SSKNLGSGYHKQNQYDIRKMNGVDEGAESD----SSSDLFELRICDSDCG-------LPV 264
           ++K+L   YH +N+     +N V+E  E D    +SSDLFEL    S  G       LPV
Sbjct: 283 AAKDLLRTYHNKNKVTTTNINNVEEDDEDDAASCASSDLFELENL-SAIGIERYREELPV 342

[Close]

BLAST of CmoCh04G017960 vs. NCBI nr
Match: gi|778705642|ref|XP_011655719.1| (PREDICTED: uncharacterized protein LOC105435577 [Cucumis sativus])

HSP 1 Score: 329.3 bits (843), Expect = 6.3e-87
Identity = 198/278 (71.22%), Postives = 213/278 (76.62%), Query Frame = 1


Query: 1   MSVTSQLSGKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAAASYDTSLFS 60
           MSVTS LSG P+KIF KSLHRRKDSGELDVFEAARYF+G NE  Y  AA   +Y+TSLF 
Sbjct: 1   MSVTSHLSGHPDKIFRKSLHRRKDSGELDVFEAARYFAGSNEPSYTTAA---TYETSLFH 60

Query: 61  QKIFREDDGGWRGGRMSLDLPIRTNIVPLPQP----EKQTTKDQKKHRQQPSSPGGRLAN 120
                   GG RGGRMSLDLP+RTN++PLP P    EKQ+ KD KKHRQQPSSPGGRLAN
Sbjct: 61  --------GGRRGGRMSLDLPLRTNVIPLPTPPYTAEKQSVKDPKKHRQQPSSPGGRLAN 120

Query: 121 FLNSLFNQSASKKKKKPKNPIKSEDLH-ENGGRKRRSSLSTLIDSKSSSIYSSSNISGFR 180
           FLNSLFNQSASKKKKKPKN IK+EDLH E G RKRRSSLSTLID+KSSS +SSS ISGFR
Sbjct: 121 FLNSLFNQSASKKKKKPKNSIKTEDLHHEMGARKRRSSLSTLIDTKSSS-HSSSKISGFR 180

Query: 181 TPPAPNC-TVQTPNKNYKEIRSLLDQKRTS----SKNLGSGYHKQNQYDIRKMNGVDEGA 240
           TPPAPNC TVQTPNKNY EIRS LDQKR      SK  G    K    ++RKMN  DEG 
Sbjct: 181 TPPAPNCCTVQTPNKNYMEIRSFLDQKREGINYYSKKNGINNQKS---EMRKMNDQDEGD 240

Query: 241 ESDSSSDLFELRICDS-DC----GLPVYESTNIQTINR 264
           ESDSSSDLFELRICD  DC     LPVY +TN QTIN+
Sbjct: 241 ESDSSSDLFELRICDRFDCYSSNELPVYRTTNFQTINK 263

[Close]

BLAST of CmoCh04G017960 vs. NCBI nr
Match: gi|357487889|ref|XP_003614232.1| (plant/F4N2-9 protein, putative [Medicago truncatula])

HSP 1 Score: 188.0 bits (476), Expect = 2.3e-44
Identity = 136/293 (46.42%), Postives = 172/293 (58.70%), Query Frame = 1


Query: 17  KSLHRRKDSGELDVFEAARYFSGYNE-LHYNAAAAAASYDTSLFSQKIFREDDGGWRGGR 76
           KS HRR DSGELDVFEA+RYFSGYNE + YN        ++S F+QKI RE+  G++G R
Sbjct: 17  KSFHRRNDSGELDVFEASRYFSGYNEVIGYN--------NSSTFTQKIMREERNGYKG-R 76

Query: 77  MSLDLPIRTNIVPLPQPEK----QTTKDQKKHRQQPSSPGGRLANFLNSLFNQSASKKKK 136
           +SLD+P+R+    LPQ       Q    +KKH +QPSSPGGRLA+FLNSLFNQS SKKK 
Sbjct: 77  ISLDMPMRSL---LPQQFHGGIDQKQMKEKKHNKQPSSPGGRLASFLNSLFNQSTSKKKS 136

Query: 137 KPKN-PIKSEDLHENGGRKRRSSLSTLIDSK---SSSIYSSSNISGFRTPPAPNCTVQTP 196
           K  +  +K ED    G R+RRSS+S    S    S SIYS +  SGFRTPP     V TP
Sbjct: 137 KSSSQSMKDEDESPGGRRRRRSSISHFRSSSTADSRSIYSLN--SGFRTPP----YVNTP 196

Query: 197 NKNYKEIRSLL----------------------DQKRTSSKNL----GSGYHKQNQYDIR 256
            K  +E ++LL                      D K+    NL       Y+++ + ++R
Sbjct: 197 TKGCREFKTLLSDQKNEVSLKKSSTTLQNELCWDDKKKRDSNLKQFVEKKYYEEEKREVR 256

Query: 257 KMNGVDEGAESDSSSDLFELR---ICDSDCGLPVYESTNIQTINRPDFIQSYP 272
           K N VD+GAESDSSSDLFEL+   +     GLPVYE+TN+  I R   I + P
Sbjct: 257 KFNEVDDGAESDSSSDLFELQNYELSHYSSGLPVYETTNMDNIKRGSTISNVP 291

[Close]

BLAST of CmoCh04G017960 vs. NCBI nr
Match: gi|596145867|ref|XP_007222646.1| (hypothetical protein PRUPE_ppa008554mg [Prunus persica])

HSP 1 Score: 187.2 bits (474), Expect = 3.9e-44
Identity = 147/319 (46.08%), Postives = 187/319 (58.62%), Query Frame = 1


Query: 4   TSQLSGKP--NKIFNKSLHRRKDSGELDVFEAARYFSGYNEL---HYNAAAAAASYDTSL 63
           T  LS  P  +KI  KS HRR DSGELDVFEAARYFSGYNE    H N      + +TS 
Sbjct: 6   TGVLSADPAADKIHKKSFHRRNDSGELDVFEAARYFSGYNEAPSSHNN------NTNTST 65

Query: 64  FSQKIFREDDGGWRGGRMSLDLPIRTNIVPLPQP-------------EKQTTKDQKKHRQ 123
           FSQK+ +ED   WRGGR+SLD+PIR +++  PQ              EKQ  KD+K   +
Sbjct: 66  FSQKMMKEDRS-WRGGRISLDIPIR-HMLHHPQQHPHHHHHHHHVVVEKQNVKDKK--YK 125

Query: 124 QPSSPGGRLANFLNSLFNQSASKKKKKPKNPIKS-EDLHE----NGGRKRRSSLSTLIDS 183
           QPSSPGGRLA+FLNSLFNQSASKKKK   +  +S +D HE     G R+RRSS+S    S
Sbjct: 126 QPSSPGGRLASFLNSLFNQSASKKKKSKSSTTQSMKDHHEEESPGGRRRRRSSISHFRSS 185

Query: 184 KSS---SIYSSSNISGFRTPPAPNCTVQTPNKNYKEIRSLLDQKRTS--------SKNLG 243
            ++   SIYSSS+ SGFRTPP  N      +K+ K++RS  D K+ +        SK L 
Sbjct: 186 STADAKSIYSSSS-SGFRTPPPYNYGQTAASKSCKDLRSYSDHKQQNLQQQVVSLSKELS 245

Query: 244 SGYHKQNQYD------------------IRKMNGV------DEGAESDSSSDLFELRICD 262
              H++ +Y                   +++++ V      DEGA+SDSSSDLFEL+  D
Sbjct: 246 WLDHEKFKYSNGLSEKYKISSDQDHKGLLKRLSEVVDDDDYDEGADSDSSSDLFELQNYD 305

[Close]

BLAST of CmoCh04G017960 vs. NCBI nr
Match: gi|802568685|ref|XP_012067819.1| (PREDICTED: uncharacterized protein LOC105630573 [Jatropha curcas])

HSP 1 Score: 181.8 bits (460), Expect = 1.6e-42
Identity = 141/327 (43.12%), Postives = 183/327 (55.96%), Query Frame = 1


Query: 1   MSVTSQLSGKPNKIFNKSLHRRKDSGELDVFEAARYFSGYNELHYNAAAAAASYDTSLFS 60
           MS+T  LS   +K++ K+ H R DS ELDVFEAARYFSGYNE         + Y+ + ++
Sbjct: 1   MSITG-LSSDTSKLYKKTFHLRNDSDELDVFEAARYFSGYNE--------GSGYNGASYT 60

Query: 61  QKIFRED-DGGWRGGRMSLDLPIRTNIVPLPQPEKQTTKDQ---KKHRQQPSSPGGRLAN 120
           QK+ +ED    WRGGRMSLD+P+RT   PLP  + +T + Q   +K  +QPSSPGGRLA+
Sbjct: 61  QKVIKEDYRHQWRGGRMSLDVPMRT---PLPHQQSKTVEKQILKEKKYKQPSSPGGRLAS 120

Query: 121 FLNSLFNQSASKKKKKPKNP--IKSEDLHENGGRKRRSSLSTLIDSKSS---SIYSSSNI 180
           FLNSLFNQ++SKKKK       +K ED   +G RKRRSS+S    S S+   S+YSSS+ 
Sbjct: 121 FLNSLFNQTSSKKKKSKSTTQSMKDEDESPSGRRKRRSSISHFRSSSSADTKSLYSSSS- 180

Query: 181 SGFRTPPAPNCTVQTPNK---------NYKEIRSL----------------LDQKRTS-- 240
           SGFRTPP       TP K         ++K++ SL                LD KR +  
Sbjct: 181 SGFRTPPP---YAHTPTKSYKDFRSYSDHKQVISLPKHNGNVKSTGLQNEILDDKRIADL 240

Query: 241 ----------------SKNLGS-----------GYHKQNQYDIRKMNGVDEGAESDSSSD 262
                           SKNLGS             +   + + RK N VD+GAESDSSSD
Sbjct: 241 SWLDEKFKFSDGFSEKSKNLGSLKYIEKDRIWVDQYPSEEKEFRKFNEVDDGAESDSSSD 300

[Close]

BLAST of CmoCh04G017960 vs. NCBI nr
Match: gi|658009161|ref|XP_008339782.1| (PREDICTED: uncharacterized protein DDB_G0271670-like [Malus domestica])

HSP 1 Score: 177.9 bits (450), Expect = 2.4e-41
Identity = 141/325 (43.38%), Postives = 181/325 (55.69%), Query Frame = 1


Query: 4   TSQLSGKP--NKIFNKSLHRRKDSGELDVFEAARYFSGYNEL---HYNAAAAAASYDTSL 63
           T  LS  P  +KI  KS H R DSGELDVFEAARYFSGY E    H N  ++    +TS 
Sbjct: 58  TGVLSADPGADKIHKKSFHHRNDSGELDVFEAARYFSGYIEAPSSHNNNXSS----NTSA 117

Query: 64  FSQKIFREDDGGWRGGRMSLDLPIRTNIVPLPQP----------EKQTTKDQKKHRQQPS 123
           FSQ++ +ED   WRGGR+SLD+PIR +++  PQ           EKQ     KK++Q PS
Sbjct: 118 FSQRMMKEDRSSWRGGRISLDMPIR-HMLHHPQQNPNHHNHVAVEKQNNIKDKKYKQ-PS 177

Query: 124 SPGGRLANFLNSLFNQSASKKKKKPKNP---IKSEDLHENGGRKRRSSLSTLIDSKSS-- 183
           SPGGRLA+FLNSLFNQSASKKKK   +    +K E+    G R RRSS+S    S ++  
Sbjct: 178 SPGGRLASFLNSLFNQSASKKKKSKSSATQSMKDEEESPGGRRXRRSSISHFRSSSTTDA 237

Query: 184 -SIYSSSNISGFRTPPAPNCTVQTPNKNYKEIRSL-----------------------LD 243
            S+YSSS+ SGFRTPP  +      +K+YK++RS                         D
Sbjct: 238 KSVYSSSS-SGFRTPPPYSHAQTAASKSYKDLRSYSDNHKQQYQHQQQAVSLSKYNTNFD 297

Query: 244 QKRTSSKNL----------GSGYHKQNQYD----IRKMNGV------DEGAESDSSSDLF 262
            KR+S+K L             Y   ++ D    +++++ V      DEGAESDSSSDLF
Sbjct: 298 XKRSSNKELTWLDHEKFKLSEKYKISSELDHKGLLKRLSEVVDDEEEDEGAESDSSSDLF 357

The following BLAST results are available for this feature:

BLAST of CmoCh04G017960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BIG1E_ARATH	3.6e-26	37.88	Protein BIG GRAIN 1-like E OS=Arabidopsis thaliana GN=At1g69160 PE=2 SV=1	[more]
BIG1A_ARATH	6.5e-07	34.55	Protein BIG GRAIN 1-like A OS=Arabidopsis thaliana GN=At3g13980 PE=3 SV=1	[more]

BLAST of CmoCh04G017960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSX8_CUCSA	4.4e-87	71.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606790 PE=4 SV=1	[more]
G7JX10_MEDTR	1.6e-44	46.42	Plant/F4N2-9 protein, putative OS=Medicago truncatula GN=MTR_5g046750 PE=4 SV=1	[more]
M5XX97_PRUPE	2.7e-44	46.08	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008554mg PE=4 SV=1	[more]
A0A067L294_JATCU	1.1e-42	43.12	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15740 PE=4 SV=1	[more]
A0A0D2U506_GOSRA	2.2e-38	44.07	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G175700 PE=4 SV=1	[more]

BLAST of CmoCh04G017960 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69160.1	2.1e-27	37.88	unknown protein	[more]
AT3G13980.1	3.6e-08	34.55	unknown protein	[more]

BLAST of CmoCh04G017960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778705642\|ref\|XP_011655719.1\|	6.3e-87	71.22	PREDICTED: uncharacterized protein LOC105435577 [Cucumis sativus]	[more]
gi\|357487889\|ref\|XP_003614232.1\|	2.3e-44	46.42	plant/F4N2-9 protein, putative [Medicago truncatula]	[more]
gi\|596145867\|ref\|XP_007222646.1\|	3.9e-44	46.08	hypothetical protein PRUPE_ppa008554mg [Prunus persica]	[more]
gi\|802568685\|ref\|XP_012067819.1\|	1.6e-42	43.12	PREDICTED: uncharacterized protein LOC105630573 [Jatropha curcas]	[more]
gi\|658009161\|ref\|XP_008339782.1\|	2.4e-41	43.38	PREDICTED: uncharacterized protein DDB_G0271670-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G017960.1	CmoCh04G017960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33541	FAMILY NOT NAMED	coord: 11..273 score: 7.7
None	No IPR available	PANTHER	PTHR33541:SF3	SUBFAMILY NOT NAMED	coord: 11..273 score: 7.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G017960	Cucsa.284420	Cucumber (Gy14) v1	cgycmoB0797
CmoCh04G017960	CmaCh04G017100	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G017960	Cla020311	Watermelon (97103) v1	cmowmB698
CmoCh04G017960	Csa5G606790	Cucumber (Chinese Long) v2	cmocuB715
CmoCh04G017960	MELO3C012160	Melon (DHL92) v3.5.1	cmomeB645
CmoCh04G017960	ClCG05G023610	Watermelon (Charleston Gray)	cmowcgB659
CmoCh04G017960	CSPI05G24420	Wild cucumber (PI 183967)	cmocpiB723
CmoCh04G017960	Lsi04G003540	Bottle gourd (USVL1VR-Ls)	cmolsiB671
CmoCh04G017960	Cp4.1LG09g02370	Cucurbita pepo (Zucchini)	cmocpeB647
CmoCh04G017960	Cp4.1LG01g15200	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G017960	MELO3C012160.2	Melon (DHL92) v3.6.1	cmomedB735
CmoCh04G017960	CsaV3_5G033410	Cucumber (Chinese Long) v3	cmocucB0847
CmoCh04G017960	Cla97C05G105590	Watermelon (97103) v2	cmowmbB734
CmoCh04G017960	Bhi07G001213	Wax gourd	cmowgoB0903
CmoCh04G017960	CsGy5G023920	Cucumber (Gy14) v2	cgybcmoB627
CmoCh04G017960	Carg14361	Silver-seed gourd	carcmoB0343
CmoCh04G017960	Carg17318	Silver-seed gourd	carcmoB0142

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G017960	CmoCh18G011190	Cucurbita moschata (Rifu)	cmocmoB340

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G017960	Cucumber (Chinese Long) v3	cmocucB0799
CmoCh04G017960	Watermelon (97103) v2	cmowmbB726
CmoCh04G017960	Watermelon (97103) v2	cmowmbB747
CmoCh04G017960	Wax gourd	cmowgoB0885
CmoCh04G017960	Cucurbita moschata (Rifu)	cmocmoB188
CmoCh04G017960	Cucurbita maxima (Rimu)	cmacmoB423
CmoCh04G017960	Wild cucumber (PI 183967)	cmocpiB685
CmoCh04G017960	Cucumber (Chinese Long) v2	cmocuB674
CmoCh04G017960	Melon (DHL92) v3.5.1	cmomeB663
CmoCh04G017960	Melon (DHL92) v3.5.1	cmomeB666
CmoCh04G017960	Watermelon (Charleston Gray)	cmowcgB652
CmoCh04G017960	Watermelon (97103) v1	cmowmB716
CmoCh04G017960	Watermelon (97103) v1	cmowmB741
CmoCh04G017960	Bottle gourd (USVL1VR-Ls)	cmolsiB633
CmoCh04G017960	Cucumber (Gy14) v2	cgybcmoB120
CmoCh04G017960	Melon (DHL92) v3.6.1	cmomedB749
CmoCh04G017960	Melon (DHL92) v3.6.1	cmomedB753