Cp4.1LG01g13870 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g13870
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAuxin-responsive protein
LocationCp4.1LG01 : 7996970 .. 7998132 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAGGGCTTTGTTGTCCCCCTCCCCCCTTGCCTTAAGGTCCCTACATCCCCATCATCCCCATATCCCATATAAATAATATGCATATAAACCCCCAATTTCTTTACCCAAAGCCCATTTGAGATAATGGAGCCTAATCAGTTCTCTGTTTACTGTGAAGGGAAAGGGGAGAATGGGAGCATAGATTTGGGGCTGAGCCTGAGAACGCTGCAGCCAGAGGTGGTGGGATCAATAGAAGGGTATGGGGAGGAGGATGAGCATGGGATCAACTGGGGGGCGGCGGATCATACGGCGGCGGATCTGTACATGAACATCAACATGAACATGAAACATAATAATAATGGAGTAGTAGTAGTAGAACAGGATTACTACTGTTGTGAGGAGGAGGAGGAGGAGGCAGAGGAGGTGGTGCAGAGCAAACACCAGCGCTGGGCTTATGTCAAAGTCAATATGGATGGTGTCATTGTTGGTAGAAAAGTTTGCATCTTTCAACATGGCTCCTATTCCAGCCTCGCGCTTCAGCTCGAAGACATGTTTGGTATGTTTCATTTCTTTCTGTCGATCACTTAACTATGTTTGAATCCGCTTTTAATTCATAACTTGACGTGTTATGGAGTGGACAAAGCNGATCTTTTTTTTTTTTTTTTTTTGTTGGTTAGATTAGTTTGAAATACTTACACTGGCTATGTTTATTGGTGGGATCAGGTCGACAATGTGAATCTGGATTGAAATTGTTTGAGAATGAATCTGAATTCTCACTATTTTACAAAGATGGAGACGAAAATTGGAGGAGTGTCGGTGACGTACCGTGGAAGTAAGTTTATAACAACGGTTTGTTTAATCGAATCAAATTAATTTGAATCTGTTTTAAATTTTTGATCTAATTTGGTGACTTGGCTTTGTTGGGAAACGGACAGGCAATTCGTGGAGGATGTAAAGAGGCTGAGAATTGCTCGGAAAGATGAGGGTTTTGTTGCCATTCATCAAAATTAACTTAAATTTCTTAATGGAATTATATTTTGTGTTACGTTGGAAGCTTTGGATAAATTATCTAATTTTAAGGAACCTTTTATAACAAAATCTTCCAATTATTTGTTTTTATATTATATACTTTTATCTCTCATTCCTCGATTTGATGATTTATGTTCAACGGGTAACCTAAAT

mRNA sequence

AAGAGGGCTTTGTTGTCCCCCTCCCCCCTTGCCTTAAGGTCCCTACATCCCCATCATCCCCATATCCCATATAAATAATATGCATATAAACCCCCAATTTCTTTACCCAAAGCCCATTTGAGATAATGGAGCCTAATCAGTTCTCTGTTTACTGTGAAGGGAAAGGGGAGAATGGGAGCATAGATTTGGGGCTGAGCCTGAGAACGCTGCAGCCAGAGGTGGTGGGATCAATAGAAGGGTATGGGGAGGAGGATGAGCATGGGATCAACTGGGGGGCGGCGGATCATACGGCGGCGGATCTGTACATGAACATCAACATGAACATGAAACATAATAATAATGGAGTAGTAGTAGTAGAACAGGATTACTACTGTTGTGAGGAGGAGGAGGAGGAGGCAGAGGAGGTGGTGCAGAGCAAACACCAGCGCTGGGCTTATGTCAAAGTCAATATGGATGGTGTCATTGTTGGTAGAAAAGTTTGCATCTTTCAACATGGCTCCTATTCCAGCCTCGCGCTTCAGCTCGAAGACATGTTTGGTCGACAATGTGAATCTGGATTGAAATTGTTTGAGAATGAATCTGAATTCTCACTATTTTACAAAGATGGAGACGAAAATTGGAGGAGTGTCGGTGACGTACCGTGGAAGCAATTCGTGGAGGATGTAAAGAGGCTGAGAATTGCTCGGAAAGATGAGGGTTTTGTTGCCATTCATCAAAATTAACTTAAATTTCTTAATGGAATTATATTTTGTGTTACGTTGGAAGCTTTGGATAAATTATCTAATTTTAAGGAACCTTTTATAACAAAATCTTCCAATTATTTGTTTTTATATTATATACTTTTATCTCTCATTCCTCGATTTGATGATTTATGTTCAACGGGTAACCTAAAT

Coding sequence (CDS)

ATGGAGCCTAATCAGTTCTCTGTTTACTGTGAAGGGAAAGGGGAGAATGGGAGCATAGATTTGGGGCTGAGCCTGAGAACGCTGCAGCCAGAGGTGGTGGGATCAATAGAAGGGTATGGGGAGGAGGATGAGCATGGGATCAACTGGGGGGCGGCGGATCATACGGCGGCGGATCTGTACATGAACATCAACATGAACATGAAACATAATAATAATGGAGTAGTAGTAGTAGAACAGGATTACTACTGTTGTGAGGAGGAGGAGGAGGAGGCAGAGGAGGTGGTGCAGAGCAAACACCAGCGCTGGGCTTATGTCAAAGTCAATATGGATGGTGTCATTGTTGGTAGAAAAGTTTGCATCTTTCAACATGGCTCCTATTCCAGCCTCGCGCTTCAGCTCGAAGACATGTTTGGTCGACAATGTGAATCTGGATTGAAATTGTTTGAGAATGAATCTGAATTCTCACTATTTTACAAAGATGGAGACGAAAATTGGAGGAGTGTCGGTGACGTACCGTGGAAGCAATTCGTGGAGGATGTAAAGAGGCTGAGAATTGCTCGGAAAGATGAGGGTTTTGTTGCCATTCATCAAAATTAA

Protein sequence

MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLYMNINMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDEGFVAIHQN
Homology
[Close]
BLAST of Cp4.1LG01g13870 vs. Swiss-Prot
Match: IAA32_ARATH (Auxin-responsive protein IAA32 OS=Arabidopsis thaliana GN=IAA32 PE=2 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 6.9e-35
Identity = 85/191 (44.50%), Postives = 115/191 (60.21%), Query Frame = 1 

Query: 9   YCEGKGENGSIDLGLSLRTLQPEV------VGSIEGYGEEDEHGINWGAADHTAADLYMN 68
           Y + K   G IDLGLSLRT+Q E       +  ++GYGE     I+W    +       N
Sbjct: 20  YSQTKKGGGVIDLGLSLRTIQHETYLPPARMIGLDGYGEL----IDWSQPSY-------N 79

Query: 69  INMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQ 128
               +K  + G   + Q YY  E E             ++AYVKVN+DG++VGRKVC+  
Sbjct: 80  SITQLKSEDTGHQRLAQGYYNNEGESRG----------KYAYVKVNLDGLVVGRKVCLVD 139

Query: 129 HGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKR 188
            G+Y++LALQL DMFG Q  SGL+LF+ ESEFSL Y+D +  WR+VGDVPWK+FVE V R
Sbjct: 140 QGAYATLALQLNDMFGMQTVSGLRLFQTESEFSLVYRDREGIWRNVGDVPWKEFVESVDR 189

Query: 189 LRIARKDEGFV 194
           +RIAR+++  +
Sbjct: 200 MRIARRNDALL 189

[Close]
BLAST of Cp4.1LG01g13870 vs. Swiss-Prot
Match: IAA34_ARATH (Auxin-responsive protein IAA34 OS=Arabidopsis thaliana GN=IAA34 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.3e-29
Identity = 56/91 (61.54%), Postives = 73/91 (80.22%), Query Frame = 1 

Query: 100 QRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYK 159
           ++W YVKV MDG++VGRKVC+  HGSYS+LA QLEDMFG Q  SGL+LF+ ESEF L Y+
Sbjct: 90  RKWGYVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFCLVYR 149

Query: 160 DGDENWRSVGDVPWKQFVEDVKRLRIARKDE 191
           D +  WR+ GDVPW +F+E V+RLRI R+++
Sbjct: 150 DEEGLWRNAGDVPWNEFIESVERLRITRRND 180

[Close]
BLAST of Cp4.1LG01g13870 vs. Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-17
Identity = 51/114 (44.74%), Postives = 70/114 (61.40%), Query Frame = 1 

Query: 85  EEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQ---- 144
           E + ++ +E  + K +   +VKVNMDG ++GRKV +  H SY +LAL LE MF +     
Sbjct: 146 ESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGL 205

Query: 145 CES----GLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDE 191
           C S     LKL +N +E+ L Y+D D +W  VGDVPW+ FV  VKRLRI R  +
Sbjct: 206 CASHNTNSLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSD 259

[Close]
BLAST of Cp4.1LG01g13870 vs. Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-17
Identity = 51/114 (44.74%), Postives = 70/114 (61.40%), Query Frame = 1 

Query: 85  EEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQ---- 144
           E + ++ +E  + K +   +VKVNMDG ++GRKV +  H SY +LAL LE MF +     
Sbjct: 146 ESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGL 205

Query: 145 CES----GLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDE 191
           C S     LKL +N +E+ L Y+D D +W  VGDVPW+ FV  VKRLRI R  +
Sbjct: 206 CASHNTNSLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSD 259

[Close]
BLAST of Cp4.1LG01g13870 vs. Swiss-Prot
Match: IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=1 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 3.8e-17
Identity = 73/220 (33.18%), Postives = 99/220 (45.00%), Query Frame = 1 

Query: 12  GKGENG-SIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHT------AADLYMNIN 71
           GKGE+   + LGLSL       +G   G G   E G    A D        AAD   +  
Sbjct: 8   GKGESELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSVGSKRAADSASHAG 67

Query: 72  MNMKHNNNGVV-------------VVEQDYYCCEEEEEEAEEVVQSKHQR---------- 131
            +   +++ VV             V  Q      EEEE  ++ V+    +          
Sbjct: 68  SSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKV 127

Query: 132 -WAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGR----------QCESGLKLFEN 191
              ++KVNMDGV +GRKV +  H SY +LA  LEDMF R          Q    L+L + 
Sbjct: 128 QVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDG 187

[Close]
BLAST of Cp4.1LG01g13870 vs. TrEMBL
Match: A0A0A0KT91_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_5G610430 PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.9e-63
Identity = 133/196 (67.86%), Postives = 144/196 (73.47%), Query Frame = 1 

Query: 7   SVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGI-NWGAADHTAADLYMNINM 66
           SVYCEGKGENG IDLGLSLRTL            E+ E GI NWG  D            
Sbjct: 14  SVYCEGKGENGIIDLGLSLRTL------------EQPEMGIMNWGGQD------------ 73

Query: 67  NMKHNNNGVVVVEQDYYCC-EEEEEEAEEVVQSK--HQRWAYVKVNMDGVIVGRKVCIFQ 126
                        QDYYCC ++EE+  ++VVQSK  HQ+WAYVKVNMDGVIVGRKVCIFQ
Sbjct: 74  -------------QDYYCCTDQEEDHTDQVVQSKEQHQKWAYVKVNMDGVIVGRKVCIFQ 133

Query: 127 HGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKR 186
           + SYS+LALQLEDMFGRQCESGL+LFEN+SEFSLFYKDGDENWRSVGDVPWKQFVE VKR
Sbjct: 134 NASYSTLALQLEDMFGRQCESGLRLFENDSEFSLFYKDGDENWRSVGDVPWKQFVEGVKR 172

Query: 187 LRIARKDEGFVAIHQN 199
           LRIARKDE FV IHQN
Sbjct: 194 LRIARKDEAFVVIHQN 172

[Close]
BLAST of Cp4.1LG01g13870 vs. TrEMBL
Match: M5XIB3_PRUPE (Auxin-responsive protein OS=Prunus persica GN=PRUPE_ppa023002mg PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-45
Identity = 108/194 (55.67%), Postives = 132/194 (68.04%), Query Frame = 1 

Query: 7   SVYCEGKGENGSIDLGLSLRTLQPEV------VGSIEGYGEEDEHGINWGAADHTAADLY 66
           SVY E K  +G IDLGLSLR LQPE       + S+EGY +     I+W  A        
Sbjct: 17  SVYYEAKENDGIIDLGLSLRALQPETYHPSEQLESLEGYDDL----IDWPQA-------- 76

Query: 67  MNINMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCI 126
              N+N+K  N+ ++    +   C+EE E     VQSK +RWAYVKVNMDG+I+GRKVCI
Sbjct: 77  ---NLNLK--NSSIIHPRNNPEDCDEEAEG----VQSK-ERWAYVKVNMDGIIIGRKVCI 136

Query: 127 FQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDV 186
             H SYSSLA QLEDMFGRQ  SGL+LF+  SEFSLFYKD D+NWR+VGDVPW++FVE V
Sbjct: 137 LDHSSYSSLAFQLEDMFGRQSVSGLRLFQTGSEFSLFYKDRDDNWRTVGDVPWREFVECV 188

Query: 187 KRLRIARKDEGFVA 195
           KRLRIARK+E  ++
Sbjct: 197 KRLRIARKNEALLS 188

[Close]
BLAST of Cp4.1LG01g13870 vs. TrEMBL
Match: W9S577_9ROSA (Auxin-responsive protein OS=Morus notabilis GN=L484_017323 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.3e-45
Identity = 112/189 (59.26%), Postives = 137/189 (72.49%), Query Frame = 1 

Query: 7   SVYCEGKGEN-GSIDLGLSLRTLQPEV------VGSIEGYGEEDEHGINWGAADHTAADL 66
           SVY + K E+ G IDLGLSLRTLQPEV      + S+EGY +     I+W  +       
Sbjct: 17  SVYYQAKEEHDGVIDLGLSLRTLQPEVYHPSGHLVSLEGYDDL----IDWPQS------- 76

Query: 67  YMNINMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVC 126
               N+N+K +N   ++ +++ +  +E+ EE  E +QSK +RWAYVKVNMDG+IVGRKVC
Sbjct: 77  ----NLNLKSSN---IIQQRNNF--QEDCEEDGEGIQSK-ERWAYVKVNMDGIIVGRKVC 136

Query: 127 IFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVED 186
           I  HGSYSSLALQLEDMFGRQ  SGL+LF++ SEFSLFYKD  ENWRSVGDVPWK+FVE 
Sbjct: 137 ILDHGSYSSLALQLEDMFGRQSVSGLRLFQSGSEFSLFYKDRYENWRSVGDVPWKEFVEC 184

Query: 187 VKRLRIARK 189
           VKRLRIARK
Sbjct: 197 VKRLRIARK 184

[Close]
BLAST of Cp4.1LG01g13870 vs. TrEMBL
Match: F6HEV6_VITVI (Auxin-responsive protein OS=Vitis vinifera GN=VIT_01s0011g04070 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.3e-44
Identity = 105/200 (52.50%), Postives = 134/200 (67.00%), Query Frame = 1 

Query: 3   PNQFSVYCEGKGENGSIDLGLSLRTLQPEV-----------VGSIEGYGEEDEHGINWGA 62
           P+   VY + K ++G IDLGLSLRTLQP+V           VGS+EGYG   E  ++W  
Sbjct: 13  PSLHPVYYQTKEDDGIIDLGLSLRTLQPQVYHPTGHNAFESVGSLEGYGAYGEP-VDWP- 72

Query: 63  ADHTAADLYMNINMNMKHNNNGVV-VVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMD 122
                      +    +++N+G   V+ +D   CEEE E     VQSK +RWAYVKVNMD
Sbjct: 73  ----------QLEAQSRNSNSGCPKVIPED---CEEETEG----VQSK-ERWAYVKVNMD 132

Query: 123 GVIVGRKVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGD 182
           GV++GRK+C+     YSSLALQLEDMFGR   SGL+LF+ ESEF+LFYKD +ENWR+VGD
Sbjct: 133 GVVIGRKICVLDLAGYSSLALQLEDMFGRDSLSGLRLFQRESEFALFYKDREENWRTVGD 192

Query: 183 VPWKQFVEDVKRLRIARKDE 191
           VPWK+FV+ +KRLRI RK+E
Sbjct: 193 VPWKEFVDSIKRLRIVRKNE 192

[Close]
BLAST of Cp4.1LG01g13870 vs. TrEMBL
Match: A0A067KJ18_JATCU (Auxin-responsive protein OS=Jatropha curcas GN=JCGZ_09311 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.8e-43
Identity = 102/183 (55.74%), Postives = 127/183 (69.40%), Query Frame = 1 

Query: 7   SVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLYMNINMN 66
           SVY + K ++G IDLGLSLRTLQPE       + E     ++WG A           N +
Sbjct: 17  SVYYQAKEDDGIIDLGLSLRTLQPEAYHPSGHWEEGCGEMMSWGQA-----------NSS 76

Query: 67  MKHNNNGVV-VVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQHGS 126
           +KH+N+G    V+Q+   C+EE E     VQSK + WAYVKVNM+GV++GRK+CI  H  
Sbjct: 77  IKHSNSGYQGTVQQE---CDEEAEG----VQSK-ENWAYVKVNMEGVVIGRKICILDHVG 136

Query: 127 YSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRI 186
           YSSLALQLEDMFGRQ  +GL+LF+  SEF LFYKD D+NWR+VGDVPWK+FVE VKRLRI
Sbjct: 137 YSSLALQLEDMFGRQTATGLRLFQAGSEFCLFYKDRDDNWRTVGDVPWKEFVECVKRLRI 180

Query: 187 ARK 189
           AR+
Sbjct: 197 ARR 180

[Close]
BLAST of Cp4.1LG01g13870 vs. TAIR10
Match: AT2G01200.2 (AT2G01200.2 indole-3-acetic acid inducible 32)

HSP 1 Score: 148.7 bits (374), Expect = 3.9e-36
Identity = 85/191 (44.50%), Postives = 115/191 (60.21%), Query Frame = 1 

Query: 9   YCEGKGENGSIDLGLSLRTLQPEV------VGSIEGYGEEDEHGINWGAADHTAADLYMN 68
           Y + K   G IDLGLSLRT+Q E       +  ++GYGE     I+W    +       N
Sbjct: 20  YSQTKKGGGVIDLGLSLRTIQHETYLPPARMIGLDGYGEL----IDWSQPSY-------N 79

Query: 69  INMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQ 128
               +K  + G   + Q YY  E E             ++AYVKVN+DG++VGRKVC+  
Sbjct: 80  SITQLKSEDTGHQRLAQGYYNNEGESRG----------KYAYVKVNLDGLVVGRKVCLVD 139

Query: 129 HGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKR 188
            G+Y++LALQL DMFG Q  SGL+LF+ ESEFSL Y+D +  WR+VGDVPWK+FVE V R
Sbjct: 140 QGAYATLALQLNDMFGMQTVSGLRLFQTESEFSLVYRDREGIWRNVGDVPWKEFVESVDR 189

Query: 189 LRIARKDEGFV 194
           +RIAR+++  +
Sbjct: 200 MRIARRNDALL 189

[Close]
BLAST of Cp4.1LG01g13870 vs. TAIR10
Match: AT1G15050.1 (AT1G15050.1 indole-3-acetic acid inducible 34)

HSP 1 Score: 129.4 bits (324), Expect = 2.4e-30
Identity = 56/91 (61.54%), Postives = 73/91 (80.22%), Query Frame = 1 

Query: 100 QRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYK 159
           ++W YVKV MDG++VGRKVC+  HGSYS+LA QLEDMFG Q  SGL+LF+ ESEF L Y+
Sbjct: 90  RKWGYVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFCLVYR 149

Query: 160 DGDENWRSVGDVPWKQFVEDVKRLRIARKDE 191
           D +  WR+ GDVPW +F+E V+RLRI R+++
Sbjct: 150 DEEGLWRNAGDVPWNEFIESVERLRITRRND 180

[Close]
BLAST of Cp4.1LG01g13870 vs. TAIR10
Match: AT2G33310.2 (AT2G33310.2 auxin-induced protein 13)

HSP 1 Score: 89.7 bits (221), Expect = 2.1e-18
Identity = 73/220 (33.18%), Postives = 99/220 (45.00%), Query Frame = 1 

Query: 12  GKGENG-SIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHT------AADLYMNIN 71
           GKGE+   + LGLSL       +G   G G   E G    A D        AAD   +  
Sbjct: 8   GKGESELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSVGSKRAADSASHAG 67

Query: 72  MNMKHNNNGVV-------------VVEQDYYCCEEEEEEAEEVVQSKHQR---------- 131
            +   +++ VV             V  Q      EEEE  ++ V+    +          
Sbjct: 68  SSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKV 127

Query: 132 -WAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGR----------QCESGLKLFEN 191
              ++KVNMDGV +GRKV +  H SY +LA  LEDMF R          Q    L+L + 
Sbjct: 128 QVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDG 187

[Close]
BLAST of Cp4.1LG01g13870 vs. TAIR10
Match: AT1G04550.2 (AT1G04550.2 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-17
Identity = 49/112 (43.75%), Postives = 65/112 (58.04%), Query Frame = 1 

Query: 86  EEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMF----GRQC 145
           +E ++    V  K Q   +VKVNMDGV +GRKV +  H SY +LA  LE+MF    G  C
Sbjct: 108 DELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTC 167

Query: 146 ESGLK---LFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDE 191
              +K   L +  S+F L Y+D + +W  VGDVPW+ F+  VKRLRI    E
Sbjct: 168 REKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSE 219

[Close]
BLAST of Cp4.1LG01g13870 vs. TAIR10
Match: AT3G16500.1 (AT3G16500.1 phytochrome-associated protein 1)

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-12
Identity = 40/117 (34.19%), Postives = 66/117 (56.41%), Query Frame = 1 

Query: 87  EEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFG------RQ 146
           + ++ E+ V++K +   +VK+NMDGV +GRKV +  + SY  L+  ++ +F       R 
Sbjct: 137 KSDDGEKQVETKKEGM-FVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRD 196

Query: 147 CESG-------LKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDE 191
              G       + L + + EF+L Y+D + +   VGDVPW+ FV  VKRLR+ +  E
Sbjct: 197 ISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252

[Close]
BLAST of Cp4.1LG01g13870 vs. NCBI nr
Match: gi|449435210|ref|XP_004135388.1| (PREDICTED: auxin-responsive protein IAA32 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 2.7e-63
Identity = 133/196 (67.86%), Postives = 144/196 (73.47%), Query Frame = 1 

Query: 7   SVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGI-NWGAADHTAADLYMNINM 66
           SVYCEGKGENG IDLGLSLRTL            E+ E GI NWG  D            
Sbjct: 14  SVYCEGKGENGIIDLGLSLRTL------------EQPEMGIMNWGGQD------------ 73

Query: 67  NMKHNNNGVVVVEQDYYCC-EEEEEEAEEVVQSK--HQRWAYVKVNMDGVIVGRKVCIFQ 126
                        QDYYCC ++EE+  ++VVQSK  HQ+WAYVKVNMDGVIVGRKVCIFQ
Sbjct: 74  -------------QDYYCCTDQEEDHTDQVVQSKEQHQKWAYVKVNMDGVIVGRKVCIFQ 133

Query: 127 HGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKR 186
           + SYS+LALQLEDMFGRQCESGL+LFEN+SEFSLFYKDGDENWRSVGDVPWKQFVE VKR
Sbjct: 134 NASYSTLALQLEDMFGRQCESGLRLFENDSEFSLFYKDGDENWRSVGDVPWKQFVEGVKR 172

Query: 187 LRIARKDEGFVAIHQN 199
           LRIARKDE FV IHQN
Sbjct: 194 LRIARKDEAFVVIHQN 172

[Close]
BLAST of Cp4.1LG01g13870 vs. NCBI nr
Match: gi|659091613|ref|XP_008446639.1| (PREDICTED: auxin-responsive protein IAA32 [Cucumis melo])

HSP 1 Score: 250.4 bits (638), Expect = 2.7e-63
Identity = 133/196 (67.86%), Postives = 144/196 (73.47%), Query Frame = 1 

Query: 7   SVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGI-NWGAADHTAADLYMNINM 66
           SVYCEGKGENG IDLGLSLRTL            E+ E GI NWG  D            
Sbjct: 14  SVYCEGKGENGIIDLGLSLRTL------------EQPEMGIMNWGGQD------------ 73

Query: 67  NMKHNNNGVVVVEQDYYCC-EEEEEEAEEVVQSK--HQRWAYVKVNMDGVIVGRKVCIFQ 126
                        QDYYCC ++EE+  ++VVQSK  HQ+WAYVKVNMDGVIVGRKVCIFQ
Sbjct: 74  -------------QDYYCCTDQEEDHTDQVVQSKEQHQKWAYVKVNMDGVIVGRKVCIFQ 133

Query: 127 HGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKR 186
           + SYS+LALQLEDMFGRQCESGL+LFEN+SEFSLFYKDGDENWRSVGDVPWKQFVE VKR
Sbjct: 134 NASYSTLALQLEDMFGRQCESGLRLFENDSEFSLFYKDGDENWRSVGDVPWKQFVEGVKR 172

Query: 187 LRIARKDEGFVAIHQN 199
           LRIARKDE FV IHQN
Sbjct: 194 LRIARKDEAFVVIHQN 172

[Close]
BLAST of Cp4.1LG01g13870 vs. NCBI nr
Match: gi|596242090|ref|XP_007224495.1| (hypothetical protein PRUPE_ppa023002mg [Prunus persica])

HSP 1 Score: 190.7 bits (483), Expect = 2.5e-45
Identity = 108/194 (55.67%), Postives = 132/194 (68.04%), Query Frame = 1 

Query: 7   SVYCEGKGENGSIDLGLSLRTLQPEV------VGSIEGYGEEDEHGINWGAADHTAADLY 66
           SVY E K  +G IDLGLSLR LQPE       + S+EGY +     I+W  A        
Sbjct: 17  SVYYEAKENDGIIDLGLSLRALQPETYHPSEQLESLEGYDDL----IDWPQA-------- 76

Query: 67  MNINMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCI 126
              N+N+K  N+ ++    +   C+EE E     VQSK +RWAYVKVNMDG+I+GRKVCI
Sbjct: 77  ---NLNLK--NSSIIHPRNNPEDCDEEAEG----VQSK-ERWAYVKVNMDGIIIGRKVCI 136

Query: 127 FQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDV 186
             H SYSSLA QLEDMFGRQ  SGL+LF+  SEFSLFYKD D+NWR+VGDVPW++FVE V
Sbjct: 137 LDHSSYSSLAFQLEDMFGRQSVSGLRLFQTGSEFSLFYKDRDDNWRTVGDVPWREFVECV 188

Query: 187 KRLRIARKDEGFVA 195
           KRLRIARK+E  ++
Sbjct: 197 KRLRIARKNEALLS 188

[Close]
BLAST of Cp4.1LG01g13870 vs. NCBI nr
Match: gi|703118818|ref|XP_010101693.1| (Auxin-responsive protein IAA32 [Morus notabilis])

HSP 1 Score: 190.3 bits (482), Expect = 3.3e-45
Identity = 112/189 (59.26%), Postives = 137/189 (72.49%), Query Frame = 1 

Query: 7   SVYCEGKGEN-GSIDLGLSLRTLQPEV------VGSIEGYGEEDEHGINWGAADHTAADL 66
           SVY + K E+ G IDLGLSLRTLQPEV      + S+EGY +     I+W  +       
Sbjct: 17  SVYYQAKEEHDGVIDLGLSLRTLQPEVYHPSGHLVSLEGYDDL----IDWPQS------- 76

Query: 67  YMNINMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVC 126
               N+N+K +N   ++ +++ +  +E+ EE  E +QSK +RWAYVKVNMDG+IVGRKVC
Sbjct: 77  ----NLNLKSSN---IIQQRNNF--QEDCEEDGEGIQSK-ERWAYVKVNMDGIIVGRKVC 136

Query: 127 IFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVED 186
           I  HGSYSSLALQLEDMFGRQ  SGL+LF++ SEFSLFYKD  ENWRSVGDVPWK+FVE 
Sbjct: 137 ILDHGSYSSLALQLEDMFGRQSVSGLRLFQSGSEFSLFYKDRYENWRSVGDVPWKEFVEC 184

Query: 187 VKRLRIARK 189
           VKRLRIARK
Sbjct: 197 VKRLRIARK 184

[Close]
BLAST of Cp4.1LG01g13870 vs. NCBI nr
Match: gi|645276429|ref|XP_008243285.1| (PREDICTED: LOW QUALITY PROTEIN: auxin-responsive protein IAA32-like [Prunus mume])

HSP 1 Score: 188.0 bits (476), Expect = 1.6e-44
Identity = 109/194 (56.19%), Postives = 134/194 (69.07%), Query Frame = 1 

Query: 7   SVYCEGKGENGSIDLGLSLRTLQPEV------VGSIEGYGEEDEHGINWGAADHTAADLY 66
           SVY E K  +G IDLGLSLR LQPE       + S+EGY +     I+W  A        
Sbjct: 76  SVYYEAKENDGIIDLGLSLRALQPETYHPSEQLVSLEGYDDL----IDWPQA-------- 135

Query: 67  MNINMNMKHNNNGVVVVEQDYYCCEEEEEEAEEVVQSKHQRWAYVKVNMDGVIVGRKVCI 126
              N+N+K  N+ +   +Q  +  E+ +EEAE V QSK +RWAYVKVNMDG+I+GRKVCI
Sbjct: 136 ---NLNLK--NSSITSKKQPEF--EDCDEEAEGV-QSK-ERWAYVKVNMDGIIIGRKVCI 195

Query: 127 FQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDV 186
             H  YSSLA QLEDMFGRQ  SGL+LF+  SEFSLFYKD D+NWR+VGDVPW++FVE V
Sbjct: 196 LDHSGYSSLAFQLEDMFGRQSVSGLRLFQTGSEFSLFYKDRDDNWRTVGDVPWREFVECV 248

Query: 187 KRLRIARKDEGFVA 195
           KRLRIARK+E  ++
Sbjct: 256 KRLRIARKNEALLS 248

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g13870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IAA32_ARATH6.9e-3544.50Auxin-responsive protein IAA32 OS=Arabidopsis thaliana GN=IAA32 PE=2 SV=2[more]
IAA34_ARATH4.3e-2961.54Auxin-responsive protein IAA34 OS=Arabidopsis thaliana GN=IAA34 PE=2 SV=1[more]
IAA10_ORYSJ2.2e-1744.74Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=... [more]
IAA10_ORYSI2.2e-1744.74Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2[more]
IAA13_ARATH3.8e-1733.18Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=1 SV=2[more]
BLAST of Cp4.1LG01g13870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KT91_CUCSA1.9e-6367.86Auxin-responsive protein OS=Cucumis sativus GN=Csa_5G610430 PE=3 SV=1[more]
M5XIB3_PRUPE1.8e-4555.67Auxin-responsive protein OS=Prunus persica GN=PRUPE_ppa023002mg PE=3 SV=1[more]
W9S577_9ROSA2.3e-4559.26Auxin-responsive protein OS=Morus notabilis GN=L484_017323 PE=3 SV=1[more]
F6HEV6_VITVI4.3e-4452.50Auxin-responsive protein OS=Vitis vinifera GN=VIT_01s0011g04070 PE=3 SV=1[more]
A0A067KJ18_JATCU2.8e-4355.74Auxin-responsive protein OS=Jatropha curcas GN=JCGZ_09311 PE=3 SV=1[more]
BLAST of Cp4.1LG01g13870 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01200.23.9e-3644.50 indole-3-acetic acid inducible 32[more]
AT1G15050.12.4e-3061.54 indole-3-acetic acid inducible 34[more]
AT2G33310.22.1e-1833.18 auxin-induced protein 13[more]
AT1G04550.22.4e-1743.75 AUX/IAA transcriptional regulator family protein[more]
AT3G16500.11.7e-1234.19 phytochrome-associated protein 1[more]
BLAST of Cp4.1LG01g13870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435210|ref|XP_004135388.1|2.7e-6367.86PREDICTED: auxin-responsive protein IAA32 [Cucumis sativus][more]
gi|659091613|ref|XP_008446639.1|2.7e-6367.86PREDICTED: auxin-responsive protein IAA32 [Cucumis melo][more]
gi|596242090|ref|XP_007224495.1|2.5e-4555.67hypothetical protein PRUPE_ppa023002mg [Prunus persica][more]
gi|703118818|ref|XP_010101693.1|3.3e-4559.26Auxin-responsive protein IAA32 [Morus notabilis][more]
gi|645276429|ref|XP_008243285.1|1.6e-4456.19PREDICTED: LOW QUALITY PROTEIN: auxin-responsive protein IAA32-like [Prunus mume... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR003311AUX_IAA
IPR000270PB1_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009734 auxin-activated signaling pathway
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g13870.1Cp4.1LG01g13870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainPROFILEPS51745PB1coord: 102..190
score: 19
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 86..190
score: 5.5
NoneNo IPR availablePANTHERPTHR31734:SF29AUXIN-RESPONSIVE PROTEIN IAA32-RELATEDcoord: 86..190
score: 5.5
NoneNo IPR availableunknownSSF54277CAD & PB1 domainscoord: 99..185
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g13870Cucsa.283300Cucumber (Gy14) v1cgycpeB0750
Cp4.1LG01g13870CmaCh18G009960Cucurbita maxima (Rimu)cmacpeB429
Cp4.1LG01g13870CmaCh04G014880Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g13870CmoCh18G010050Cucurbita moschata (Rifu)cmocpeB392
Cp4.1LG01g13870CmoCh04G015610Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g13870Cla020420Watermelon (97103) v1cpewmB427
Cp4.1LG01g13870Csa5G610430Cucumber (Chinese Long) v2cpecuB439
Cp4.1LG01g13870MELO3C012276Melon (DHL92) v3.5.1cpemeB363
Cp4.1LG01g13870CSPI05G25560Wild cucumber (PI 183967)cpecpiB439
Cp4.1LG01g13870Lsi04G002230Bottle gourd (USVL1VR-Ls)cpelsiB352
Cp4.1LG01g13870MELO3C012276.2Melon (DHL92) v3.6.1cpemedB423
Cp4.1LG01g13870CsaV3_5G034610Cucumber (Chinese Long) v3cpecucB0543
Cp4.1LG01g13870Bhi07G001071Wax gourdcpewgoB0557
Cp4.1LG01g13870Carg01857Silver-seed gourdcarcpeB1177
Cp4.1LG01g13870Carg19045Silver-seed gourdcarcpeB1466
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g13870Cp4.1LG09g03280Cucurbita pepo (Zucchini)cpecpeB040
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g13870Wax gourdcpewgoB0514
Cp4.1LG01g13870Cucurbita pepo (Zucchini)cpecpeB205
Cp4.1LG01g13870Cucurbita pepo (Zucchini)cpecpeB345
Cp4.1LG01g13870Cucurbita pepo (Zucchini)cpecpeB399
Cp4.1LG01g13870Cucurbita maxima (Rimu)cmacpeB323
Cp4.1LG01g13870Cucurbita maxima (Rimu)cmacpeB737
Cp4.1LG01g13870Cucurbita moschata (Rifu)cmocpeB115
Cp4.1LG01g13870Cucurbita moschata (Rifu)cmocpeB285
Cp4.1LG01g13870Cucurbita moschata (Rifu)cmocpeB691
Cp4.1LG01g13870Wild cucumber (PI 183967)cpecpiB381
Cp4.1LG01g13870Cucumber (Chinese Long) v2cpecuB381
Cp4.1LG01g13870Bottle gourd (USVL1VR-Ls)cpelsiB371
Cp4.1LG01g13870Watermelon (Charleston Gray)cpewcgB388
Cp4.1LG01g13870Watermelon (Charleston Gray)cpewcgB401
Cp4.1LG01g13870Watermelon (97103) v1cpewmB470
Cp4.1LG01g13870Melon (DHL92) v3.5.1cpemeB395
Cp4.1LG01g13870Cucumber (Gy14) v2cgybcpeB063
Cp4.1LG01g13870Cucumber (Gy14) v2cgybcpeB648
Cp4.1LG01g13870Melon (DHL92) v3.6.1cpemedB458
Cp4.1LG01g13870Cucumber (Chinese Long) v3cpecucB0474
Cp4.1LG01g13870Cucumber (Chinese Long) v3cpecucB0539