Carg01857 (gene) Silver-seed gourd

Overview
NameCarg01857
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionAuxin-responsive protein
LocationCucurbita_argyrosperma_scaffold_003 : 782066 .. 783040 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATTTGAGATAATGGAGCCTAATCAGTTCTCTGTTTACTGTGAAGGGAAAGGGGAGAATGGGAGCATTGATTTGGGGCTGAGCCTGAGAACGCTGCAGCCAGAGGTGGTGGGATCAATAGAAGGGTATGGGGAGGAGGATGAGCATGGGATCAACTGGGGGGCGGCGGATCACACGGCGGCGGATCTGTACATGAACATCAACATCAACATGAAACATAGTAATAATAATAATGGAGTTGTAGTAGTACAACAAGATTACTACTGTTGTGCGGAGGAGGAGGAGGAGGAGGCAGAGGAGGTGGTGCAGAGCAAACAGCAGCGCTGGGCTTATGTCAAAGTCAATATGGATGGTGTCATTGTTGGTAGAAAAGTTTGCATCTTTCAACATGGCTCCTATTCCAGTCTCGCGCTTCAGCTCGAAGACATGTTTGGTATGGTTCATTTCTTTTTGTCGATCATAATTTGACGTGTTAAGGAGTGGATAAAGCTTAATTTTGATATGGGTCTCTCTTTTTTGTTGGTTAGGTTAGTTTGGTTTGTTCGAGTTATTTATTTAAATACTTATACTGTCTATGTTTATTGGTGGGATCAGGTCGACAATGTGAATCTGGGTTGAAATTGTTTGAGAATGAATCTGAATTCTCACTCTTTTACAAAGATGGAGACGAAAATTGGAGGAGTGTCGGTGACGTCCCGTGGAAGTAAGTTTATAACAATCGTTCGATTTACTTAAATGAATCAAATTAATTTGAGTGTTAGTTTTAAATTTTTGATCTAATTTGGTGACTTGGTTTTGTTGGTAAACGGACAGGCAATTCGTGGAGGATGTAAAGAGGCTGAGAATTGCTCGGAAAGATGAGGGTTTTGTTGCCATTCATCAAAATTAACTTAAAAACTTTCTTAATGGAATTATATTTTGTGTTACGTTGGAAGCTTTGGATAAATTATCTAATTTTAAGGAACCTTTTATAAC

mRNA sequence

CCATTTGAGATAATGGAGCCTAATCAGTTCTCTGTTTACTGTGAAGGGAAAGGGGAGAATGGGAGCATTGATTTGGGGCTGAGCCTGAGAACGCTGCAGCCAGAGGTGGTGGGATCAATAGAAGGGTATGGGGAGGAGGATGAGCATGGGATCAACTGGGGGGCGGCGGATCACACGGCGGCGGATCTGTACATGAACATCAACATCAACATGAAACATAGTAATAATAATAATGGAGTTGTAGTAGTACAACAAGATTACTACTGTTGTGCGGAGGAGGAGGAGGAGGAGGCAGAGGAGGTGGTGCAGAGCAAACAGCAGCGCTGGGCTTATGTCAAAGTCAATATGGATGGTGTCATTGTTGGTAGAAAAGTTTGCATCTTTCAACATGGCTCCTATTCCAGTCTCGCGCTTCAGCTCGAAGACATGTTTGGTCGACAATGTGAATCTGGGTTGAAATTGTTTGAGAATGAATCTGAATTCTCACTCTTTTACAAAGATGGAGACGAAAATTGGAGGAGTGTCGGTGACGTCCCGTGGAAGCAATTCGTGGAGGATGTAAAGAGGCTGAGAATTGCTCGGAAAGATGAGGGTTTTGTTGCCATTCATCAAAATTAACTTAAAAACTTTCTTAATGGAATTATATTTTGTGTTACGTTGGAAGCTTTGGATAAATTATCTAATTTTAAGGAACCTTTTATAAC

Coding sequence (CDS)

CCATTTGAGATAATGGAGCCTAATCAGTTCTCTGTTTACTGTGAAGGGAAAGGGGAGAATGGGAGCATTGATTTGGGGCTGAGCCTGAGAACGCTGCAGCCAGAGGTGGTGGGATCAATAGAAGGGTATGGGGAGGAGGATGAGCATGGGATCAACTGGGGGGCGGCGGATCACACGGCGGCGGATCTGTACATGAACATCAACATCAACATGAAACATAGTAATAATAATAATGGAGTTGTAGTAGTACAACAAGATTACTACTGTTGTGCGGAGGAGGAGGAGGAGGAGGCAGAGGAGGTGGTGCAGAGCAAACAGCAGCGCTGGGCTTATGTCAAAGTCAATATGGATGGTGTCATTGTTGGTAGAAAAGTTTGCATCTTTCAACATGGCTCCTATTCCAGTCTCGCGCTTCAGCTCGAAGACATGTTTGGTCGACAATGTGAATCTGGGTTGAAATTGTTTGAGAATGAATCTGAATTCTCACTCTTTTACAAAGATGGAGACGAAAATTGGAGGAGTGTCGGTGACGTCCCGTGGAAGCAATTCGTGGAGGATGTAAAGAGGCTGAGAATTGCTCGGAAAGATGAGGGTTTTGTTGCCATTCATCAAAATTAA

Protein sequence

PFEIMEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLYMNININMKHSNNNNGVVVVQQDYYCCAEEEEEEAEEVVQSKQQRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDEGFVAIHQN
Homology
[Close]
BLAST of Carg01857 vs. NCBI nr
Match: XP_022957191.1 (auxin-responsive protein IAA32-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 337.8 bits (865), Expect = 2.6e-89
Identity = 198/201 (98.51%), Postives = 199/201 (99.00%), Query Frame = 0 

Query: 5   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 64
           MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY
Sbjct: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60

Query: 65  MNININMKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVGRK 124
           MNININMKHS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVGRK
Sbjct: 61  MNININMKHS--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVGRK 120

Query: 125 VCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFV 184
           VCIFQHGSYS+LALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFV
Sbjct: 121 VCIFQHGSYSNLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFV 180

Query: 185 EDVKRLRIARKDEGFVAIHQN 206
           EDVKRLRIARKDEGFVAIHQN
Sbjct: 181 EDVKRLRIARKDEGFVAIHQN 199

[Close]
BLAST of Carg01857 vs. NCBI nr
Match: XP_023513171.1 (auxin-responsive protein IAA32-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.9 bits (860), Expect = 9.7e-89
Identity = 193/201 (96.02%), Postives = 194/201 (96.52%), Query Frame = 0 

Query: 5   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 64
           MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY
Sbjct: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60

Query: 65  MNININMKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVGRK 124
           MNIN+NMKH   XXXXXXXXXXXXXXXXXXXXXXXXXXX    RWAYVKVNMDGVIVGRK
Sbjct: 61  MNINMNMKH---XXXXXXXXXXXXXXXXXXXXXXXXXXXSKHQRWAYVKVNMDGVIVGRK 120

Query: 125 VCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFV 184
           VCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFV
Sbjct: 121 VCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFV 180

Query: 185 EDVKRLRIARKDEGFVAIHQN 206
           EDVKRLRIARKDEGFVAIHQN
Sbjct: 181 EDVKRLRIARKDEGFVAIHQN 198

[Close]
BLAST of Carg01857 vs. NCBI nr
Match: XP_022957190.1 (auxin-responsive protein IAA32-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 332.8 bits (852), Expect = 8.2e-88
Identity = 198/203 (97.54%), Postives = 199/203 (98.03%), Query Frame = 0 

Query: 5   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 64
           MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY
Sbjct: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60

Query: 65  MNININMKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVGRK 124
           MNININMKHS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVGRK
Sbjct: 61  MNININMKHS--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVGRK 120

Query: 125 VCIFQHGSYSSLALQLEDMF--GRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQ 184
           VCIFQHGSYS+LALQLEDMF  GRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQ
Sbjct: 121 VCIFQHGSYSNLALQLEDMFGSGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQ 180

Query: 185 FVEDVKRLRIARKDEGFVAIHQN 206
           FVEDVKRLRIARKDEGFVAIHQN
Sbjct: 181 FVEDVKRLRIARKDEGFVAIHQN 201

[Close]
BLAST of Carg01857 vs. NCBI nr
Match: XP_022986212.1 (auxin-responsive protein IAA32-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 332.8 bits (852), Expect = 8.2e-88
Identity = 198/203 (97.54%), Postives = 199/203 (98.03%), Query Frame = 0 

Query: 5   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 64
           MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHG+NWGAADHTAADLY
Sbjct: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGMNWGAADHTAADLY 60

Query: 65  --MNININMKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVG 124
             MNININMKHS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVG
Sbjct: 61  MNMNININMKHS--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVG 120

Query: 125 RKVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQ 184
           RKVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQ
Sbjct: 121 RKVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQ 180

Query: 185 FVEDVKRLRIARKDEGFVAIHQN 206
           FVEDVKRLRIARKDEGFVAIHQN
Sbjct: 181 FVEDVKRLRIARKDEGFVAIHQN 201

[Close]
BLAST of Carg01857 vs. NCBI nr
Match: XP_023513162.1 (auxin-responsive protein IAA32-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.9 bits (847), Expect = 3.1e-87
Identity = 193/203 (95.07%), Postives = 194/203 (95.57%), Query Frame = 0 

Query: 5   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 64
           MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY
Sbjct: 1   MEPNQFSVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGINWGAADHTAADLY 60

Query: 65  MNININMKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVGRK 124
           MNIN+NMKH   XXXXXXXXXXXXXXXXXXXXXXXXXXX    RWAYVKVNMDGVIVGRK
Sbjct: 61  MNINMNMKH---XXXXXXXXXXXXXXXXXXXXXXXXXXXSKHQRWAYVKVNMDGVIVGRK 120

Query: 125 VCIFQHGSYSSLALQLEDMF--GRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQ 184
           VCIFQHGSYSSLALQLEDMF  GRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQ
Sbjct: 121 VCIFQHGSYSSLALQLEDMFGSGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQ 180

Query: 185 FVEDVKRLRIARKDEGFVAIHQN 206
           FVEDVKRLRIARKDEGFVAIHQN
Sbjct: 181 FVEDVKRLRIARKDEGFVAIHQN 200

[Close]
BLAST of Carg01857 vs. TAIR10
Match: AT2G01200.2 (indole-3-acetic acid inducible 32)

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-33
Identity = 77/194 (39.69%), Postives = 108/194 (55.67%), Query Frame = 0 

Query: 13  YCEGKGENGSIDLGLSLRTLQ------PEVVGSIEGYGEEDEHGINWGAADHTAADLYMN 72
           Y + K   G IDLGLSLRT+Q      P  +  ++GYGE     I+W    + +     +
Sbjct: 20  YSQTKKGGGVIDLGLSLRTIQHETYLPPARMIGLDGYGEL----IDWSQPSYNSITQLKS 79

Query: 73  ININMKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVGRKVC 132
            +   +                                   ++AYVKVN+DG++VGRKVC
Sbjct: 80  EDTGHQR--------------------LAQGYYNNEGESRGKYAYVKVNLDGLVVGRKVC 139

Query: 133 IFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVED 192
           +   G+Y++LALQL DMFG Q  SGL+LF+ ESEFSL Y+D +  WR+VGDVPWK+FVE 
Sbjct: 140 LVDQGAYATLALQLNDMFGMQTVSGLRLFQTESEFSLVYRDREGIWRNVGDVPWKEFVES 189

Query: 193 VKRLRIARKDEGFV 201
           V R+RIAR+++  +
Sbjct: 200 VDRMRIARRNDALL 189

[Close]
BLAST of Carg01857 vs. TAIR10
Match: AT1G15050.1 (indole-3-acetic acid inducible 34)

HSP 1 Score: 129.4 bits (324), Expect = 2.5e-30
Identity = 56/90 (62.22%), Postives = 72/90 (80.00%), Query Frame = 0 

Query: 108 RWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKD 167
           +W YVKV MDG++VGRKVC+  HGSYS+LA QLEDMFG Q  SGL+LF+ ESEF L Y+D
Sbjct: 91  KWGYVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFCLVYRD 150

Query: 168 GDENWRSVGDVPWKQFVEDVKRLRIARKDE 198
            +  WR+ GDVPW +F+E V+RLRI R+++
Sbjct: 151 EEGLWRNAGDVPWNEFIESVERLRITRRND 180

[Close]
BLAST of Carg01857 vs. TAIR10
Match: AT2G33310.2 (auxin-induced protein 13)

HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18
Identity = 45/97 (46.39%), Postives = 59/97 (60.82%), Query Frame = 0 

Query: 111 YVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGR----------QCESGLKLFENESE 170
           ++KVNMDGV +GRKV +  H SY +LA  LEDMF R          Q    L+L +  SE
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190

Query: 171 FSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDE 198
           F L Y+D + +W  VGDVPW+ F+  VKRLR+ +  E
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 227

[Close]
BLAST of Carg01857 vs. TAIR10
Match: AT1G04550.2 (AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 85.5 bits (210), Expect = 4.2e-17
Identity = 45/94 (47.87%), Postives = 58/94 (61.70%), Query Frame = 0 

Query: 111 YVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMF----GRQCE---SGLKLFENESEFSL 170
           +VKVNMDGV +GRKV +  H SY +LA  LE+MF    G  C      L+L +  S+F L
Sbjct: 126 FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVL 185

Query: 171 FYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDE 198
            Y+D + +W  VGDVPW+ F+  VKRLRI    E
Sbjct: 186 TYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSE 219

[Close]
BLAST of Carg01857 vs. TAIR10
Match: AT1G52830.1 (indole-3-acetic acid 6)

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-12
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = 0 

Query: 111 YVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQCES-GLKLFENESEFSLFYKDGD 170
           YVKV+MDGV   RK+ +    SY +L   LE++FG  C   G+     + E+ + Y+D D
Sbjct: 95  YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFG--CLGIGVAKEGKKCEYIIIYEDKD 154

Query: 171 ENWRSVGDVPWKQFVEDVKRLRIARKDE 198
            +W  VGDVPW+ F E  KRLRI ++ +
Sbjct: 155 RDWMLVGDVPWQMFKESCKRLRIVKRSD 180

[Close]
BLAST of Carg01857 vs. Swiss-Prot
Match: sp|Q8RYC6|IAA32_ARATH (Auxin-responsive protein IAA32 OS=Arabidopsis thaliana OX=3702 GN=IAA32 PE=1 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 7.5e-32
Identity = 77/194 (39.69%), Postives = 108/194 (55.67%), Query Frame = 0 

Query: 13  YCEGKGENGSIDLGLSLRTLQ------PEVVGSIEGYGEEDEHGINWGAADHTAADLYMN 72
           Y + K   G IDLGLSLRT+Q      P  +  ++GYGE     I+W    + +     +
Sbjct: 20  YSQTKKGGGVIDLGLSLRTIQHETYLPPARMIGLDGYGEL----IDWSQPSYNSITQLKS 79

Query: 73  ININMKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVGRKVC 132
            +   +                                   ++AYVKVN+DG++VGRKVC
Sbjct: 80  EDTGHQR--------------------LAQGYYNNEGESRGKYAYVKVNLDGLVVGRKVC 139

Query: 133 IFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVED 192
           +   G+Y++LALQL DMFG Q  SGL+LF+ ESEFSL Y+D +  WR+VGDVPWK+FVE 
Sbjct: 140 LVDQGAYATLALQLNDMFGMQTVSGLRLFQTESEFSLVYRDREGIWRNVGDVPWKEFVES 189

Query: 193 VKRLRIARKDEGFV 201
           V R+RIAR+++  +
Sbjct: 200 VDRMRIARRNDALL 189

[Close]
BLAST of Carg01857 vs. Swiss-Prot
Match: sp|Q9C5X0|IAA34_ARATH (Auxin-responsive protein IAA34 OS=Arabidopsis thaliana OX=3702 GN=IAA34 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.5e-29
Identity = 56/90 (62.22%), Postives = 72/90 (80.00%), Query Frame = 0 

Query: 108 RWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKD 167
           +W YVKV MDG++VGRKVC+  HGSYS+LA QLEDMFG Q  SGL+LF+ ESEF L Y+D
Sbjct: 91  KWGYVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFCLVYRD 150

Query: 168 GDENWRSVGDVPWKQFVEDVKRLRIARKDE 198
            +  WR+ GDVPW +F+E V+RLRI R+++
Sbjct: 151 EEGLWRNAGDVPWNEFIESVERLRITRRND 180

[Close]
BLAST of Carg01857 vs. Swiss-Prot
Match: sp|A2XB18|IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 1.8e-17
Identity = 48/95 (50.53%), Postives = 61/95 (64.21%), Query Frame = 0 

Query: 111 YVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQ----CES----GLKLFENESEFS 170
           +VKVNMDG ++GRKV +  H SY +LAL LE MF +     C S     LKL +N +E+ 
Sbjct: 165 WVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNSAEYQ 224

Query: 171 LFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDE 198
           L Y+D D +W  VGDVPW+ FV  VKRLRI R  +
Sbjct: 225 LTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSD 259

[Close]
BLAST of Carg01857 vs. Swiss-Prot
Match: sp|Q0DWF2|IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 1.8e-17
Identity = 48/95 (50.53%), Postives = 61/95 (64.21%), Query Frame = 0 

Query: 111 YVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQ----CES----GLKLFENESEFS 170
           +VKVNMDG ++GRKV +  H SY +LAL LE MF +     C S     LKL +N +E+ 
Sbjct: 165 WVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNSAEYQ 224

Query: 171 LFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDE 198
           L Y+D D +W  VGDVPW+ FV  VKRLRI R  +
Sbjct: 225 LTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSD 259

[Close]
BLAST of Carg01857 vs. Swiss-Prot
Match: sp|Q38831|IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 3.0e-17
Identity = 45/97 (46.39%), Postives = 59/97 (60.82%), Query Frame = 0 

Query: 111 YVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGR----------QCESGLKLFENESE 170
           ++KVNMDGV +GRKV +  H SY +LA  LEDMF R          Q    L+L +  SE
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190

Query: 171 FSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDE 198
           F L Y+D + +W  VGDVPW+ F+  VKRLR+ +  E
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 227

[Close]
BLAST of Carg01857 vs. TrEMBL
Match: tr|A0A1S3BG83|A0A1S3BG83_CUCME (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489310 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.8e-54
Identity = 121/196 (61.73%), Postives = 129/196 (65.82%), Query Frame = 0 

Query: 11  SVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGI-NWGAADHTAADLYMNINI 70
           SVYCEGKGENG IDLGLSLRTL            E+ E GI NWG  D    D Y   + 
Sbjct: 14  SVYCEGKGENGIIDLGLSLRTL------------EQPEMGIMNWGGQDQ---DYYCCTDQ 73

Query: 71  NMKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVGRKVCIFQ 130
              H+                                 +WAYVKVNMDGVIVGRKVCIFQ
Sbjct: 74  EEDHT----------------------DQVVQSKEQHQKWAYVKVNMDGVIVGRKVCIFQ 133

Query: 131 HGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKR 190
           + SYS+LALQLEDMFGRQCESGL+LFEN+SEFSLFYKDGDENWRSVGDVPWKQFVE VKR
Sbjct: 134 NASYSTLALQLEDMFGRQCESGLRLFENDSEFSLFYKDGDENWRSVGDVPWKQFVEGVKR 172

Query: 191 LRIARKDEGFVAIHQN 206
           LRIARKDE FV IHQN
Sbjct: 194 LRIARKDEAFVVIHQN 172

[Close]
BLAST of Carg01857 vs. TrEMBL
Match: tr|A0A0A0KT91|A0A0A0KT91_CUCSA (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_5G610430 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.8e-54
Identity = 121/196 (61.73%), Postives = 129/196 (65.82%), Query Frame = 0 

Query: 11  SVYCEGKGENGSIDLGLSLRTLQPEVVGSIEGYGEEDEHGI-NWGAADHTAADLYMNINI 70
           SVYCEGKGENG IDLGLSLRTL            E+ E GI NWG  D    D Y   + 
Sbjct: 14  SVYCEGKGENGIIDLGLSLRTL------------EQPEMGIMNWGGQDQ---DYYCCTDQ 73

Query: 71  NMKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVGRKVCIFQ 130
              H+                                 +WAYVKVNMDGVIVGRKVCIFQ
Sbjct: 74  EEDHT----------------------DQVVQSKEQHQKWAYVKVNMDGVIVGRKVCIFQ 133

Query: 131 HGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKR 190
           + SYS+LALQLEDMFGRQCESGL+LFEN+SEFSLFYKDGDENWRSVGDVPWKQFVE VKR
Sbjct: 134 NASYSTLALQLEDMFGRQCESGLRLFENDSEFSLFYKDGDENWRSVGDVPWKQFVEGVKR 172

Query: 191 LRIARKDEGFVAIHQN 206
           LRIARKDE FV IHQN
Sbjct: 194 LRIARKDEAFVVIHQN 172

[Close]
BLAST of Carg01857 vs. TrEMBL
Match: tr|M5XIB3|M5XIB3_PRUPE (Auxin-responsive protein OS=Prunus persica OX=3760 GN=PRUPE_1G317000 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.2e-41
Identity = 100/197 (50.76%), Postives = 119/197 (60.41%), Query Frame = 0 

Query: 11  SVYCEGKGENGSIDLGLSLRTLQPEV------VGSIEGYGEEDEHGINWGAADHTAADLY 70
           SVY E K  +G IDLGLSLR LQPE       + S+EGY +     I+W  A        
Sbjct: 17  SVYYEAKENDGIIDLGLSLRALQPETYHPSEQLESLEGYDDL----IDWPQA-------- 76

Query: 71  MNININMKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVGRK 130
              N+N+K+S                                 RWAYVKVNMDG+I+GRK
Sbjct: 77  ---NLNLKNS----------SIIHPRNNPEDCDEEAEGVQSKERWAYVKVNMDGIIIGRK 136

Query: 131 VCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQFV 190
           VCI  H SYSSLA QLEDMFGRQ  SGL+LF+  SEFSLFYKD D+NWR+VGDVPW++FV
Sbjct: 137 VCILDHSSYSSLAFQLEDMFGRQSVSGLRLFQTGSEFSLFYKDRDDNWRTVGDVPWREFV 188

Query: 191 EDVKRLRIARKDEGFVA 202
           E VKRLRIARK+E  ++
Sbjct: 197 ECVKRLRIARKNEALLS 188

[Close]
BLAST of Carg01857 vs. TrEMBL
Match: tr|W9S577|W9S577_9ROSA (Auxin-responsive protein OS=Morus notabilis OX=981085 GN=L484_017323 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 8.5e-41
Identity = 105/192 (54.69%), Postives = 119/192 (61.98%), Query Frame = 0 

Query: 11  SVYCEGKGE-NGSIDLGLSLRTLQPEV------VGSIEGYGEEDEHGINWGAADHTAADL 70
           SVY + K E +G IDLGLSLRTLQPEV      + S+EGY +     I+W  +       
Sbjct: 17  SVYYQAKEEHDGVIDLGLSLRTLQPEVYHPSGHLVSLEGYDDL----IDWPQS------- 76

Query: 71  YMNININMKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVNMDGVIVGR 130
               N+N+K S                                 RWAYVKVNMDG+IVGR
Sbjct: 77  ----NLNLKSS---------NIIQQRNNFQEDCEEDGEGIQSKERWAYVKVNMDGIIVGR 136

Query: 131 KVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSVGDVPWKQF 190
           KVCI  HGSYSSLALQLEDMFGRQ  SGL+LF++ SEFSLFYKD  ENWRSVGDVPWK+F
Sbjct: 137 KVCILDHGSYSSLALQLEDMFGRQSVSGLRLFQSGSEFSLFYKDRYENWRSVGDVPWKEF 184

Query: 191 VEDVKRLRIARK 196
           VE VKRLRIARK
Sbjct: 197 VECVKRLRIARK 184

[Close]
BLAST of Carg01857 vs. TrEMBL
Match: tr|A0A2K1YST0|A0A2K1YST0_POPTR (Auxin-responsive protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G119900v3 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.9e-40
Identity = 100/202 (49.50%), Postives = 118/202 (58.42%), Query Frame = 0 

Query: 2   FEIMEPNQFSVYCEGKGENGSIDLGLSLRTLQPEV------VGSIEGYGEEDEHGINWGA 61
           F +  P   S Y + + ++G IDLGLSLRTL+PE       +  +EGYG+     ++W  
Sbjct: 8   FLLNPPALHSTYYQPREDDGIIDLGLSLRTLKPEAYHPSGHLVGLEGYGDL----MDWPR 67

Query: 62  ADHTAADLYMNININMKHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWAYVKVN 121
           A           N  +KHS                                 RWAYVKVN
Sbjct: 68  A-----------NSPLKHS----------TSSYIRFTPQDCDEEAEGVQSKDRWAYVKVN 127

Query: 122 MDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQCESGLKLFENESEFSLFYKDGDENWRSV 181
           MDGVIVGRK+CI  HG YSSLALQLEDMFGRQ  SGL+LF+  SEF LFYKD +ENWR+V
Sbjct: 128 MDGVIVGRKICILDHGGYSSLALQLEDMFGRQSASGLRLFQAGSEFCLFYKDREENWRTV 184

Query: 182 GDVPWKQFVEDVKRLRIARKDE 198
           GDVPWK+FVE VKRLRIARK E
Sbjct: 188 GDVPWKEFVESVKRLRIARKSE 184

The following BLAST results are available for this feature:
BLAST of Carg01857 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022957191.12.6e-8998.51auxin-responsive protein IAA32-like isoform X2 [Cucurbita moschata][more]
XP_023513171.19.7e-8996.02auxin-responsive protein IAA32-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022957190.18.2e-8897.54auxin-responsive protein IAA32-like isoform X1 [Cucurbita moschata][more]
XP_022986212.18.2e-8897.54auxin-responsive protein IAA32-like isoform X2 [Cucurbita maxima][more]
XP_023513162.13.1e-8795.07auxin-responsive protein IAA32-like isoform X1 [Cucurbita pepo subsp. pepo][more]
BLAST of Carg01857 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01200.24.1e-3339.69indole-3-acetic acid inducible 32[more]
AT1G15050.12.5e-3062.22indole-3-acetic acid inducible 34[more]
AT2G33310.21.7e-1846.39auxin-induced protein 13[more]
AT1G04550.24.2e-1747.87AUX/IAA transcriptional regulator family protein[more]
AT1G52830.11.4e-1242.05indole-3-acetic acid 6[more]
BLAST of Carg01857 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8RYC6|IAA32_ARATH7.5e-3239.69Auxin-responsive protein IAA32 OS=Arabidopsis thaliana OX=3702 GN=IAA32 PE=1 SV=... [more]
sp|Q9C5X0|IAA34_ARATH4.5e-2962.22Auxin-responsive protein IAA34 OS=Arabidopsis thaliana OX=3702 GN=IAA34 PE=1 SV=... [more]
sp|A2XB18|IAA10_ORYSI1.8e-1750.53Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 P... [more]
sp|Q0DWF2|IAA10_ORYSJ1.8e-1750.53Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10... [more]
sp|Q38831|IAA13_ARATH3.0e-1746.39Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=... [more]
BLAST of Carg01857 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BG83|A0A1S3BG83_CUCME1.8e-5461.73Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489310 PE=3 SV=1[more]
tr|A0A0A0KT91|A0A0A0KT91_CUCSA1.8e-5461.73Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_5G610430 PE=3 SV=1[more]
tr|M5XIB3|M5XIB3_PRUPE2.2e-4150.76Auxin-responsive protein OS=Prunus persica OX=3760 GN=PRUPE_1G317000 PE=3 SV=1[more]
tr|W9S577|W9S577_9ROSA8.5e-4154.69Auxin-responsive protein OS=Morus notabilis OX=981085 GN=L484_017323 PE=3 SV=1[more]
tr|A0A2K1YST0|A0A2K1YST0_POPTR1.9e-4049.50Auxin-responsive protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G119900v3 PE... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom
IPR003311AUX_IAA
IPR033389AUX/IAA_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg01857-RACarg01857-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 103..203
e-value: 2.9E-27
score: 96.6
NoneNo IPR availablePANTHERPTHR31734:SF29AUXIN-RESPONSIVE PROTEIN IAA32-RELATEDcoord: 7..201
NoneNo IPR availableSUPERFAMILYSSF54277CAD & PB1 domainscoord: 105..192
IPR033389AUX/IAA domainPFAMPF02309AUX_IAAcoord: 93..197
e-value: 6.0E-24
score: 85.1
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 7..201
IPR000270PB1 domainPROSITEPS51745PB1coord: 109..197
score: 19.707

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg01857Cla020420Watermelon (97103) v1carwmB0842
Carg01857Csa5G610430Cucumber (Chinese Long) v2carcuB0857
Carg01857MELO3C012276Melon (DHL92) v3.5.1carmeB0834
Carg01857CSPI05G25560Wild cucumber (PI 183967)carcpiB0877
Carg01857Cucsa.283300Cucumber (Gy14) v1carcgyB0968
Carg01857CmaCh04G014880Cucurbita maxima (Rimu)carcmaB1170
Carg01857CmaCh18G009960Cucurbita maxima (Rimu)carcmaB1167
Carg01857CmoCh04G015610Cucurbita moschata (Rifu)carcmoB1138
Carg01857CmoCh18G010050Cucurbita moschata (Rifu)carcmoB1135
Carg01857Lsi04G002230Bottle gourd (USVL1VR-Ls)carlsiB767
Carg01857Cp4.1LG09g03280Cucurbita pepo (Zucchini)carcpeB1169
Carg01857Cp4.1LG01g13870Cucurbita pepo (Zucchini)carcpeB1177
Carg01857MELO3C012276.2Melon (DHL92) v3.6.1carmedB0846
Carg01857CsaV3_5G034610Cucumber (Chinese Long) v3carcucB0881
Carg01857Cla97C05G104280Watermelon (97103) v2carwmbB0878
Carg01857Bhi07G001071Wax gourdcarwgoB0983
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg01857Carg19045Silver-seed gourdcarcarB629
The following block(s) are covering this gene:
GeneOrganismBlock
Carg01857Silver-seed gourdcarcarB538
Carg01857Silver-seed gourdcarcarB617
Carg01857Cucumber (Gy14) v2carcgybB0830
Carg01857Cucumber (Gy14) v2carcgybB0831
Carg01857Cucumber (Gy14) v2carcgybB0836
Carg01857Cucumber (Gy14) v1carcgyB0965
Carg01857Cucurbita maxima (Rimu)carcmaB1160
Carg01857Cucurbita maxima (Rimu)carcmaB1161
Carg01857Cucurbita maxima (Rimu)carcmaB1169
Carg01857Cucurbita moschata (Rifu)carcmoB1130
Carg01857Cucurbita moschata (Rifu)carcmoB1137
Carg01857Cucurbita pepo (Zucchini)carcpeB1175
Carg01857Wild cucumber (PI 183967)carcpiB0876
Carg01857Wild cucumber (PI 183967)carcpiB0883
Carg01857Cucumber (Chinese Long) v2carcuB0856
Carg01857Cucumber (Chinese Long) v2carcuB0863
Carg01857Cucumber (Chinese Long) v3carcucB0887
Carg01857Cucumber (Chinese Long) v3carcucB0880
Carg01857Bottle gourd (USVL1VR-Ls)carlsiB763
Carg01857Bottle gourd (USVL1VR-Ls)carlsiB768
Carg01857Melon (DHL92) v3.5.1carmeB0830
Carg01857Melon (DHL92) v3.5.1carmeB0835
Carg01857Melon (DHL92) v3.6.1carmedB0842
Carg01857Melon (DHL92) v3.6.1carmedB0847
Carg01857Watermelon (Charleston Gray)carwcgB0817
Carg01857Watermelon (Charleston Gray)carwcgB0816
Carg01857Watermelon (Charleston Gray)carwcgB0811
Carg01857Watermelon (97103) v1carwmB0843
Carg01857Watermelon (97103) v1carwmB0846
Carg01857Watermelon (97103) v2carwmbB0880
Carg01857Watermelon (97103) v2carwmbB0870
Carg01857Wax gourdcarwgoB0975
Carg01857Wax gourdcarwgoB0976