Cp4.1LG01g13040 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g13040
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionThiol-disulfide oxidoreductase DCC
LocationCp4.1LG01 : 8473939 .. 8477180 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCTCATGGGCCTCAGGCTGCTTGCGACTGAAGGAAGAGAAGGCAGTTCGGAATCGAAACCTCTCGTTCCATTTCCGAAATGTTCAGGAACGGAGAAAACCGCTGGTGATGATCGATCCAAAATGACGACCAAACTTCTTGCGAATCGGTTTCGGCACCTATTCTTCACATCAACAGGGACAACCAGAGCCACCTCCTTTACTATTACATCTTCTTCTTCCCCATTTCGATGCATATTTTTTTCTAAGTTTTCATCATCGTCACCGTCTTCTTCCGGCATCGATTGCTCTACTGCTGCGCCTCCGGATATTGCCGATGTTCCTGAAGAAGTTGTTGAGGAATTATTCGATGCCGTCTCTCCTGCTGCTGCGAATTCTTCGGCTGTCGAGCTTGTGTTTCCTTCTCTTCTCCAGCCTCGCGTTGTTGTCTATGACGGTGTATGCCATCTCTGCCACCGCGGTTCGATCTCTTTTCTCTCCCTCTTTAAAACGCTCCGTTTACAGTTTCATTCTGGTTCCTCTGTTTCACCAGAATGTGCCATTGCTACCCCTGTAATTTCATTCAAAGAACTAAAGAATGCGCATAATCAGATTTTCATTTTCTTGTATACTTAATATTTAAAGCCACTCCGCCTTCTAGGTTTATTTTTTCCTTAATCTTGTGACATGTTTTCCGTTCTTTTTCCTGTTTTTGTTTATGTTTTTTGGCGGCGGTTTGAATTTTCTTACCTTGTCTTTAACTCTATGAACTGTTCGACATTGGTACCGCCCAACTTTTGGAGGAGTTTGATGTCTCTTAGAACCTGTGAATCTGTGAAAGGAATCCTGACTTTTAGTTCCTCCTTTTTGGTCTGGTATGTATAATTATTTGTAAGAGAAAGAAGGAAACAAATCTTCGCCGCTAGTAATTGAAACCCTCCTGTTCCAACACTGATTTTCGAGCCTTTATCATCTGTATAATTTGGTAACCTGGTAAATTCTATTGTACTCCAAAGTGATAATTGAAAGTTTTATCCAGGTGGGATTACGGGTTCCATGACTTTTAGTCTTACATCGTGTTTCTAGGTCATTTCACTTCCAGACTTCCAGTATATGCTCAAATTCTTAGAGGCTGCATCCTAATATTTCAGTTCCAGAACATTCTGTATCTATCCCTCCATAGTTATGTTTCTATCTTTGTTCTGTTTATCGATAAATTTGCAGGTGTGAAGTGGGTTATAAAGGCGGACAGATATAAGAAGATCAAATTTTGCTGCCTTCAGTCCAAAGCTGCTGAACCATACTTGAGACTGAGTGGTCTAGACAGAGAGGATGTTTACCGTCGCTTTGTGTTCATTGAGGGCCATGGTTCATACTACCAAGCTTCTACCGGTACTTAGCTTTCTTGACCAAGAACAGTTAAAATATCCCTGTGATAACTTCGATCTTTCCCTGTATTCTATAACTGGTGTGCATGTGTAACTCGGTGCTTCATTTACCCTTGTGTATAATTTTTCCCATTAAATGCCTTTCTTATCAAAACTCTAAATTCCCACATAACACTCGAGATTCATTGCTACAGTTAATGTAGCATTTTAGAAAGGAGATTCATTTTCTCTATTTTTGTGTAGATCGACTTATTACTACTAGTGTTACAAAACTTCTGTCAAAATGTATATTGTTCCCTTCTTAATCAGTAGGAATGTAATCCCATTTGAGCAAATTGTGTAATTTTGCAGCTGCTCTGAAGGTCTTGTCCTATTTGCCTCTCCCCTACTCAGCTTTGAGCGCATTCTTGATAATCCCGACTCCTCTTAGAGATGCTATCTATGACATTGTTGCCAAACATCGCTACGACTTGTTTGGAAAAGCCGAAGACTGCTTGGTTTTGCAAGAGGAAGAGCTTCTCGAGCGTTTCATTGATAGGGAGGAACTGCTCGATCAACGCCATCGGTAAGGAAGTATGTGCATTACATTTTATGGACATGGAAATTGTAAATTTTAGTCATTACCCTCCTTTTGGACTAAAGAACCTGATATGAATGTACTTCAGAACTAACTGTTTAGGTAAAAAAAAAAACTTCACCTGTAAGTACTAGTTTGATGGCGAGTATTGTAATGATCAGTTTTAGACAAGAAGCATCAACATCCACAATTCACTTAAAGTAACAGCACTCGTCTTATTACCGTACAGCTAAAACAATTTAGATTGTTCATAAAGACATCAAATGTTTTATATCTCTAAGATTGCTCAAGCCATATAGAAATACACTGATGCAAATTTTGTCCAGCATGACAGCTAAAGGATTCTGTTTGCTTTATCTAAGTTCTATCCTCGTCATTCTAGAGATCTCTGATAGTTCATACAAAAACAAATTCAGCTCATATATCAACAATCCCTTTGATAAAGATCCAGAAGAAAGCAACCAGCTGAACTCGAAAATCAGGTATAACAATAGAACTCTGCCCATCTCAACAAAATATACTCTTGAGGGGGACTTTTGTTAGGTGCCATCGTCACCAGTCCACAGGTTCCAGTCTTTATCAACATGCTCTTGAGCCCATTTGACTGCAGCACGGGCAGCTTGAGGTCCTCCAGGTAATCCTCGTTCGTTGATTGTATCAGACATGTCAATGAAAGGTAGAACCAACAAGGTCCCAGGGCCGCCATACTCAGTATGCATAAAGGTGTTGAATATCTGTTTAGTTGGAAGGCCATAACATAGGTAAAGACATGCAGTTGTTGAGCTATTATGTTCAATCAGAGGATGGCAGTGTTCATACCTCAGTGCATACTCCGACGACCTCTTGAACCGAATCCCCGTAAATATCTTTCTTAGAAAGTTTGGTAAGCAAATGAGCCCTGAACTTCTCGGTCTCCTGAACAGAAAAGAAATTATTTCAAGACATTTCGAAATCATCCATTTACATGAACGCCCAGAAGGGAGGGAGATTACAGCGACGGCGAATTCAGGAATTGGGTCGGGAAATTTGTATTCGGCGGCCCTGCAAATCTGGTTTCCGAAGGAGGAGGAGGGTTGAAATGGAAGCCTGAGAGTGGGCGAGAGGCGTGTGTGTTGCAGAGCACTTGAAGGATTGGAGAAGAAGCACGGCGGAGAGTTAGGTTTATGAAGCGCAAAGAGAGGAGGGAGGAGATGGAAAGCTGGAACTGTAGTCCATGCCATCTTTATCTTCTCACCGGGTTTAGCAAAGGCGTCGAGCAAGGGTTTATCAACGCATCTTCTCTTCGCACCCCCACA

mRNA sequence

ATGGGCCTCATGGGCCTCAGGCTGCTTGCGACTGAAGGAAGAGAAGGCAGTTCGGAATCGAAACCTCTCGTTCCATTTCCGAAATGTTCAGGAACGGAGAAAACCGCTGGTGATGATCGATCCAAAATGACGACCAAACTTCTTGCGAATCGGTTTCGGCACCTATTCTTCACATCAACAGGGACAACCAGAGCCACCTCCTTTACTATTACATCTTCTTCTTCCCCATTTCGATGCATATTTTTTTCTAAGTTTTCATCATCGTCACCGTCTTCTTCCGGCATCGATTGCTCTACTGCTGCGCCTCCGGATATTGCCGATGTTCCTGAAGAAGTTGTTGAGGAATTATTCGATGCCGTCTCTCCTGCTGCTGCGAATTCTTCGGCTGTCGAGCTTGTGTTTCCTTCTCTTCTCCAGCCTCGCGTTGTTGTCTATGACGGTGTATGCCATCTCTGCCACCGCGGTGTGAAGTGGGTTATAAAGGCGGACAGATATAAGAAGATCAAATTTTGCTGCCTTCAGTCCAAAGCTGCTGAACCATACTTGAGACTGAGTGGTCTAGACAGAGAGGATGTTTACCGTCGCTTTGTGTTCATTGAGGGCCATGGTTCATACTACCAAGCTTCTACCGCTGCTCTGAAGGTCTTGTCCTATTTGCCTCTCCCCTACTCAGCTTTGAGCGCATTCTTGATAATCCCGACTCCTCTTAGAGATGCTATCTATGACATTGTTGCCAAACATCGCTACGACTTGTTTGGAAAAGCCGAAGACTGCTTGGTTTTGCAAGAGGAAGAGCTTCTCGAGCGTTTCATTGATAGGGAGGAACTGCTCGATCAACGCCATCGGTAAGGAAGTATGTGCATTACATTTTATGGACATGGAAATTGTAAATTTTAGTCATTACCCTCCTTTTGGACTAAAGAACCTGATATGAATGTACTTCAGAACTAACTGTTTAGGTAAAAAAAAAAACTTCACCTGTAAGTACTAGTTTGATGGCGAGTATTGTAATGATCAGTTTTAGACAAGAAGCATCAACATCCACAATTCACTTAAAGTAACAGCACTCGTCTTATTACCGTACAGCTAAAACAATTTAGATTGTTCATAAAGACATCAAATGTTTTATATCTCTAAGATTGCTCAAGCCATATAGAAATACACTGATGCAAATTTTGTCCAGCATGACAGCTAAAGGATTCTGTTTGCTTTATCTAAGTTCTATCCTCGTCATTCTAGAGATCTCTGATAGTTCATACAAAAACAAATTCAGCTCATATATCAACAATCCCTTTGATAAAGATCCAGAAGAAAGCAACCAGCTGAACTCGAAAATCAGGTATAACAATAGAACTCTGCCCATCTCAACAAAATATACTCTTGAGGGGGACTTTTGTTAGGTGCCATCGTCACCAGTCCACAGGTTCCAGTCTTTATCAACATGCTCTTGAGCCCATTTGACTGCAGCACGGGCAGCTTGAGGTCCTCCAGGTAATCCTCGTTCGTTGATTGTATCAGACATGTCAATGAAAGGTAGAACCAACAAGGTCCCAGGGCCGCCATACTCAGTATGCATAAAGGTGTTGAATATCTGTTTAGTTGGAAGGCCATAACATAGGTAAAGACATGCAGTTGTTGAGCTATTATGTTCAATCAGAGGATGGCAGTGTTCATACCTCAGTGCATACTCCGACGACCTCTTGAACCGAATCCCCGTAAATATCTTTCTTAGAAAGTTTGGTAAGCAAATGAGCCCTGAACTTCTCGGTCTCCTGAACAGAAAAGAAATTATTTCAAGACATTTCGAAATCATCCATTTACATGAACGCCCAGAAGGGAGGGAGATTACAGCGACGGCGAATTCAGGAATTGGGTCGGGAAATTTGTATTCGGCGGCCCTGCAAATCTGGTTTCCGAAGGAGGAGGAGGGTTGAAATGGAAGCCTGAGAGTGGGCGAGAGGCGTGTGTGTTGCAGAGCACTTGAAGGATTGGAGAAGAAGCACGGCGGAGAGTTAGGTTTATGAAGCGCAAAGAGAGGAGGGAGGAGATGGAAAGCTGGAACTGTAGTCCATGCCATCTTTATCTTCTCACCGGGTTTAGCAAAGGCGTCGAGCAAGGGTTTATCAACGCATCTTCTCTTCGCACCCCCACA

Coding sequence (CDS)

ATGGGCCTCATGGGCCTCAGGCTGCTTGCGACTGAAGGAAGAGAAGGCAGTTCGGAATCGAAACCTCTCGTTCCATTTCCGAAATGTTCAGGAACGGAGAAAACCGCTGGTGATGATCGATCCAAAATGACGACCAAACTTCTTGCGAATCGGTTTCGGCACCTATTCTTCACATCAACAGGGACAACCAGAGCCACCTCCTTTACTATTACATCTTCTTCTTCCCCATTTCGATGCATATTTTTTTCTAAGTTTTCATCATCGTCACCGTCTTCTTCCGGCATCGATTGCTCTACTGCTGCGCCTCCGGATATTGCCGATGTTCCTGAAGAAGTTGTTGAGGAATTATTCGATGCCGTCTCTCCTGCTGCTGCGAATTCTTCGGCTGTCGAGCTTGTGTTTCCTTCTCTTCTCCAGCCTCGCGTTGTTGTCTATGACGGTGTATGCCATCTCTGCCACCGCGGTGTGAAGTGGGTTATAAAGGCGGACAGATATAAGAAGATCAAATTTTGCTGCCTTCAGTCCAAAGCTGCTGAACCATACTTGAGACTGAGTGGTCTAGACAGAGAGGATGTTTACCGTCGCTTTGTGTTCATTGAGGGCCATGGTTCATACTACCAAGCTTCTACCGCTGCTCTGAAGGTCTTGTCCTATTTGCCTCTCCCCTACTCAGCTTTGAGCGCATTCTTGATAATCCCGACTCCTCTTAGAGATGCTATCTATGACATTGTTGCCAAACATCGCTACGACTTGTTTGGAAAAGCCGAAGACTGCTTGGTTTTGCAAGAGGAAGAGCTTCTCGAGCGTTTCATTGATAGGGAGGAACTGCTCGATCAACGCCATCGGTAA

Protein sequence

MGLMGLRLLATEGREGSSESKPLVPFPKCSGTEKTAGDDRSKMTTKLLANRFRHLFFTSTGTTRATSFTITSSSSPFRCIFFSKFSSSSPSSSGIDCSTAAPPDIADVPEEVVEELFDAVSPAAANSSAVELVFPSLLQPRVVVYDGVCHLCHRGVKWVIKADRYKKIKFCCLQSKAAEPYLRLSGLDREDVYRRFVFIEGHGSYYQASTAALKVLSYLPLPYSALSAFLIIPTPLRDAIYDIVAKHRYDLFGKAEDCLVLQEEELLERFIDREELLDQRHR
Homology
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BLAST of Cp4.1LG01g13040 vs. Swiss-Prot
Match: YUXK_BACSU (Uncharacterized protein YuxK OS=Bacillus subtilis (strain 168) GN=yuxK PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-19
Identity = 54/131 (41.22%), Postives = 79/131 (60.31%), Query Frame = 1 

Query: 141 RVVVYDGVCHLCHRGVKWVIKADRYKKIKFCCLQSKAAEPYLRLSGLDREDVYRRFVFIE 200
           RV+++DGVC+LC+  V+++IK D    I F  LQS+  +  L+ SGL   D +  FVFIE
Sbjct: 9   RVLLFDGVCNLCNGAVQFIIKRDPDGLISFTSLQSETGQSLLKKSGLPT-DRFDSFVFIE 68

Query: 201 GHGSYYQASTAALKVLSYLPLPYSALSAFLIIPTPLRDAIYDIVAKHRYDLFGKAEDCLV 260
             G  Y  STAA+KV  +L  P+     F  +P P+RD +Y  +AK+RY  FGK  +C+ 
Sbjct: 69  D-GQVYTKSTAAIKVFRHLRGPWRLFVLFFAVPKPVRDMVYSFIAKNRYKWFGKKNECM- 128

Query: 261 LQEEELLERFI 272
           L    + +RF+
Sbjct: 129 LPSPSIKKRFL 136

[Close]
BLAST of Cp4.1LG01g13040 vs. Swiss-Prot
Match: Y1259_ARATH (DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana GN=At1g52590 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.0e-16
Identity = 47/118 (39.83%), Postives = 75/118 (63.56%), Query Frame = 1 

Query: 142 VVVYDGVCHLCHRGVKWVIKADRYKKIKFCCLQSKAAEPYLRLSGLDREDVYRRFVFIEG 201
           ++++DGVC+LC+ GVK+V   DR + I+F  LQS+A +  L  SG   +D+    V +E 
Sbjct: 55  IMLFDGVCNLCNGGVKFVRDHDRNRSIRFEALQSEAGKKLLLRSGRAPDDI-SSVVLVEN 114

Query: 202 HGSYYQASTAALKVLSYLPLPYSALSAFL-IIPTPLRDAIYDIVAKHRYDLFGKAEDC 259
             SY + S A LK++ Y+ LP+  L+ FL   P  +RD +Y+ VA +RY +FG+++ C
Sbjct: 115 DRSYIK-SEAVLKIMKYIDLPFPQLAFFLQFAPLFVRDFLYENVANNRYAMFGRSDSC 170

[Close]
BLAST of Cp4.1LG01g13040 vs. TrEMBL
Match: A0A0A0KVQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603330 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.6e-97
Identity = 191/241 (79.25%), Postives = 208/241 (86.31%), Query Frame = 1 

Query: 43  MTTKLLANRFRHLFFTSTGTTRATSFTITSSSSPFRCIFFSKFSSSSPSSSGIDCSTAAP 102
           M +KLL+NRFR L  TST T R TSFT + S S FR +F SKFSS   SS GIDCSTAAP
Sbjct: 1   MASKLLSNRFRQLVLTSTATIRPTSFTTSFSFSSFRRVFSSKFSSPLSSSFGIDCSTAAP 60

Query: 103 PDIADVPEEVVEELFDAVSPAAA-NSSAVELVFPSLLQPRVVVYDGVCHLCHRGVKWVIK 162
            DIADVPEEVV++  D VSPA A NS A E VFP+LLQPRVV+YDGVCHLCHRGVKWVIK
Sbjct: 61  ADIADVPEEVVKDYVDVVSPAVAVNSLAAEPVFPTLLQPRVVIYDGVCHLCHRGVKWVIK 120

Query: 163 ADRYKKIKFCCLQSKAAEPYLRLSGLDREDVYRRFVFIEGHGSYYQASTAALKVLSYLPL 222
            D+YKKIKFCCLQSK AEPYLRLSGLDREDV  RFVFIEGHGSY+QASTAAL+VLSYLPL
Sbjct: 121 VDKYKKIKFCCLQSKTAEPYLRLSGLDREDVSHRFVFIEGHGSYHQASTAALRVLSYLPL 180

Query: 223 PYSALSAFLIIPTPLRDAIYDIVAKHRYDLFGKAEDCLVLQEEELLERFIDREELLDQRH 282
           PYSALSAFLIIPTPLRD+IYD VA+HRYD+F KAE CLVLQ+EELLERFIDREELL+QRH
Sbjct: 181 PYSALSAFLIIPTPLRDSIYDTVARHRYDMFVKAEGCLVLQDEELLERFIDREELLNQRH 240

[Close]
BLAST of Cp4.1LG01g13040 vs. TrEMBL
Match: A0A067JEX1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21774 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-69
Identity = 149/232 (64.22%), Postives = 179/232 (77.16%), Query Frame = 1 

Query: 56  FFTSTGTTRATSFTITSSSSP----FRCIFFSKFSSSS---PSSSGIDCSTAAPPDIADV 115
           ++T+T T R   F  +SSS       +C  FS FSSSS   PS + I   TAA   +ADV
Sbjct: 8   YWTATSTPRNAQFFSSSSSFSSSCLLKCSLFSSFSSSSFPFPSPTDIVSDTAAA--VADV 67

Query: 116 PEEVVEELFDAVSPAAANSSAVELVFPSLLQPRVVVYDGVCHLCHRGVKWVIKADRYKKI 175
             E  + L+  VS    +S+   +  P+LLQPRVVVYDGVCHLCHRGVKWVIKAD+Y+KI
Sbjct: 68  VPEAEDLLYPDVS---ISSTVKPVTAPTLLQPRVVVYDGVCHLCHRGVKWVIKADKYRKI 127

Query: 176 KFCCLQSKAAEPYLRLSGLDREDVYRRFVFIEGHGSYYQASTAALKVLSYLPLPYSALSA 235
           KFCCLQSKAAEPYLRL GLDREDV RRF+FIEG G Y+QASTAAL+VL+YLPLPYSALS 
Sbjct: 128 KFCCLQSKAAEPYLRLCGLDREDVLRRFLFIEGLGQYHQASTAALRVLAYLPLPYSALST 187

Query: 236 FLIIPTPLRDAIYDIVAKHRYDLFGKAEDCLVLQEEELLERFIDREELLDQR 281
            LI+PTPLRDA+YD +A+ RYD FGKAEDCLVL+++ELLERFIDR+E++D+R
Sbjct: 188 LLIVPTPLRDAVYDHIARRRYDWFGKAEDCLVLKDKELLERFIDRDEMIDKR 234

[Close]
BLAST of Cp4.1LG01g13040 vs. TrEMBL
Match: A0A061E6T8_THECC (Thiol-disulfide oxidoreductase DCC OS=Theobroma cacao GN=TCM_010207 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.7e-65
Identity = 122/153 (79.74%), Postives = 142/153 (92.81%), Query Frame = 1 

Query: 127 SSAVELVFPSLLQPRVVVYDGVCHLCHRGVKWVIKADRYKKIKFCCLQSKAAEPYLRLSG 186
           S+ V+ + P++LQPRVV+YDGVCHLCH+GVKWVIKAD+Y+KIKFCC+QSKAAEPYLR+ G
Sbjct: 86  STTVKPLLPNVLQPRVVIYDGVCHLCHQGVKWVIKADKYRKIKFCCVQSKAAEPYLRVCG 145

Query: 187 LDREDVYRRFVFIEGHGSYYQASTAALKVLSYLPLPYSALSAFLIIPTPLRDAIYDIVAK 246
           +DREDV RRFVFIEG G Y+QASTAAL+VLSYLPLPYSALSAFLIIPTPLRDA+YD VAK
Sbjct: 146 VDREDVLRRFVFIEGLGVYHQASTAALRVLSYLPLPYSALSAFLIIPTPLRDAVYDHVAK 205

Query: 247 HRYDLFGKAEDCLVLQEEELLERFIDREELLDQ 280
            RYD FGK+EDCLVLQE ELL+RFIDREE++D+
Sbjct: 206 RRYDWFGKSEDCLVLQENELLKRFIDREEMMDR 238

[Close]
BLAST of Cp4.1LG01g13040 vs. TrEMBL
Match: A0A0B0MPR5_GOSAR (Putative yuxK OS=Gossypium arboreum GN=F383_25914 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.4e-64
Identity = 137/211 (64.93%), Postives = 159/211 (75.36%), Query Frame = 1 

Query: 69  TITSSSSPFRCIFFSKFSSSSPSSSGIDCSTAAPPDIADVPEEVVEELFDAVSPAAANSS 128
           T    S PF   +   FS SS S   I   TA   D+A     V+    D V      S+
Sbjct: 84  TTAKPSPPFSLKYLLLFSLSSASEK-ILAGTAT--DVA-----VISGKSDLVYSDPPVSA 143

Query: 129 AVELVFPSLLQPRVVVYDGVCHLCHRGVKWVIKADRYKKIKFCCLQSKAAEPYLRLSGLD 188
            ++ + P LLQPRVV+YDGVCHLCH GVKWVIKAD+++KIKFCC+QSKAAEPYLR+ G+D
Sbjct: 144 TIKPLLPDLLQPRVVIYDGVCHLCHEGVKWVIKADKHRKIKFCCVQSKAAEPYLRVCGVD 203

Query: 189 REDVYRRFVFIEGHGSYYQASTAALKVLSYLPLPYSALSAFLIIPTPLRDAIYDIVAKHR 248
           REDV RRFVFIEG G Y+Q STAAL+VLSYLPLPYSALSAFLIIPTPLRDA+YD +AK R
Sbjct: 204 REDVLRRFVFIEGLGLYHQGSTAALRVLSYLPLPYSALSAFLIIPTPLRDAVYDFIAKRR 263

Query: 249 YDLFGKAEDCLVLQEEELLERFIDREELLDQ 280
           YD FGK+EDCLVLQE ELLERFIDREE++D+
Sbjct: 264 YDWFGKSEDCLVLQESELLERFIDREEMMDR 286

[Close]
BLAST of Cp4.1LG01g13040 vs. TrEMBL
Match: M5Y6J8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022484mg PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.1e-64
Identity = 130/187 (69.52%), Postives = 151/187 (80.75%), Query Frame = 1 

Query: 91  SSSGIDCSTAAPPDIADVPEEVVEELFDAVSPAAANSSAVELVFPSLLQPRVVVYDGVCH 150
           +   +   TAA  D  D+ +E  E+     S   A+S AV+ V P+LLQPRVVVYDGVCH
Sbjct: 331 TGEAVKSDTAA--DAVDLGDEEEEDDVPIYSNPTADS-AVKPVIPTLLQPRVVVYDGVCH 390

Query: 151 LCHRGVKWVIKADRYKKIKFCCLQSKAAEPYLRLSGLDREDVYRRFVFIEGHGSYYQAST 210
           LCH GVKWVIKAD+Y+KIKFCCLQS  AEPYLRL GLDREDV RRF+F+EG G Y+Q ST
Sbjct: 391 LCHGGVKWVIKADKYRKIKFCCLQSVTAEPYLRLCGLDREDVLRRFLFVEGPGLYHQGST 450

Query: 211 AALKVLSYLPLPYSALSAFLIIPTPLRDAIYDIVAKHRYDLFGKAEDCLVLQEEELLERF 270
           AALKVLSYLPLPYSALSAF +IPTPLR+ +YD VAK RYD+FGK+EDCLVLQE+ELLERF
Sbjct: 451 AALKVLSYLPLPYSALSAFRVIPTPLREIVYDYVAKRRYDIFGKSEDCLVLQEKELLERF 510

Query: 271 IDREELL 278
           IDREE++
Sbjct: 511 IDREEIM 514

[Close]
BLAST of Cp4.1LG01g13040 vs. TAIR10
Match: AT1G24095.1 (AT1G24095.1 Putative thiol-disulphide oxidoreductase DCC)

HSP 1 Score: 240.4 bits (612), Expect = 1.4e-63
Identity = 124/196 (63.27%), Postives = 154/196 (78.57%), Query Frame = 1 

Query: 85  FSSSSPS-SSGIDCSTAAPPDIADVPEEVVEELFDAVSPAAANSSAVELVFPSLLQPRVV 144
           FS+ SP+ S+G    T A  D  +V          A    A + + + ++ P  LQPRVV
Sbjct: 26  FSAPSPAFSTGAISRTTAEIDADEVT---------ACLDPAESVTKIPVIMPGNLQPRVV 85

Query: 145 VYDGVCHLCHRGVKWVIKADRYKKIKFCCLQSKAAEPYLRLSGLDREDVYRRFVFIEGHG 204
           VYDGVCHLCH GVKW+IKAD+Y+KIKFCCLQSKAAEPYL +SG+ REDV +RF+FIEG G
Sbjct: 86  VYDGVCHLCHGGVKWIIKADKYRKIKFCCLQSKAAEPYLEVSGVTREDVQKRFLFIEGLG 145

Query: 205 SYYQASTAALKVLSYLPLPYSALSAFLIIPTPLRDAIYDIVAKHRYDLFGKAEDCLVLQE 264
            Y+QASTAAL+V+SYLPLPYSAL+AF I+PTPLRD++YD VAK+RYD FGKAEDCLVL +
Sbjct: 146 FYHQASTAALRVVSYLPLPYSALNAFSIVPTPLRDSVYDYVAKNRYDWFGKAEDCLVLND 205

Query: 265 EELLERFIDREELLDQ 280
           +ELLERFIDR+EL+++
Sbjct: 206 KELLERFIDRDELINR 212

[Close]
BLAST of Cp4.1LG01g13040 vs. TAIR10
Match: AT1G52590.1 (AT1G52590.1 Putative thiol-disulphide oxidoreductase DCC)

HSP 1 Score: 86.3 bits (212), Expect = 3.4e-17
Identity = 47/118 (39.83%), Postives = 75/118 (63.56%), Query Frame = 1 

Query: 142 VVVYDGVCHLCHRGVKWVIKADRYKKIKFCCLQSKAAEPYLRLSGLDREDVYRRFVFIEG 201
           ++++DGVC+LC+ GVK+V   DR + I+F  LQS+A +  L  SG   +D+    V +E 
Sbjct: 55  IMLFDGVCNLCNGGVKFVRDHDRNRSIRFEALQSEAGKKLLLRSGRAPDDI-SSVVLVEN 114

Query: 202 HGSYYQASTAALKVLSYLPLPYSALSAFL-IIPTPLRDAIYDIVAKHRYDLFGKAEDC 259
             SY + S A LK++ Y+ LP+  L+ FL   P  +RD +Y+ VA +RY +FG+++ C
Sbjct: 115 DRSYIK-SEAVLKIMKYIDLPFPQLAFFLQFAPLFVRDFLYENVANNRYAMFGRSDSC 170

[Close]
BLAST of Cp4.1LG01g13040 vs. NCBI nr
Match: gi|659090878|ref|XP_008446251.1| (PREDICTED: uncharacterized protein LOC103489038 [Cucumis melo])

HSP 1 Score: 365.2 bits (936), Expect = 1.1e-97
Identity = 191/240 (79.58%), Postives = 206/240 (85.83%), Query Frame = 1 

Query: 43  MTTKLLANRFRHLFFTSTGTTRATSFTITSSSSPFRCIFFSKFSSSSPSSSGIDCSTAAP 102
           M TKLL N FRHL FTST T R TSFT +SS S FR +F SKFSS  PSSSGIDCSTAAP
Sbjct: 1   MATKLLTNGFRHLVFTSTATIRPTSFTTSSSLSSFRRVFLSKFSSPLPSSSGIDCSTAAP 60

Query: 103 PDIADVPEEVVEELFDAVSPAAA-NSSAVELVFPSLLQPRVVVYDGVCHLCHRGVKWVIK 162
            +I DVPEEVV +  DAVSPA A NSSA + VFP+LLQPRVV+YDGVCHLCHRGVKWVIK
Sbjct: 61  ANIGDVPEEVVGDYVDAVSPAVAVNSSAAQPVFPTLLQPRVVIYDGVCHLCHRGVKWVIK 120

Query: 163 ADRYKKIKFCCLQSKAAEPYLRLSGLDREDVYRRFVFIEGHGSYYQASTAALKVLSYLPL 222
            D+YKKIKFCCLQSK AEPYLRLSGLDRE V  RFVFIEGHGSY+Q STAAL+VLSYLPL
Sbjct: 121 VDKYKKIKFCCLQSKTAEPYLRLSGLDREHVSHRFVFIEGHGSYHQGSTAALRVLSYLPL 180

Query: 223 PYSALSAFLIIPTPLRDAIYDIVAKHRYDLFGKAEDCLVLQEEELLERFIDREELLDQRH 282
           PYSALSAFLIIP PLRD+IYD VA+HRYD+F KAE CLVL +EELLERFIDREELL+QRH
Sbjct: 181 PYSALSAFLIIPAPLRDSIYDTVARHRYDMFVKAEGCLVLLDEELLERFIDREELLNQRH 240

[Close]
BLAST of Cp4.1LG01g13040 vs. NCBI nr
Match: gi|449434879|ref|XP_004135223.1| (PREDICTED: uncharacterized protein LOC101209995 [Cucumis sativus])

HSP 1 Score: 364.0 bits (933), Expect = 2.4e-97
Identity = 191/241 (79.25%), Postives = 208/241 (86.31%), Query Frame = 1 

Query: 43  MTTKLLANRFRHLFFTSTGTTRATSFTITSSSSPFRCIFFSKFSSSSPSSSGIDCSTAAP 102
           M +KLL+NRFR L  TST T R TSFT + S S FR +F SKFSS   SS GIDCSTAAP
Sbjct: 1   MASKLLSNRFRQLVLTSTATIRPTSFTTSFSFSSFRRVFSSKFSSPLSSSFGIDCSTAAP 60

Query: 103 PDIADVPEEVVEELFDAVSPAAA-NSSAVELVFPSLLQPRVVVYDGVCHLCHRGVKWVIK 162
            DIADVPEEVV++  D VSPA A NS A E VFP+LLQPRVV+YDGVCHLCHRGVKWVIK
Sbjct: 61  ADIADVPEEVVKDYVDVVSPAVAVNSLAAEPVFPTLLQPRVVIYDGVCHLCHRGVKWVIK 120

Query: 163 ADRYKKIKFCCLQSKAAEPYLRLSGLDREDVYRRFVFIEGHGSYYQASTAALKVLSYLPL 222
            D+YKKIKFCCLQSK AEPYLRLSGLDREDV  RFVFIEGHGSY+QASTAAL+VLSYLPL
Sbjct: 121 VDKYKKIKFCCLQSKTAEPYLRLSGLDREDVSHRFVFIEGHGSYHQASTAALRVLSYLPL 180

Query: 223 PYSALSAFLIIPTPLRDAIYDIVAKHRYDLFGKAEDCLVLQEEELLERFIDREELLDQRH 282
           PYSALSAFLIIPTPLRD+IYD VA+HRYD+F KAE CLVLQ+EELLERFIDREELL+QRH
Sbjct: 181 PYSALSAFLIIPTPLRDSIYDTVARHRYDMFVKAEGCLVLQDEELLERFIDREELLNQRH 240

[Close]
BLAST of Cp4.1LG01g13040 vs. NCBI nr
Match: gi|802787902|ref|XP_012092041.1| (PREDICTED: uncharacterized protein LOC105649843 [Jatropha curcas])

HSP 1 Score: 271.6 bits (693), Expect = 1.6e-69
Identity = 149/232 (64.22%), Postives = 179/232 (77.16%), Query Frame = 1 

Query: 56  FFTSTGTTRATSFTITSSSSP----FRCIFFSKFSSSS---PSSSGIDCSTAAPPDIADV 115
           ++T+T T R   F  +SSS       +C  FS FSSSS   PS + I   TAA   +ADV
Sbjct: 8   YWTATSTPRNAQFFSSSSSFSSSCLLKCSLFSSFSSSSFPFPSPTDIVSDTAAA--VADV 67

Query: 116 PEEVVEELFDAVSPAAANSSAVELVFPSLLQPRVVVYDGVCHLCHRGVKWVIKADRYKKI 175
             E  + L+  VS    +S+   +  P+LLQPRVVVYDGVCHLCHRGVKWVIKAD+Y+KI
Sbjct: 68  VPEAEDLLYPDVS---ISSTVKPVTAPTLLQPRVVVYDGVCHLCHRGVKWVIKADKYRKI 127

Query: 176 KFCCLQSKAAEPYLRLSGLDREDVYRRFVFIEGHGSYYQASTAALKVLSYLPLPYSALSA 235
           KFCCLQSKAAEPYLRL GLDREDV RRF+FIEG G Y+QASTAAL+VL+YLPLPYSALS 
Sbjct: 128 KFCCLQSKAAEPYLRLCGLDREDVLRRFLFIEGLGQYHQASTAALRVLAYLPLPYSALST 187

Query: 236 FLIIPTPLRDAIYDIVAKHRYDLFGKAEDCLVLQEEELLERFIDREELLDQR 281
            LI+PTPLRDA+YD +A+ RYD FGKAEDCLVL+++ELLERFIDR+E++D+R
Sbjct: 188 LLIVPTPLRDAVYDHIARRRYDWFGKAEDCLVLKDKELLERFIDRDEMIDKR 234

[Close]
BLAST of Cp4.1LG01g13040 vs. NCBI nr
Match: gi|645281082|ref|XP_008245467.1| (PREDICTED: DCC family protein At1g52590, chloroplastic [Prunus mume])

HSP 1 Score: 271.2 bits (692), Expect = 2.1e-69
Identity = 143/209 (68.42%), Postives = 171/209 (81.82%), Query Frame = 1 

Query: 69  TITSSSSPFRCIFFSKFSSSSPSSSGIDCSTAAPPDIADVPEEVVEELFDAVSPAAANSS 128
           +++SSS P +C F S  SSSS SSS +  STAA  D  D+ +E   ++    +P A   S
Sbjct: 18  SLSSSSFPLKCSFSSTSSSSSLSSSDVVSSTAA--DAVDLGDEEDNDVPIYSNPTAP--S 77

Query: 129 AVELVFPSLLQPRVVVYDGVCHLCHRGVKWVIKADRYKKIKFCCLQSKAAEPYLRLSGLD 188
           AV+ + P+LLQPRVVVYDGVCHLCH GVKWVIKAD+Y+KIKFCCLQS+ AEPYLRL GLD
Sbjct: 78  AVKPMIPTLLQPRVVVYDGVCHLCHGGVKWVIKADKYRKIKFCCLQSETAEPYLRLCGLD 137

Query: 189 REDVYRRFVFIEGHGSYYQASTAALKVLSYLPLPYSALSAFLIIPTPLRDAIYDIVAKHR 248
           REDV RRF+F+EG G Y+Q STAALKVLSYLPLPYSALSAF++IPTPLR+ +YD VAK R
Sbjct: 138 REDVLRRFLFVEGPGLYHQGSTAALKVLSYLPLPYSALSAFMVIPTPLREIVYDYVAKRR 197

Query: 249 YDLFGKAEDCLVLQEEELLERFIDREELL 278
           YD+FGK+EDCLVLQE+ELLERFIDREE++
Sbjct: 198 YDIFGKSEDCLVLQEKELLERFIDREEIM 222

[Close]
BLAST of Cp4.1LG01g13040 vs. NCBI nr
Match: gi|694361608|ref|XP_009360467.1| (PREDICTED: DCC family protein At1g52590, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 263.8 bits (673), Expect = 3.3e-67
Identity = 136/211 (64.45%), Postives = 173/211 (81.99%), Query Frame = 1 

Query: 69  TITSSSSPFRCIFFSKFSSSSPSSSGIDCSTAAPPDIADVPEEVVEELFDAVSPAAANSS 128
           +++S S  F+C+F    SS+SPS   +  STAA  ++ D+ E+  +++    +P A  S+
Sbjct: 19  SLSSPSPSFKCLF----SSNSPSPRDVVSSTAA--NVVDLGEDEDDDVPVYCNPTA--SA 78

Query: 129 AVELVFPSLLQPRVVVYDGVCHLCHRGVKWVIKADRYKKIKFCCLQSKAAEPYLRLSGLD 188
           A ++V P+LLQP VVVYDGVCHLCH GVKWVIKAD+Y+KIKFCC+QS+ AEPYLRL GLD
Sbjct: 79  AAKIVQPTLLQPGVVVYDGVCHLCHGGVKWVIKADKYRKIKFCCVQSETAEPYLRLCGLD 138

Query: 189 REDVYRRFVFIEGHGSYYQASTAALKVLSYLPLPYSALSAFLIIPTPLRDAIYDIVAKHR 248
           REDV RRF+F+EG G Y+Q STAALKVLSYLPLPYSALSAF++IPTPLR+ +YD VAK R
Sbjct: 139 REDVLRRFLFVEGPGLYHQGSTAALKVLSYLPLPYSALSAFMVIPTPLREMVYDYVAKRR 198

Query: 249 YDLFGKAEDCLVLQEEELLERFIDREELLDQ 280
           YD+FGK+EDCLVL+E+ELLERFIDREE++D+
Sbjct: 199 YDIFGKSEDCLVLREKELLERFIDREEIMDR 221

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g13040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YUXK_BACSU1.5e-1941.22Uncharacterized protein YuxK OS=Bacillus subtilis (strain 168) GN=yuxK PE=3 SV=1[more]
Y1259_ARATH6.0e-1639.83DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana GN=At1g52590... [more]
BLAST of Cp4.1LG01g13040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVQ2_CUCSA1.6e-9779.25Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603330 PE=4 SV=1[more]
A0A067JEX1_JATCU1.1e-6964.22Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21774 PE=4 SV=1[more]
A0A061E6T8_THECC1.7e-6579.74Thiol-disulfide oxidoreductase DCC OS=Theobroma cacao GN=TCM_010207 PE=4 SV=1[more]
A0A0B0MPR5_GOSAR2.4e-6464.93Putative yuxK OS=Gossypium arboreum GN=F383_25914 PE=4 SV=1[more]
M5Y6J8_PRUPE4.1e-6469.52Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022484mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g13040 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G24095.11.4e-6363.27 Putative thiol-disulphide oxidoreductase DCC[more]
AT1G52590.13.4e-1739.83 Putative thiol-disulphide oxidoreductase DCC[more]
BLAST of Cp4.1LG01g13040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090878|ref|XP_008446251.1|1.1e-9779.58PREDICTED: uncharacterized protein LOC103489038 [Cucumis melo][more]
gi|449434879|ref|XP_004135223.1|2.4e-9779.25PREDICTED: uncharacterized protein LOC101209995 [Cucumis sativus][more]
gi|802787902|ref|XP_012092041.1|1.6e-6964.22PREDICTED: uncharacterized protein LOC105649843 [Jatropha curcas][more]
gi|645281082|ref|XP_008245467.1|2.1e-6968.42PREDICTED: DCC family protein At1g52590, chloroplastic [Prunus mume][more]
gi|694361608|ref|XP_009360467.1|3.3e-6764.45PREDICTED: DCC family protein At1g52590, chloroplastic [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007263DUF393
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g13040.1Cp4.1LG01g13040.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007263Protein of unknown function DUF393PFAMPF04134DUF393coord: 143..254
score: 7.5
NoneNo IPR availablePANTHERPTHR33639FAMILY NOT NAMEDcoord: 51..280
score: 4.1
NoneNo IPR availablePANTHERPTHR33639:SF1THIOL-DISULFIDE OXIDOREDUCTASE DCC-RELATEDcoord: 51..280
score: 4.1