CmoCh04G016660 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G016660
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPutative thiol-disulphide oxidoreductase DCC
LocationCmo_Chr04 : 8473493 .. 8476058 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCTCAGGCTGCTTGCGACTGAAGGAAGAGAAGGCAGTTCGGAATCGAAACCTCTCGTTCCATTTCCGAAATGTTCAGAAACAGAGAAAACCGCTGGTGATGATCGATCCAAAATGACGACCAAACTTCTTGCGAATCGGTTTCGGCACCTATTCTTCACATCAACAGGGACAACCAGAGCCACCTCCTTTACTATTACATCTTCTTCTTCCCCATTTCGATGCATATCTTTTTCTAAATTTTCATCACCGTCAACGTATTCTTCCGGCATCGATTGCTCTACTGCTGCGCCTCCGGATATTGCCGATGTTCCTGAAGAAGTTGTTGAGGAATTATTCGATGCCGTCTCTCCTGCTGCTGCGAAATCTTCGGCTGTCGAGCTTGTGTTTCCTTCTCTTCTCCAGCCTCGCGTTGTTGTCTATGACGGTGTCTGCCATCTCTGCCACCGCGGTTCGATCTCTTTTCTCTCCCTCTTTAAAACGCTCCGTATACAGTTTCATTCTGGTTCCTCTGTTTCACGAGAATGTGCCATTGCTACCCCTGTAATTTCATTCAAAGAACTAAAGAATGCGCATAATCAGATTGTCATTTTCTTGTATACTTAATATTTAAAGCCACTCCGCCTTCTAGGTTTTTTTTTTTTTTTTTTTTTTCCCTTAATCTTGTGACATCTTTTCCGTTCTTTTTCCTGTTTTTGTTTATGTCTTTTAGCGGCGTTTTGAATTTCCTTACCTTGTCTTTAACTCTATGAACTGTTCGACATTGGTACCGCCCAACTTTTGGAGGAGTTTGATGGCTCTTAGAACCTGTGAATCTGTGAAAGGAATCCTGACTTTTACTTCCTCCTTTTTGGTCTGGTATGTATAATTACTTGTGAGAGAAAGAAGGAAACAAATCTTCGCCGCTATTAATTGAAACCTTCCTGTTCCAACACTGATTTTCGAGTCTTTATCATCTGTATAATTTGGTAACCTGATAAATTCTATTGTACTCCAAAGTGATGATTGAAAGTTTTATCCAGGTGGGATTACGGGTTCCATGACTTTTAGTCTTACATCGTGTTTCTAGGTTATTTCACTTCCAGACTTCCAGTATATGCTCAAATTCTTAGAGGCTGCATCCTAATATTTCACTTCCAGAACATTCTGTATCTATCCCTCCATAGTTATGTTTCTATCTTTGTTCTGCTTATCGATAAATTTGCAGGTGTGAAGTGGGTTATAAAGGCGGACAAATATAAGAAGATCAAATTTTGCTGCCTTCAGTCCAAAGCTGCTGAACCATACTTGAGACTGAGTGGTTTAGACAGAGAGGATGTTTACCGTCGCTTTGTGTTCATTGAGGGCCATGGTTCATACTACCAAGCTTCTACCGGTACTTATCCTTCTTGACCAAGTACAGTTAAAATATCCCTGTGACAACTTCGATCTTTCACTGTATTCTATAACTGGTGTGCATGTGTAACTCGATGCTTCATTTACCCTTGTGTATGATTTTTCCCATTAAATGCCTTTCTTATCAAAACTCTAAATTCCCACATAACACTCGAGATTCATTGCTACAGTTAATGTAGCATTTTAGAAAGGAGATTCATTCTCTATTTTTGTGTAGATTGACTTATTACTACTAGTGTTACAAAACTTCTGTCAAAATGTATATTGTTCCCTTCTTAATCAGTAGGAATGTGATCCCATTTGAGCAAATTGTGTAATTTTGCAGCTGCTCTGAAGGTATTGTCCTATTTGCCTCTCCCCTACTCAGCTTTGAGCGTATTCTTGATAATCCCGACTCCTCTTAGAGATGCTGTCTATGACATTGTTGCCAAACATCGCTACGACTTGTTTGGAAAAGCCAAAGACTGCTTGGTTTTGCAAGAGGAAGAGCTTCTCGAGCGTTTCATTGATAGGGAGGAACTGCTCGATCAACGCCATCGGTAAGGAAGTATGTGCATTATTACATTTTTTTGGACATGGAAATTGTAAATTTTAGTCATTACCCTCCTTTTGGACTAAAGAACCTGATATGAATGTACTTCAGAACTAACTGTTTAGGTAAAAAAAAAACTTCACCTGTAAGTACTAGTTTGATGGCGAGTATTGTAATGATCAGTTTTAGACAAGAAGCATCAACATCCACAATTCACTTAAAGTAACAGCACTCATCTTACCGTACAGCTAAAACAATTTAGATTGTTCATAAAGACATCAAATGTTTTATATCTCTAAGATTGCTCAAGCCATATAGAAATACACTGATGCAAATTTTGTCCAGCATGACAGCTAAAAGATTCTGTTTGCTTTATCTAAGTTCTATCCTCGTCATTCTTGAGATCTCTGATAGTTCATACAAAAACAAATTCAGCTCATATATCAACAATCCCTTTGATAAAGATCCAGAAGAAAGCAACCAGCTGAACTCGATAATCAGGTATAACAATAGAACTCTGCCCATCTCAACAAAATATATTCTTGAGAGGGGCTTTTGTTAGGTGCCATCGTCACCAGTCCACAGGTTCCAGTCTTTATCAACATGCTCTTGAGCCCATTTGACTGCAGCACGGGC

mRNA sequence

ATGGGCCTCAGGCTGCTTGCGACTGAAGGAAGAGAAGGCAGTTCGGAATCGAAACCTCTCGTTCCATTTCCGAAATGTTCAGAAACAGAGAAAACCGCTGGTGATGATCGATCCAAAATGACGACCAAACTTCTTGCGAATCGGTTTCGGCACCTATTCTTCACATCAACAGGGACAACCAGAGCCACCTCCTTTACTATTACATCTTCTTCTTCCCCATTTCGATGCATATCTTTTTCTAAATTTTCATCACCGTCAACGTATTCTTCCGGCATCGATTGCTCTACTGCTGCGCCTCCGGATATTGCCGATGTTCCTGAAGAAGTTGTTGAGGAATTATTCGATGCCGTCTCTCCTGCTGCTGCGAAATCTTCGGCTGTCGAGCTTGTGTTTCCTTCTCTTCTCCAGCCTCGCGTTGTTGTCTATGACGGTGTCTGCCATCTCTGCCACCGCGGTTCGATCTCTTTTCTCTCCCTCTTTAAAACGCTCCGTATACAGTTTCATTCTGGTTCCTCTGTTTCACGAGAATGTGCCATTGCTACCCCTCGGCGTTTTGAATTTCCTTACCTTGTCTTTAACTCTATGAACTGTTCGACATTGGTACCGCCCAACTTTTGGAGGAGTTTGATGGCTCTTAGAACCTGTGAATCTGTGAAAGGAATCCTGACTTTTACTTCCTCCTTTTTGGTCTGACTTCCAGTATATGCTCAAATTCTTAGAGGCTGCATCCTAATATTTCACTTCCAGAACATTCTGTATCTATCCCTCCATAGTTATGTTTCTATCTTTGTTCTGCTTATCGATAAATTTGCAGGTGTGAAGTGGGTTATAAAGGCGGACAAATATAAGAAGATCAAATTTTGCTGCCTTCAGTCCAAAGCTGCTGAACCATACTTGAGACTGAGTGGTTTAGACAGAGAGGATGTTTACCGTCGCTTTGTGTTCATTGAGGGCCATGGTTCATACTACCAAGCTTCTACCGCTGCTCTGAAGGTATTGTCCTATTTGCCTCTCCCCTACTCAGCTTTGAGCGTATTCTTGATAATCCCGACTCCTCTTAGAGATGCTGTCTATGACATTGTTGCCAAACATCGCTACGACTTGTTTGGAAAAGCCAAAGACTGCTTGGTTTTGCAAGAGGAAGAGCTTCTCGAGCGTTTCATTGATAGGGAGGAACTGCTCGATCAACGCCATCGGTAAGGAAGTATGTGCATTATTACATTTTTTTGGACATGGAAATTGTAAATTTTAGTCATTACCCTCCTTTTGGACTAAAGAACCTGATATGAATGTACTTCAGAACTAACTGTTTAGGTAAAAAAAAAACTTCACCTGTAAGTACTAGTTTGATGGCGAGTATTGTAATGATCAGTTTTAGACAAGAAGCATCAACATCCACAATTCACTTAAAGTAACAGCACTCATCTTACCGTACAGCTAAAACAATTTAGATTGTTCATAAAGACATCAAATGTTTTATATCTCTAAGATTGCTCAAGCCATATAGAAATACACTGATGCAAATTTTGTCCAGCATGACAGCTAAAAGATTCTGTTTGCTTTATCTAAGTTCTATCCTCGTCATTCTTGAGATCTCTGATAGTTCATACAAAAACAAATTCAGCTCATATATCAACAATCCCTTTGATAAAGATCCAGAAGAAAGCAACCAGCTGAACTCGATAATCAGGTGCCATCGTCACCAGTCCACAGGTTCCAGTCTTTATCAACATGCTCTTGAGCCCATTTGACTGCAGCACGGGC

Coding sequence (CDS)

ATGGGCCTCAGGCTGCTTGCGACTGAAGGAAGAGAAGGCAGTTCGGAATCGAAACCTCTCGTTCCATTTCCGAAATGTTCAGAAACAGAGAAAACCGCTGGTGATGATCGATCCAAAATGACGACCAAACTTCTTGCGAATCGGTTTCGGCACCTATTCTTCACATCAACAGGGACAACCAGAGCCACCTCCTTTACTATTACATCTTCTTCTTCCCCATTTCGATGCATATCTTTTTCTAAATTTTCATCACCGTCAACGTATTCTTCCGGCATCGATTGCTCTACTGCTGCGCCTCCGGATATTGCCGATGTTCCTGAAGAAGTTGTTGAGGAATTATTCGATGCCGTCTCTCCTGCTGCTGCGAAATCTTCGGCTGTCGAGCTTGTGTTTCCTTCTCTTCTCCAGCCTCGCGTTGTTGTCTATGACGGTGTCTGCCATCTCTGCCACCGCGGTTCGATCTCTTTTCTCTCCCTCTTTAAAACGCTCCGTATACAGTTTCATTCTGGTTCCTCTGTTTCACGAGAATGTGCCATTGCTACCCCTCGGCGTTTTGAATTTCCTTACCTTGTCTTTAACTCTATGAACTGTTCGACATTGGTACCGCCCAACTTTTGGAGGAGTTTGATGGCTCTTAGAACCTGTGAATCTGTGAAAGGAATCCTGACTTTTACTTCCTCCTTTTTGGTCTGA
BLAST of CmoCh04G016660 vs. TrEMBL
Match: A0A0A0KVQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603330 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.8e-30
Identity = 81/129 (62.79%), Postives = 95/129 (73.64%), Query Frame = 1

Query: 40  MTTKLLANRFRHLFFTSTGTTRATSFTITSSSSPFRCISFSKFSSPSTYSSGIDCSTAAP 99
           M +KLL+NRFR L  TST T R TSFT + S S FR +  SKFSSP + S GIDCSTAAP
Sbjct: 1   MASKLLSNRFRQLVLTSTATIRPTSFTTSFSFSSFRRVFSSKFSSPLSSSFGIDCSTAAP 60

Query: 100 PDIADVPEEVVEELFDAVSPAAAKSS-AVELVFPSLLQPRVVVYDGVCHLCHRGSISFLS 159
            DIADVPEEVV++  D VSPA A +S A E VFP+LLQPRVV+YDGVCHLCHRG    + 
Sbjct: 61  ADIADVPEEVVKDYVDVVSPAVAVNSLAAEPVFPTLLQPRVVIYDGVCHLCHRGVKWVIK 120

Query: 160 LFKTLRIQF 168
           + K  +I+F
Sbjct: 121 VDKYKKIKF 129

BLAST of CmoCh04G016660 vs. TrEMBL
Match: A0A067JEX1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21774 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.9e-07
Identity = 50/117 (42.74%), Postives = 64/117 (54.70%), Query Frame = 1

Query: 53  FFTSTGTTRATSFTITSSSSPFRCI-SFSKFSSPSTYSSGIDCSTAAPPDIADVPEEVVE 112
           ++T+T T R   F  +SSS    C+   S FSS S+ S      T    D A    +VV 
Sbjct: 8   YWTATSTPRNAQFFSSSSSFSSSCLLKCSLFSSFSSSSFPFPSPTDIVSDTAAAVADVVP 67

Query: 113 ELFDAVSPAAAKSSAVELVF-PSLLQPRVVVYDGVCHLCHRGSISFLSLFKTLRIQF 168
           E  D + P  + SS V+ V  P+LLQPRVVVYDGVCHLCHRG    +   K  +I+F
Sbjct: 68  EAEDLLYPDVSISSTVKPVTAPTLLQPRVVVYDGVCHLCHRGVKWVIKADKYRKIKF 124

BLAST of CmoCh04G016660 vs. TAIR10
Match: AT1G24095.1 (AT1G24095.1 Putative thiol-disulphide oxidoreductase DCC)

HSP 1 Score: 48.9 bits (115), Expect = 4.8e-06
Identity = 33/87 (37.93%), Postives = 47/87 (54.02%), Query Frame = 1

Query: 82  FSSPS-TYSSGIDCSTAAPPDIADVPEEVVEELFDAVSPAAAKSSAVELVFPSLLQPRVV 141
           FS+PS  +S+G    T A  D         +E+   + PA + +  + ++ P  LQPRVV
Sbjct: 26  FSAPSPAFSTGAISRTTAEID--------ADEVTACLDPAESVTK-IPVIMPGNLQPRVV 85

Query: 142 VYDGVCHLCHRGSISFLSLFKTLRIQF 168
           VYDGVCHLCH G    +   K  +I+F
Sbjct: 86  VYDGVCHLCHGGVKWIIKADKYRKIKF 103

BLAST of CmoCh04G016660 vs. NCBI nr
Match: gi|659090878|ref|XP_008446251.1| (PREDICTED: uncharacterized protein LOC103489038 [Cucumis melo])

HSP 1 Score: 147.1 bits (370), Expect = 3.7e-32
Identity = 84/129 (65.12%), Postives = 95/129 (73.64%), Query Frame = 1

Query: 40  MTTKLLANRFRHLFFTSTGTTRATSFTITSSSSPFRCISFSKFSSPSTYSSGIDCSTAAP 99
           M TKLL N FRHL FTST T R TSFT +SS S FR +  SKFSSP   SSGIDCSTAAP
Sbjct: 1   MATKLLTNGFRHLVFTSTATIRPTSFTTSSSLSSFRRVFLSKFSSPLPSSSGIDCSTAAP 60

Query: 100 PDIADVPEEVVEELFDAVSPA-AAKSSAVELVFPSLLQPRVVVYDGVCHLCHRGSISFLS 159
            +I DVPEEVV +  DAVSPA A  SSA + VFP+LLQPRVV+YDGVCHLCHRG    + 
Sbjct: 61  ANIGDVPEEVVGDYVDAVSPAVAVNSSAAQPVFPTLLQPRVVIYDGVCHLCHRGVKWVIK 120

Query: 160 LFKTLRIQF 168
           + K  +I+F
Sbjct: 121 VDKYKKIKF 129

BLAST of CmoCh04G016660 vs. NCBI nr
Match: gi|449434879|ref|XP_004135223.1| (PREDICTED: uncharacterized protein LOC101209995 [Cucumis sativus])

HSP 1 Score: 141.0 bits (354), Expect = 2.7e-30
Identity = 81/129 (62.79%), Postives = 95/129 (73.64%), Query Frame = 1

Query: 40  MTTKLLANRFRHLFFTSTGTTRATSFTITSSSSPFRCISFSKFSSPSTYSSGIDCSTAAP 99
           M +KLL+NRFR L  TST T R TSFT + S S FR +  SKFSSP + S GIDCSTAAP
Sbjct: 1   MASKLLSNRFRQLVLTSTATIRPTSFTTSFSFSSFRRVFSSKFSSPLSSSFGIDCSTAAP 60

Query: 100 PDIADVPEEVVEELFDAVSPAAAKSS-AVELVFPSLLQPRVVVYDGVCHLCHRGSISFLS 159
            DIADVPEEVV++  D VSPA A +S A E VFP+LLQPRVV+YDGVCHLCHRG    + 
Sbjct: 61  ADIADVPEEVVKDYVDVVSPAVAVNSLAAEPVFPTLLQPRVVIYDGVCHLCHRGVKWVIK 120

Query: 160 LFKTLRIQF 168
           + K  +I+F
Sbjct: 121 VDKYKKIKF 129

BLAST of CmoCh04G016660 vs. NCBI nr
Match: gi|802787902|ref|XP_012092041.1| (PREDICTED: uncharacterized protein LOC105649843 [Jatropha curcas])

HSP 1 Score: 63.9 bits (154), Expect = 4.1e-07
Identity = 50/117 (42.74%), Postives = 64/117 (54.70%), Query Frame = 1

Query: 53  FFTSTGTTRATSFTITSSSSPFRCI-SFSKFSSPSTYSSGIDCSTAAPPDIADVPEEVVE 112
           ++T+T T R   F  +SSS    C+   S FSS S+ S      T    D A    +VV 
Sbjct: 8   YWTATSTPRNAQFFSSSSSFSSSCLLKCSLFSSFSSSSFPFPSPTDIVSDTAAAVADVVP 67

Query: 113 ELFDAVSPAAAKSSAVELVF-PSLLQPRVVVYDGVCHLCHRGSISFLSLFKTLRIQF 168
           E  D + P  + SS V+ V  P+LLQPRVVVYDGVCHLCHRG    +   K  +I+F
Sbjct: 68  EAEDLLYPDVSISSTVKPVTAPTLLQPRVVVYDGVCHLCHRGVKWVIKADKYRKIKF 124

BLAST of CmoCh04G016660 vs. NCBI nr
Match: gi|645281082|ref|XP_008245467.1| (PREDICTED: DCC family protein At1g52590, chloroplastic [Prunus mume])

HSP 1 Score: 63.2 bits (152), Expect = 7.0e-07
Identity = 45/102 (44.12%), Postives = 61/102 (59.80%), Query Frame = 1

Query: 66  TITSSSSPFRCISFSKFSSPSTYSSGIDCSTAAPPDIADVPEEVVEELFDAVSPAAAKSS 125
           +++SSS P +C   S  SS S  SS +  STAA  D  D+ +E   ++    +P A   S
Sbjct: 18  SLSSSSFPLKCSFSSTSSSSSLSSSDVVSSTAA--DAVDLGDEEDNDVPIYSNPTAP--S 77

Query: 126 AVELVFPSLLQPRVVVYDGVCHLCHRGSISFLSLFKTLRIQF 168
           AV+ + P+LLQPRVVVYDGVCHLCH G    +   K  +I+F
Sbjct: 78  AVKPMIPTLLQPRVVVYDGVCHLCHGGVKWVIKADKYRKIKF 115

BLAST of CmoCh04G016660 vs. NCBI nr
Match: gi|1009125489|ref|XP_015879638.1| (PREDICTED: uncharacterized protein YuxK [Ziziphus jujuba])

HSP 1 Score: 60.8 bits (146), Expect = 3.5e-06
Identity = 36/86 (41.86%), Postives = 51/86 (59.30%), Query Frame = 1

Query: 82  FSSPSTYSSGIDCSTAAPPDIADVPEEVVEELFDAVSPAAAKSSAVELVFPSLLQPRVVV 141
           F+S +  ++    S  A  ++A V +E  +     V PAA+ SS  + V P++LQPRVVV
Sbjct: 26  FASSTATAASQSQSPTATAEVASVDDEEED-----VDPAASSSSLAKAVTPTILQPRVVV 85

Query: 142 YDGVCHLCHRGSISFLSLFKTLRIQF 168
           YDGVCHLCHRG    +   K  +I+F
Sbjct: 86  YDGVCHLCHRGVKWVIQADKHRKIKF 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KVQ2_CUCSA1.8e-3062.79Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603330 PE=4 SV=1[more]
A0A067JEX1_JATCU2.9e-0742.74Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21774 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G24095.14.8e-0637.93 Putative thiol-disulphide oxidoreductase DCC[more]
Match NameE-valueIdentityDescription
gi|659090878|ref|XP_008446251.1|3.7e-3265.12PREDICTED: uncharacterized protein LOC103489038 [Cucumis melo][more]
gi|449434879|ref|XP_004135223.1|2.7e-3062.79PREDICTED: uncharacterized protein LOC101209995 [Cucumis sativus][more]
gi|802787902|ref|XP_012092041.1|4.1e-0742.74PREDICTED: uncharacterized protein LOC105649843 [Jatropha curcas][more]
gi|645281082|ref|XP_008245467.1|7.0e-0744.12PREDICTED: DCC family protein At1g52590, chloroplastic [Prunus mume][more]
gi|1009125489|ref|XP_015879638.1|3.5e-0641.86PREDICTED: uncharacterized protein YuxK [Ziziphus jujuba][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G016660.1CmoCh04G016660.1mRNA


The following gene(s) are paralogous to this gene:

None