Cp4.1LG01g12760 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g12760
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionThioredoxin h
LocationCp4.1LG01 : 8598103 .. 8599116 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTATATAAAATTTTAAAAGCATTCACATAGATTGGAGGCGACGGAATCATATTTTTTCTTCTCATTATATAAAGCTGATCATCAGCCATGTCTTCAAACAAGATTTCTATCTTAGAAGAGGCTCAAACAAAGATCTGAGTTCAAAACTTGAAGCTTCAGTTTCAAAAAAAATGGGAGCAAGCTTTACAATCCCACGTTCAAGATCTTCCAATGCAACATTACAAGCCATGGCTCCCACCATTGTGGAGTGCCACAACAAAGCAGAGTGGACAGCTCGTTTGGAAGCCACAAGGGAAACAAACAAGCTTGTAAGTTTAATACCAACTCTTTATCCCAACATATAGGGATGCAAACGCTTTGGGTTTGTGATTTCTTCTTGTGCTGCTGGTTTGGTATAGATGGTGATTGACTTCACTGCTGCATGGTGTGAACCTTGTCGACGAATGGAGCCGATCATCAAGGAGTTTGCTTCGAGGTTCAAGGATGTTGAGTTCGTCAAAATCGACGTCGATGAGTTGATGGTATGAGCTTTCAATCTTGTTTTGATTCAATCTTGTTTTGACTGTGTTGAAAAAATGGATGACAACAGGATGTTGCAAAGGAATATGGAGTGGACGCAATGCCAACATTCATACTGATTAAGAAGGGGAAGGTAGTTGATAAGGTGGTCGGCGCCAGGAAGGATGACCTGCAGAAGAAGATTGAGAATCATAGTAAATATTGATGGATGCTCCTCTTGAAGCTTCTCAATAAGCCAGGAAGAACTAGTACTATAGAACAAACTAAAATGGTGTTTATTTTATTATTCCAGCCCTTCTCACTTCTGATATAAAAAGAAAAAAAAGTATACTTCCTTCTGCTATTTGTCCAATCTCTCTGTCTTTCTCTTCCTCTGCCCAAATTACGCACAAGTATTGTAATGTTTCAAGTCTACTACTAGGAGATATTGTCCTCTTTGGACAAACGTGTCAGCTAGGGAGACGTAAGCTCACCTCTAGTAGATATTGTCCTC

mRNA sequence

ATTTATATAAAATTTTAAAAGCATTCACATAGATTGGAGGCGACGGAATCATATTTTTTCTTCTCATTATATAAAGCTGATCATCAGCCATGTCTTCAAACAAGATTTCTATCTTAGAAGAGGCTCAAACAAAGATCTGAGTTCAAAACTTGAAGCTTCAGTTTCAAAAAAAATGGGAGCAAGCTTTACAATCCCACGTTCAAGATCTTCCAATGCAACATTACAAGCCATGGCTCCCACCATTGTGGAGTGCCACAACAAAGCAGAGTGGACAGCTCGTTTGGAAGCCACAAGGGAAACAAACAAGCTTATGGTGATTGACTTCACTGCTGCATGGTGTGAACCTTGTCGACGAATGGAGCCGATCATCAAGGAGTTTGCTTCGAGGTTCAAGGATGTTGAGTTCGTCAAAATCGACGTCGATGAGTTGATGGATGTTGCAAAGGAATATGGAGTGGACGCAATGCCAACATTCATACTGATTAAGAAGGGGAAGGTAGTTGATAAGGTGGTCGGCGCCAGGAAGGATGACCTGCAGAAGAAGATTGAGAATCATAGTAAATATTGATGGATGCTCCTCTTGAAGCTTCTCAATAAGCCAGGAAGAACTAGTACTATAGAACAAACTAAAATGGTGTTTATTTTATTATTCCAGCCCTTCTCACTTCTGATATAAAAAGAAAAAAAAGTATACTTCCTTCTGCTATTTGTCCAATCTCTCTGTCTTTCTCTTCCTCTGCCCAAATTACGCACAAGTATTGTAATGTTTCAAGTCTACTACTAGGAGATATTGTCCTCTTTGGACAAACGTGTCAGCTAGGGAGACGTAAGCTCACCTCTAGTAGATATTGTCCTC

Coding sequence (CDS)

ATGGGAGCAAGCTTTACAATCCCACGTTCAAGATCTTCCAATGCAACATTACAAGCCATGGCTCCCACCATTGTGGAGTGCCACAACAAAGCAGAGTGGACAGCTCGTTTGGAAGCCACAAGGGAAACAAACAAGCTTATGGTGATTGACTTCACTGCTGCATGGTGTGAACCTTGTCGACGAATGGAGCCGATCATCAAGGAGTTTGCTTCGAGGTTCAAGGATGTTGAGTTCGTCAAAATCGACGTCGATGAGTTGATGGATGTTGCAAAGGAATATGGAGTGGACGCAATGCCAACATTCATACTGATTAAGAAGGGGAAGGTAGTTGATAAGGTGGTCGGCGCCAGGAAGGATGACCTGCAGAAGAAGATTGAGAATCATAGTAAATATTGA

Protein sequence

MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENHSKY
Homology
[Close]
BLAST of Cp4.1LG01g12760 vs. Swiss-Prot
Match: TRXH4_ARATH (Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-29
Identity = 59/107 (55.14%), Postives = 78/107 (72.90%), Query Frame = 1 

Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRF-KDVEFVKID 83
           ++ CH    WT +L+  +E+NKL+VIDFTA+WC PCR + PI  + A +F     F K+D
Sbjct: 8   VIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVD 67

Query: 84  VDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENHS 130
           VDEL  VAKE+GV+AMPTF+ IK G+VVDK+VGA K+DLQ KI  H+
Sbjct: 68  VDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]
BLAST of Cp4.1LG01g12760 vs. Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 1.8e-28
Identity = 52/102 (50.98%), Postives = 79/102 (77.45%), Query Frame = 1 

Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVKIDV 83
           +++  + A W       +E+NKL+V+DF+A+WC PCR +EP I   A +F DV+FVK+DV
Sbjct: 27  VLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDV 86

Query: 84  DELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKI 126
           DEL DVAKE+ V AMPTF+L+K+GK +++++GA+KD+L+KK+
Sbjct: 87  DELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKV 128

[Close]
BLAST of Cp4.1LG01g12760 vs. Swiss-Prot
Match: TRXH1_ORYSJ (Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.1e-28
Identity = 55/105 (52.38%), Postives = 76/105 (72.38%), Query Frame = 1 

Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVKIDV 83
           ++ CHNK E+ A++   +E  K+++IDFTA+WC PCR + P+  E+A +F    F+K+DV
Sbjct: 8   VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDV 67

Query: 84  DELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENH 129
           DEL +VA++Y V+AMPTF+ IK G   DKVVGARKDDLQ  I  H
Sbjct: 68  DELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112

[Close]
BLAST of Cp4.1LG01g12760 vs. Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.1e-28
Identity = 55/105 (52.38%), Postives = 76/105 (72.38%), Query Frame = 1 

Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVKIDV 83
           ++ CHNK E+ A++   +E  K+++IDFTA+WC PCR + P+  E+A +F    F+K+DV
Sbjct: 8   VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDV 67

Query: 84  DELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENH 129
           DEL +VA++Y V+AMPTF+ IK G   DKVVGARKDDLQ  I  H
Sbjct: 68  DELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112

[Close]
BLAST of Cp4.1LG01g12760 vs. Swiss-Prot
Match: TRXH2_BRANA (Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 9.2e-28
Identity = 56/107 (52.34%), Postives = 77/107 (71.96%), Query Frame = 1 

Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRF-KDVEFVKID 83
           ++ CH    W  +L+  +++NKL+VIDFTA+WC PCR + P+  + A +F     F K+D
Sbjct: 8   VIGCHEIDVWAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAIFFKVD 67

Query: 84  VDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENHS 130
           VDEL +VA+E+GV+AMPTF+LIK G VVDKVVGARK+DL   I  H+
Sbjct: 68  VDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKHT 114

[Close]
BLAST of Cp4.1LG01g12760 vs. TrEMBL
Match: A0A0A0KQG0_CUCSA (Thioredoxin h OS=Cucumis sativus GN=Csa_5G604150 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 6.6e-57
Identity = 109/131 (83.21%), Postives = 120/131 (91.60%), Query Frame = 1 

Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MGASFT+PRS+SSNA +Q   PTI+ECH+KA+WTAR EAT+ETNKLMVIDFTAAWC PCR
Sbjct: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
            MEP IKE A+RFKDVEFVKIDVDELMDVAKEYGV+AMPTFILIK GKV+DKVVGAR+DD
Sbjct: 61  HMEPTIKELAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120

Query: 121 LQKKIENHSKY 132
           LQKKIE HSKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]
BLAST of Cp4.1LG01g12760 vs. TrEMBL
Match: A0A068VME5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012890001 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.6e-34
Identity = 72/128 (56.25%), Postives = 99/128 (77.34%), Query Frame = 1 

Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MGA+ +  +  + ++++      +V  H+ A+W    EA++ETNKL+VIDFTA+WC PC+
Sbjct: 1   MGANVSAWQEANIDSSMALKKSPVVAFHSSAKWKIHFEASKETNKLIVIDFTASWCGPCQ 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
            +EP I E A+++ DVEFVKIDVDEL DVA+EYGV AMPTFIL+KKGK +DK+VGA+K++
Sbjct: 61  YIEPSINELAAKYTDVEFVKIDVDELDDVAEEYGVQAMPTFILLKKGKAIDKIVGAKKEE 120

Query: 121 LQKKIENH 129
           LQKKIE H
Sbjct: 121 LQKKIEKH 128

[Close]
BLAST of Cp4.1LG01g12760 vs. TrEMBL
Match: M5Y5Y2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013299mg PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.7e-34
Identity = 71/130 (54.62%), Postives = 96/130 (73.85%), Query Frame = 1 

Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MG + +  +  S + + +     I+  H+K +W     A++E+NKLMVIDFTA WC PCR
Sbjct: 1   MGGNLSHIQDYSDDDSSRGKKSRIMAFHSKDQWNTHFNASKESNKLMVIDFTATWCGPCR 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
            MEP +KE+A ++ DVEF+K+DVDEL DVA+E+GV AMP+F+ +KKG VVDKVVGARK++
Sbjct: 61  AMEPTLKEYADKYTDVEFIKLDVDELPDVAREFGVQAMPSFVFVKKGDVVDKVVGARKEE 120

Query: 121 LQKKIENHSK 131
           LQKKIE H K
Sbjct: 121 LQKKIEKHRK 130

[Close]
BLAST of Cp4.1LG01g12760 vs. TrEMBL
Match: K4BWK9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-33
Identity = 72/130 (55.38%), Postives = 96/130 (73.85%), Query Frame = 1 

Query: 1   MGASFTIPRSRSSNA--TLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEP 60
           MGA+++     + N   T Q+    ++  H+  +W    ++ + TNKL+VIDFTA WC P
Sbjct: 1   MGANYSSTWHETHNMPITPQSKRSQVIAFHSSTKWKLHFDSLKNTNKLIVIDFTATWCGP 60

Query: 61  CRRMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARK 120
           C+ MEP++ +FA+++ DVEFVKIDVDEL DVA+EYGV AMPTF+LIKKGKVVDK+VGA K
Sbjct: 61  CKYMEPVLNDFAAKYTDVEFVKIDVDELDDVAQEYGVQAMPTFVLIKKGKVVDKIVGADK 120

Query: 121 DDLQKKIENH 129
           D LQKKI+ H
Sbjct: 121 DGLQKKIQKH 130

[Close]
BLAST of Cp4.1LG01g12760 vs. TrEMBL
Match: M1BHP2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017632 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.7e-33
Identity = 73/130 (56.15%), Postives = 95/130 (73.08%), Query Frame = 1 

Query: 1   MGASFTIPRSRSSNA--TLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEP 60
           MGA+++     + N   T Q     ++  H+  +W    ++ + TNKL+VIDFTA WC P
Sbjct: 1   MGANYSSTWHETHNMPITPQIKRSQVIAFHSSTKWKLHFDSLKNTNKLIVIDFTATWCGP 60

Query: 61  CRRMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARK 120
           C+ MEP++ +FA+++ DVEFVKIDVDEL DVA+EYGV AMPTFILIKKGKVVDK+VGA K
Sbjct: 61  CKYMEPVLNDFAAKYTDVEFVKIDVDELDDVAQEYGVQAMPTFILIKKGKVVDKIVGADK 120

Query: 121 DDLQKKIENH 129
           D LQKKI+ H
Sbjct: 121 DGLQKKIQKH 130

[Close]
BLAST of Cp4.1LG01g12760 vs. TAIR10
Match: AT1G19730.1 (AT1G19730.1 Thioredoxin superfamily protein)

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-30
Identity = 59/107 (55.14%), Postives = 78/107 (72.90%), Query Frame = 1 

Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRF-KDVEFVKID 83
           ++ CH    WT +L+  +E+NKL+VIDFTA+WC PCR + PI  + A +F     F K+D
Sbjct: 8   VIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVD 67

Query: 84  VDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENHS 130
           VDEL  VAKE+GV+AMPTF+ IK G+VVDK+VGA K+DLQ KI  H+
Sbjct: 68  VDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]
BLAST of Cp4.1LG01g12760 vs. TAIR10
Match: AT5G39950.1 (AT5G39950.1 thioredoxin 2)

HSP 1 Score: 126.7 bits (317), Expect = 1.0e-29
Identity = 52/102 (50.98%), Postives = 79/102 (77.45%), Query Frame = 1 

Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVKIDV 83
           +++  + A W       +E+NKL+V+DF+A+WC PCR +EP I   A +F DV+FVK+DV
Sbjct: 27  VLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDV 86

Query: 84  DELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKI 126
           DEL DVAKE+ V AMPTF+L+K+GK +++++GA+KD+L+KK+
Sbjct: 87  DELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKV 128

[Close]
BLAST of Cp4.1LG01g12760 vs. TAIR10
Match: AT1G45145.1 (AT1G45145.1 thioredoxin H-type 5)

HSP 1 Score: 119.0 bits (297), Expect = 2.2e-27
Identity = 50/105 (47.62%), Postives = 75/105 (71.43%), Query Frame = 1 

Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVKIDV 83
           ++ CH    W  +++   E+ KL+VIDFTA+WC PCR + P+  E A +F +V F KIDV
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 84  DELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENH 129
           DEL  VA+E+ V+AMPTF+ +K+G ++D+VVGA KD++ +K+  H
Sbjct: 67  DELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]
BLAST of Cp4.1LG01g12760 vs. TAIR10
Match: AT1G69880.1 (AT1G69880.1 thioredoxin H-type 8)

HSP 1 Score: 118.6 bits (296), Expect = 2.8e-27
Identity = 51/110 (46.36%), Postives = 80/110 (72.73%), Query Frame = 1 

Query: 21  APTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVK 80
           +P IVE  N  +W +RL A ++TNKL+VI+FTA WC PC+ +EP ++E A+++ DVEFVK
Sbjct: 36  SPCIVEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVEFVK 95

Query: 81  IDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENHSK 131
           IDVD LM V  E+ +  +P  + +K+G+ VD VVG + D+L++K+  +++
Sbjct: 96  IDVDVLMSVWMEFNLSTLPAIVFMKRGREVDMVVGVKVDELERKLNKYTQ 145

[Close]
BLAST of Cp4.1LG01g12760 vs. TAIR10
Match: AT1G59730.1 (AT1G59730.1 thioredoxin H-type 7)

HSP 1 Score: 116.3 bits (290), Expect = 1.4e-26
Identity = 48/105 (45.71%), Postives = 75/105 (71.43%), Query Frame = 1 

Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVKIDV 83
           +VE  ++ +W +  ++ + +NKL+VIDFTA WC PC+ MEP ++E AS++ +  F ++DV
Sbjct: 23  VVEIESRRQWKSLFDSMKGSNKLLVIDFTAVWCGPCKAMEPRVREIASKYSEAVFARVDV 82

Query: 84  DELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENH 129
           D LMDVA  Y    +P F+ +K+G+ +D+VVGA+ D+L KKIE H
Sbjct: 83  DRLMDVAGTYRAITLPAFVFVKRGEEIDRVVGAKPDELVKKIEQH 127

[Close]
BLAST of Cp4.1LG01g12760 vs. NCBI nr
Match: gi|449434841|ref|XP_004135204.1| (PREDICTED: thioredoxin H-type [Cucumis sativus])

HSP 1 Score: 228.0 bits (580), Expect = 9.4e-57
Identity = 109/131 (83.21%), Postives = 120/131 (91.60%), Query Frame = 1 

Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MGASFT+PRS+SSNA +Q   PTI+ECH+KA+WTAR EAT+ETNKLMVIDFTAAWC PCR
Sbjct: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
            MEP IKE A+RFKDVEFVKIDVDELMDVAKEYGV+AMPTFILIK GKV+DKVVGAR+DD
Sbjct: 61  HMEPTIKELAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120

Query: 121 LQKKIENHSKY 132
           LQKKIE HSKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]
BLAST of Cp4.1LG01g12760 vs. NCBI nr
Match: gi|659090963|ref|XP_008446296.1| (PREDICTED: thioredoxin H-type-like [Cucumis melo])

HSP 1 Score: 219.2 bits (557), Expect = 4.4e-54
Identity = 104/131 (79.39%), Postives = 118/131 (90.08%), Query Frame = 1 

Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MGASFT+P S+SSNA +Q   PTI+ECH+KA+WTAR EAT+ETNKLMVIDF AAWC PCR
Sbjct: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
            MEPIIKEFA+RFKDVEFVKIDVDELMD+A EYGV+AMPTFILIK GKV+DKVVG R+++
Sbjct: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120

Query: 121 LQKKIENHSKY 132
           LQKKIE HSKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]
BLAST of Cp4.1LG01g12760 vs. NCBI nr
Match: gi|661866679|emb|CDP21876.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-34
Identity = 72/128 (56.25%), Postives = 99/128 (77.34%), Query Frame = 1 

Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MGA+ +  +  + ++++      +V  H+ A+W    EA++ETNKL+VIDFTA+WC PC+
Sbjct: 1   MGANVSAWQEANIDSSMALKKSPVVAFHSSAKWKIHFEASKETNKLIVIDFTASWCGPCQ 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
            +EP I E A+++ DVEFVKIDVDEL DVA+EYGV AMPTFIL+KKGK +DK+VGA+K++
Sbjct: 61  YIEPSINELAAKYTDVEFVKIDVDELDDVAEEYGVQAMPTFILLKKGKAIDKIVGAKKEE 120

Query: 121 LQKKIENH 129
           LQKKIE H
Sbjct: 121 LQKKIEKH 128

[Close]
BLAST of Cp4.1LG01g12760 vs. NCBI nr
Match: gi|645229951|ref|XP_008221701.1| (PREDICTED: thioredoxin H2-like [Prunus mume])

HSP 1 Score: 153.3 bits (386), Expect = 2.9e-34
Identity = 71/130 (54.62%), Postives = 97/130 (74.62%), Query Frame = 1 

Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MG + +  +  S + + +     I+  H+K +W+    A++E+NKLMVIDFTA WC PCR
Sbjct: 1   MGGNLSHIQDYSDDDSSRGKKSRIMAFHSKDQWSTHFNASKESNKLMVIDFTATWCGPCR 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
            MEP +KE+A ++ DVEF+K+DVDEL DVA+E+GV AMP+F+ +KKG VVDKVVGARK++
Sbjct: 61  AMEPTLKEYADKYTDVEFIKLDVDELPDVAREFGVQAMPSFVFVKKGDVVDKVVGARKEE 120

Query: 121 LQKKIENHSK 131
           LQKKIE H K
Sbjct: 121 LQKKIEKHRK 130

[Close]
BLAST of Cp4.1LG01g12760 vs. NCBI nr
Match: gi|596290038|ref|XP_007226116.1| (hypothetical protein PRUPE_ppa013299mg [Prunus persica])

HSP 1 Score: 152.9 bits (385), Expect = 3.8e-34
Identity = 71/130 (54.62%), Postives = 96/130 (73.85%), Query Frame = 1 

Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MG + +  +  S + + +     I+  H+K +W     A++E+NKLMVIDFTA WC PCR
Sbjct: 1   MGGNLSHIQDYSDDDSSRGKKSRIMAFHSKDQWNTHFNASKESNKLMVIDFTATWCGPCR 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
            MEP +KE+A ++ DVEF+K+DVDEL DVA+E+GV AMP+F+ +KKG VVDKVVGARK++
Sbjct: 61  AMEPTLKEYADKYTDVEFIKLDVDELPDVAREFGVQAMPSFVFVKKGDVVDKVVGARKEE 120

Query: 121 LQKKIENHSK 131
           LQKKIE H K
Sbjct: 121 LQKKIEKHRK 130

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g12760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRXH4_ARATH2.2e-2955.14Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2[more]
TRXH2_ARATH1.8e-2850.98Thioredoxin H2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2[more]
TRXH1_ORYSJ4.1e-2852.38Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1[more]
TRXH_ORYSI4.1e-2852.38Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1[more]
TRXH2_BRANA9.2e-2852.34Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1[more]
BLAST of Cp4.1LG01g12760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQG0_CUCSA6.6e-5783.21Thioredoxin h OS=Cucumis sativus GN=Csa_5G604150 PE=4 SV=1[more]
A0A068VME5_COFCA1.6e-3456.25Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012890001 PE=4 SV=1[more]
M5Y5Y2_PRUPE2.7e-3454.62Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013299mg PE=4 SV=1[more]
K4BWK9_SOLLC1.3e-3355.38Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
M1BHP2_SOLTU1.7e-3356.15Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017632 PE=4 SV=1[more]
BLAST of Cp4.1LG01g12760 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G19730.11.2e-3055.14 Thioredoxin superfamily protein[more]
AT5G39950.11.0e-2950.98 thioredoxin 2[more]
AT1G45145.12.2e-2747.62 thioredoxin H-type 5[more]
AT1G69880.12.8e-2746.36 thioredoxin H-type 8[more]
AT1G59730.11.4e-2645.71 thioredoxin H-type 7[more]
BLAST of Cp4.1LG01g12760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449434841|ref|XP_004135204.1|9.4e-5783.21PREDICTED: thioredoxin H-type [Cucumis sativus][more]
gi|659090963|ref|XP_008446296.1|4.4e-5479.39PREDICTED: thioredoxin H-type-like [Cucumis melo][more]
gi|661866679|emb|CDP21876.1|2.3e-3456.25unnamed protein product [Coffea canephora][more]
gi|645229951|ref|XP_008221701.1|2.9e-3454.62PREDICTED: thioredoxin H2-like [Prunus mume][more]
gi|596290038|ref|XP_007226116.1|3.8e-3454.62hypothetical protein PRUPE_ppa013299mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO:0006662glycerol ether metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR017937Thioredoxin_CS
IPR013766Thioredoxin_domain
IPR012336Thioredoxin-like_fold
IPR005746Thioredoxin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005623 cell
cellular_component GO:0005575 cellular_component
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g12760.1Cp4.1LG01g12760.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 9..130
score: 7.4
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 13..128
score: 8.8
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 19..129
score: 3.46
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 25..128
score: 1.1
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 6..130
score: 14
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 48..66
scor
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 94..105
score: 1.7E-5coord: 47..55
score: 1.7E-5coord: 55..64
score: 1.
NoneNo IPR availablePANTHERPTHR10438:SF278THIOREDOXIN H7-RELATEDcoord: 9..130
score: 7.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g12760Cucsa.285490Cucumber (Gy14) v1cgycpeB0754
Cp4.1LG01g12760CmaCh18G011880Cucurbita maxima (Rimu)cmacpeB432
Cp4.1LG01g12760CmaCh04G016220Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g12760CmoCh04G017000Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g12760CmoCh18G012090Cucurbita moschata (Rifu)cmocpeB395
Cp4.1LG01g12760Cla010144Watermelon (97103) v1cpewmB432
Cp4.1LG01g12760Csa5G604150Cucumber (Chinese Long) v2cpecuB416
Cp4.1LG01g12760MELO3C012053Melon (DHL92) v3.5.1cpemeB377
Cp4.1LG01g12760ClCG05G024700Watermelon (Charleston Gray)cpewcgB393
Cp4.1LG01g12760CSPI05G23290Wild cucumber (PI 183967)cpecpiB415
Cp4.1LG01g12760Lsi04G004810Bottle gourd (USVL1VR-Ls)cpelsiB360
Cp4.1LG01g12760MELO3C012053.2Melon (DHL92) v3.6.1cpemedB437
Cp4.1LG01g12760CsaV3_5G032200Cucumber (Chinese Long) v3cpecucB0518
Cp4.1LG01g12760Bhi07G001325Wax gourdcpewgoB0568
Cp4.1LG01g12760CsGy5G022790Cucumber (Gy14) v2cgybcpeB626
Cp4.1LG01g12760Carg01736Silver-seed gourdcarcpeB1177
Cp4.1LG01g12760Carg17235Silver-seed gourdcarcpeB0148
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g12760Cp4.1LG09g01410Cucurbita pepo (Zucchini)cpecpeB034
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g12760Cucurbita pepo (Zucchini)cpecpeB203
Cp4.1LG01g12760Cucurbita pepo (Zucchini)cpecpeB346
Cp4.1LG01g12760Watermelon (97103) v1cpewmB444
Cp4.1LG01g12760Cucumber (Gy14) v2cgybcpeB061
Cp4.1LG01g12760Cucumber (Gy14) v2cgybcpeB645
Cp4.1LG01g12760Melon (DHL92) v3.6.1cpemedB421
Cp4.1LG01g12760Melon (DHL92) v3.6.1cpemedB459
Cp4.1LG01g12760Cucumber (Chinese Long) v3cpecucB0470
Cp4.1LG01g12760Cucumber (Chinese Long) v3cpecucB0537
Cp4.1LG01g12760Wax gourdcpewgoB0507
Cp4.1LG01g12760Wax gourdcpewgoB0551