CmoCh18G012090 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G012090
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Thioredoxin h
Location	Cmo_Chr18 : 12046951 .. 12047834 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCAGAGAAGAGGCTCAAACTGACCTGAGTTTAAGAACTTCCAGCTTCAATTTCAAAAAATGGGAGCAAGCTTTACAGCCCCACGTTCAAGATCTTCCAGTACATCATTAAAAGGAAAGGCTCCCACCATTGTCGAGTGCCACAACAAAGCTGAGTGGACAGCTCATTACGAAGCCACGAAGGAAACAAACAAGCTTGTAAATTTCATATGAACTTTCCATTCCAACATATAAATAATGCATGCTTCGGATTTGTCGTTGACAAGCAGCTGTTTTTTGCTTTGTGATTTGTTTGTGCTGCTGGTTTGTTGTAGATGGTGATTGATTTCACTGCTGCATGGTGTGCACCTTGTCGACACATGGAGCCGACTATCAAGGAGTTTGCTGCAAGGTTCAAGGATGTTGAGTTCATTAAAATCGACGTCGATAAGTTGACGGTATGGTCGAGCTTTCAATCTTGTCTTGTCTTTGTGTTTGATATTGGTTGAGTGGGTATGTTGAAACATGAATGTGCTGAAAAAATGGATGACAACGCAGGATGTCGCTAAGGAATATGGCGTAGAGGCAATGCCAACATTCATACTGCTTAAGAACGGGAAAGTAGTTGATAAAGTGGTCGGAGCCAGGAGGGAGGACCTGCAAAAGAAGATTGAGAAATATAGTAAATATTGATGATGTTCATGAAGCATCTAAATAAGGAAGGAAAAAACAGTAATAAAGAAGCAGGATTATCTAGTTTGCTAGAACAAACAAAGCATGTGATGTTTATTCTATTATGACAGCCCTTATGATTTATGTTCAGAAAGATTTCTTCCTTTTTCTTCTATAAACTCAAACAAATACATAAAAGAAATGACAGGTAGCTCAGCCAGCAGAGTGAAC

mRNA sequence

TCTCTCAGAGAAGAGGCTCAAACTGACCTGAGTTTAAGAACTTCCAGCTTCAATTTCAAAAAATGGGAGCAAGCTTTACAGCCCCACGTTCAAGATCTTCCAGTACATCATTAAAAGGAAAGGCTCCCACCATTGTCGAGTGCCACAACAAAGCTGAGTGGACAGCTCATTACGAAGCCACGAAGGAAACAAACAAGCTTATGGTGATTGATTTCACTGCTGCATGGTGTGCACCTTGTCGACACATGGAGCCGACTATCAAGGAGTTTGCTGCAAGGTTCAAGGATGTTGAGTTCATTAAAATCGACGTCGATAAGTTGACGGATGTCGCTAAGGAATATGGCGTAGAGGCAATGCCAACATTCATACTGCTTAAGAACGGGAAAGTAGTTGATAAAGTGGTCGGAGCCAGGAGGGAGGACCTGCAAAAGAAGATTGAGAAATATAGTAAATATTGATGATGTTCATGAAGCATCTAAATAAGGAAGGAAAAAACAGTAATAAAGAAGCAGGATTATCTAGTTTGCTAGAACAAACAAAGCATGTGATGTTTATTCTATTATGACAGCCCTTATGATTTATGTTCAGAAAGATTTCTTCCTTTTTCTTCTATAAACTCAAACAAATACATAAAAGAAATGACAGGTAGCTCAGCCAGCAGAGTGAAC

Coding sequence (CDS)

ATGGGAGCAAGCTTTACAGCCCCACGTTCAAGATCTTCCAGTACATCATTAAAAGGAAAGGCTCCCACCATTGTCGAGTGCCACAACAAAGCTGAGTGGACAGCTCATTACGAAGCCACGAAGGAAACAAACAAGCTTATGGTGATTGATTTCACTGCTGCATGGTGTGCACCTTGTCGACACATGGAGCCGACTATCAAGGAGTTTGCTGCAAGGTTCAAGGATGTTGAGTTCATTAAAATCGACGTCGATAAGTTGACGGATGTCGCTAAGGAATATGGCGTAGAGGCAATGCCAACATTCATACTGCTTAAGAACGGGAAAGTAGTTGATAAAGTGGTCGGAGCCAGGAGGGAGGACCTGCAAAAGAAGATTGAGAAATATAGTAAATATTGA

Homology

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BLAST of CmoCh18G012090 vs. Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 6.3e-29
Identity = 51/116 (43.97%), Postives = 86/116 (74.14%), Query Frame = 1


Query: 12  SSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAA 71
           +++   + +   +++  + A W  H+   KE+NKL+V+DF+A+WC PCR +EP I   A 
Sbjct: 15  ATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMAD 74

Query: 72  RFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEK 128
           +F DV+F+K+DVD+L DVAKE+ V AMPTF+L+K GK +++++GA++++L+KK+ K
Sbjct: 75  KFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130

[Close]

BLAST of CmoCh18G012090 vs. Swiss-Prot
Match: TRXH4_ARATH (Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 4.1e-28
Identity = 57/107 (53.27%), Postives = 76/107 (71.03%), Query Frame = 1


Query: 24  IVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAARF-KDVEFIKID 83
           ++ CH    WT   +  KE+NKL+VIDFTA+WC PCR + P   + A +F     F K+D
Sbjct: 8   VIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVD 67

Query: 84  VDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEKYS 130
           VD+L  VAKE+GVEAMPTF+ +K G+VVDK+VGA +EDLQ KI K++
Sbjct: 68  VDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]

BLAST of CmoCh18G012090 vs. Swiss-Prot
Match: TRH21_ORYSJ (Thioredoxin H2-1 OS=Oryza sativa subsp. japonica GN=Os07g0190800 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-27
Identity = 57/125 (45.60%), Postives = 89/125 (71.20%), Query Frame = 1


Query: 1   MGASFTAPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MG +F+  + + ++    G++  +V  H+KA+W   ++A K T KL+VIDF+A+WC PC+
Sbjct: 1   MGGAFSTSKPKPAAGEEGGES-AVVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCK 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
            MEP  KE A RF DV F+K+DVD+L +VA+ + VEAMPTF+L + G+ V ++VGA +++
Sbjct: 61  MMEPVFKEMAGRFTDVAFLKVDVDELAEVARTWRVEAMPTFVLARGGEEVGRIVGADKDE 120

Query: 121 LQKKI 126
           L+K I
Sbjct: 121 LEKTI 124

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BLAST of CmoCh18G012090 vs. Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-27
Identity = 53/105 (50.48%), Postives = 75/105 (71.43%), Query Frame = 1


Query: 24  IVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAARFKDVEFIKIDV 83
           ++ CHNK E+ A     KE  K+++IDFTA+WC PCR + P   E+A +F    F+K+DV
Sbjct: 8   VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDV 67

Query: 84  DKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEKY 129
           D+L +VA++Y VEAMPTF+ +K+G   DKVVGAR++DLQ  I K+
Sbjct: 68  DELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112

[Close]

BLAST of CmoCh18G012090 vs. Swiss-Prot
Match: TRXH1_ORYSJ (Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-27
Identity = 53/105 (50.48%), Postives = 75/105 (71.43%), Query Frame = 1


Query: 24  IVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAARFKDVEFIKIDV 83
           ++ CHNK E+ A     KE  K+++IDFTA+WC PCR + P   E+A +F    F+K+DV
Sbjct: 8   VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDV 67

Query: 84  DKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEKY 129
           D+L +VA++Y VEAMPTF+ +K+G   DKVVGAR++DLQ  I K+
Sbjct: 68  DELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112

[Close]

BLAST of CmoCh18G012090 vs. TrEMBL
Match: A0A0A0KQG0_CUCSA (Thioredoxin h OS=Cucumis sativus GN=Csa_5G604150 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.9e-57
Identity = 108/131 (82.44%), Postives = 122/131 (93.13%), Query Frame = 1


Query: 1   MGASFTAPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGASFT PRS+SS+  ++ K PTI+ECH+KA+WTA +EATKETNKLMVIDFTAAWC PCR
Sbjct: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
           HMEPTIKE AARFKDVEF+KIDVD+L DVAKEYGVEAMPTFIL+KNGKV+DKVVGARR+D
Sbjct: 61  HMEPTIKELAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120

Query: 121 LQKKIEKYSKY 132
           LQKKIEK+SKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of CmoCh18G012090 vs. TrEMBL
Match: A0A068VME5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012890001 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.1e-38
Identity = 76/128 (59.38%), Postives = 105/128 (82.03%), Query Frame = 1


Query: 1   MGASFTAPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGA+ +A +  +  +S+  K   +V  H+ A+W  H+EA+KETNKL+VIDFTA+WC PC+
Sbjct: 1   MGANVSAWQEANIDSSMALKKSPVVAFHSSAKWKIHFEASKETNKLIVIDFTASWCGPCQ 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
           ++EP+I E AA++ DVEF+KIDVD+L DVA+EYGV+AMPTFILLK GK +DK+VGA++E+
Sbjct: 61  YIEPSINELAAKYTDVEFVKIDVDELDDVAEEYGVQAMPTFILLKKGKAIDKIVGAKKEE 120

Query: 121 LQKKIEKY 129
           LQKKIEK+
Sbjct: 121 LQKKIEKH 128

[Close]

BLAST of CmoCh18G012090 vs. TrEMBL
Match: M5Y5Y2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013299mg PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-37
Identity = 76/130 (58.46%), Postives = 101/130 (77.69%), Query Frame = 1


Query: 1   MGASFTAPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MG + +  +  S   S +GK   I+  H+K +W  H+ A+KE+NKLMVIDFTA WC PCR
Sbjct: 1   MGGNLSHIQDYSDDDSSRGKKSRIMAFHSKDQWNTHFNASKESNKLMVIDFTATWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
            MEPT+KE+A ++ DVEFIK+DVD+L DVA+E+GV+AMP+F+ +K G VVDKVVGAR+E+
Sbjct: 61  AMEPTLKEYADKYTDVEFIKLDVDELPDVAREFGVQAMPSFVFVKKGDVVDKVVGARKEE 120

Query: 121 LQKKIEKYSK 131
           LQKKIEK+ K
Sbjct: 121 LQKKIEKHRK 130

[Close]

BLAST of CmoCh18G012090 vs. TrEMBL
Match: A0A151TFZ4_CAJCA (Thioredoxin H-type 2 OS=Cajanus cajan GN=KK1_012250 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.1e-35
Identity = 76/127 (59.84%), Postives = 103/127 (81.10%), Query Frame = 1


Query: 1   MGASFTAPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGA+F+    +SS +SL      I+  ++ A+W AH++A+KETNKLMVIDFTA WC PC+
Sbjct: 1   MGANFSTYVEKSSPSSL------ILTFNSTAKWKAHFDASKETNKLMVIDFTATWCGPCK 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
           +M+P IKEFAA++ DVEFIKIDVD+L +VA+ + V+AMPTFIL+K GKVV+KV+GA++E+
Sbjct: 61  YMDPIIKEFAAKYTDVEFIKIDVDELMEVAQAFQVQAMPTFILIKKGKVVEKVMGAKKEE 120

Query: 121 LQKKIEK 128
           LQK IEK
Sbjct: 121 LQKLIEK 121

[Close]

BLAST of CmoCh18G012090 vs. TrEMBL
Match: G7K9N6_MEDTR (Thioredoxin OS=Medicago truncatula GN=MTR_5g037950 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 5.4e-35
Identity = 81/130 (62.31%), Postives = 100/130 (76.92%), Query Frame = 1


Query: 1   MGASFTAPRS---RSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCA 60
           MGA+F+   S   +SS  SL      I+  H+ A+W AH+EA+K TNKLMVIDFTA WC 
Sbjct: 1   MGANFSNLESVVEKSSQPSL------ILTFHSTAKWKAHFEASKVTNKLMVIDFTATWCG 60

Query: 61  PCRHMEPTIKEFAARFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGAR 120
           PC++M+P IKE AA++KDVEFIKIDVD+L DVA  + V+AMPTFILLK GKVV+KVVGA+
Sbjct: 61  PCKYMDPIIKELAAKYKDVEFIKIDVDELMDVASAFQVQAMPTFILLKKGKVVEKVVGAK 120

Query: 121 REDLQKKIEK 128
           +E LQK IEK
Sbjct: 121 KEQLQKLIEK 124

[Close]

BLAST of CmoCh18G012090 vs. TAIR10
Match: AT5G39950.1 (AT5G39950.1 thioredoxin 2)

HSP 1 Score: 128.3 bits (321), Expect = 3.6e-30
Identity = 51/116 (43.97%), Postives = 86/116 (74.14%), Query Frame = 1


Query: 12  SSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAA 71
           +++   + +   +++  + A W  H+   KE+NKL+V+DF+A+WC PCR +EP I   A 
Sbjct: 15  ATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMAD 74

Query: 72  RFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEK 128
           +F DV+F+K+DVD+L DVAKE+ V AMPTF+L+K GK +++++GA++++L+KK+ K
Sbjct: 75  KFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130

[Close]

BLAST of CmoCh18G012090 vs. TAIR10
Match: AT1G19730.1 (AT1G19730.1 Thioredoxin superfamily protein)

HSP 1 Score: 125.6 bits (314), Expect = 2.3e-29
Identity = 57/107 (53.27%), Postives = 76/107 (71.03%), Query Frame = 1


Query: 24  IVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAARF-KDVEFIKID 83
           ++ CH    WT   +  KE+NKL+VIDFTA+WC PCR + P   + A +F     F K+D
Sbjct: 8   VIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVD 67

Query: 84  VDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEKYS 130
           VD+L  VAKE+GVEAMPTF+ +K G+VVDK+VGA +EDLQ KI K++
Sbjct: 68  VDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]

BLAST of CmoCh18G012090 vs. TAIR10
Match: AT1G69880.1 (AT1G69880.1 thioredoxin H-type 8)

HSP 1 Score: 119.0 bits (297), Expect = 2.2e-27
Identity = 51/113 (45.13%), Postives = 78/113 (69.03%), Query Frame = 1


Query: 18  KGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAARFKDVE 77
           K  +P IVE  N  +W +   A K+TNKL+VI+FTA WC PC+ +EP ++E AA++ DVE
Sbjct: 33  KVNSPCIVEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVE 92

Query: 78  FIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEKYSK 131
           F+KIDVD L  V  E+ +  +P  + +K G+ VD VVG + ++L++K+ KY++
Sbjct: 93  FVKIDVDVLMSVWMEFNLSTLPAIVFMKRGREVDMVVGVKVDELERKLNKYTQ 145

[Close]

BLAST of CmoCh18G012090 vs. TAIR10
Match: AT1G45145.1 (AT1G45145.1 thioredoxin H-type 5)

HSP 1 Score: 114.4 bits (285), Expect = 5.3e-26
Identity = 48/105 (45.71%), Postives = 72/105 (68.57%), Query Frame = 1


Query: 24  IVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAARFKDVEFIKIDV 83
           ++ CH    W    +   E+ KL+VIDFTA+WC PCR + P   E A +F +V F KIDV
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 84  DKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEKY 129
           D+L  VA+E+ VEAMPTF+ +K G ++D+VVGA ++++ +K+ K+
Sbjct: 67  DELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of CmoCh18G012090 vs. TAIR10
Match: AT5G42980.1 (AT5G42980.1 thioredoxin 3)

HSP 1 Score: 112.8 bits (281), Expect = 1.6e-25
Identity = 48/105 (45.71%), Postives = 71/105 (67.62%), Query Frame = 1


Query: 24  IVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCRHMEPTIKEFAARFKDVEFIKIDV 83
           ++ CH   +WT   +A  E+ KL+VIDFTA WC PCR + P   + A +  DV F K+DV
Sbjct: 7   VIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDV 66

Query: 84  DKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARREDLQKKIEKY 129
           D+L  VA+E+ V+AMPTFI +K G++ + VVGA +E++   +EK+
Sbjct: 67  DELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKH 111

[Close]

BLAST of CmoCh18G012090 vs. NCBI nr
Match: gi|449434841|ref|XP_004135204.1| (PREDICTED: thioredoxin H-type [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 4.2e-57
Identity = 108/131 (82.44%), Postives = 122/131 (93.13%), Query Frame = 1


Query: 1   MGASFTAPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGASFT PRS+SS+  ++ K PTI+ECH+KA+WTA +EATKETNKLMVIDFTAAWC PCR
Sbjct: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
           HMEPTIKE AARFKDVEF+KIDVD+L DVAKEYGVEAMPTFIL+KNGKV+DKVVGARR+D
Sbjct: 61  HMEPTIKELAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120

Query: 121 LQKKIEKYSKY 132
           LQKKIEK+SKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of CmoCh18G012090 vs. NCBI nr
Match: gi|659090963|ref|XP_008446296.1| (PREDICTED: thioredoxin H-type-like [Cucumis melo])

HSP 1 Score: 218.8 bits (556), Expect = 5.7e-54
Identity = 103/131 (78.63%), Postives = 118/131 (90.08%), Query Frame = 1


Query: 1   MGASFTAPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGASFT P S+SS+  ++ K PTI+ECH+KA+WTA +EATKETNKLMVIDF AAWC PCR
Sbjct: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
           HMEP IKEFAARFKDVEF+KIDVD+L D+A EYGVEAMPTFIL+KNGKV+DKVVG RRE+
Sbjct: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120

Query: 121 LQKKIEKYSKY 132
           LQKKIEK+SKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of CmoCh18G012090 vs. NCBI nr
Match: gi|661866679|emb|CDP21876.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 166.0 bits (419), Expect = 4.4e-38
Identity = 76/128 (59.38%), Postives = 105/128 (82.03%), Query Frame = 1


Query: 1   MGASFTAPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MGA+ +A +  +  +S+  K   +V  H+ A+W  H+EA+KETNKL+VIDFTA+WC PC+
Sbjct: 1   MGANVSAWQEANIDSSMALKKSPVVAFHSSAKWKIHFEASKETNKLIVIDFTASWCGPCQ 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
           ++EP+I E AA++ DVEF+KIDVD+L DVA+EYGV+AMPTFILLK GK +DK+VGA++E+
Sbjct: 61  YIEPSINELAAKYTDVEFVKIDVDELDDVAEEYGVQAMPTFILLKKGKAIDKIVGAKKEE 120

Query: 121 LQKKIEKY 129
           LQKKIEK+
Sbjct: 121 LQKKIEKH 128

[Close]

BLAST of CmoCh18G012090 vs. NCBI nr
Match: gi|645229951|ref|XP_008221701.1| (PREDICTED: thioredoxin H2-like [Prunus mume])

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-37
Identity = 76/130 (58.46%), Postives = 102/130 (78.46%), Query Frame = 1


Query: 1   MGASFTAPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MG + +  +  S   S +GK   I+  H+K +W+ H+ A+KE+NKLMVIDFTA WC PCR
Sbjct: 1   MGGNLSHIQDYSDDDSSRGKKSRIMAFHSKDQWSTHFNASKESNKLMVIDFTATWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
            MEPT+KE+A ++ DVEFIK+DVD+L DVA+E+GV+AMP+F+ +K G VVDKVVGAR+E+
Sbjct: 61  AMEPTLKEYADKYTDVEFIKLDVDELPDVAREFGVQAMPSFVFVKKGDVVDKVVGARKEE 120

Query: 121 LQKKIEKYSK 131
           LQKKIEK+ K
Sbjct: 121 LQKKIEKHRK 130

[Close]

BLAST of CmoCh18G012090 vs. NCBI nr
Match: gi|596290038|ref|XP_007226116.1| (hypothetical protein PRUPE_ppa013299mg [Prunus persica])

HSP 1 Score: 164.1 bits (414), Expect = 1.7e-37
Identity = 76/130 (58.46%), Postives = 101/130 (77.69%), Query Frame = 1


Query: 1   MGASFTAPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60
           MG + +  +  S   S +GK   I+  H+K +W  H+ A+KE+NKLMVIDFTA WC PCR
Sbjct: 1   MGGNLSHIQDYSDDDSSRGKKSRIMAFHSKDQWNTHFNASKESNKLMVIDFTATWCGPCR 60

Query: 61  HMEPTIKEFAARFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120
            MEPT+KE+A ++ DVEFIK+DVD+L DVA+E+GV+AMP+F+ +K G VVDKVVGAR+E+
Sbjct: 61  AMEPTLKEYADKYTDVEFIKLDVDELPDVAREFGVQAMPSFVFVKKGDVVDKVVGARKEE 120

Query: 121 LQKKIEKYSK 131
           LQKKIEK+ K
Sbjct: 121 LQKKIEKHRK 130

The following BLAST results are available for this feature:

BLAST of CmoCh18G012090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRXH2_ARATH	6.3e-29	43.97	Thioredoxin H2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2	[more]
TRXH4_ARATH	4.1e-28	53.27	Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2	[more]
TRH21_ORYSJ	1.2e-27	45.60	Thioredoxin H2-1 OS=Oryza sativa subsp. japonica GN=Os07g0190800 PE=2 SV=1	[more]
TRXH_ORYSI	1.6e-27	50.48	Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1	[more]
TRXH1_ORYSJ	1.6e-27	50.48	Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1	[more]

BLAST of CmoCh18G012090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQG0_CUCSA	2.9e-57	82.44	Thioredoxin h OS=Cucumis sativus GN=Csa_5G604150 PE=4 SV=1	[more]
A0A068VME5_COFCA	3.1e-38	59.38	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012890001 PE=4 SV=1	[more]
M5Y5Y2_PRUPE	1.2e-37	58.46	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013299mg PE=4 SV=1	[more]
A0A151TFZ4_CAJCA	4.1e-35	59.84	Thioredoxin H-type 2 OS=Cajanus cajan GN=KK1_012250 PE=4 SV=1	[more]
G7K9N6_MEDTR	5.4e-35	62.31	Thioredoxin OS=Medicago truncatula GN=MTR_5g037950 PE=4 SV=1	[more]

BLAST of CmoCh18G012090 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G39950.1	3.6e-30	43.97	thioredoxin 2	[more]
AT1G19730.1	2.3e-29	53.27	Thioredoxin superfamily protein	[more]
AT1G69880.1	2.2e-27	45.13	thioredoxin H-type 8	[more]
AT1G45145.1	5.3e-26	45.71	thioredoxin H-type 5	[more]
AT5G42980.1	1.6e-25	45.71	thioredoxin 3	[more]

BLAST of CmoCh18G012090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434841\|ref\|XP_004135204.1\|	4.2e-57	82.44	PREDICTED: thioredoxin H-type [Cucumis sativus]	[more]
gi\|659090963\|ref\|XP_008446296.1\|	5.7e-54	78.63	PREDICTED: thioredoxin H-type-like [Cucumis melo]	[more]
gi\|661866679\|emb\|CDP21876.1\|	4.4e-38	59.38	unnamed protein product [Coffea canephora]	[more]
gi\|645229951\|ref\|XP_008221701.1\|	1.3e-37	58.46	PREDICTED: thioredoxin H2-like [Prunus mume]	[more]
gi\|596290038\|ref\|XP_007226116.1\|	1.7e-37	58.46	hypothetical protein PRUPE_ppa013299mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005746	Thioredoxin
IPR012336	Thioredoxin-like_fold
IPR013766	Thioredoxin_domain
IPR017937	Thioredoxin_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0006662	glycerol ether metabolic process
GO:0045454	cell redox homeostasis

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G012090.1	CmoCh18G012090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005746	Thioredoxin	PANTHER	PTHR10438	THIOREDOXIN	coord: 9..130 score: 8.5
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 14..128 score: 1.3
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 18..129 score: 3.9
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 28..127 score: 6.7
IPR013766	Thioredoxin domain	PROFILE	PS51352	THIOREDOXIN_2	coord: 1..130 score: 1
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 48..66 scor
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 55..64 score: 7.2E-6coord: 47..55 score: 7.2E-6coord: 94..105 score: 7.
None	No IPR available	PANTHER	PTHR10438:SF278	THIOREDOXIN H7-RELATED	coord: 9..130 score: 8.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh18G012090	Cucsa.285490	Cucumber (Gy14) v1	cgycmoB0789
CmoCh18G012090	CmaCh18G011880	Cucurbita maxima (Rimu)	cmacmoB406
CmoCh18G012090	CmaCh04G016220	Cucurbita maxima (Rimu)	cmacmoB709
CmoCh18G012090	Cla010144	Watermelon (97103) v1	cmowmB365
CmoCh18G012090	Csa5G604150	Cucumber (Chinese Long) v2	cmocuB406
CmoCh18G012090	MELO3C012053	Melon (DHL92) v3.5.1	cmomeB344
CmoCh18G012090	ClCG05G024700	Watermelon (Charleston Gray)	cmowcgB358
CmoCh18G012090	CSPI05G23290	Wild cucumber (PI 183967)	cmocpiB411
CmoCh18G012090	Lsi04G004810	Bottle gourd (USVL1VR-Ls)	cmolsiB364
CmoCh18G012090	Cp4.1LG09g01410	Cucurbita pepo (Zucchini)	cmocpeB376
CmoCh18G012090	Cp4.1LG01g12760	Cucurbita pepo (Zucchini)	cmocpeB395
CmoCh18G012090	MELO3C012053.2	Melon (DHL92) v3.6.1	cmomedB395
CmoCh18G012090	CsaV3_5G032200	Cucumber (Chinese Long) v3	cmocucB0487
CmoCh18G012090	Cla97C05G106810	Watermelon (97103) v2	cmowmbB403
CmoCh18G012090	CsGy5G022790	Cucumber (Gy14) v2	cgybcmoB603
CmoCh18G012090	Carg01736	Silver-seed gourd	carcmoB1132
CmoCh18G012090	Carg17235	Silver-seed gourd	carcmoB0140

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh18G012090	CmoCh04G017000	Cucurbita moschata (Rifu)	cmocmoB340

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G012090	Wax gourd	cmowgoB0535