Cp4.1LG01g09140 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g09140
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBHLH transcription factor
LocationCp4.1LG01 : 4499075 .. 4500318 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCAGGCGAATTTGTTGGGGGAGGATTGAGGGCCACCGTTGCTCCAGTGGGGAAGCGATGGGGGCGGAGGGGGAAGATGGTGAAGAAGAGGGAGGAGATTGAGAAGCAAAGAATGACACACATAGCTGTTGAACGCAATAGGAGAAAGCAAATGAATGAGTATCTGTGTGTGCTGAGATCCATGATGCCTTCTTCTTACACCCAAAGGGTAAGTAATCTCATCCATATCCCATCTTCTTCCATTGCATAATAATGATAAGAAAAGGTTTTAATTTGCAGGGAGATCAGGCGTCAATCGTGGGAGGGACCATCAAGTTGGTGAGGGAGTTAGAACAGCTTGTGCAGTGGTTAGAGGGAAAGAAGCAAAGGCATGAACATATTTGTTATGCCGGCCAGGATTATTCAGGGGAATCGAAGGTGGAGGTGAGGGTGATAGAGAGCTACGCCAATATAAAAATGAGGGCGGAGAATCGGCCGAATCAGCTTCTAAAAGTGGCGCTGGAATTGCATTCTCTTAAACTTTTGATTCTTCACGTCAACGTCACTACCATCGGCCAAATGGTTTTTTATTGTTTTAGCGTTAAGGTAAAGAGATAGAGTATTAAGTTCTTAAATATGAGATGAGAATCTTACTTTGGCCTAAATCATTACTTTTTTTTTTTAAAATTTAAAATAATTTTGGTAATAGTTGATTGAATTATTTGAATATGGCAGATTGAAGATGGATGTGAACTAAGCACTGTGGGTGAGATTACTGCAGCTGTGAATCAAATGTTCCAACGGATCCTTACGGAAAAGGGTGACTAGTTTCAATGCCAATATATAATTTTTAATGTTATAGCATTTTCTTTTTTAAGTTTTAATCTCATTAATGTCCCTTTTGCAACGTTCTAATGATGATTTCCAATATTAAAACACCTCTTTTCGATTATTATTTTTTTTTAATTTTACTCATTTTTTCTTACTATTTGATATTGAAAAATATTTATTTTTTAGTTTAAATCTATCGGGATAAATTTGAACTTTTGATAATGAATATATAAATTCTCATTGAAAATAACGTCTATTTAACTTATTATTATGAAAAAAAAACTACCATCTTGAAGTTTATTTATTTATTTATATATATATATATAATGGGGAAGGAGGGGGTGAAAGAAAGAGGAAGATGGGGTAAAAGATAAAAAATAGAACATCTTATTTTACTTAAAAAAAAAAAAGAAAAAAAAAACAAATAAA

mRNA sequence

ATGGAAGCAGGCGAATTTGTTGGGGGAGGATTGAGGGCCACCGTTGCTCCAGTGGGGAAGCGATGGGGGCGGAGGGGGAAGATGGTGAAGAAGAGGGAGGAGATTGAGAAGCAAAGAATGACACACATAGCTGTTGAACGCAATAGGAGAAAGCAAATGAATGAGTATCTGTGTGTGCTGAGATCCATGATGCCTTCTTCTTACACCCAAAGGGGAGATCAGGCGTCAATCGTGGGAGGGACCATCAAGTTGGTGAGGGAGTTAGAACAGCTTGTGCAGTGGTTAGAGGGAAAGAAGCAAAGGCATGAACATATTTGTTATGCCGGCCAGGATTATTCAGGGGAATCGAAGGTGGAGGTGAGGGTGATAGAGAGCTACGCCAATATAAAAATGAGGGCGGAGAATCGGCCGAATCAGCTTCTAAAAGTGGCGCTGGAATTGCATTCTCTTAAACTTTTGATTCTTCACGTCAACGTCACTACCATCGGCCAAATGGTTTTTTATTGTTTTAGCGTTAAGATTGAAGATGGATGTGAACTAAGCACTGTGGGTGAGATTACTGCAGCTGTGAATCAAATGTTCCAACGGATCCTTACGGAAAAGGGTGACTAGTTTCAATGCCAATATATAATTTTTAATGTTATAGCATTTTCTTTTTTAAGTTTTAATCTCATTAATGTCCCTTTTGCAACGTTCTAATGATGATTTCCAATATTAAAACACCTCTTTTCGATTATTATTTTTTTTTAATTTTACTCATTTTTTCTTACTATTTGATATTGAAAAATATTTATTTTTTAGTTTAAATCTATCGGGATAAATTTGAACTTTTGATAATGAATATATAAATTCTCATTGAAAATAACGTCTATTTAACTTATTATTATGAAAAAAAAACTACCATCTTGAAGTTTATTTATTTATTTATATATATATATATAATGGGGAAGGAGGGGGTGAAAGAAAGAGGAAGATGGGGTAAAAGATAAAAAATAGAACATCTTATTTTACTTAAAAAAAAAAAAGAAAAAAAAAACAAATAAA

Coding sequence (CDS)

ATGGAAGCAGGCGAATTTGTTGGGGGAGGATTGAGGGCCACCGTTGCTCCAGTGGGGAAGCGATGGGGGCGGAGGGGGAAGATGGTGAAGAAGAGGGAGGAGATTGAGAAGCAAAGAATGACACACATAGCTGTTGAACGCAATAGGAGAAAGCAAATGAATGAGTATCTGTGTGTGCTGAGATCCATGATGCCTTCTTCTTACACCCAAAGGGGAGATCAGGCGTCAATCGTGGGAGGGACCATCAAGTTGGTGAGGGAGTTAGAACAGCTTGTGCAGTGGTTAGAGGGAAAGAAGCAAAGGCATGAACATATTTGTTATGCCGGCCAGGATTATTCAGGGGAATCGAAGGTGGAGGTGAGGGTGATAGAGAGCTACGCCAATATAAAAATGAGGGCGGAGAATCGGCCGAATCAGCTTCTAAAAGTGGCGCTGGAATTGCATTCTCTTAAACTTTTGATTCTTCACGTCAACGTCACTACCATCGGCCAAATGGTTTTTTATTGTTTTAGCGTTAAGATTGAAGATGGATGTGAACTAAGCACTGTGGGTGAGATTACTGCAGCTGTGAATCAAATGTTCCAACGGATCCTTACGGAAAAGGGTGACTAG

Protein sequence

MEAGEFVGGGLRATVAPVGKRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKLVRELEQLVQWLEGKKQRHEHICYAGQDYSGESKVEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIGQMVFYCFSVKIEDGCELSTVGEITAAVNQMFQRILTEKGD
BLAST of Cp4.1LG01g09140 vs. Swiss-Prot
Match: BH094_ARATH (Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2 SV=2)

HSP 1 Score: 170.2 bits (430), Expect = 2.3e-41
Identity = 99/212 (46.70%), Postives = 132/212 (62.26%), Query Frame = 1

Query: 17  PVGKRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQAS 76
           P  +R  RR +  K +EEIE QRMTHIAVERNRRKQMNEYL VLRS+MPSSY QRGDQAS
Sbjct: 92  PQHRRKRRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQAS 151

Query: 77  IVGGTIKLVRELEQLVQWLEGKKQR------------------------HEHICYAGQDY 136
           IVGG I  V+ELE ++Q +E K+ R                         ++   +  D 
Sbjct: 152 IVGGAINYVKELEHILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDV 211

Query: 137 ----SGESKVEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIGQMVFY 196
               S  +++EV V ES+ANIK+  + +P QLLK+   L SL+L +LH+NVTT+   + Y
Sbjct: 212 PESSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILY 271

Query: 197 CFSVKIEDGCELSTVGEITAAVNQMFQRILTE 201
             SV++E+G +L+TV +I  A+NQ  +RI  E
Sbjct: 272 SISVRVEEGSQLNTVDDIATALNQTIRRIQEE 303

BLAST of Cp4.1LG01g09140 vs. Swiss-Prot
Match: BH096_ARATH (Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 9.5e-40
Identity = 100/213 (46.95%), Postives = 131/213 (61.50%), Query Frame = 1

Query: 19  GKRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIV 78
           G+R  RR +  K +EEIE QRMTHIAVERNRRKQMNEYL VLRS+MP  Y QRGDQASIV
Sbjct: 104 GRRKRRRTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIV 163

Query: 79  GGTIKLVRELEQLVQWLEGKKQRHEHICYAGQD---------------------YS---- 138
           GG I  ++ELE  +Q +E   +       AG D                     YS    
Sbjct: 164 GGAINYLKELEHHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPT 223

Query: 139 ------GESKVEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIGQMVF 198
                 G +++EV ++ES+A++K+ A+ RP QLLK+   + SL+L +LH+NVTT    V 
Sbjct: 224 SAAAAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVL 283

Query: 199 YCFSVKIEDGCELSTVGEITAAVNQMFQRILTE 201
           Y  SVK+E+G +L+TV +I AAVNQ+ +RI  E
Sbjct: 284 YSISVKVEEGSQLNTVEDIAAAVNQILRRIEEE 316

BLAST of Cp4.1LG01g09140 vs. Swiss-Prot
Match: BH057_ARATH (Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 7.8e-34
Identity = 84/209 (40.19%), Postives = 124/209 (59.33%), Query Frame = 1

Query: 20  KRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 79
           KR  +R +  K ++E+E QRMTHIAVERNRR+QMNE+L  LRS+MP S+ QRGDQASIVG
Sbjct: 95  KRKRKRTRAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVG 154

Query: 80  GTIKLVRELEQLVQWLEGKKQR--------------HEHICYAGQDYSGES--------- 139
           G I  ++ELEQL+Q LE +K++                 +       S  S         
Sbjct: 155 GAIDFIKELEQLLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTA 214

Query: 140 --------KVEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIGQMVFY 198
                   +VE  VI+++ ++K+R +    Q+LK  + +  LKL ILH+ +++    V Y
Sbjct: 215 RFGGGDTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIY 274

BLAST of Cp4.1LG01g09140 vs. Swiss-Prot
Match: BH067_ARATH (Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-33
Identity = 84/196 (42.86%), Postives = 122/196 (62.24%), Query Frame = 1

Query: 20  KRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 79
           KR  R+ K  K  EEIE QR+ HIAVERNRR+QMNE++  LR+++P SY QRGDQASIVG
Sbjct: 158 KRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVG 217

Query: 80  GTIKLVRELEQLVQWLEGKKQRHEH--------------------ICYAGQDYSGESKVE 139
           G I  V+ LEQ++Q LE +K+  +                     +    +D +   K+E
Sbjct: 218 GAINYVKVLEQIIQSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIE 277

Query: 140 VRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIG-QMVFYCFSVKIEDGC 195
             VI+++ ++K++ E +  QLLK  + L  LKL +LH+N+TT     V Y F++K+ED C
Sbjct: 278 ATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDEC 337

BLAST of Cp4.1LG01g09140 vs. Swiss-Prot
Match: BH070_ARATH (Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.9e-33
Identity = 88/197 (44.67%), Postives = 118/197 (59.90%), Query Frame = 1

Query: 20  KRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 79
           KR  RR K  K  EEIE QRMTHIAVERNRR+QMN +L  LRS++PSSY QRGDQASIVG
Sbjct: 173 KRKRRRTKPTKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVG 232

Query: 80  GTIKLVRELEQLVQWLEGKKQRHEHICYAGQ---------------------DYSGESKV 139
           G I  V+ LEQ +Q LE +K+  +      Q                     + S + K+
Sbjct: 233 GAIDFVKILEQQLQSLEAQKRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKI 292

Query: 140 EVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTT-IGQMVFYCFSVKIEDG 195
           E  VIES+ N+K++   +  QLL+  + L  L+  +LH+N+T+     V Y F++K+ED 
Sbjct: 293 EATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDE 352

BLAST of Cp4.1LG01g09140 vs. TrEMBL
Match: V7ARK2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G033800g PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.5e-44
Identity = 105/205 (51.22%), Postives = 136/205 (66.34%), Query Frame = 1

Query: 13  ATVAPVGKRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRG 72
           AT     +R  RR K  K +EEIE QR THIAVERNRRKQMNEYL VLRS+MPSSY QRG
Sbjct: 95  ATATTTSRRKRRRTKSEKNKEEIENQRTTHIAVERNRRKQMNEYLAVLRSLMPSSYVQRG 154

Query: 73  DQASIVGGTIKLVRELEQLVQWLEGKKQRH----------EHICYAGQDYSGESK----- 132
           DQASI+GG I  V+ELEQ++Q +EG+K+R           E   +      G  K     
Sbjct: 155 DQASIIGGAINFVKELEQVLQSMEGEKRRKQGEENVGAFAEFFTFPQYTTRGTQKQEQKE 214

Query: 133 -----VEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIGQMVFYCFSV 192
                +EV +++S+AN+K+ ++ +P+ L+K+ L L SL+L ILH+NVTT+  MV Y  SV
Sbjct: 215 WAVADIEVTMVDSHANLKILSKKQPSHLMKIVLGLQSLRLTILHLNVTTLHHMVLYSISV 274

Query: 193 KIEDGCELSTVGEITAAVNQMFQRI 198
           K+E+GCEL+TV EI AAVNQ+   I
Sbjct: 275 KVEEGCELNTVDEIAAAVNQLLGTI 299

BLAST of Cp4.1LG01g09140 vs. TrEMBL
Match: A0A0L9UGA8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g194400 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.0e-44
Identity = 106/212 (50.00%), Postives = 139/212 (65.57%), Query Frame = 1

Query: 13  ATVAPVGKRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRG 72
           AT     +R  RR K  K +EEIE QRMTHIAVERNRRKQMNEYL VLRS+MPSSY QRG
Sbjct: 98  ATATTTTRRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYVQRG 157

Query: 73  DQASIVGGTIKLVRELEQLVQWLEGKKQR----HEHICYAG------------------- 132
           DQASI+GG I  V+ELEQ++Q +EG+K+R     E++   G                   
Sbjct: 158 DQASIIGGAINFVKELEQVLQSMEGEKRRKQGEEENVGLNGWTTPFAEFFTFPQYTTRGN 217

Query: 133 ----QDYSGESKVEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIGQM 192
               Q     + +EV +++S+AN+K+ A+ +P+ L+K+ L L +L+L ILH+NVTT+  M
Sbjct: 218 QKQEQKQWAVADIEVTMVDSHANLKILAKKQPSHLMKIVLGLQTLRLTILHLNVTTLHHM 277

Query: 193 VFYCFSVKIEDGCELSTVGEITAAVNQMFQRI 198
           V Y  SVK+E+GCEL+TV EI AAVNQ+   I
Sbjct: 278 VLYSISVKVEEGCELNTVDEIAAAVNQLLGTI 309

BLAST of Cp4.1LG01g09140 vs. TrEMBL
Match: A0A0S3RD31_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G117000 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.0e-44
Identity = 106/212 (50.00%), Postives = 139/212 (65.57%), Query Frame = 1

Query: 13  ATVAPVGKRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRG 72
           AT     +R  RR K  K +EEIE QRMTHIAVERNRRKQMNEYL VLRS+MPSSY QRG
Sbjct: 98  ATATTTTRRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYVQRG 157

Query: 73  DQASIVGGTIKLVRELEQLVQWLEGKKQR----HEHICYAG------------------- 132
           DQASI+GG I  V+ELEQ++Q +EG+K+R     E++   G                   
Sbjct: 158 DQASIIGGAINFVKELEQVLQSMEGEKRRKQGEEENVGLNGWTTPFAEFFTFPQYTTRGN 217

Query: 133 ----QDYSGESKVEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIGQM 192
               Q     + +EV +++S+AN+K+ A+ +P+ L+K+ L L +L+L ILH+NVTT+  M
Sbjct: 218 QKQEQKQWAVADIEVTMVDSHANLKILAKKQPSHLMKIVLGLQTLRLTILHLNVTTLHHM 277

Query: 193 VFYCFSVKIEDGCELSTVGEITAAVNQMFQRI 198
           V Y  SVK+E+GCEL+TV EI AAVNQ+   I
Sbjct: 278 VLYSISVKVEEGCELNTVDEIAAAVNQLLGTI 309

BLAST of Cp4.1LG01g09140 vs. TrEMBL
Match: I1JVA4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G098400 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 9.9e-44
Identity = 105/216 (48.61%), Postives = 138/216 (63.89%), Query Frame = 1

Query: 11  LRATVAPVGKRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQ 70
           + ATV    +R  RR K  K  EEIE QR THIAVERNRRKQMNEYL VLRS+MPSSY Q
Sbjct: 103 VEATVTATSRRKRRRTKSAKNTEEIENQRRTHIAVERNRRKQMNEYLAVLRSLMPSSYVQ 162

Query: 71  RGDQASIVGGTIKLVRELEQLVQWLEGKKQRHE-----------------------HICY 130
           RGDQASI+GG I  V+ELEQL+Q +EG+K+ ++                           
Sbjct: 163 RGDQASIIGGAINFVKELEQLLQSMEGQKRTNQAQENVVGLNGSTTTPFAEFFTFPQYTT 222

Query: 131 AGQDYSGESK------VEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTT 190
            G+  + E K      +EV +++S+AN+K+ ++ +P QL+K+ + L SL L ILH+NV+T
Sbjct: 223 RGRTMAQEQKQWAVADIEVTMVDSHANLKVLSKKQPGQLMKIVVGLQSLMLSILHLNVST 282

Query: 191 IGQMVFYCFSVKIEDGCELSTVGEITAAVNQMFQRI 198
           +  MV Y  SVK+EDGC L+TV EI AAVNQ+ + I
Sbjct: 283 LDDMVLYSISVKVEDGCRLNTVDEIAAAVNQLLRTI 318

BLAST of Cp4.1LG01g09140 vs. TrEMBL
Match: E0CRQ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g06650 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.9e-43
Identity = 106/211 (50.24%), Postives = 136/211 (64.45%), Query Frame = 1

Query: 14  TVAPVGKRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGD 73
           + +  G+R  RR K  K +EE+E QRMTHIAVERNRRKQMNEYL VLRS+MP SYTQRGD
Sbjct: 93  STSTTGRRKRRRTKSCKNKEEVENQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYTQRGD 152

Query: 74  QASIVGGTIKLVRELEQLVQWLEGKKQRHEHI----------CYAGQDYS---------- 133
           QASI+GG I  V+ELEQL+Q LE +K   +             +    YS          
Sbjct: 153 QASIIGGAINFVKELEQLLQSLEAEKSSKQQTNNSVSSPFSNFFTFPQYSTRATHCTKDS 212

Query: 134 --GESK-----VEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIGQMV 193
             G+++     +EV ++ES+ANIK+ ++ +  QLLK+     SL L ILH+NVTT  QMV
Sbjct: 213 MMGDNRWAVADIEVTMVESHANIKILSKRKTKQLLKIVAGFQSLSLTILHLNVTTFDQMV 272

Query: 194 FYCFSVKIEDGCELSTVGEITAAVNQMFQRI 198
            Y  SVK+E+ C+L+TV EI AAVNQM +RI
Sbjct: 273 LYSLSVKVEEECQLTTVDEIAAAVNQMLRRI 303

BLAST of Cp4.1LG01g09140 vs. TAIR10
Match: AT1G22490.1 (AT1G22490.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-42
Identity = 99/212 (46.70%), Postives = 132/212 (62.26%), Query Frame = 1

Query: 17  PVGKRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQAS 76
           P  +R  RR +  K +EEIE QRMTHIAVERNRRKQMNEYL VLRS+MPSSY QRGDQAS
Sbjct: 92  PQHRRKRRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQAS 151

Query: 77  IVGGTIKLVRELEQLVQWLEGKKQR------------------------HEHICYAGQDY 136
           IVGG I  V+ELE ++Q +E K+ R                         ++   +  D 
Sbjct: 152 IVGGAINYVKELEHILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDV 211

Query: 137 ----SGESKVEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIGQMVFY 196
               S  +++EV V ES+ANIK+  + +P QLLK+   L SL+L +LH+NVTT+   + Y
Sbjct: 212 PESSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILY 271

Query: 197 CFSVKIEDGCELSTVGEITAAVNQMFQRILTE 201
             SV++E+G +L+TV +I  A+NQ  +RI  E
Sbjct: 272 SISVRVEEGSQLNTVDDIATALNQTIRRIQEE 303

BLAST of Cp4.1LG01g09140 vs. TAIR10
Match: AT1G72210.1 (AT1G72210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 164.9 bits (416), Expect = 5.3e-41
Identity = 100/213 (46.95%), Postives = 131/213 (61.50%), Query Frame = 1

Query: 19  GKRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIV 78
           G+R  RR +  K +EEIE QRMTHIAVERNRRKQMNEYL VLRS+MP  Y QRGDQASIV
Sbjct: 104 GRRKRRRTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIV 163

Query: 79  GGTIKLVRELEQLVQWLEGKKQRHEHICYAGQD---------------------YS---- 138
           GG I  ++ELE  +Q +E   +       AG D                     YS    
Sbjct: 164 GGAINYLKELEHHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPT 223

Query: 139 ------GESKVEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIGQMVF 198
                 G +++EV ++ES+A++K+ A+ RP QLLK+   + SL+L +LH+NVTT    V 
Sbjct: 224 SAAAAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVL 283

Query: 199 YCFSVKIEDGCELSTVGEITAAVNQMFQRILTE 201
           Y  SVK+E+G +L+TV +I AAVNQ+ +RI  E
Sbjct: 284 YSISVKVEEGSQLNTVEDIAAAVNQILRRIEEE 316

BLAST of Cp4.1LG01g09140 vs. TAIR10
Match: AT4G01460.1 (AT4G01460.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 145.2 bits (365), Expect = 4.4e-35
Identity = 84/209 (40.19%), Postives = 124/209 (59.33%), Query Frame = 1

Query: 20  KRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 79
           KR  +R +  K ++E+E QRMTHIAVERNRR+QMNE+L  LRS+MP S+ QRGDQASIVG
Sbjct: 95  KRKRKRTRAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVG 154

Query: 80  GTIKLVRELEQLVQWLEGKKQR--------------HEHICYAGQDYSGES--------- 139
           G I  ++ELEQL+Q LE +K++                 +       S  S         
Sbjct: 155 GAIDFIKELEQLLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTA 214

Query: 140 --------KVEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIGQMVFY 198
                   +VE  VI+++ ++K+R +    Q+LK  + +  LKL ILH+ +++    V Y
Sbjct: 215 RFGGGDTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIY 274

BLAST of Cp4.1LG01g09140 vs. TAIR10
Match: AT3G61950.1 (AT3G61950.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 144.8 bits (364), Expect = 5.7e-35
Identity = 84/196 (42.86%), Postives = 122/196 (62.24%), Query Frame = 1

Query: 20  KRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 79
           KR  R+ K  K  EEIE QR+ HIAVERNRR+QMNE++  LR+++P SY QRGDQASIVG
Sbjct: 158 KRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVG 217

Query: 80  GTIKLVRELEQLVQWLEGKKQRHEH--------------------ICYAGQDYSGESKVE 139
           G I  V+ LEQ++Q LE +K+  +                     +    +D +   K+E
Sbjct: 218 GAINYVKVLEQIIQSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIE 277

Query: 140 VRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIG-QMVFYCFSVKIEDGC 195
             VI+++ ++K++ E +  QLLK  + L  LKL +LH+N+TT     V Y F++K+ED C
Sbjct: 278 ATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDEC 337

BLAST of Cp4.1LG01g09140 vs. TAIR10
Match: AT2G46810.1 (AT2G46810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 2.2e-34
Identity = 88/197 (44.67%), Postives = 118/197 (59.90%), Query Frame = 1

Query: 20  KRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 79
           KR  RR K  K  EEIE QRMTHIAVERNRR+QMN +L  LRS++PSSY QRGDQASIVG
Sbjct: 173 KRKRRRTKPTKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVG 232

Query: 80  GTIKLVRELEQLVQWLEGKKQRHEHICYAGQ---------------------DYSGESKV 139
           G I  V+ LEQ +Q LE +K+  +      Q                     + S + K+
Sbjct: 233 GAIDFVKILEQQLQSLEAQKRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKI 292

Query: 140 EVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTT-IGQMVFYCFSVKIEDG 195
           E  VIES+ N+K++   +  QLL+  + L  L+  +LH+N+T+     V Y F++K+ED 
Sbjct: 293 EATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDE 352

BLAST of Cp4.1LG01g09140 vs. NCBI nr
Match: gi|593268221|ref|XP_007136288.1| (hypothetical protein PHAVU_009G033800g [Phaseolus vulgaris])

HSP 1 Score: 187.6 bits (475), Expect = 2.2e-44
Identity = 105/205 (51.22%), Postives = 136/205 (66.34%), Query Frame = 1

Query: 13  ATVAPVGKRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRG 72
           AT     +R  RR K  K +EEIE QR THIAVERNRRKQMNEYL VLRS+MPSSY QRG
Sbjct: 95  ATATTTSRRKRRRTKSEKNKEEIENQRTTHIAVERNRRKQMNEYLAVLRSLMPSSYVQRG 154

Query: 73  DQASIVGGTIKLVRELEQLVQWLEGKKQRH----------EHICYAGQDYSGESK----- 132
           DQASI+GG I  V+ELEQ++Q +EG+K+R           E   +      G  K     
Sbjct: 155 DQASIIGGAINFVKELEQVLQSMEGEKRRKQGEENVGAFAEFFTFPQYTTRGTQKQEQKE 214

Query: 133 -----VEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIGQMVFYCFSV 192
                +EV +++S+AN+K+ ++ +P+ L+K+ L L SL+L ILH+NVTT+  MV Y  SV
Sbjct: 215 WAVADIEVTMVDSHANLKILSKKQPSHLMKIVLGLQSLRLTILHLNVTTLHHMVLYSISV 274

Query: 193 KIEDGCELSTVGEITAAVNQMFQRI 198
           K+E+GCEL+TV EI AAVNQ+   I
Sbjct: 275 KVEEGCELNTVDEIAAAVNQLLGTI 299

BLAST of Cp4.1LG01g09140 vs. NCBI nr
Match: gi|920698521|gb|KOM41746.1| (hypothetical protein LR48_Vigan04g194400 [Vigna angularis])

HSP 1 Score: 187.2 bits (474), Expect = 2.9e-44
Identity = 106/212 (50.00%), Postives = 139/212 (65.57%), Query Frame = 1

Query: 13  ATVAPVGKRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRG 72
           AT     +R  RR K  K +EEIE QRMTHIAVERNRRKQMNEYL VLRS+MPSSY QRG
Sbjct: 98  ATATTTTRRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYVQRG 157

Query: 73  DQASIVGGTIKLVRELEQLVQWLEGKKQR----HEHICYAG------------------- 132
           DQASI+GG I  V+ELEQ++Q +EG+K+R     E++   G                   
Sbjct: 158 DQASIIGGAINFVKELEQVLQSMEGEKRRKQGEEENVGLNGWTTPFAEFFTFPQYTTRGN 217

Query: 133 ----QDYSGESKVEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIGQM 192
               Q     + +EV +++S+AN+K+ A+ +P+ L+K+ L L +L+L ILH+NVTT+  M
Sbjct: 218 QKQEQKQWAVADIEVTMVDSHANLKILAKKQPSHLMKIVLGLQTLRLTILHLNVTTLHHM 277

Query: 193 VFYCFSVKIEDGCELSTVGEITAAVNQMFQRI 198
           V Y  SVK+E+GCEL+TV EI AAVNQ+   I
Sbjct: 278 VLYSISVKVEEGCELNTVDEIAAAVNQLLGTI 309

BLAST of Cp4.1LG01g09140 vs. NCBI nr
Match: gi|356508057|ref|XP_003522778.1| (PREDICTED: transcription factor bHLH94 [Glycine max])

HSP 1 Score: 184.9 bits (468), Expect = 1.4e-43
Identity = 105/216 (48.61%), Postives = 138/216 (63.89%), Query Frame = 1

Query: 11  LRATVAPVGKRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQ 70
           + ATV    +R  RR K  K  EEIE QR THIAVERNRRKQMNEYL VLRS+MPSSY Q
Sbjct: 103 VEATVTATSRRKRRRTKSAKNTEEIENQRRTHIAVERNRRKQMNEYLAVLRSLMPSSYVQ 162

Query: 71  RGDQASIVGGTIKLVRELEQLVQWLEGKKQRHE-----------------------HICY 130
           RGDQASI+GG I  V+ELEQL+Q +EG+K+ ++                           
Sbjct: 163 RGDQASIIGGAINFVKELEQLLQSMEGQKRTNQAQENVVGLNGSTTTPFAEFFTFPQYTT 222

Query: 131 AGQDYSGESK------VEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTT 190
            G+  + E K      +EV +++S+AN+K+ ++ +P QL+K+ + L SL L ILH+NV+T
Sbjct: 223 RGRTMAQEQKQWAVADIEVTMVDSHANLKVLSKKQPGQLMKIVVGLQSLMLSILHLNVST 282

Query: 191 IGQMVFYCFSVKIEDGCELSTVGEITAAVNQMFQRI 198
           +  MV Y  SVK+EDGC L+TV EI AAVNQ+ + I
Sbjct: 283 LDDMVLYSISVKVEDGCRLNTVDEIAAAVNQLLRTI 318

BLAST of Cp4.1LG01g09140 vs. NCBI nr
Match: gi|359492901|ref|XP_002285733.2| (PREDICTED: transcription factor bHLH96 [Vitis vinifera])

HSP 1 Score: 183.3 bits (464), Expect = 4.1e-43
Identity = 106/211 (50.24%), Postives = 136/211 (64.45%), Query Frame = 1

Query: 14  TVAPVGKRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGD 73
           + +  G+R  RR K  K +EE+E QRMTHIAVERNRRKQMNEYL VLRS+MP SYTQRGD
Sbjct: 93  STSTTGRRKRRRTKSCKNKEEVENQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYTQRGD 152

Query: 74  QASIVGGTIKLVRELEQLVQWLEGKKQRHEHI----------CYAGQDYS---------- 133
           QASI+GG I  V+ELEQL+Q LE +K   +             +    YS          
Sbjct: 153 QASIIGGAINFVKELEQLLQSLEAEKSSKQQTNNSVSSPFSNFFTFPQYSTRATHCTKDS 212

Query: 134 --GESK-----VEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLILHVNVTTIGQMV 193
             G+++     +EV ++ES+ANIK+ ++ +  QLLK+     SL L ILH+NVTT  QMV
Sbjct: 213 MMGDNRWAVADIEVTMVESHANIKILSKRKTKQLLKIVAGFQSLSLTILHLNVTTFDQMV 272

Query: 194 FYCFSVKIEDGCELSTVGEITAAVNQMFQRI 198
            Y  SVK+E+ C+L+TV EI AAVNQM +RI
Sbjct: 273 LYSLSVKVEEECQLTTVDEIAAAVNQMLRRI 303

BLAST of Cp4.1LG01g09140 vs. NCBI nr
Match: gi|356515760|ref|XP_003526566.1| (PREDICTED: transcription factor bHLH94-like [Glycine max])

HSP 1 Score: 183.0 bits (463), Expect = 5.4e-43
Identity = 106/223 (47.53%), Postives = 142/223 (63.68%), Query Frame = 1

Query: 11  LRATVAPVGKRWGRRGKMVKKREEIEKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQ 70
           + ATV    +R  RR K  K +EEIE QRMTHIAVERNRRKQMNEYL VLRS+MPSSY Q
Sbjct: 106 VEATVTTTSRRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYVQ 165

Query: 71  RGDQASIVGGTIKLVRELEQLVQWLEGKK---QRHEHIC-----------------YAGQ 130
           RGDQASI+GG I  V+ELEQL+Q +EG+K   Q  E++                  +A  
Sbjct: 166 RGDQASIIGGAINFVKELEQLLQSMEGQKRTNQGKENVVGLNGTSRTTTTTPFAEFFAFP 225

Query: 131 DYS----------------GESKVEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLI 190
            Y+                  + +EV +++++AN+K+ ++ +P Q++K+ + L SLKL I
Sbjct: 226 QYTTRGTTMAQNNQEQKQWAVADIEVTMVDNHANLKVLSKKQPGQIMKIVVGLQSLKLSI 285

Query: 191 LHVNVTTIGQMVFYCFSVKIEDGCELSTVGEITAAVNQMFQRI 198
           LH+NV+T+  MV Y  SVK+EDGC L+TV EI AAVNQ+ + I
Sbjct: 286 LHLNVSTLDDMVLYSVSVKVEDGCLLNTVDEIAAAVNQLLRTI 328

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BH094_ARATH2.3e-4146.70Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2 SV=2[more]
BH096_ARATH9.5e-4046.95Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2 SV=1[more]
BH057_ARATH7.8e-3440.19Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2 SV=1[more]
BH067_ARATH1.0e-3342.86Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2 SV=1[more]
BH070_ARATH3.9e-3344.67Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
V7ARK2_PHAVU1.5e-4451.22Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G033800g PE=4 SV=1[more]
A0A0L9UGA8_PHAAN2.0e-4450.00Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g194400 PE=4 SV=1[more]
A0A0S3RD31_PHAAN2.0e-4450.00Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G117000 PE=... [more]
I1JVA4_SOYBN9.9e-4448.61Uncharacterized protein OS=Glycine max GN=GLYMA_04G098400 PE=4 SV=1[more]
E0CRQ8_VITVI2.9e-4350.24Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g06650 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT1G22490.11.3e-4246.70 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G72210.15.3e-4146.95 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G01460.14.4e-3540.19 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G61950.15.7e-3542.86 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G46810.12.2e-3444.67 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
Match NameE-valueIdentityDescription
gi|593268221|ref|XP_007136288.1|2.2e-4451.22hypothetical protein PHAVU_009G033800g [Phaseolus vulgaris][more]
gi|920698521|gb|KOM41746.1|2.9e-4450.00hypothetical protein LR48_Vigan04g194400 [Vigna angularis][more]
gi|356508057|ref|XP_003522778.1|1.4e-4348.61PREDICTED: transcription factor bHLH94 [Glycine max][more]
gi|359492901|ref|XP_002285733.2|4.1e-4350.24PREDICTED: transcription factor bHLH96 [Vitis vinifera][more]
gi|356515760|ref|XP_003526566.1|5.4e-4347.53PREDICTED: transcription factor bHLH94-like [Glycine max][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g09140.1Cp4.1LG01g09140.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 36..93
score: 1.1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 38..89
score: 5.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 43..94
score: 9.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 37..88
score: 14
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 37..103
score: 2.49
NoneNo IPR availablePANTHERPTHR11969MAX DIMERIZATION, MADcoord: 16..197
score: 6.5
NoneNo IPR availablePANTHERPTHR11969:SF19SUBFAMILY NOT NAMEDcoord: 16..197
score: 6.5

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g09140CmaCh04G008440Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g09140CmoCh04G009040Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g09140CsaV3_3G007090Cucumber (Chinese Long) v3cpecucB0491
Cp4.1LG01g09140Bhi11G000717Wax gourdcpewgoB0478
Cp4.1LG01g09140CsGy3G007140Cucumber (Gy14) v2cgybcpeB369
Cp4.1LG01g09140Carg14245Silver-seed gourdcarcpeB1302
The following gene(s) are paralogous to this gene:

None