CmaCh04G008440 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G008440
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Basic helix-loop-helix transcription factor
Location	Cma_Chr04 : 4341379 .. 4342623 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTGGGTTTAGAATCGGCGGTGTTCCAAGAAGATAAGTTGATTGGTTGTGGATGGAAGAATGTGGAAGCAATGGAAGCAGGCGAAGTTGTTGGCGGAGGCTCCAGTGGGTTTGGTATGAATAAAGGATCTTGGTTGGTGGAGGGTGGGGTGGGGAAGCGATGGCGGGGGAGGGGGAAGATGGTGAAGAAGAGGGAGGAGATTGAGAAGCAAAGAATGGTACACATAGCTGTTGAACGCAATAGGAGAAAGCAAATGAATGAGTATCTGTGTGTGCTGAGATCCATGATGCCTTCTTCTTACACCCAAAGGGTAATCTCATCATATCCCATCATGCATTCTTCTTCTTCTTCTTCTTCTTCCATTGCATAATAATGATAAGAAGAGGTTTTAATTTGCAGGGAGATCAGGCGTCAATTGTGGGAGGAACCATCAAGTTCGTGAAGGAGTTAGAACAGCTTGTGCAGTGGTTAGAGGGAAAGAAGCAAAGGCATGAACGCATTTGTTATTCCGGCCAGGATTCAGGGGAATCGAAGGTGGAGGTGAGGGTGATAGAGAGCTACGCCAATATAAAAATGAGGGCGGAGAATCGGCCGAAACAGCTTCTAAAAGTGGCGCTGGAATTGCATTCTCTTCAACTTTTGATTCTTCACGTCAACGTCACTACCATTCGCCAAATGGTTTTTTATTGTTTCAGCGTCAAGGTAAAGAAGAGATATGAGTATTAAAAGCTTTTAGTTTGGCCTCAACCATTACTTTTTTCTAAATTTAACTTGGGACAGCATTGAATTTAAAATAATTTTGGTAATAGTTGATTCACTTATTTGAATATGGCAGATCGGAGATGAATGTGAACTGAACACTGTGGGTGAGATTACTGCAGCTGTGAATCAAATGTTCCAACGGATCCTTATGGAAAAGGGTGACTAGTTTCAATGCCAATACATAATTTTAATGTTATAGCCTTTTTATTTTTCTAAGTTTTAATCTCATTAATGTCCGTTCCGTTTTGCAACGTTCTAATCATGATTTCCAATATTAAGTGTTATTTTTATTTTTAATTTTACTATATTCTTTTTGATTTTATCTTATTTAGATATTAAAAAATATTTATTTTTAGTTTAACTCTATTAGTGGAAGATGTCACGATAAGTTTTTTTATTTTTATTTTTATGAGGATTGGATATATATATATATATATAGATATATATATATATAAAAGGGGAAGGAGGTAGAAGAAAA

mRNA sequence

ATGGTGTTGGGTTTAGAATCGGCGGTGTTCCAAGAAGATAAGTTGATTGGTTGTGGATGGAAGAATGTGGAAGCAATGGAAGCAGGCGAAGTTGTTGGCGGAGGCTCCAGTGGGTTTGGTATGAATAAAGGATCTTGGTTGGTGGAGGGTGGGGTGGGGAAGCGATGGCGGGGGAGGGGGAAGATGGTGAAGAAGAGGGAGGAGATTGAGAAGCAAAGAATGGTACACATAGCTGTTGAACGCAATAGGAGAAAGCAAATGAATGAGTATCTGTGTGTGCTGAGATCCATGATGCCTTCTTCTTACACCCAAAGGGGAGATCAGGCGTCAATTGTGGGAGGAACCATCAAGTTCGTGAAGGAGTTAGAACAGCTTGTGCAGTGGTTAGAGGGAAAGAAGCAAAGGCATGAACGCATTTGTTATTCCGGCCAGGATTCAGGGGAATCGAAGGTGGAGGTGAGGGTGATAGAGAGCTACGCCAATATAAAAATGAGGGCGGAGAATCGGCCGAAACAGCTTCTAAAAGTGGCGCTGGAATTGCATTCTCTTCAACTTTTGATTCTTCACGTCAACGTCACTACCATTCGCCAAATGGTTTTTTATTGTTTCAGCGTCAAGATCGGAGATGAATGTGAACTGAACACTGTGGGTGAGATTACTGCAGCTGTGAATCAAATGTTCCAACGGATCCTTATGGAAAAGGGTGACTAGTTTCAATGCCAATACATAATTTTAATGTTATAGCCTTTTTATTTTTCTAAGTTTTAATCTCATTAATGTCCGTTCCGTTTTGCAACGTTCTAATCATGATTTCCAATATTAAGTGTTATTTTTATTTTTAATTTTACTATATTCTTTTTGATTTTATCTTATTTAGATATTAAAAAATATTTATTTTTAGTTTAACTCTATTAGTGGAAGATGTCACGATAAGTTTTTTTATTTTTATTTTTATGAGGATTGGATATATATATATATATATAGATATATATATATATAAAAGGGGAAGGAGGTAGAAGAAAA

Coding sequence (CDS)

ATGGTGTTGGGTTTAGAATCGGCGGTGTTCCAAGAAGATAAGTTGATTGGTTGTGGATGGAAGAATGTGGAAGCAATGGAAGCAGGCGAAGTTGTTGGCGGAGGCTCCAGTGGGTTTGGTATGAATAAAGGATCTTGGTTGGTGGAGGGTGGGGTGGGGAAGCGATGGCGGGGGAGGGGGAAGATGGTGAAGAAGAGGGAGGAGATTGAGAAGCAAAGAATGGTACACATAGCTGTTGAACGCAATAGGAGAAAGCAAATGAATGAGTATCTGTGTGTGCTGAGATCCATGATGCCTTCTTCTTACACCCAAAGGGGAGATCAGGCGTCAATTGTGGGAGGAACCATCAAGTTCGTGAAGGAGTTAGAACAGCTTGTGCAGTGGTTAGAGGGAAAGAAGCAAAGGCATGAACGCATTTGTTATTCCGGCCAGGATTCAGGGGAATCGAAGGTGGAGGTGAGGGTGATAGAGAGCTACGCCAATATAAAAATGAGGGCGGAGAATCGGCCGAAACAGCTTCTAAAAGTGGCGCTGGAATTGCATTCTCTTCAACTTTTGATTCTTCACGTCAACGTCACTACCATTCGCCAAATGGTTTTTTATTGTTTCAGCGTCAAGATCGGAGATGAATGTGAACTGAACACTGTGGGTGAGATTACTGCAGCTGTGAATCAAATGTTCCAACGGATCCTTATGGAAAAGGGTGACTAG

Protein sequence

MVLGLESAVFQEDKLIGCGWKNVEAMEAGEVVGGGSSGFGMNKGSWLVEGGVGKRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWLEGKKQRHERICYSGQDSGESKVEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSVKIGDECELNTVGEITAAVNQMFQRILMEKGD

Homology

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BLAST of CmaCh04G008440 vs. Swiss-Prot
Match: BH096_ARATH (Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.6e-38
Identity = 97/215 (45.12%), Postives = 129/215 (60.00%), Query Frame = 1


Query: 48  VEGGVGKRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGD 107
           V  G G+R R R +  K +EEIE QRM HIAVERNRRKQMNEYL VLRS+MP  Y QRGD
Sbjct: 99  VAAGGGRRKRRRTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGD 158

Query: 108 QASIVGGTIKFVKELEQLVQWLEGKKQRHERICYSGQD---------------------- 167
           QASIVGG I ++KELE  +Q +E   +       +G D                      
Sbjct: 159 QASIVGGAINYLKELEHHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQY 218

Query: 168 ----------SGESKVEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTI 227
                      G +++EV ++ES+A++K+ A+ RP+QLLK+   + SL+L +LH+NVTT 
Sbjct: 219 SNRPTSAAAAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTR 278

Query: 228 RQMVFYCFSVKIGDECELNTVGEITAAVNQMFQRI 231
              V Y  SVK+ +  +LNTV +I AAVNQ+ +RI
Sbjct: 279 DDSVLYSISVKVEEGSQLNTVEDIAAAVNQILRRI 313

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BLAST of CmaCh04G008440 vs. Swiss-Prot
Match: BH094_ARATH (Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2 SV=2)

HSP 1 Score: 156.4 bits (394), Expect = 3.9e-37
Identity = 96/209 (45.93%), Postives = 126/209 (60.29%), Query Frame = 1


Query: 54  KRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 113
           +R R R +  K +EEIE QRM HIAVERNRRKQMNEYL VLRS+MPSSY QRGDQASIVG
Sbjct: 95  RRKRRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVG 154

Query: 114 GTIKFVKELEQ----------LVQWLEGKKQRHERIC-----------YSGQDSGE---- 173
           G I +VKELE                +G K     +            YS + S +    
Sbjct: 155 GAINYVKELEHILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPES 214

Query: 174 ----SKVEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFS 233
               +++EV V ES+ANIK+  + +P+QLLK+   L SL+L +LH+NVTT+   + Y  S
Sbjct: 215 SSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSIS 274

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BLAST of CmaCh04G008440 vs. Swiss-Prot
Match: BH070_ARATH (Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-33
Identity = 89/197 (45.18%), Postives = 118/197 (59.90%), Query Frame = 1


Query: 54  KRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 113
           KR R R K  K  EEIE QRM HIAVERNRR+QMN +L  LRS++PSSY QRGDQASIVG
Sbjct: 173 KRKRRRTKPTKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVG 232

Query: 114 GTIKFVKELEQLVQWLEGKKQRHE----------------------RICYSGQDSGESKV 173
           G I FVK LEQ +Q LE +K+  +                      R     + S + K+
Sbjct: 233 GAIDFVKILEQQLQSLEAQKRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKI 292

Query: 174 EVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTT-IRQMVFYCFSVKIGDE 228
           E  VIES+ N+K++   +  QLL+  + L  L+  +LH+N+T+     V Y F++K+ DE
Sbjct: 293 EATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDE 352

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BLAST of CmaCh04G008440 vs. Swiss-Prot
Match: BH067_ARATH (Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.4e-33
Identity = 86/196 (43.88%), Postives = 124/196 (63.27%), Query Frame = 1


Query: 54  KRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 113
           KR R + K  K  EEIE QR+ HIAVERNRR+QMNE++  LR+++P SY QRGDQASIVG
Sbjct: 158 KRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVG 217

Query: 114 GTIKFVKELEQLVQWLEGKKQRHERI----------CYSGQDSGE-----------SKVE 173
           G I +VK LEQ++Q LE +K+  ++             SG  S +            K+E
Sbjct: 218 GAINYVKVLEQIIQSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIE 277

Query: 174 VRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTT-IRQMVFYCFSVKIGDEC 228
             VI+++ ++K++ E +  QLLK  + L  L+L +LH+N+TT     V Y F++K+ DEC
Sbjct: 278 ATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDEC 337

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BLAST of CmaCh04G008440 vs. Swiss-Prot
Match: BH057_ARATH (Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.0e-32
Identity = 84/209 (40.19%), Postives = 124/209 (59.33%), Query Frame = 1


Query: 54  KRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 113
           KR R R +  K ++E+E QRM HIAVERNRR+QMNE+L  LRS+MP S+ QRGDQASIVG
Sbjct: 95  KRKRKRTRAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVG 154

Query: 114 GTIKFVKELEQLVQWLEGKKQR---------------HERICYSGQDSGES--------- 173
           G I F+KELEQL+Q LE +K++                   C +   S  S         
Sbjct: 155 GAIDFIKELEQLLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTA 214

Query: 174 --------KVEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFY 231
                   +VE  VI+++ ++K+R +   +Q+LK  + +  L+L ILH+ +++    V Y
Sbjct: 215 RFGGGDTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIY 274

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BLAST of CmaCh04G008440 vs. TrEMBL
Match: E0CRQ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g06650 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.9e-44
Identity = 110/206 (53.40%), Postives = 136/206 (66.02%), Query Frame = 1


Query: 53  GKRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIV 112
           G+R R R K  K +EE+E QRM HIAVERNRRKQMNEYL VLRS+MP SYTQRGDQASI+
Sbjct: 98  GRRKRRRTKSCKNKEEVENQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYTQRGDQASII 157

Query: 113 GGTIKFVKELEQLVQWLEGKK---------------------QRHERICYSGQDS--GES 172
           GG I FVKELEQL+Q LE +K                     Q   R  +  +DS  G++
Sbjct: 158 GGAINFVKELEQLLQSLEAEKSSKQQTNNSVSSPFSNFFTFPQYSTRATHCTKDSMMGDN 217

Query: 173 K-----VEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFS 231
           +     +EV ++ES+ANIK+ ++ + KQLLK+     SL L ILH+NVTT  QMV Y  S
Sbjct: 218 RWAVADIEVTMVESHANIKILSKRKTKQLLKIVAGFQSLSLTILHLNVTTFDQMVLYSLS 277

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BLAST of CmaCh04G008440 vs. TrEMBL
Match: M0SZG9_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 8.8e-44
Identity = 118/268 (44.03%), Postives = 159/268 (59.33%), Query Frame = 1


Query: 3   LGLESAVFQEDKLIGCGWKNVEAMEAGEVVG-------GGSSG--------FGMNKGSWL 62
           + L++ VFQ+D L GC  + +  ++ GE+ G        G+ G         G +  S +
Sbjct: 1   MALQAVVFQQD-LFGCNMREMH-IKGGEIRGVLSQCDVSGAQGGRNLSLPEMGTDSASVV 60

Query: 63  VEG-GVGKRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRG 122
             G   G+R R R +  K +EE+E QRM HIAVERNRRKQMN+YL VLRS++P+SY  RG
Sbjct: 61  CTGTAAGRRKRRRTRSCKNQEEVENQRMTHIAVERNRRKQMNQYLAVLRSLIPASYLHRG 120

Query: 123 DQASIVGGTIKFVKELEQLVQWLEGKKQRHERI---------------------CYSGQD 182
           DQAS++GG I FVKELEQLVQ LE +K+  +R                        + Q 
Sbjct: 121 DQASVIGGAINFVKELEQLVQSLEARKRIKQRSNSAPFANFFTFPQYSTRNADEAAAEQQ 180

Query: 183 SGESKVEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSV 234
           S  + +EV ++ES+AN+K+ A+ RPKQLLK+ + LH L L  LH+NVTTI  MV Y FS+
Sbjct: 181 SPVADIEVTMVESHANLKVLAQRRPKQLLKMVVGLHLLHLTTLHLNVTTIDAMVLYSFSL 240

[Close]

BLAST of CmaCh04G008440 vs. TrEMBL
Match: V7ARK2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G033800g PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.7e-43
Identity = 103/198 (52.02%), Postives = 132/198 (66.67%), Query Frame = 1


Query: 54  KRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 113
           +R R R K  K +EEIE QR  HIAVERNRRKQMNEYL VLRS+MPSSY QRGDQASI+G
Sbjct: 102 RRKRRRTKSEKNKEEIENQRTTHIAVERNRRKQMNEYLAVLRSLMPSSYVQRGDQASIIG 161

Query: 114 GTIKFVKELEQLVQWLEGKKQRHE---------------RICYSGQDSGESK------VE 173
           G I FVKELEQ++Q +EG+K+R +               +    G    E K      +E
Sbjct: 162 GAINFVKELEQVLQSMEGEKRRKQGEENVGAFAEFFTFPQYTTRGTQKQEQKEWAVADIE 221

Query: 174 VRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSVKIGDECE 231
           V +++S+AN+K+ ++ +P  L+K+ L L SL+L ILH+NVTT+  MV Y  SVK+ + CE
Sbjct: 222 VTMVDSHANLKILSKKQPSHLMKIVLGLQSLRLTILHLNVTTLHHMVLYSISVKVEEGCE 281

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BLAST of CmaCh04G008440 vs. TrEMBL
Match: A0A0S3RD31_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G117000 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.7e-42
Identity = 104/205 (50.73%), Postives = 134/205 (65.37%), Query Frame = 1


Query: 54  KRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 113
           +R R R K  K +EEIE QRM HIAVERNRRKQMNEYL VLRS+MPSSY QRGDQASI+G
Sbjct: 105 RRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYVQRGDQASIIG 164

Query: 114 GTIKFVKELEQLVQWLEGKKQ----RHERICYSGQDS--------------GESK----- 173
           G I FVKELEQ++Q +EG+K+      E +  +G  +              G  K     
Sbjct: 165 GAINFVKELEQVLQSMEGEKRRKQGEEENVGLNGWTTPFAEFFTFPQYTTRGNQKQEQKQ 224

Query: 174 -----VEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSV 231
                +EV +++S+AN+K+ A+ +P  L+K+ L L +L+L ILH+NVTT+  MV Y  SV
Sbjct: 225 WAVADIEVTMVDSHANLKILAKKQPSHLMKIVLGLQTLRLTILHLNVTTLHHMVLYSISV 284

[Close]

BLAST of CmaCh04G008440 vs. TrEMBL
Match: A0A0L9UGA8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g194400 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.7e-42
Identity = 104/205 (50.73%), Postives = 134/205 (65.37%), Query Frame = 1


Query: 54  KRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 113
           +R R R K  K +EEIE QRM HIAVERNRRKQMNEYL VLRS+MPSSY QRGDQASI+G
Sbjct: 105 RRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYVQRGDQASIIG 164

Query: 114 GTIKFVKELEQLVQWLEGKKQ----RHERICYSGQDS--------------GESK----- 173
           G I FVKELEQ++Q +EG+K+      E +  +G  +              G  K     
Sbjct: 165 GAINFVKELEQVLQSMEGEKRRKQGEEENVGLNGWTTPFAEFFTFPQYTTRGNQKQEQKQ 224

Query: 174 -----VEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSV 231
                +EV +++S+AN+K+ A+ +P  L+K+ L L +L+L ILH+NVTT+  MV Y  SV
Sbjct: 225 WAVADIEVTMVDSHANLKILAKKQPSHLMKIVLGLQTLRLTILHLNVTTLHHMVLYSISV 284

[Close]

BLAST of CmaCh04G008440 vs. TAIR10
Match: AT1G72210.1 (AT1G72210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 161.0 bits (406), Expect = 9.0e-40
Identity = 97/215 (45.12%), Postives = 129/215 (60.00%), Query Frame = 1


Query: 48  VEGGVGKRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGD 107
           V  G G+R R R +  K +EEIE QRM HIAVERNRRKQMNEYL VLRS+MP  Y QRGD
Sbjct: 99  VAAGGGRRKRRRTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGD 158

Query: 108 QASIVGGTIKFVKELEQLVQWLEGKKQRHERICYSGQD---------------------- 167
           QASIVGG I ++KELE  +Q +E   +       +G D                      
Sbjct: 159 QASIVGGAINYLKELEHHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQY 218

Query: 168 ----------SGESKVEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTI 227
                      G +++EV ++ES+A++K+ A+ RP+QLLK+   + SL+L +LH+NVTT 
Sbjct: 219 SNRPTSAAAAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTR 278

Query: 228 RQMVFYCFSVKIGDECELNTVGEITAAVNQMFQRI 231
              V Y  SVK+ +  +LNTV +I AAVNQ+ +RI
Sbjct: 279 DDSVLYSISVKVEEGSQLNTVEDIAAAVNQILRRI 313

[Close]

BLAST of CmaCh04G008440 vs. TAIR10
Match: AT1G22490.1 (AT1G22490.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 156.4 bits (394), Expect = 2.2e-38
Identity = 96/209 (45.93%), Postives = 126/209 (60.29%), Query Frame = 1


Query: 54  KRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 113
           +R R R +  K +EEIE QRM HIAVERNRRKQMNEYL VLRS+MPSSY QRGDQASIVG
Sbjct: 95  RRKRRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVG 154

Query: 114 GTIKFVKELEQ----------LVQWLEGKKQRHERIC-----------YSGQDSGE---- 173
           G I +VKELE                +G K     +            YS + S +    
Sbjct: 155 GAINYVKELEHILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPES 214

Query: 174 ----SKVEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFS 233
               +++EV V ES+ANIK+  + +P+QLLK+   L SL+L +LH+NVTT+   + Y  S
Sbjct: 215 SSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSIS 274

[Close]

BLAST of CmaCh04G008440 vs. TAIR10
Match: AT2G46810.1 (AT2G46810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 144.8 bits (364), Expect = 6.7e-35
Identity = 89/197 (45.18%), Postives = 118/197 (59.90%), Query Frame = 1


Query: 54  KRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 113
           KR R R K  K  EEIE QRM HIAVERNRR+QMN +L  LRS++PSSY QRGDQASIVG
Sbjct: 173 KRKRRRTKPTKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVG 232

Query: 114 GTIKFVKELEQLVQWLEGKKQRHE----------------------RICYSGQDSGESKV 173
           G I FVK LEQ +Q LE +K+  +                      R     + S + K+
Sbjct: 233 GAIDFVKILEQQLQSLEAQKRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKI 292

Query: 174 EVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTT-IRQMVFYCFSVKIGDE 228
           E  VIES+ N+K++   +  QLL+  + L  L+  +LH+N+T+     V Y F++K+ DE
Sbjct: 293 EATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDE 352

[Close]

BLAST of CmaCh04G008440 vs. TAIR10
Match: AT3G61950.1 (AT3G61950.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 143.3 bits (360), Expect = 1.9e-34
Identity = 86/196 (43.88%), Postives = 124/196 (63.27%), Query Frame = 1


Query: 54  KRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 113
           KR R + K  K  EEIE QR+ HIAVERNRR+QMNE++  LR+++P SY QRGDQASIVG
Sbjct: 158 KRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVG 217

Query: 114 GTIKFVKELEQLVQWLEGKKQRHERI----------CYSGQDSGE-----------SKVE 173
           G I +VK LEQ++Q LE +K+  ++             SG  S +            K+E
Sbjct: 218 GAINYVKVLEQIIQSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIE 277

Query: 174 VRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTT-IRQMVFYCFSVKIGDEC 228
             VI+++ ++K++ E +  QLLK  + L  L+L +LH+N+TT     V Y F++K+ DEC
Sbjct: 278 ATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDEC 337

[Close]

BLAST of CmaCh04G008440 vs. TAIR10
Match: AT4G01460.1 (AT4G01460.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 141.7 bits (356), Expect = 5.6e-34
Identity = 84/209 (40.19%), Postives = 124/209 (59.33%), Query Frame = 1


Query: 54  KRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 113
           KR R R +  K ++E+E QRM HIAVERNRR+QMNE+L  LRS+MP S+ QRGDQASIVG
Sbjct: 95  KRKRKRTRAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVG 154

Query: 114 GTIKFVKELEQLVQWLEGKKQR---------------HERICYSGQDSGES--------- 173
           G I F+KELEQL+Q LE +K++                   C +   S  S         
Sbjct: 155 GAIDFIKELEQLLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTA 214

Query: 174 --------KVEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFY 231
                   +VE  VI+++ ++K+R +   +Q+LK  + +  L+L ILH+ +++    V Y
Sbjct: 215 RFGGGDTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIY 274

[Close]

BLAST of CmaCh04G008440 vs. NCBI nr
Match: gi|359492901|ref|XP_002285733.2| (PREDICTED: transcription factor bHLH96 [Vitis vinifera])

HSP 1 Score: 186.4 bits (472), Expect = 5.7e-44
Identity = 110/206 (53.40%), Postives = 136/206 (66.02%), Query Frame = 1


Query: 53  GKRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIV 112
           G+R R R K  K +EE+E QRM HIAVERNRRKQMNEYL VLRS+MP SYTQRGDQASI+
Sbjct: 98  GRRKRRRTKSCKNKEEVENQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYTQRGDQASII 157

Query: 113 GGTIKFVKELEQLVQWLEGKK---------------------QRHERICYSGQDS--GES 172
           GG I FVKELEQL+Q LE +K                     Q   R  +  +DS  G++
Sbjct: 158 GGAINFVKELEQLLQSLEAEKSSKQQTNNSVSSPFSNFFTFPQYSTRATHCTKDSMMGDN 217

Query: 173 K-----VEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFS 231
           +     +EV ++ES+ANIK+ ++ + KQLLK+     SL L ILH+NVTT  QMV Y  S
Sbjct: 218 RWAVADIEVTMVESHANIKILSKRKTKQLLKIVAGFQSLSLTILHLNVTTFDQMVLYSLS 277

[Close]

BLAST of CmaCh04G008440 vs. NCBI nr
Match: gi|695027750|ref|XP_009401227.1| (PREDICTED: transcription factor bHLH94-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43
Identity = 118/268 (44.03%), Postives = 159/268 (59.33%), Query Frame = 1


Query: 3   LGLESAVFQEDKLIGCGWKNVEAMEAGEVVG-------GGSSG--------FGMNKGSWL 62
           + L++ VFQ+D L GC  + +  ++ GE+ G        G+ G         G +  S +
Sbjct: 1   MALQAVVFQQD-LFGCNMREMH-IKGGEIRGVLSQCDVSGAQGGRNLSLPEMGTDSASVV 60

Query: 63  VEG-GVGKRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRG 122
             G   G+R R R +  K +EE+E QRM HIAVERNRRKQMN+YL VLRS++P+SY  RG
Sbjct: 61  CTGTAAGRRKRRRTRSCKNQEEVENQRMTHIAVERNRRKQMNQYLAVLRSLIPASYLHRG 120

Query: 123 DQASIVGGTIKFVKELEQLVQWLEGKKQRHERI---------------------CYSGQD 182
           DQAS++GG I FVKELEQLVQ LE +K+  +R                        + Q 
Sbjct: 121 DQASVIGGAINFVKELEQLVQSLEARKRIKQRSNSAPFANFFTFPQYSTRNADEAAAEQQ 180

Query: 183 SGESKVEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSV 234
           S  + +EV ++ES+AN+K+ A+ RPKQLLK+ + LH L L  LH+NVTTI  MV Y FS+
Sbjct: 181 SPVADIEVTMVESHANLKVLAQRRPKQLLKMVVGLHLLHLTTLHLNVTTIDAMVLYSFSL 240

[Close]

BLAST of CmaCh04G008440 vs. NCBI nr
Match: gi|593268221|ref|XP_007136288.1| (hypothetical protein PHAVU_009G033800g [Phaseolus vulgaris])

HSP 1 Score: 181.8 bits (460), Expect = 1.4e-42
Identity = 103/198 (52.02%), Postives = 132/198 (66.67%), Query Frame = 1


Query: 54  KRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 113
           +R R R K  K +EEIE QR  HIAVERNRRKQMNEYL VLRS+MPSSY QRGDQASI+G
Sbjct: 102 RRKRRRTKSEKNKEEIENQRTTHIAVERNRRKQMNEYLAVLRSLMPSSYVQRGDQASIIG 161

Query: 114 GTIKFVKELEQLVQWLEGKKQRHE---------------RICYSGQDSGESK------VE 173
           G I FVKELEQ++Q +EG+K+R +               +    G    E K      +E
Sbjct: 162 GAINFVKELEQVLQSMEGEKRRKQGEENVGAFAEFFTFPQYTTRGTQKQEQKEWAVADIE 221

Query: 174 VRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSVKIGDECE 231
           V +++S+AN+K+ ++ +P  L+K+ L L SL+L ILH+NVTT+  MV Y  SVK+ + CE
Sbjct: 222 VTMVDSHANLKILSKKQPSHLMKIVLGLQSLRLTILHLNVTTLHHMVLYSISVKVEEGCE 281

[Close]

BLAST of CmaCh04G008440 vs. NCBI nr
Match: gi|920698521|gb|KOM41746.1| (hypothetical protein LR48_Vigan04g194400 [Vigna angularis])

HSP 1 Score: 179.9 bits (455), Expect = 5.3e-42
Identity = 104/205 (50.73%), Postives = 134/205 (65.37%), Query Frame = 1


Query: 54  KRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 113
           +R R R K  K +EEIE QRM HIAVERNRRKQMNEYL VLRS+MPSSY QRGDQASI+G
Sbjct: 105 RRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYVQRGDQASIIG 164

Query: 114 GTIKFVKELEQLVQWLEGKKQ----RHERICYSGQDS--------------GESK----- 173
           G I FVKELEQ++Q +EG+K+      E +  +G  +              G  K     
Sbjct: 165 GAINFVKELEQVLQSMEGEKRRKQGEEENVGLNGWTTPFAEFFTFPQYTTRGNQKQEQKQ 224

Query: 174 -----VEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSV 231
                +EV +++S+AN+K+ A+ +P  L+K+ L L +L+L ILH+NVTT+  MV Y  SV
Sbjct: 225 WAVADIEVTMVDSHANLKILAKKQPSHLMKIVLGLQTLRLTILHLNVTTLHHMVLYSISV 284

[Close]

BLAST of CmaCh04G008440 vs. NCBI nr
Match: gi|590706867|ref|XP_007047843.1| (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 179.9 bits (455), Expect = 5.3e-42
Identity = 106/217 (48.85%), Postives = 133/217 (61.29%), Query Frame = 1


Query: 54  KRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 113
           +R R R K VK +EEIE QRM HIAVERNRR+QMN+YL VL+SMMP+SY QRGDQASI+G
Sbjct: 133 RRKRRRTKSVKNKEEIENQRMTHIAVERNRRRQMNDYLAVLKSMMPTSYVQRGDQASIIG 192

Query: 114 GTIKFVKELEQLVQWLEGKKQRHERI---------------------------CYSGQDS 173
           G I FVKELEQL+Q LE +K+  +R                             Y+   S
Sbjct: 193 GAINFVKELEQLLQSLEARKRMEKRSDNSTLSSLFSDFFSFPQYSTGSTSTHRSYAAATS 252

Query: 174 GES----------KVEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIR 233
            +S           VEV ++ES+AN+K+ ++  PKQLLK+   LHSL L +LH+NVT++ 
Sbjct: 253 SQSMAEKRSSSVADVEVTMVESHANLKILSKRHPKQLLKMVAGLHSLGLCVLHLNVTSVE 312

The following BLAST results are available for this feature:

BLAST of CmaCh04G008440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH096_ARATH	1.6e-38	45.12	Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2 SV=1	[more]
BH094_ARATH	3.9e-37	45.93	Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2 SV=2	[more]
BH070_ARATH	1.2e-33	45.18	Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2 SV=1	[more]
BH067_ARATH	3.4e-33	43.88	Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2 SV=1	[more]
BH057_ARATH	1.0e-32	40.19	Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2 SV=1	[more]

BLAST of CmaCh04G008440 vs. TrEMBL


Match Name	E-value	Identity	Description
E0CRQ8_VITVI	3.9e-44	53.40	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g06650 PE=4 SV=...	[more]
M0SZG9_MUSAM	8.8e-44	44.03	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
V7ARK2_PHAVU	9.7e-43	52.02	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G033800g PE=4 SV=1	[more]
A0A0S3RD31_PHAAN	3.7e-42	50.73	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G117000 PE=...	[more]
A0A0L9UGA8_PHAAN	3.7e-42	50.73	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g194400 PE=4 SV=1	[more]

BLAST of CmaCh04G008440 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G72210.1	9.0e-40	45.12	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G22490.1	2.2e-38	45.93	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G46810.1	6.7e-35	45.18	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G61950.1	1.9e-34	43.88	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G01460.1	5.6e-34	40.19	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of CmaCh04G008440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|359492901\|ref\|XP_002285733.2\|	5.7e-44	53.40	PREDICTED: transcription factor bHLH96 [Vitis vinifera]	[more]
gi\|695027750\|ref\|XP_009401227.1\|	1.3e-43	44.03	PREDICTED: transcription factor bHLH94-like [Musa acuminata subsp. malaccensis]	[more]
gi\|593268221\|ref\|XP_007136288.1\|	1.4e-42	52.02	hypothetical protein PHAVU_009G033800g [Phaseolus vulgaris]	[more]
gi\|920698521\|gb\|KOM41746.1\|	5.3e-42	50.73	hypothetical protein LR48_Vigan04g194400 [Vigna angularis]	[more]
gi\|590706867\|ref\|XP_007047843.1\|	5.3e-42	48.85	Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1 [Theo...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G008440.1	CmaCh04G008440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 70..127 score: 1.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 72..123 score: 7.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 77..128 score: 8.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 71..122 score: 14
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 71..137 score: 9.42
None	No IPR available	unknown	Coil	Coil	coord: 119..139 scor
None	No IPR available	PANTHER	PTHR11969	MAX DIMERIZATION, MAD	coord: 53..230 score: 9.2
None	No IPR available	PANTHER	PTHR11969:SF22	TRANSCRIPTION FACTOR BHLH71-RELATED	coord: 53..230 score: 9.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G008440	CmoCh04G009040	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G008440	Cp4.1LG01g09140	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G008440	CsaV3_3G007090	Cucumber (Chinese Long) v3	cmacucB0837
CmaCh04G008440	Bhi11G000717	Wax gourd	cmawgoB0815
CmaCh04G008440	CsGy3G007140	Cucumber (Gy14) v2	cgybcmaB416
CmaCh04G008440	Carg14245	Silver-seed gourd	carcmaB1288

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G008440	Watermelon (Charleston Gray)	cmawcgB614
CmaCh04G008440	Watermelon (Charleston Gray)	cmawcgB639
CmaCh04G008440	Cucurbita pepo (Zucchini)	cmacpeB714
CmaCh04G008440	Cucurbita pepo (Zucchini)	cmacpeB702
CmaCh04G008440	Cucurbita pepo (Zucchini)	cmacpeB741
CmaCh04G008440	Bottle gourd (USVL1VR-Ls)	cmalsiB639
CmaCh04G008440	Bottle gourd (USVL1VR-Ls)	cmalsiB692
CmaCh04G008440	Melon (DHL92) v3.6.1	cmamedB804
CmaCh04G008440	Silver-seed gourd	carcmaB1414
CmaCh04G008440	Watermelon (97103) v2	cmawmbB718
CmaCh04G008440	Wax gourd	cmawgoB0822
CmaCh04G008440	Cucurbita maxima (Rimu)	cmacmaB350
CmaCh04G008440	Cucurbita maxima (Rimu)	cmacmaB546
CmaCh04G008440	Cucurbita moschata (Rifu)	cmacmoB700
CmaCh04G008440	Cucurbita moschata (Rifu)	cmacmoB727
CmaCh04G008440	Melon (DHL92) v3.5.1	cmameB710