Cp4.1LG01g06700 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g06700
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc finger, B-box
LocationCp4.1LG01 : 4064921 .. 4067724 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGGAAGAAAAAAAAACAAAGAACACAGAGAGAATAGAGAGCACGGCTCTTGGAGTGCGATTGGACCGAGAAAAGCGCGATGGATCTGAACCACAAATAACAATTGTTGAAGAAGACGCGGGCAGTGGCACCACGTGCAAAGAGAAGAGGGTAATCTAACAACGAAACCCCATCTCCACCATCCATTCCCATTCATCCATCCATTTGCATCCAATCTCCACACACCCAGTGCATGTTGTGGCAATATAAACAAACAAAAAAGCTTGGGACCCGCGTTAGATATGTAACTGGTGGATGAGAATAATCGGAGAACGCCATTCATTTCTCCACTCTCCTCCCTTTCCTCTTACAAAACTTGTGGCCATCCATTTCGCTCCCTCTTTCAAGTGCTAATTTGACAAAAAAGATCTTCCGTTTTTCCCTCTCTTCATTGCCTTCCATGTGCTCTTCTTCCTATTTATTATTGTTTCCCTTAGCCCAATTGTCTTCTCGAATCTTCTTTTACCCCCCCCAGGCCCCGCTAATCCAACCCCATTTCTCAATTTTCTCTGTTTCGATCCTCTTTGCTTTTATTTCCCTTTCTCTCTCTCTCTCTCTTCCTAGTCATTTCCCACCATCGTTTTCGTTGTCAAACGTCAAGCCCATCTTTAATGGAGCTATAATTTGGTCTAGGAAACGTCAGGAACTTGTTGTTCTTGTTCTTATTGGTTTCTGATTTGTGGGGGTTTGGTTTATTTGGGGCAGTTGTTTTTGGGTTTGTTTTCGTTTTCTTTTTCATCGTGTTTGTGGATGAGGACGGGGATATGAAGGCGTTGCTGTTGTAGTTTTAGTGTGGTTGATTTTGTTGGGGAGAGGAAATGAGAGTGGGGAGCTTCAATTATGAGAACACTTTGTGACTCTTGTGAAAGCGCTGCCGCTATCGTCTTTTGTGCTGCTGACGAAGCCGCCCTTTGCCGCTCTTGTGATGAGAAGGTATTCCTCTTCGTTTCTTTCTTCTTTCTTTTGTTTGCCTTATTTGATTATTGCCCATATGGGTTGATTTTGCGTTATGTTGACTGTGACCACTTCACTTCTGCAATGAGAATCTGGTGGATTGATAATTGAATCATGGATTATTGGCCCTTATAAATTCTGGGTTGTCCTTAGATATGTGTCTGCATTTGATAATTGTATTGCTGGTGGATCTTGTACTTGATCAGAGGAATCTCTTCCTGTGGCTGTTAGGTGACTTTGGAGGAAGGCTTTTGTTGCTGTCAATTCAGCAAGAAATATGCTTCTGCATTGCCTTGGATCTCTCTCAGCAATCTATCTTTAAAGGACAAATTCTCATGTTGACTGACACAGAAACATGATCACTCATTGAATTTATATAAAACAAGTGCCTGATGGTTCTGTTGGATATATAACATCAGGATTTGTCTGCTTGGATGATAATTTGACTGATCTTTGACCACTTGGTTTTGATGTCCGGACCTCCTGTCGCGTGGTTGTCTGTGAGATCCTACATCGGTTGGAGAGGAAAACGAAGCATTCTTTATAAGGGTGTAGAAACCTCTCTCTAGTACTCGTTTTAAAACCTTGAGCGGAAGCCCATAAAGGAAAGCCCAATCTGCTATTGGTGGGTTTGAGCTGATTACAAATGGTATCGGAGTCAGTCATCGGAGGTGTGCTGGCGAGGACCCTCGCCCCCAAAGTGTGGATTGTGAGATCGCACATCAGTTGGAGAGGGGAATGAAGCATTTTGTGGAAACTCTCCCTAGTAGATGTGTTTTAAAACTTGAGGGGAATGAGAAAGCCCAAAGAGAACAATGTCGCGTAGTGGTGGGTCTAGGCTGTTACACTGTCATTCAAGTGTAGCTCTGGAGTTTATCGATTCCCTTTTCAAGGATAATAGATTGATATTTGATGTGACTTTATATTATTCTCACTCAGTTTTGTGCCATCAAATTCTTTCCTGCTTGCTGCTGTCCTAGAAGTTGTGTTTGTTTCATATAAAAAAAAAAAAAACTTAAAACTGAAGCTGAAATCTTAATAAATATGTTGTAAACTTGTTATGAAAGGTCCATCTGTGCAATAAACTCGCAAGTCGACATGTAAGAGTTGGCCTTGCAAGTCCCAGTGATGTCCCCCGCTGCGATATATGCGAGAATGCACCTGGTATGGACGTTTTTCCTTCTGTTTTTCGTACTTGTTAGCTTTGTTATGTACCACGATTCGGGACAGTCTAGTTAACTTAGATGTATTTATTTTTTGGCCTTGGAAATTGCTTGCAGCTTTCTTTTACTGTGAGATAGATGGAAGTTCCCTTTGTTTGCAATGTGACATGGTCGTTCATGTTGGAGGGAAAAGGACACATAAGAGATACCTTTTGCTAAGGCAGAGGTTTGAGGTTGGTCGATAGATTGCGATACGACCTTGTGTGTTTTCCAGCTACATAAGAATTGGAACTTTGAACTTGTTTCTTTTTCAGTTTCCAGGAGATAAACCTATAAACCTTGATGCGCCGTCTCCACATTCCAAGGTTCCCAATAATATTGGTAGAGGGCATAACCAGACACTGCCCCATAAAGTCGCCGCGGAAGACAACCAGCGAAATCATCACCGATTATCGCCTGTTCGGGAGGCTAATGACGATGGTCATGCAGAGACTGATACGAAAATGATCGATTTGAATATGAAGCCTCAAAGGGTCCATGGGCAGGCTGCTAATAATCAGGTTCAACTGCTTTTCCTTATCTCTTCCTCCATAGTGTCAACTGTTTGTTTGGAGATTCCAAAACATGGAATGGTTCTAAATCCCTAA

mRNA sequence

AAAGGAAGAAAAAAAAACAAAGAACACAGAGAGAATAGAGAGCACGGCTCTTGGAGTGCGATTGGACCGAGAAAAGCGCGATGGATCTGAACCACAAATAACAATTGTTGAAGAAGACGCGGGCAGTGGCACCACGTGCAAAGAGAAGAGGGTAATCTAACAACGAAACCCCATCTCCACCATCCATTCCCATTCATCCATCCATTTGCATCCAATCTCCACACACCCAGTGCATGTTGTGGCAATATAAACAAACAAAAAAGCTTGGGACCCGCGTTAGATATGTAACTGGTGGATGAGAATAATCGGAGAACGCCATTCATTTCTCCACTCTCCTCCCTTTCCTCTTACAAAACTTGTGGCCATCCATTTCGCTCCCTCTTTCAAGTGCTAATTTGACAAAAAAGATCTTCCGTTTTTCCCTCTCTTCATTGCCTTCCATGTGCTCTTCTTCCTATTTATTATTGTTTCCCTTAGCCCAATTGTCTTCTCGAATCTTCTTTTACCCCCCCCAGGCCCCGCTAATCCAACCCCATTTCTCAATTTTCTCTGTTTCGATCCTCTTTGCTTTTATTTCCCTTTCTCTCTCTCTCTCTCTTCCTAGTCATTTCCCACCATCGTTTTCGTTGTCAAACGTCAAGCCCATCTTTAATGGAGCTATAATTTGGTCTAGGAAACGTCAGGAACTTGTTGTTCTTGTTCTTATTGGTTTCTGATTTGTGGGGGTTTGGTTTATTTGGGGCAGTTGTTTTTGGGTTTGTTTTCGTTTTCTTTTTCATCGTGTTTGTGGATGAGGACGGGGATATGAAGGCGTTGCTGTTGTAGTTTTAGTGTGGTTGATTTTGTTGGGGAGAGGAAATGAGAGTGGGGAGCTTCAATTATGAGAACACTTTGTGACTCTTGTGAAAGCGCTGCCGCTATCGTCTTTTGTGCTGCTGACGAAGCCGCCCTTTGCCGCTCTTGTGATGAGAAGGTCCATCTGTGCAATAAACTCGCAAGTCGACATGTAAGAGTTGGCCTTGCAAGTCCCAGTGATGTCCCCCGCTGCGATATATGCGAGAATGCACCTGCTTTCTTTTACTGTGAGATAGATGGAAGTTCCCTTTGTTTGCAATGTGACATGGTCGTTCATGTTGGAGGGAAAAGGACACATAAGAGATACCTTTTGCTAAGGCAGAGGTTTGAGTTTCCAGGAGATAAACCTATAAACCTTGATGCGCCGTCTCCACATTCCAAGGTTCCCAATAATATTGGTAGAGGGCATAACCAGACACTGCCCCATAAAGTCGCCGCGGAAGACAACCAGCGAAATCATCACCGATTATCGCCTGTTCGGGAGGCTAATGACGATGGTCATGCAGAGACTGATACGAAAATGATCGATTTGAATATGAAGCCTCAAAGGGTCCATGGGCAGGCTGCTAATAATCAGGTTCAACTGCTTTTCCTTATCTCTTCCTCCATAGTGTCAACTGTTTGTTTGGAGATTCCAAAACATGGAATGGTTCTAAATCCCTAA

Coding sequence (CDS)

ATGAGAACACTTTGTGACTCTTGTGAAAGCGCTGCCGCTATCGTCTTTTGTGCTGCTGACGAAGCCGCCCTTTGCCGCTCTTGTGATGAGAAGGTCCATCTGTGCAATAAACTCGCAAGTCGACATGTAAGAGTTGGCCTTGCAAGTCCCAGTGATGTCCCCCGCTGCGATATATGCGAGAATGCACCTGCTTTCTTTTACTGTGAGATAGATGGAAGTTCCCTTTGTTTGCAATGTGACATGGTCGTTCATGTTGGAGGGAAAAGGACACATAAGAGATACCTTTTGCTAAGGCAGAGGTTTGAGTTTCCAGGAGATAAACCTATAAACCTTGATGCGCCGTCTCCACATTCCAAGGTTCCCAATAATATTGGTAGAGGGCATAACCAGACACTGCCCCATAAAGTCGCCGCGGAAGACAACCAGCGAAATCATCACCGATTATCGCCTGTTCGGGAGGCTAATGACGATGGTCATGCAGAGACTGATACGAAAATGATCGATTTGAATATGAAGCCTCAAAGGGTCCATGGGCAGGCTGCTAATAATCAGGTTCAACTGCTTTTCCTTATCTCTTCCTCCATAGTGTCAACTGTTTGTTTGGAGATTCCAAAACATGGAATGGTTCTAAATCCCTAA

Protein sequence

MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDAPSPHSKVPNNIGRGHNQTLPHKVAAEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVHGQAANNQVQLLFLISSSIVSTVCLEIPKHGMVLNP
Homology
[Close]
BLAST of Cp4.1LG01g06700 vs. Swiss-Prot
Match: BBX18_ARATH (B-box zinc finger protein 18 OS=Arabidopsis thaliana GN=BBX18 PE=1 SV=2)

HSP 1 Score: 222.6 bits (566), Expect = 4.0e-57
Identity = 116/184 (63.04%), Postives = 131/184 (71.20%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICE 60
           MR LCD+CESAAAIVFCAADEAALC SCDEKVH CNKLASRH+RVGLA PS+ P CDICE
Sbjct: 1   MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDAPSPHSKV 120
           NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTH+R+LLLRQR EFPGDKP + D      + 
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLRCQK 120

Query: 121 PNNIGRGHNQTLPHKVAAEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVHGQA 180
            ++ GRG                        +E+N  G+ + D  MIDLN  PQRVH   
Sbjct: 121 ASS-GRG------------------------QESN--GNGDHDHNMIDLNSNPQRVHEPG 157

Query: 181 ANNQ 185
           ++NQ
Sbjct: 181 SHNQ 157

[Close]
BLAST of Cp4.1LG01g06700 vs. Swiss-Prot
Match: BBX19_ARATH (B-box zinc finger protein 19 OS=Arabidopsis thaliana GN=BBX19 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 8.9e-57
Identity = 116/183 (63.39%), Postives = 130/183 (71.04%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICE 60
           MR LCD+CE+AAAI+FCAADEAALCR CDEKVH+CNKLASRHVRVGLA PS+ P CDICE
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDAPSPHSKV 120
           NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTH R+LLLRQR EFPGDKP            
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGRFLLLRQRIEFPGDKP-----------K 120

Query: 121 PNNIGRGHNQTLPHKVAAEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVHGQA 180
            NN                DN +N  R+S     N + + + D +MIDLN  PQRVH  +
Sbjct: 121 ENN--------------TRDNLQN-QRVS--TNGNGEANGKIDDEMIDLNANPQRVHEPS 155

Query: 181 ANN 184
           +NN
Sbjct: 181 SNN 155

[Close]
BLAST of Cp4.1LG01g06700 vs. Swiss-Prot
Match: BBX22_ARATH (B-box zinc finger protein 22 OS=Arabidopsis thaliana GN=BBX22 PE=1 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 4.6e-21
Identity = 64/176 (36.36%), Postives = 91/176 (51.70%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGL-ASPSDVPRCDIC 60
           M+  C+ CE+A A V C ADEAALC +CDEK+H  NKLA +H RV L AS S +P+CDIC
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  ENAPAFFYCEIDGSSLCLQCDMVVHVGGKR--THKRYLL--LRQRFEFPGDKPINLDAPS 120
           + A  FF+C  D + LC +CD+ +H        H+R+LL  ++   E     P    +P+
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSPT 120

Query: 121 PHSKVPNNIGRGHNQTLPHKVA-----AEDNQRNHHRLSPVREANDDGHAETDTKM 167
              K         +   P K+A      +  Q     + P  + ND    +T TK+
Sbjct: 121 NDDKTMETKPFVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGTKVND----QTSTKL 172

[Close]
BLAST of Cp4.1LG01g06700 vs. Swiss-Prot
Match: BBX20_ARATH (B-box zinc finger protein 20 OS=Arabidopsis thaliana GN=BBX20 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.5e-19
Identity = 54/146 (36.99%), Postives = 75/146 (51.37%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPS--DVPRCDI 60
           M+  C  C+   A VFC ADEAALC  CD  VH  NKLA +H+R  L SP+  D P CDI
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HKRYLLLRQRFEFPGDKPINLDAPSP 120
           C    A  +C+ D + LC +CD+ +H   + T  H R+LL   +            +PS 
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKIS---------ASPSA 120

Query: 121 HSKVPNN---IGRGHNQTLPHKVAAE 140
           + +  N+      G  +T P  V++E
Sbjct: 121 YPRASNSNSAAAFGRAKTRPKSVSSE 137

[Close]
BLAST of Cp4.1LG01g06700 vs. Swiss-Prot
Match: BBX21_ARATH (B-box zinc finger protein 21 OS=Arabidopsis thaliana GN=BBX21 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.4e-19
Identity = 46/102 (45.10%), Postives = 60/102 (58.82%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPS----DVPRC 60
           M+  CD C+   A VFC ADEA+LC  CD +VH  NKLAS+H+R  L  PS      P C
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HKRYLL 97
           DIC++  A  +C+ D + LC  CD  +H   + T  H R+LL
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLL 102

[Close]
BLAST of Cp4.1LG01g06700 vs. TrEMBL
Match: A0A0A0KUM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047370 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 8.9e-96
Identity = 168/184 (91.30%), Postives = 174/184 (94.57%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICE 60
           MRTLCD+CE AAAIVFCAADEAALCRSCDEKVH+CNKLASRHVRVGLA+PSDVPRCDICE
Sbjct: 1   MRTLCDACEKAAAIVFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDAPSPHSKV 120
           NAPAFFYCEIDGSSLCLQCDM+VHVGGKRTHKRYLLLRQR EFPGDKPINLD PSPHSKV
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHKRYLLLRQRVEFPGDKPINLDDPSPHSKV 120

Query: 121 PNNIGRGHNQTLPHKVAAEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVHGQA 180
           PN IG+ HNQ  PHKV  EDNQ+NHHRLSPVREANDDGHAETDTKMIDLNMKP RVHGQA
Sbjct: 121 PNEIGKVHNQPPPHKVTVEDNQQNHHRLSPVREANDDGHAETDTKMIDLNMKPHRVHGQA 180

Query: 181 ANNQ 185
           ANNQ
Sbjct: 181 ANNQ 184

[Close]
BLAST of Cp4.1LG01g06700 vs. TrEMBL
Match: A0A061DFT8_THECC (B-box type zinc finger family protein OS=Theobroma cacao GN=TCM_000244 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.4e-72
Identity = 139/188 (73.94%), Postives = 156/188 (82.98%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICE 60
           MRTLCDSCESAAAIVFCAADEAALCR+CDEKVH+CNKLASRHVRVGLA+PSDVP CDICE
Sbjct: 1   MRTLCDSCESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLANPSDVPLCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDAPSPHSKV 120
           NAPAFFYCEIDGSSLCLQCDM+VHVGGKRTH RYLL RQR EFPGDKP N++ P+     
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHARYLLFRQRVEFPGDKPGNVEDPASQPVD 120

Query: 121 PNNIGRGHNQTLPHKVAAEDNQRNHHRLSPVR--EANDDGHAETDTKMIDLNMKPQRVHG 180
           P    RG NQ  P K    ++Q+N H++S V+  +AN DGH + DTKMIDLNMKP R+HG
Sbjct: 121 PGETRRGQNQ--PAKPTVGESQQN-HKVSSVQLVDANADGHVKMDTKMIDLNMKPHRIHG 180

Query: 181 QAANNQVQ 187
           QA+NNQ Q
Sbjct: 181 QASNNQEQ 185

[Close]
BLAST of Cp4.1LG01g06700 vs. TrEMBL
Match: A0A061E6F9_THECC (B-box type zinc finger family protein OS=Theobroma cacao GN=TCM_006783 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.6e-71
Identity = 138/188 (73.40%), Postives = 153/188 (81.38%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICE 60
           MRTLCD CESAAAI+FCAADEAALCRSCDEKVH+CNKLASRHVRVGLA PSDVPRCDICE
Sbjct: 49  MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLADPSDVPRCDICE 108

Query: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDAPSPHSKV 120
           NAPAFFYCE+DGSSLCLQCDM+VHVGGKRTH RYLLLRQR EFPGDKP  LD     +  
Sbjct: 109 NAPAFFYCEVDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGRLDELGLQTLD 168

Query: 121 PNNIGRGHNQTLPHKVAAEDNQRNHHRLS--PVREANDDGHAETDTKMIDLNMKPQRVHG 180
           PN + +  NQ  P K+AA +NQ+N HR+S  PV + N DG  +   K+IDLN KPQRVHG
Sbjct: 169 PNEVRKDKNQQQP-KLAARENQQN-HRVSPVPVLDGNSDGDGKVGNKLIDLNAKPQRVHG 228

Query: 181 QAANNQVQ 187
           QA+ NQ Q
Sbjct: 229 QASTNQEQ 234

[Close]
BLAST of Cp4.1LG01g06700 vs. TrEMBL
Match: A0A0D2QW12_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G196900 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 7.6e-71
Identity = 136/191 (71.20%), Postives = 154/191 (80.63%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICE 60
           MRT+CD+CESAAAIVFCAADEAALC +CDEKVHLCNKLASRHVRVGLA+PSDVPRCDICE
Sbjct: 1   MRTICDACESAAAIVFCAADEAALCSACDEKVHLCNKLASRHVRVGLANPSDVPRCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDAPSPHSKV 120
           NAPAFFYCEIDG+SLCLQCDM+VHVGGKRTH RYL+LRQR EFPG KP N++ P+     
Sbjct: 61  NAPAFFYCEIDGTSLCLQCDMIVHVGGKRTHGRYLVLRQRVEFPGYKPGNIEDPASQPLD 120

Query: 121 PNNIGRGHNQTLPHKVAAEDNQRNHHRLSPVR-EANDDGHAETDTKMIDLNMKPQRVHGQ 180
           P+   RG N      V   +NQ+N      +R +AN DGH ET TKMIDLNMKP R+HGQ
Sbjct: 121 PSETMRGQNHAAKRTVG--ENQQNDKACPVLRMDANADGHLETGTKMIDLNMKPHRIHGQ 180

Query: 181 AANNQVQLLFL 191
           A+NNQV+ L L
Sbjct: 181 ASNNQVRALLL 189

[Close]
BLAST of Cp4.1LG01g06700 vs. TrEMBL
Match: D7SP26_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03030 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 9.9e-71
Identity = 138/186 (74.19%), Postives = 153/186 (82.26%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICE 60
           MRTLCD CESAAAI+FCAADEAALCR CDEKVH+CNKLASRHVRVGLA PSDVPRCDICE
Sbjct: 1   MRTLCDVCESAAAILFCAADEAALCRVCDEKVHMCNKLASRHVRVGLADPSDVPRCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDAPSPHSKV 120
           NAPAFFYCEIDG+SLCLQCDM+VHVGGKRTH RYLLLRQR EFPGDK  NL+ P+     
Sbjct: 61  NAPAFFYCEIDGTSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKSGNLEDPALLPME 120

Query: 121 PNNIGRGHNQTLPHKVAAEDNQRNHHRLSPV--REANDDGHAETDTKMIDLNMKPQRVHG 180
           P    RG NQ+   K    +NQ+N  R+SPV   +AN DGHA+ DTK+IDLNMKP R+HG
Sbjct: 121 PGENRRGQNQS--SKPTVVENQQN-RRVSPVPTMDANADGHAKMDTKLIDLNMKPHRIHG 180

Query: 181 QAANNQ 185
           QA+NNQ
Sbjct: 181 QASNNQ 183

[Close]
BLAST of Cp4.1LG01g06700 vs. TAIR10
Match: AT2G21320.1 (AT2G21320.1 B-box zinc finger family protein)

HSP 1 Score: 222.6 bits (566), Expect = 2.3e-58
Identity = 116/184 (63.04%), Postives = 131/184 (71.20%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICE 60
           MR LCD+CESAAAIVFCAADEAALC SCDEKVH CNKLASRH+RVGLA PS+ P CDICE
Sbjct: 1   MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDAPSPHSKV 120
           NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTH+R+LLLRQR EFPGDKP + D      + 
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLRCQK 120

Query: 121 PNNIGRGHNQTLPHKVAAEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVHGQA 180
            ++ GRG                        +E+N  G+ + D  MIDLN  PQRVH   
Sbjct: 121 ASS-GRG------------------------QESN--GNGDHDHNMIDLNSNPQRVHEPG 157

Query: 181 ANNQ 185
           ++NQ
Sbjct: 181 SHNQ 157

[Close]
BLAST of Cp4.1LG01g06700 vs. TAIR10
Match: AT4G38960.3 (AT4G38960.3 B-box type zinc finger family protein)

HSP 1 Score: 200.7 bits (509), Expect = 9.2e-52
Identity = 116/226 (51.33%), Postives = 130/226 (57.52%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEK----------------------------- 60
           MR LCD+CE+AAAI+FCAADEAALCR CDEK                             
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKALHMRLDISKCSESVKRVQIVETSSLIWW 60

Query: 61  --------------VHLCNKLASRHVRVGLASPSDVPRCDICENAPAFFYCEIDGSSLCL 120
                         VH+CNKLASRHVRVGLA PS+ P CDICENAPAFFYCEIDGSSLCL
Sbjct: 61  IKMGTFCLQSLHLVVHMCNKLASRHVRVGLAEPSNAPCCDICENAPAFFYCEIDGSSLCL 120

Query: 121 QCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDAPSPHSKVPNNIGRGHNQTLPHKVA 180
           QCDMVVHVGGKRTH R+LLLRQR EFPGDKP             NN              
Sbjct: 121 QCDMVVHVGGKRTHGRFLLLRQRIEFPGDKP-----------KENN-------------- 180

Query: 181 AEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVHGQAANN 184
             DN +N  R+S     N + + + D +MIDLN  PQRVH  ++NN
Sbjct: 181 TRDNLQN-QRVS--TNGNGEANGKIDDEMIDLNANPQRVHEPSSNN 198

[Close]
BLAST of Cp4.1LG01g06700 vs. TAIR10
Match: AT1G78600.2 (AT1G78600.2 light-regulated zinc finger protein 1)

HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22
Identity = 64/176 (36.36%), Postives = 91/176 (51.70%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGL-ASPSDVPRCDIC 60
           M+  C+ CE+A A V C ADEAALC +CDEK+H  NKLA +H RV L AS S +P+CDIC
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  ENAPAFFYCEIDGSSLCLQCDMVVHVGGKR--THKRYLL--LRQRFEFPGDKPINLDAPS 120
           + A  FF+C  D + LC +CD+ +H        H+R+LL  ++   E     P    +P+
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSPT 120

Query: 121 PHSKVPNNIGRGHNQTLPHKVA-----AEDNQRNHHRLSPVREANDDGHAETDTKM 167
              K         +   P K+A      +  Q     + P  + ND    +T TK+
Sbjct: 121 NDDKTMETKPFVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGTKVND----QTSTKL 172

[Close]
BLAST of Cp4.1LG01g06700 vs. TAIR10
Match: AT4G39070.1 (AT4G39070.1 B-box zinc finger family protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-20
Identity = 54/146 (36.99%), Postives = 75/146 (51.37%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPS--DVPRCDI 60
           M+  C  C+   A VFC ADEAALC  CD  VH  NKLA +H+R  L SP+  D P CDI
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HKRYLLLRQRFEFPGDKPINLDAPSP 120
           C    A  +C+ D + LC +CD+ +H   + T  H R+LL   +            +PS 
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKIS---------ASPSA 120

Query: 121 HSKVPNN---IGRGHNQTLPHKVAAE 140
           + +  N+      G  +T P  V++E
Sbjct: 121 YPRASNSNSAAAFGRAKTRPKSVSSE 137

[Close]
BLAST of Cp4.1LG01g06700 vs. TAIR10
Match: AT1G75540.1 (AT1G75540.1 salt tolerance homolog2)

HSP 1 Score: 95.5 bits (236), Expect = 4.2e-20
Identity = 46/102 (45.10%), Postives = 60/102 (58.82%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPS----DVPRC 60
           M+  CD C+   A VFC ADEA+LC  CD +VH  NKLAS+H+R  L  PS      P C
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HKRYLL 97
           DIC++  A  +C+ D + LC  CD  +H   + T  H R+LL
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLL 102

[Close]
BLAST of Cp4.1LG01g06700 vs. NCBI nr
Match: gi|449457560|ref|XP_004146516.1| (PREDICTED: B-box zinc finger protein 18-like [Cucumis sativus])

HSP 1 Score: 357.8 bits (917), Expect = 1.3e-95
Identity = 168/184 (91.30%), Postives = 174/184 (94.57%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICE 60
           MRTLCD+CE AAAIVFCAADEAALCRSCDEKVH+CNKLASRHVRVGLA+PSDVPRCDICE
Sbjct: 1   MRTLCDACEKAAAIVFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDAPSPHSKV 120
           NAPAFFYCEIDGSSLCLQCDM+VHVGGKRTHKRYLLLRQR EFPGDKPINLD PSPHSKV
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHKRYLLLRQRVEFPGDKPINLDDPSPHSKV 120

Query: 121 PNNIGRGHNQTLPHKVAAEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVHGQA 180
           PN IG+ HNQ  PHKV  EDNQ+NHHRLSPVREANDDGHAETDTKMIDLNMKP RVHGQA
Sbjct: 121 PNEIGKVHNQPPPHKVTVEDNQQNHHRLSPVREANDDGHAETDTKMIDLNMKPHRVHGQA 180

Query: 181 ANNQ 185
           ANNQ
Sbjct: 181 ANNQ 184

[Close]
BLAST of Cp4.1LG01g06700 vs. NCBI nr
Match: gi|659102302|ref|XP_008452057.1| (PREDICTED: probable salt tolerance-like protein At1g78600 [Cucumis melo])

HSP 1 Score: 350.9 bits (899), Expect = 1.6e-93
Identity = 166/184 (90.22%), Postives = 172/184 (93.48%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICE 60
           MRTLCD+CESAAAIVFCAADEAALCRSCDEKVH+CNKLASRHVRVGLA+PSDVP CDICE
Sbjct: 1   MRTLCDACESAAAIVFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPCCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDAPSPHSKV 120
           NAPAFFYCEIDGSSLCLQCDM+VHVGGKRTHKRYLLLRQR EFPGDKPINLD PSP SKV
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHKRYLLLRQRVEFPGDKPINLDDPSPQSKV 120

Query: 121 PNNIGRGHNQTLPHKVAAEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVHGQA 180
           PN IG+ HNQ  PHKV  ED Q+NHHRLSPVREANDDGHAETDTKMIDLNMKP RVHGQA
Sbjct: 121 PNEIGKVHNQPPPHKVTVEDTQQNHHRLSPVREANDDGHAETDTKMIDLNMKPHRVHGQA 180

Query: 181 ANNQ 185
           ANNQ
Sbjct: 181 ANNQ 184

[Close]
BLAST of Cp4.1LG01g06700 vs. NCBI nr
Match: gi|590702956|ref|XP_007046745.1| (B-box type zinc finger family protein [Theobroma cacao])

HSP 1 Score: 280.8 bits (717), Expect = 2.0e-72
Identity = 139/188 (73.94%), Postives = 156/188 (82.98%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICE 60
           MRTLCDSCESAAAIVFCAADEAALCR+CDEKVH+CNKLASRHVRVGLA+PSDVP CDICE
Sbjct: 1   MRTLCDSCESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLANPSDVPLCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDAPSPHSKV 120
           NAPAFFYCEIDGSSLCLQCDM+VHVGGKRTH RYLL RQR EFPGDKP N++ P+     
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHARYLLFRQRVEFPGDKPGNVEDPASQPVD 120

Query: 121 PNNIGRGHNQTLPHKVAAEDNQRNHHRLSPVR--EANDDGHAETDTKMIDLNMKPQRVHG 180
           P    RG NQ  P K    ++Q+N H++S V+  +AN DGH + DTKMIDLNMKP R+HG
Sbjct: 121 PGETRRGQNQ--PAKPTVGESQQN-HKVSSVQLVDANADGHVKMDTKMIDLNMKPHRIHG 180

Query: 181 QAANNQVQ 187
           QA+NNQ Q
Sbjct: 181 QASNNQEQ 185

[Close]
BLAST of Cp4.1LG01g06700 vs. NCBI nr
Match: gi|720049512|ref|XP_010271471.1| (PREDICTED: B-box zinc finger protein 19 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 277.3 bits (708), Expect = 2.2e-71
Identity = 141/196 (71.94%), Postives = 163/196 (83.16%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICE 60
           MRTLCD CESAAAI+FCAADEAALCRSCDEKVH+CNKLASRHVRVGLA+PSDVPRCDICE
Sbjct: 1   MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDAPSPHSKV 120
           NAPAFFYCEIDGSSLCLQCDM+VHVGGKRTH RYLLLRQR EFPGDKP NL+  +  +  
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGNLEDLALQNTD 120

Query: 121 PNNIGRGHNQTLPHKVAAEDNQRNHHRLSPVR--EANDDGHAETDTKMIDLNMKPQRVHG 180
           P    R  N +LP K+ A ++Q+N HR+S V+  +AN+D H + DTKMIDLN +PQRVHG
Sbjct: 121 PGETRREQN-SLP-KLTARESQQN-HRVSTVQVLDANNDNHGKKDTKMIDLNARPQRVHG 180

Query: 181 QAANNQVQLLFLISSS 195
           QA+NNQ   + ++S S
Sbjct: 181 QASNNQAPGMDVLSGS 193

[Close]
BLAST of Cp4.1LG01g06700 vs. NCBI nr
Match: gi|590685164|ref|XP_007042027.1| (B-box type zinc finger family protein [Theobroma cacao])

HSP 1 Score: 276.6 bits (706), Expect = 3.7e-71
Identity = 138/188 (73.40%), Postives = 153/188 (81.38%), Query Frame = 1 

Query: 1   MRTLCDSCESAAAIVFCAADEAALCRSCDEKVHLCNKLASRHVRVGLASPSDVPRCDICE 60
           MRTLCD CESAAAI+FCAADEAALCRSCDEKVH+CNKLASRHVRVGLA PSDVPRCDICE
Sbjct: 49  MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLADPSDVPRCDICE 108

Query: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDAPSPHSKV 120
           NAPAFFYCE+DGSSLCLQCDM+VHVGGKRTH RYLLLRQR EFPGDKP  LD     +  
Sbjct: 109 NAPAFFYCEVDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGRLDELGLQTLD 168

Query: 121 PNNIGRGHNQTLPHKVAAEDNQRNHHRLS--PVREANDDGHAETDTKMIDLNMKPQRVHG 180
           PN + +  NQ  P K+AA +NQ+N HR+S  PV + N DG  +   K+IDLN KPQRVHG
Sbjct: 169 PNEVRKDKNQQQP-KLAARENQQN-HRVSPVPVLDGNSDGDGKVGNKLIDLNAKPQRVHG 228

Query: 181 QAANNQVQ 187
           QA+ NQ Q
Sbjct: 229 QASTNQEQ 234

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g06700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BBX18_ARATH4.0e-5763.04B-box zinc finger protein 18 OS=Arabidopsis thaliana GN=BBX18 PE=1 SV=2[more]
BBX19_ARATH8.9e-5763.39B-box zinc finger protein 19 OS=Arabidopsis thaliana GN=BBX19 PE=2 SV=1[more]
BBX22_ARATH4.6e-2136.36B-box zinc finger protein 22 OS=Arabidopsis thaliana GN=BBX22 PE=1 SV=2[more]
BBX20_ARATH2.5e-1936.99B-box zinc finger protein 20 OS=Arabidopsis thaliana GN=BBX20 PE=1 SV=1[more]
BBX21_ARATH7.4e-1945.10B-box zinc finger protein 21 OS=Arabidopsis thaliana GN=BBX21 PE=1 SV=1[more]
BLAST of Cp4.1LG01g06700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUM1_CUCSA8.9e-9691.30Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047370 PE=4 SV=1[more]
A0A061DFT8_THECC1.4e-7273.94B-box type zinc finger family protein OS=Theobroma cacao GN=TCM_000244 PE=4 SV=1[more]
A0A061E6F9_THECC2.6e-7173.40B-box type zinc finger family protein OS=Theobroma cacao GN=TCM_006783 PE=4 SV=1[more]
A0A0D2QW12_GOSRA7.6e-7171.20Uncharacterized protein OS=Gossypium raimondii GN=B456_007G196900 PE=4 SV=1[more]
D7SP26_VITVI9.9e-7174.19Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03030 PE=4 SV=... [more]
BLAST of Cp4.1LG01g06700 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G21320.12.3e-5863.04 B-box zinc finger family protein[more]
AT4G38960.39.2e-5251.33 B-box type zinc finger family protein[more]
AT1G78600.22.6e-2236.36 light-regulated zinc finger protein 1[more]
AT4G39070.11.4e-2036.99 B-box zinc finger family protein[more]
AT1G75540.14.2e-2045.10 salt tolerance homolog2[more]
BLAST of Cp4.1LG01g06700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457560|ref|XP_004146516.1|1.3e-9591.30PREDICTED: B-box zinc finger protein 18-like [Cucumis sativus][more]
gi|659102302|ref|XP_008452057.1|1.6e-9390.22PREDICTED: probable salt tolerance-like protein At1g78600 [Cucumis melo][more]
gi|590702956|ref|XP_007046745.1|2.0e-7273.94B-box type zinc finger family protein [Theobroma cacao][more]
gi|720049512|ref|XP_010271471.1|2.2e-7171.94PREDICTED: B-box zinc finger protein 19 isoform X1 [Nelumbo nucifera][more]
gi|590685164|ref|XP_007042027.1|3.7e-7173.40B-box type zinc finger family protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006508 proteolysis
cellular_component GO:0005622 intracellular
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008236 serine-type peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g06700.1Cp4.1LG01g06700.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 52..92
score: 4.6E-7coord: 3..34
score: 1.
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 1..47
score: 5.1E-9coord: 51..96
score: 1.9
IPR000315B-box-type zinc fingerPROFILEPS50119ZF_BBOXcoord: 1..47
score: 10.438coord: 51..96
score: 9
NoneNo IPR availablePANTHERPTHR31832FAMILY NOT NAMEDcoord: 1..188
score: 1.4E
NoneNo IPR availablePANTHERPTHR31832:SF5B-BOX TYPE ZINC FINGER-CONTAINING PROTEINcoord: 1..188
score: 1.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g06700Cucsa.106670Cucumber (Gy14) v1cgycpeB0238
Cp4.1LG01g06700CmaCh16G006060Cucurbita maxima (Rimu)cmacpeB354
Cp4.1LG01g06700CmaCh04G007460Cucurbita maxima (Rimu)cmacpeB731
Cp4.1LG01g06700CmoCh04G007940Cucurbita moschata (Rifu)cmocpeB684
Cp4.1LG01g06700CmoCh16G006600Cucurbita moschata (Rifu)cmocpeB316
Cp4.1LG01g06700Cla014604Watermelon (97103) v1cpewmB420
Cp4.1LG01g06700Csa4G047370Cucumber (Chinese Long) v2cpecuB400
Cp4.1LG01g06700MELO3C016370Melon (DHL92) v3.5.1cpemeB424
Cp4.1LG01g06700ClCG07G008310Watermelon (Charleston Gray)cpewcgB412
Cp4.1LG01g06700CSPI04G05650Wild cucumber (PI 183967)cpecpiB397
Cp4.1LG01g06700MELO3C016370.2Melon (DHL92) v3.6.1cpemedB496
Cp4.1LG01g06700CsaV3_4G005810Cucumber (Chinese Long) v3cpecucB0497
Cp4.1LG01g06700Bhi01G001851Wax gourdcpewgoB0510
Cp4.1LG01g06700CsGy4G005520Cucumber (Gy14) v2cgybcpeB502
Cp4.1LG01g06700Carg05728Silver-seed gourdcarcpeB1418
Cp4.1LG01g06700Carg14143Silver-seed gourdcarcpeB1303
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g06700Cp4.1LG14g02000Cucurbita pepo (Zucchini)cpecpeB237
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g06700Cucumber (Gy14) v2cgybcpeB807
Cp4.1LG01g06700Melon (DHL92) v3.6.1cpemedB510
Cp4.1LG01g06700Silver-seed gourdcarcpeB1302
Cp4.1LG01g06700Silver-seed gourdcarcpeB1417
Cp4.1LG01g06700Cucumber (Chinese Long) v3cpecucB0580
Cp4.1LG01g06700Wax gourdcpewgoB0511
Cp4.1LG01g06700Cucurbita pepo (Zucchini)cpecpeB073
Cp4.1LG01g06700Cucurbita pepo (Zucchini)cpecpeB233
Cp4.1LG01g06700Cucurbita pepo (Zucchini)cpecpeB385
Cp4.1LG01g06700Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g06700Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g06700Cucurbita maxima (Rimu)cmacpeB876
Cp4.1LG01g06700Cucurbita moschata (Rifu)cmocpeB312
Cp4.1LG01g06700Cucurbita moschata (Rifu)cmocpeB613
Cp4.1LG01g06700Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g06700Cucurbita moschata (Rifu)cmocpeB813
Cp4.1LG01g06700Wild cucumber (PI 183967)cpecpiB468
Cp4.1LG01g06700Bottle gourd (USVL1VR-Ls)cpelsiB373
Cp4.1LG01g06700Watermelon (Charleston Gray)cpewcgB374
Cp4.1LG01g06700Watermelon (97103) v1cpewmB443
Cp4.1LG01g06700Melon (DHL92) v3.5.1cpemeB434