CmaCh04G007460 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G007460
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	B-box zinc finger family protein
Location	Cma_Chr04 : 3799634 .. 3806659 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGCTTTCCTCTTACAAAACTTGTGGCCATCCATTTCGCTCCCTGTTTCAAGTGCTAATTTGACAAAAAGATCTTCCGTTTTTCCCCCTCTTCATTGCCTTCCATGTGCTCTTTTTCCTATTTATTCTTGTTTCCCTTAGCCCAATTGTCTTCTCGAATCTTCTTTTACCCCCCAGGCCCCGCTAATCCAACCCCATTTCTCAATTTTCTCTGTTTCGATCCTCTTTGCTTTCATTTCCCTCTCTCTCTCTCTTCCTAGTCATTTCCCACCATCGTTTTCGTTGTCAAACGTCAAGCCCATCTTTAATGGAGCTATAATTTGGTCTAGGAAAGGTCAGGAACTTGTTGTTCTTGTTCTTATTGCTTTCTGATTTGTGGGGGTTTGGTTTATTTGGGGCAGTTGTTTTTGGGTTTGTTTTCGTTTTCTTTTCCATCGTGTATGTGGATGAGGACGGGGATATGAAGGCGTTGCTGTTGTAGTTTTAGTGTGGTTGATTTTGTTGGGAGAGGAAATGAGAGTGGGGAGCTTCAATTATGAGAACACTTTGTGACTCTTGTGAAAGCGCTGCAGCTGTCGTCTTTTGTGCTGCTGACGAAGCCGCCCTTTGCCGCTCTTGTGATGAGAAGGTATTCCTCTTCGTTTCTTTCTTCTTTCTTTTGTCTGCCTTCTTTAATTTTTGCCCATATGGGTTGATTTTGCGTTATGTTGACCGTGGCCACTTCACTTTTGCAATGAGAATCTGGTGGATTGATAATTGAATCATGGATTATTGGCCCTTTAAAATTCTGGGTTGTCCTTAGATATGTGTCTGCATTTGATAATTGTATTGCTGGTGGATCTTGTACTTGATCAGAGGAATCTCTTCCTGTGGCTGCTAGGTGACTTTGGAGGAAGGCTTTTGTTGCTGTCAATTCAGCAAGAAATATGATTCATATTCTGCATTGCCTTGGATCTCTCTCAGCAATCTATGTTTAAAGGACAAATTCTCATGTTGACTGACACAGAAACATGATCACTCATTGAATTTATGTAAAACAAGTGCCTGATGGTAGTTCTGTTTGATATTTAACCTGAGGATTTGTCTGCTTGGATGATAATTTGACTGATCTTTGACCACTTGGTTTTGATGTCGGGACCTCCTGTCGCATGGCTGTCTGTGAGGGAAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCTAGTACTCGTTTTAAAACCTTGAGTGGAAGTCTAGAAGGGAAAGCCCAATTTGCTAGCGGTGGGTTTGGACTGATTACAAATGGTATAGGAGTCAGTCATCGGGGGTGTGCCAGCGAGGACCCTCGCCCCCAGGGGGTGGATTGTGAGATCCCTAGTGGATGTATTTTAAAACTTGAGGGGAATCGGAAAGCCCAAATAGAACAATATCGGTTAGTGGTGGGCTTGGGTTGTTACACTGTCATTCAAGTGTAGCTCGGGAGTTTATCGATTCCCTTTTCAAGGATAATAGATTGATATTTGATGTGACTGTATATTATTCTCACTCAGTTTTATGCCATCAAATTCTTTCCTGCTTGCTGCTGTCCTCGAAGTTGTGTTTGTTTCATATCAAAAAACTTAAAACTGAAGCTGAAATCTTAATAAATATGTTGTAAACTTGTTATGAAAGGTCCATCTGTGCAATAAACTAGCAAGTCGACATGTAAGAGTTGGCCTTGCAAGTCCCAGTGATGTCCCCCTGTGAATGTTTGATTAATCCACCACACCCAAATGGTGGTGAGAGTTCTTTTATTTATAATCATTTACAGAATACAGAAATAAGGTAAATTACAAATAATAAGGAAATAGCGATAAAAGGAAAGAATAATAAATGAATACAATATATTTGCATTTAGTAAAAGAGAAAATATGGTAACCCGTAATGTAAGGCAAATATCTAGATATTTGCCTTAATGAACGGTCAACTATCCTTAACACCCCCCCGCAAGCTGAGCGTCGGATTTGAACGAACATGAAGCTTGGATCTGAAAAATTCAAAAAGAGGTCGAGAAATACTCTTTGTGAAGATGTCAGCAACTTGGAGATGAGAGGGTACATATTGTGTACGAAGTTTGCCAGCGATAACAAGTTCTCGAAGGAAATGATAATCTAGTTCAACATGCTTGGCCCGCTTGTGAGAAACAGGATTAGAGCTCAAAAAAATAGCACTTTTGTTGTCACATAAGAGTAAGGGCTGCTGTGAAATAGGGACCTTGAGGTCATGCAAAAGATGCGTAACCCAAAGAAGTTCAGCAGCAGTTGTGGCAAGAGCACGATACTCAGATTCACAGCTGGAGCGTGATACAGTAGGTTGCTTTTTGGCACTCCAAGAAATGAGATTGTTACCAAGATAAATAGAATAGCCGGATGTAGAACGACGAGTATCGGGACAACCAGCCCAGTCAGCATCCGAATAAGCGACTAGCGTACTAGGAACAGTGGATGGACGAAAGATAAGACCAAAGTGGAGTGTTCCTTTGACATAGCGAAGAATACGTTTGACAGCAAGAAAGTGATCTGCAGTAGGGGCATGCAAGAATTGACTGACAGAATTGACAGCATAGGCAATATCTGGACGCGTGATAGTCAAGTACTGAAGGGCGCCAACAAGAGATCTGTAGAGAGTAGGATCAGAGAAAGGAGAACCATCAGCAGTCAGGTGTTGAGAAACAACCATGGGAGTGTGAACTGGTTTGCTATCGAGCAACTGAGCACGAGTAAGAATATCTCGAGCATATTTTAACTGACTGATAAAGAGACCATCAGGAGTGGGTGAAGCTTCAAGACCAAGAAAGTAACTGAGAGAACCCAAATCTTTGGTAGCAAACTCAGAATGAAGCTTGCGAGTAAAGCTGTTAATAAGAGATGAGTTGTTGCCGGTAACAATAATGTCATCAACATAAAGAAGCAAATAGATAAGGTTAGATTGCTGATGAAAGACAAAAAGGGACGTGTCAGCGCGACTACAAGAAAACCCAAGTGTGAGAAGAAATGAGCTAAAACGCTGAAACCAAGCACGAGGAGCTTGCTTTAAGCCATAGAGAGCTTTCTTTAATAGACAAACATGCTTTGGAAATCGAGGATCAACATACCCAGGAGGTTGTTCCATATGAACACGTTCAATAAGCGTTCCATTGAGAAAAGCATTCTTGACATCAAGTTGTCGAAGAGGCCATTTATTTGTGACTGCAATAGAAAGCACAACACGGACAGTGGTAGCTTTGACAACTGGACTGAAAGTGTCAGTGTAGTCAAGACCAGGAACCTGAGTATAACCTTTGGCAACGAGACGAGCCTTGAAACGCTCGACGGATCCATCGGGCAAATATTTAATACGAAACACCCATTTAGAGCCCACGATGTTGGTGTTGGCAGGGCGAGGAACCAAAGTCCAAGTATCATTTTGTTGTAACGCTCGAATTTCTTCATCCATGGCAGCCACCCAAGCAGGATTCTTAGCCGCAGATTTGAATCCTTTTGGCTCAGTGGATGCAAGAAGAGCAGAGAGAAGTCCAGATGAGCCCAACATACCAAGATTTGCTGGATGACGAGTCTTGAATATACCAGCTTTGGCGCGTGTGATCATAGGATGAGTGCCCAAAGAAGAGAAATCAACAGGAGGTTCAATAGAGGTTGAATTAGAAGTCGAGGGTGACAAAGTGGAACCTGCAAGAGAAGTATCAACCTGCACAGACTCATCTACAAGGTCAGAACAAATATCACACGGGGATGAACTGGATTGAGGAATGTGCGGTGATGAAGTGGTAGGGGGGGATGAATCAATATGATGAAGATGTGGTTCCAAGAAATTTGAAATAGGAATAGTGGAAAGAGGTTGGGCTTGGGAGCTAGGGATAGCAGGAAAGTGAGTTTCATCAAATTGAGCATGGCAGGTGATATATAGCTTAGTGGTGGCGGGATCAAGACAGCGGAACCCTTTATGAACAGGACTATAACCCAAAAAAATACAAGGAATGCTGCGGGGAGAAAGCTTGTTAGGCATATAATCACGCAAATAAGGATAAACACGACAACCAAAGGGATGAAAATTGTCATAATGTGGAGTGTAGCCATAAAGGAGTTCAAAGGGTGACTTACCTCCAAGAAGTGGAGTAGGCAACCGGTTGATAATATAAGCTGCAGTGCTGAAGGCGTCAACCCAAAAACGAGGAGAAAGATGAGAGTGAAAGAGAAGGGCCAAGCCAGTCTCAGTCACATGACGATGTTTTCTCTCAACACGACCATTTTGAGCAGGTGTATATGGACAAGAGAGTTGATGGTGGATGCCAGAATTACGTAAATGAGTTTTGAAACAAGTACTAGTAAATTCGGTACCACCATCGCTTTGAAATACCTTGATACGAGAAGAATATTGATTTTCCACAAATTTTTGAAATTGAAGAAAAATATCAAAAAAATCAGATTTAAATTTTAAAGGGTAAAACCAAGTGAATCGAGAATAATCATCAATAAAAATAGCATAATAAAGAAAACCCGAATTTGATTTGACGGGAGAAGGACCCCAAAGATCACAATGAATAAGATCTAACACATGAGACGACCTACGTTCATTGCGGGAATAAGGCAATCGATGGCTTTTCGCAAGCTGACAACTATTACATAATGATGGAGAAGGCAATAAAGACGTAAGAGAAAGATGACCTTTTTTATTTAAAAAAGAAATAACAGAATGATTCACATGACCCAGACGAGCATGCCATAAATCATATGAAGCACGTAAAGATTTGTTTTTAAGGGCTGAAATAAAAGCAGAGTTGCCGCGCTCCAGCACATATAGCCCTCCATCTCTTTTACCGGTTGCCACCACCCTTCCTGTTTGATGATTCTGGATAGTAATAAGATTATTAGTAAATGTAACGGAGAGAGGAAAATCAGACGTTAATTTACTTATGGAAAGAAGATTTTTAGTGAGGTGAGGGACAACCAAGACATCTAATAAGTGAATATTTGGAACAGGAGAAAGAGTACCGATGTGGGTAATGGGTAGGGATGCACCGTTTCCTACAATCACAGAGTCCTTACCCGTGTAATTTTTAGACTGATCCAGAATTGATGGGTCGGCAGTCATATGGGCCGAAGCTCCAGTGTCCAAAAACCAATCAGCAGCATCGGGTCCAGCAATAGAACATGACGTGTTAAAGGCTTCAGCAAGGTGAGCATGAGAAGAATCAGGTCGAACATACCGTTGGTTGCAGCGGTCAGCATAATGGCCCTCTTTGCGGCATATTTGGCAATGAGGTGGTCGACGACCCTGACTTGAGTGGGTTCGTCCTCGATTAGAAGAGTTGTTTTTGTGAGAATAAGAACGACCTCGCTGGTTGGTAAAGGAAGCAGGGTGACTTTCATGGGTGCGACCACGATTAGTGGCTATGAATGCTGTAGGAGTGGAGTCAGAGGACTCAAGGGAGCGCTGGAACAACTCAAAACTTTCAGTTTTAGAGACTAGATCTGCAAAACAGGGGATAGGGGTGAGAGCCATCTGAGCAGTAGAAAAAGCTGAAAATTCGGTGCCGAGTCCACGAAGGAACCAATGCACTTTATCAATGTCCTCGACGGGTCTGCCAATGGCATGAAGTTGGTCACAAATTTTTTTGAAGGCACGGGCATACTCAGCAACAGGTTTTGTGCCACGTTTCATCAACTGCAAGTCATCCTTGAGTCTCAGTTCACGAGCTTTTGACTGATGGCTGTACGTAGTTTCCAACGCAAGCCAAACATCACGTGCAGTAGAGAGACCAACGACAACAGCCATGGCTTCCTCAGTGAGAGAGGAGAGCAGGAGACAGAGAAGTCGTTGATCGGCTGCTCTCCATGCCAAATATTTGGGGTTGAATGTTGAAGAGGTTTCTGGTTCAAAGCGAGGTGGTGGAACCATAGTTCCATCGACATAGCCCAGCATGTCTTGACTCTCAAGAAGAGGGAGAAGTTGGCTTTTCCAAAGAAGATAATTGGAGGAAGAAAGTTTGATGGTGATCATATGGATTAGAGTATTGAAAGGAAGAAGATGATAACAAAATTCGGAAGCCATAGAGAAGAAAGGATCAGGGTTGTTAAACCGAAAGGGCTCTGATACCATGTGAATGTTTGATTAATCCACCACACCCAAATGGTGGTGAGAGTTCTTTTATTTATAATCATTTACAGAATACAGAAATAAGGTAAATTACAAATAATAAGGAAATAGCGATAAAAGGAAAGAATAATAAATGAATACAATATATTTGCATTTAGTAAAAGAGAAAATATGGTAACCCGTAATGTAAGGCAAATATCTAGATATTTGCCTTAATGAACGGTCAACTATCCTTAACACCCCCGCTGCGATATATGCGAGAATGCACCTGGTATGGACGTTTTTCCTTCTGTTTTTCGTACTTGTTAGCTTTGTTATGTACCGCTATTTGGGACAGTCTAGTTAACTTAGATGTATTTATTTTCTGGCCTTGGAAATTGCTTGCAGCTTTCTTTTACTGTGAGATAGATGGAAGTTCCCTTTGTTTGCAATGTGACATGGTCGTTCATGTTGGAGGGAAAAGGACACATAAGAGATACCTTTTGCTAAGGCAGAGGTTTGAGGTTGGTCGATAGATTGCGATACGACCTTGTGTGTTTTCCAGCTACTTAAAAATTGGAACTTTGAACTTGTTTCTTTTTCAGTTTCCAGGAGATAAACCTATAAATCTTGATGAGCCATCTCCACATTCCAAGGTTCCCAATAATATTGGTAAAGGACATAACCAGACACTGCCGCATAAAGTCGCCGTGGAAGACAACCAGCGAAATCATCACCGATTATCGCCTGTTCGGGAGGCTAATGATGATGGTCATGCAGAGACTGATACGAAAATGATCGATTTGAATATGAAGCCTCAAAGGGTCTGTGGGCAGGCTGCGAATAATCAGGTTCAACTGCTTTTCCTTATCTCTATAGTGTCAACTGTTTGTTTGGAGATTCCAAAACATGGAATGGTTCTAAATCCCTAA

mRNA sequence

CTCGCTTTCCTCTTACAAAACTTGTGGCCATCCATTTCGCTCCCTGTTTCAAGTGCTAATTTGACAAAAAGATCTTCCGTTTTTCCCCCTCTTCATTGCCTTCCATGTGCTCTTTTTCCTATTTATTCTTGTTTCCCTTAGCCCAATTGTCTTCTCGAATCTTCTTTTACCCCCCAGGCCCCGCTAATCCAACCCCATTTCTCAATTTTCTCTGTTTCGATCCTCTTTGCTTTCATTTCCCTCTCTCTCTCTCTTCCTAGTCATTTCCCACCATCGTTTTCGTTGTCAAACGTCAAGCCCATCTTTAATGGAGCTATAATTTGGTCTAGGAAAGGTCAGGAACTTGTTGTTCTTGTTCTTATTGCTTTCTGATTTGTGGGGGTTTGGTTTATTTGGGGCAGTTGTTTTTGGGTTTGTTTTCGTTTTCTTTTCCATCGTGTATGTGGATGAGGACGGGGATATGAAGGCGTTGCTGTTGTAGTTTTAGTGTGGTTGATTTTGTTGGGAGAGGAAATGAGAGTGGGGAGCTTCAATTATGAGAACACTTTGTGACTCTTGTGAAAGCGCTGCAGCTGTCGTCTTTTGTGCTGCTGACGAAGCCGCCCTTTGCCGCTCTTGTGATGAGAAGAGGAATCTCTTCCTGTGGCTGCTAGCTTTCTTTTACTGTGAGATAGATGGAAGTTCCCTTTGTTTGCAATGTGACATGGTCGTTCATGTTGGAGGGAAAAGGACACATAAGAGATACCTTTTGCTAAGGCAGAGGTTTGAGTTTCCAGGAGATAAACCTATAAATCTTGATGAGCCATCTCCACATTCCAAGGTTCCCAATAATATTGGTAAAGGACATAACCAGACACTGCCGCATAAAGTCGCCGTGGAAGACAACCAGCGAAATCATCACCGATTATCGCCTGTTCGGGAGGCTAATGATGATGGTCATGCAGAGACTGATACGAAAATGATCGATTTGAATATGAAGCCTCAAAGGGTCTGTGGGCAGGCTGCGAATAATCAGGTTCAACTGCTTTTCCTTATCTCTATAGTGTCAACTGTTTGTTTGGAGATTCCAAAACATGGAATGGTTCTAAATCCCTAA

Coding sequence (CDS)

ATGAGAACACTTTGTGACTCTTGTGAAAGCGCTGCAGCTGTCGTCTTTTGTGCTGCTGACGAAGCCGCCCTTTGCCGCTCTTGTGATGAGAAGAGGAATCTCTTCCTGTGGCTGCTAGCTTTCTTTTACTGTGAGATAGATGGAAGTTCCCTTTGTTTGCAATGTGACATGGTCGTTCATGTTGGAGGGAAAAGGACACATAAGAGATACCTTTTGCTAAGGCAGAGGTTTGAGTTTCCAGGAGATAAACCTATAAATCTTGATGAGCCATCTCCACATTCCAAGGTTCCCAATAATATTGGTAAAGGACATAACCAGACACTGCCGCATAAAGTCGCCGTGGAAGACAACCAGCGAAATCATCACCGATTATCGCCTGTTCGGGAGGCTAATGATGATGGTCATGCAGAGACTGATACGAAAATGATCGATTTGAATATGAAGCCTCAAAGGGTCTGTGGGCAGGCTGCGAATAATCAGGTTCAACTGCTTTTCCTTATCTCTATAGTGTCAACTGTTTGTTTGGAGATTCCAAAACATGGAATGGTTCTAAATCCCTAA

Protein sequence

MRTLCDSCESAAAVVFCAADEAALCRSCDEKRNLFLWLLAFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKVPNNIGKGHNQTLPHKVAVEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVCGQAANNQVQLLFLISIVSTVCLEIPKHGMVLNP

Homology

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BLAST of CmaCh04G007460 vs. Swiss-Prot
Match: BBX18_ARATH (B-box zinc finger protein 18 OS=Arabidopsis thaliana GN=BBX18 PE=1 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-34
Identity = 88/184 (47.83%), Postives = 103/184 (55.98%), Query Frame = 1


Query: 1   MRTLCDSCESAAAVVFCAADEAALCRSCDEK---------RNLFLWLL------------ 60
           MR LCD+CESAAA+VFCAADEAALC SCDEK         R+L + L             
Sbjct: 1   MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60

Query: 61  ---AFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKV 120
              AFFYCEIDGSSLCLQCDMVVHVGGKRTH+R+LLLRQR EFPGDKP + D+     + 
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLRCQ- 120

Query: 121 PNNIGKGHNQTLPHKVAVEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVCGQA 161
                                     + S  R    +G+ + D  MIDLN  PQRV    
Sbjct: 121 --------------------------KASSGRGQESNGNGDHDHNMIDLNSNPQRVHEPG 157

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BLAST of CmaCh04G007460 vs. Swiss-Prot
Match: BBX19_ARATH (B-box zinc finger protein 19 OS=Arabidopsis thaliana GN=BBX19 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.7e-33
Identity = 88/183 (48.09%), Postives = 104/183 (56.83%), Query Frame = 1


Query: 1   MRTLCDSCESAAAVVFCAADEAALCRSCDEKRNLFLWLL--------------------- 60
           MR LCD+CE+AAA++FCAADEAALCR CDEK ++   L                      
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICE 60

Query: 61  ---AFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKV 120
              AFFYCEIDGSSLCLQCDMVVHVGGKRTH R+LLLRQR EFPGDKP            
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGRFLLLRQRIEFPGDKP------------ 120

Query: 121 PNNIGKGHNQTLPHKVAVEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVCGQA 160
                K +N          DN +N  R+S     N + + + D +MIDLN  PQRV   +
Sbjct: 121 -----KENN--------TRDNLQN-QRVS--TNGNGEANGKIDDEMIDLNANPQRVHEPS 155

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BLAST of CmaCh04G007460 vs. Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.8e-06
Identity = 32/84 (38.10%), Postives = 42/84 (50.00%), Query Frame = 1


Query: 4  LCDSCESAAAVVFCAADEAALCRSCDEK---------RNLFLWLL-------AFFYCEID 63
          LCDSC+S AA +FC AD A LC  CD K         R+  +WL        A   C+ D
Sbjct: 7  LCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKAD 66

Query: 64 GSSLCLQCDMVVHVGG--KRTHKR 70
           ++LC+ CD  +H      R H+R
Sbjct: 67 AAALCVTCDRDIHSANPLSRRHER 90

[Close]

BLAST of CmaCh04G007460 vs. Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.8e-06
Identity = 31/87 (35.63%), Postives = 41/87 (47.13%), Query Frame = 1


Query: 5  CDSCESAAAVVFCAADEAALCRSCDEKRNLFLWLL----------------AFFYCEIDG 64
          CD+C SAA  V+C AD A LC SCD + +    L                 A F+C+ D 
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADA 71

Query: 65 SSLCLQCDMVVHVGG--KRTHKRYLLL 74
          +SLC  CD  +H      R H+R  +L
Sbjct: 72 ASLCTTCDSEIHSANPLARRHQRVPIL 98

[Close]

BLAST of CmaCh04G007460 vs. Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 6.3e-06
Identity = 30/84 (35.71%), Postives = 42/84 (50.00%), Query Frame = 1


Query: 4  LCDSCESAAAVVFCAADEAALCRSCDEK---------RNLFLWLL-------AFFYCEID 63
          LCDSC+SA A ++C  D A LC SCD K         R+  +W+        A   C+ D
Sbjct: 5  LCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKAD 64

Query: 64 GSSLCLQCDMVVHVGG--KRTHKR 70
           ++LC+ CD  +H      R H+R
Sbjct: 65 AAALCVTCDRDIHSANPLARRHER 88

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BLAST of CmaCh04G007460 vs. TrEMBL
Match: A0A0A0KUM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047370 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.3e-71
Identity = 139/184 (75.54%), Postives = 146/184 (79.35%), Query Frame = 1


Query: 1   MRTLCDSCESAAAVVFCAADEAALCRSCDEKRNLFLWLL--------------------- 60
           MRTLCD+CE AAA+VFCAADEAALCRSCDEK ++   L                      
Sbjct: 1   MRTLCDACEKAAAIVFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60

Query: 61  ---AFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKV 120
              AFFYCEIDGSSLCLQCDM+VHVGGKRTHKRYLLLRQR EFPGDKPINLD+PSPHSKV
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHKRYLLLRQRVEFPGDKPINLDDPSPHSKV 120

Query: 121 PNNIGKGHNQTLPHKVAVEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVCGQA 161
           PN IGK HNQ  PHKV VEDNQ+NHHRLSPVREANDDGHAETDTKMIDLNMKP RV GQA
Sbjct: 121 PNEIGKVHNQPPPHKVTVEDNQQNHHRLSPVREANDDGHAETDTKMIDLNMKPHRVHGQA 180

[Close]

BLAST of CmaCh04G007460 vs. TrEMBL
Match: A0A061DFT8_THECC (B-box type zinc finger family protein OS=Theobroma cacao GN=TCM_000244 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.7e-48
Identity = 109/188 (57.98%), Postives = 129/188 (68.62%), Query Frame = 1


Query: 1   MRTLCDSCESAAAVVFCAADEAALCRSCDEKRNLFLWLL--------------------- 60
           MRTLCDSCESAAA+VFCAADEAALCR+CDEK ++   L                      
Sbjct: 1   MRTLCDSCESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLANPSDVPLCDICE 60

Query: 61  ---AFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKV 120
              AFFYCEIDGSSLCLQCDM+VHVGGKRTH RYLL RQR EFPGDKP N+++P+     
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHARYLLFRQRVEFPGDKPGNVEDPASQPVD 120

Query: 121 PNNIGKGHNQTLPHKVAVEDNQRNHHRLSPVR--EANDDGHAETDTKMIDLNMKPQRVCG 163
           P    +G NQ  P K  V ++Q+N H++S V+  +AN DGH + DTKMIDLNMKP R+ G
Sbjct: 121 PGETRRGQNQ--PAKPTVGESQQN-HKVSSVQLVDANADGHVKMDTKMIDLNMKPHRIHG 180

[Close]

BLAST of CmaCh04G007460 vs. TrEMBL
Match: A0A061E6F9_THECC (B-box type zinc finger family protein OS=Theobroma cacao GN=TCM_006783 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.5e-46
Identity = 108/188 (57.45%), Postives = 124/188 (65.96%), Query Frame = 1


Query: 1   MRTLCDSCESAAAVVFCAADEAALCRSCDEKRNLFLWLL--------------------- 60
           MRTLCD CESAAA++FCAADEAALCRSCDEK ++   L                      
Sbjct: 49  MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLADPSDVPRCDICE 108

Query: 61  ---AFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKV 120
              AFFYCE+DGSSLCLQCDM+VHVGGKRTH RYLLLRQR EFPGDKP  LDE    +  
Sbjct: 109 NAPAFFYCEVDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGRLDELGLQTLD 168

Query: 121 PNNIGKGHNQTLPHKVAVEDNQRNHHRLS--PVREANDDGHAETDTKMIDLNMKPQRVCG 163
           PN + K  NQ  P K+A  +NQ+N HR+S  PV + N DG  +   K+IDLN KPQRV G
Sbjct: 169 PNEVRKDKNQQQP-KLAARENQQN-HRVSPVPVLDGNSDGDGKVGNKLIDLNAKPQRVHG 228

[Close]

BLAST of CmaCh04G007460 vs. TrEMBL
Match: A0A0D2QW12_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G196900 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 9.7e-46
Identity = 105/191 (54.97%), Postives = 126/191 (65.97%), Query Frame = 1


Query: 1   MRTLCDSCESAAAVVFCAADEAALCRSCDEKRNLFLWLL--------------------- 60
           MRT+CD+CESAAA+VFCAADEAALC +CDEK +L   L                      
Sbjct: 1   MRTICDACESAAAIVFCAADEAALCSACDEKVHLCNKLASRHVRVGLANPSDVPRCDICE 60

Query: 61  ---AFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKV 120
              AFFYCEIDG+SLCLQCDM+VHVGGKRTH RYL+LRQR EFPG KP N+++P+     
Sbjct: 61  NAPAFFYCEIDGTSLCLQCDMIVHVGGKRTHGRYLVLRQRVEFPGYKPGNIEDPASQPLD 120

Query: 121 PNNIGKGHNQTLPHKVAVEDNQRNHHRLSPVR-EANDDGHAETDTKMIDLNMKPQRVCGQ 167
           P+   +G N     K  V +NQ+N      +R +AN DGH ET TKMIDLNMKP R+ GQ
Sbjct: 121 PSETMRGQNHAA--KRTVGENQQNDKACPVLRMDANADGHLETGTKMIDLNMKPHRIHGQ 180

[Close]

BLAST of CmaCh04G007460 vs. TrEMBL
Match: D7SP26_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03030 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 9.7e-46
Identity = 107/186 (57.53%), Postives = 126/186 (67.74%), Query Frame = 1


Query: 1   MRTLCDSCESAAAVVFCAADEAALCRSCDEKRNLFLWLL--------------------- 60
           MRTLCD CESAAA++FCAADEAALCR CDEK ++   L                      
Sbjct: 1   MRTLCDVCESAAAILFCAADEAALCRVCDEKVHMCNKLASRHVRVGLADPSDVPRCDICE 60

Query: 61  ---AFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKV 120
              AFFYCEIDG+SLCLQCDM+VHVGGKRTH RYLLLRQR EFPGDK  NL++P+     
Sbjct: 61  NAPAFFYCEIDGTSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKSGNLEDPALLPME 120

Query: 121 PNNIGKGHNQTLPHKVAVEDNQRNHHRLSPV--REANDDGHAETDTKMIDLNMKPQRVCG 161
           P    +G NQ+   K  V +NQ+N  R+SPV   +AN DGHA+ DTK+IDLNMKP R+ G
Sbjct: 121 PGENRRGQNQS--SKPTVVENQQN-RRVSPVPTMDANADGHAKMDTKLIDLNMKPHRIHG 180

[Close]

BLAST of CmaCh04G007460 vs. TAIR10
Match: AT2G21320.1 (AT2G21320.1 B-box zinc finger family protein)

HSP 1 Score: 147.5 bits (371), Expect = 8.1e-36
Identity = 88/184 (47.83%), Postives = 103/184 (55.98%), Query Frame = 1


Query: 1   MRTLCDSCESAAAVVFCAADEAALCRSCDEK---------RNLFLWLL------------ 60
           MR LCD+CESAAA+VFCAADEAALC SCDEK         R+L + L             
Sbjct: 1   MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60

Query: 61  ---AFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKV 120
              AFFYCEIDGSSLCLQCDMVVHVGGKRTH+R+LLLRQR EFPGDKP + D+     + 
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLRCQ- 120

Query: 121 PNNIGKGHNQTLPHKVAVEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVCGQA 161
                                     + S  R    +G+ + D  MIDLN  PQRV    
Sbjct: 121 --------------------------KASSGRGQESNGNGDHDHNMIDLNSNPQRVHEPG 157

[Close]

BLAST of CmaCh04G007460 vs. TAIR10
Match: AT4G38960.3 (AT4G38960.3 B-box type zinc finger family protein)

HSP 1 Score: 102.4 bits (254), Expect = 3.0e-22
Identity = 71/156 (45.51%), Postives = 83/156 (53.21%), Query Frame = 1


Query: 4   LCDSCESAAAVVFCAADEAALCRSCDEKRNLFLWLLAFFYCEIDGSSLCLQCDMVVHVGG 63
           +C+   S    V  A    A C  CD   N      AFFYCEIDGSSLCLQCDMVVHVGG
Sbjct: 77  MCNKLASRHVRVGLAEPSNAPC--CDICENA----PAFFYCEIDGSSLCLQCDMVVHVGG 136

Query: 64  KRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKVPNNIGKGHNQTLPHKVAVEDNQRNHHR 123
           KRTH R+LLLRQR EFPGDKP                 K +N          DN +N  R
Sbjct: 137 KRTHGRFLLLRQRIEFPGDKP-----------------KENN--------TRDNLQN-QR 196

Query: 124 LSPVREANDDGHAETDTKMIDLNMKPQRVCGQAANN 160
           +S     N + + + D +MIDLN  PQRV   ++NN
Sbjct: 197 VS--TNGNGEANGKIDDEMIDLNANPQRVHEPSSNN 198

[Close]

BLAST of CmaCh04G007460 vs. TAIR10
Match: AT2G24790.1 (AT2G24790.1 CONSTANS-like 3)

HSP 1 Score: 53.5 bits (127), Expect = 1.6e-07
Identity = 32/84 (38.10%), Postives = 42/84 (50.00%), Query Frame = 1


Query: 4  LCDSCESAAAVVFCAADEAALCRSCDEK---------RNLFLWLL-------AFFYCEID 63
          LCDSC+S AA +FC AD A LC  CD K         R+  +WL        A   C+ D
Sbjct: 7  LCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKAD 66

Query: 64 GSSLCLQCDMVVHVGG--KRTHKR 70
           ++LC+ CD  +H      R H+R
Sbjct: 67 AAALCVTCDRDIHSANPLSRRHER 90

[Close]

BLAST of CmaCh04G007460 vs. TAIR10
Match: AT5G15850.1 (AT5G15850.1 CONSTANS-like 1)

HSP 1 Score: 52.8 bits (125), Expect = 2.7e-07
Identity = 31/87 (35.63%), Postives = 41/87 (47.13%), Query Frame = 1


Query: 5  CDSCESAAAVVFCAADEAALCRSCDEKRNLFLWLL----------------AFFYCEIDG 64
          CD+C SAA  V+C AD A LC SCD + +    L                 A F+C+ D 
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADA 71

Query: 65 SSLCLQCDMVVHVGG--KRTHKRYLLL 74
          +SLC  CD  +H      R H+R  +L
Sbjct: 72 ASLCTTCDSEIHSANPLARRHQRVPIL 98

[Close]

BLAST of CmaCh04G007460 vs. TAIR10
Match: AT5G24930.1 (AT5G24930.1 CONSTANS-like 4)

HSP 1 Score: 52.4 bits (124), Expect = 3.5e-07
Identity = 30/84 (35.71%), Postives = 42/84 (50.00%), Query Frame = 1


Query: 4   LCDSCESAAAVVFCAADEAALCRSCDEK---------RNLFLWLL-------AFFYCEID 63
           LCDSC+SA A ++C  D A LC SCD K         R+  +W+        A   C+ D
Sbjct: 49  LCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKAD 108

Query: 64  GSSLCLQCDMVVHVGG--KRTHKR 70
            ++LC+ CD  +H      R H+R
Sbjct: 109 AAALCVTCDRDIHSANPLARRHER 132

[Close]

BLAST of CmaCh04G007460 vs. NCBI nr
Match: gi|449457560|ref|XP_004146516.1| (PREDICTED: B-box zinc finger protein 18-like [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 3.3e-71
Identity = 139/184 (75.54%), Postives = 146/184 (79.35%), Query Frame = 1


Query: 1   MRTLCDSCESAAAVVFCAADEAALCRSCDEKRNLFLWLL--------------------- 60
           MRTLCD+CE AAA+VFCAADEAALCRSCDEK ++   L                      
Sbjct: 1   MRTLCDACEKAAAIVFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60

Query: 61  ---AFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKV 120
              AFFYCEIDGSSLCLQCDM+VHVGGKRTHKRYLLLRQR EFPGDKPINLD+PSPHSKV
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHKRYLLLRQRVEFPGDKPINLDDPSPHSKV 120

Query: 121 PNNIGKGHNQTLPHKVAVEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVCGQA 161
           PN IGK HNQ  PHKV VEDNQ+NHHRLSPVREANDDGHAETDTKMIDLNMKP RV GQA
Sbjct: 121 PNEIGKVHNQPPPHKVTVEDNQQNHHRLSPVREANDDGHAETDTKMIDLNMKPHRVHGQA 180

[Close]

BLAST of CmaCh04G007460 vs. NCBI nr
Match: gi|659102302|ref|XP_008452057.1| (PREDICTED: probable salt tolerance-like protein At1g78600 [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 4.7e-70
Identity = 138/184 (75.00%), Postives = 145/184 (78.80%), Query Frame = 1


Query: 1   MRTLCDSCESAAAVVFCAADEAALCRSCDEKRNLFLWLL--------------------- 60
           MRTLCD+CESAAA+VFCAADEAALCRSCDEK ++   L                      
Sbjct: 1   MRTLCDACESAAAIVFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPCCDICE 60

Query: 61  ---AFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKV 120
              AFFYCEIDGSSLCLQCDM+VHVGGKRTHKRYLLLRQR EFPGDKPINLD+PSP SKV
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHKRYLLLRQRVEFPGDKPINLDDPSPQSKV 120

Query: 121 PNNIGKGHNQTLPHKVAVEDNQRNHHRLSPVREANDDGHAETDTKMIDLNMKPQRVCGQA 161
           PN IGK HNQ  PHKV VED Q+NHHRLSPVREANDDGHAETDTKMIDLNMKP RV GQA
Sbjct: 121 PNEIGKVHNQPPPHKVTVEDTQQNHHRLSPVREANDDGHAETDTKMIDLNMKPHRVHGQA 180

[Close]

BLAST of CmaCh04G007460 vs. NCBI nr
Match: gi|590702956|ref|XP_007046745.1| (B-box type zinc finger family protein [Theobroma cacao])

HSP 1 Score: 199.9 bits (507), Expect = 3.9e-48
Identity = 109/188 (57.98%), Postives = 129/188 (68.62%), Query Frame = 1


Query: 1   MRTLCDSCESAAAVVFCAADEAALCRSCDEKRNLFLWLL--------------------- 60
           MRTLCDSCESAAA+VFCAADEAALCR+CDEK ++   L                      
Sbjct: 1   MRTLCDSCESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLANPSDVPLCDICE 60

Query: 61  ---AFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKV 120
              AFFYCEIDGSSLCLQCDM+VHVGGKRTH RYLL RQR EFPGDKP N+++P+     
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHARYLLFRQRVEFPGDKPGNVEDPASQPVD 120

Query: 121 PNNIGKGHNQTLPHKVAVEDNQRNHHRLSPVR--EANDDGHAETDTKMIDLNMKPQRVCG 163
           P    +G NQ  P K  V ++Q+N H++S V+  +AN DGH + DTKMIDLNMKP R+ G
Sbjct: 121 PGETRRGQNQ--PAKPTVGESQQN-HKVSSVQLVDANADGHVKMDTKMIDLNMKPHRIHG 180

[Close]

BLAST of CmaCh04G007460 vs. NCBI nr
Match: gi|590685164|ref|XP_007042027.1| (B-box type zinc finger family protein [Theobroma cacao])

HSP 1 Score: 193.4 bits (490), Expect = 3.6e-46
Identity = 108/188 (57.45%), Postives = 124/188 (65.96%), Query Frame = 1


Query: 1   MRTLCDSCESAAAVVFCAADEAALCRSCDEKRNLFLWLL--------------------- 60
           MRTLCD CESAAA++FCAADEAALCRSCDEK ++   L                      
Sbjct: 49  MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLADPSDVPRCDICE 108

Query: 61  ---AFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKV 120
              AFFYCE+DGSSLCLQCDM+VHVGGKRTH RYLLLRQR EFPGDKP  LDE    +  
Sbjct: 109 NAPAFFYCEVDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGRLDELGLQTLD 168

Query: 121 PNNIGKGHNQTLPHKVAVEDNQRNHHRLS--PVREANDDGHAETDTKMIDLNMKPQRVCG 163
           PN + K  NQ  P K+A  +NQ+N HR+S  PV + N DG  +   K+IDLN KPQRV G
Sbjct: 169 PNEVRKDKNQQQP-KLAARENQQN-HRVSPVPVLDGNSDGDGKVGNKLIDLNAKPQRVHG 228

[Close]

BLAST of CmaCh04G007460 vs. NCBI nr
Match: gi|359476640|ref|XP_003631872.1| (PREDICTED: B-box zinc finger protein 19-like isoform X2 [Vitis vinifera])

HSP 1 Score: 191.4 bits (485), Expect = 1.4e-45
Identity = 107/186 (57.53%), Postives = 126/186 (67.74%), Query Frame = 1


Query: 1   MRTLCDSCESAAAVVFCAADEAALCRSCDEKRNLFLWLL--------------------- 60
           MRTLCD CESAAA++FCAADEAALCR CDEK ++   L                      
Sbjct: 1   MRTLCDVCESAAAILFCAADEAALCRVCDEKVHMCNKLASRHVRVGLADPSDVPRCDICE 60

Query: 61  ---AFFYCEIDGSSLCLQCDMVVHVGGKRTHKRYLLLRQRFEFPGDKPINLDEPSPHSKV 120
              AFFYCEIDG+SLCLQCDM+VHVGGKRTH RYLLLRQR EFPGDK  NL++P+     
Sbjct: 61  NAPAFFYCEIDGTSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKSGNLEDPALLPME 120

Query: 121 PNNIGKGHNQTLPHKVAVEDNQRNHHRLSPV--REANDDGHAETDTKMIDLNMKPQRVCG 161
           P    +G NQ+   K  V +NQ+N  R+SPV   +AN DGHA+ DTK+IDLNMKP R+ G
Sbjct: 121 PGENRRGQNQS--SKPTVVENQQN-RRVSPVPTMDANADGHAKMDTKLIDLNMKPHRIHG 180

The following BLAST results are available for this feature:

BLAST of CmaCh04G007460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BBX18_ARATH	1.4e-34	47.83	B-box zinc finger protein 18 OS=Arabidopsis thaliana GN=BBX18 PE=1 SV=2	[more]
BBX19_ARATH	2.7e-33	48.09	B-box zinc finger protein 19 OS=Arabidopsis thaliana GN=BBX19 PE=2 SV=1	[more]
COL3_ARATH	2.8e-06	38.10	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1	[more]
COL1_ARATH	4.8e-06	35.63	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1	[more]
COL4_ARATH	6.3e-06	35.71	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2	[more]

BLAST of CmaCh04G007460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUM1_CUCSA	2.3e-71	75.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047370 PE=4 SV=1	[more]
A0A061DFT8_THECC	2.7e-48	57.98	B-box type zinc finger family protein OS=Theobroma cacao GN=TCM_000244 PE=4 SV=1	[more]
A0A061E6F9_THECC	2.5e-46	57.45	B-box type zinc finger family protein OS=Theobroma cacao GN=TCM_006783 PE=4 SV=1	[more]
A0A0D2QW12_GOSRA	9.7e-46	54.97	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G196900 PE=4 SV=1	[more]
D7SP26_VITVI	9.7e-46	57.53	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03030 PE=4 SV=...	[more]

BLAST of CmaCh04G007460 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21320.1	8.1e-36	47.83	B-box zinc finger family protein	[more]
AT4G38960.3	3.0e-22	45.51	B-box type zinc finger family protein	[more]
AT2G24790.1	1.6e-07	38.10	CONSTANS-like 3	[more]
AT5G15850.1	2.7e-07	35.63	CONSTANS-like 1	[more]
AT5G24930.1	3.5e-07	35.71	CONSTANS-like 4	[more]

BLAST of CmaCh04G007460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457560\|ref\|XP_004146516.1\|	3.3e-71	75.54	PREDICTED: B-box zinc finger protein 18-like [Cucumis sativus]	[more]
gi\|659102302\|ref\|XP_008452057.1\|	4.7e-70	75.00	PREDICTED: probable salt tolerance-like protein At1g78600 [Cucumis melo]	[more]
gi\|590702956\|ref\|XP_007046745.1\|	3.9e-48	57.98	B-box type zinc finger family protein [Theobroma cacao]	[more]
gi\|590685164\|ref\|XP_007042027.1\|	3.6e-46	57.45	B-box type zinc finger family protein [Theobroma cacao]	[more]
gi\|359476640\|ref\|XP_003631872.1\|	1.4e-45	57.53	PREDICTED: B-box zinc finger protein 19-like isoform X2 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000315	Znf_B-box

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008236	serine-type peptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G007460.1	CmaCh04G007460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 20..72 score: 1.
IPR000315	B-box-type zinc finger	PROFILE	PS50119	ZF_BBOX	coord: 1..33 score: 9
None	No IPR available	PANTHER	PTHR31832	FAMILY NOT NAMED	coord: 1..164 score: 5.2
None	No IPR available	PANTHER	PTHR31832:SF5	B-BOX TYPE ZINC FINGER-CONTAINING PROTEIN	coord: 1..164 score: 5.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G007460	Cucsa.106670	Cucumber (Gy14) v1	cgycmaB0246
CmaCh04G007460	Cla014604	Watermelon (97103) v1	cmawmB677
CmaCh04G007460	Csa4G047370	Cucumber (Chinese Long) v2	cmacuB713
CmaCh04G007460	MELO3C016370	Melon (DHL92) v3.5.1	cmameB694
CmaCh04G007460	ClCG07G008310	Watermelon (Charleston Gray)	cmawcgB668
CmaCh04G007460	CSPI04G05650	Wild cucumber (PI 183967)	cmacpiB721
CmaCh04G007460	CmoCh04G007940	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G007460	Lsi07G002670	Bottle gourd (USVL1VR-Ls)	cmalsiB698
CmaCh04G007460	Cp4.1LG01g06700	Cucurbita pepo (Zucchini)	cmacpeB731
CmaCh04G007460	Cp4.1LG14g02000	Cucurbita pepo (Zucchini)	cmacpeB714
CmaCh04G007460	Cp4.1LG19g09030	Cucurbita pepo (Zucchini)	cmacpeB741
CmaCh04G007460	MELO3C016370.2	Melon (DHL92) v3.6.1	cmamedB782
CmaCh04G007460	CsaV3_4G005810	Cucumber (Chinese Long) v3	cmacucB0847
CmaCh04G007460	Cla97C07G135430	Watermelon (97103) v2	cmawmbB774
CmaCh04G007460	Bhi01G001851	Wax gourd	cmawgoB0855
CmaCh04G007460	CsGy4G005520	Cucumber (Gy14) v2	cgybcmaB547
CmaCh04G007460	Carg05728	Silver-seed gourd	carcmaB1414
CmaCh04G007460	Carg14143	Silver-seed gourd	carcmaB1288

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G007460	CmaCh16G006060	Cucurbita maxima (Rimu)	cmacmaB350

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G007460	Wax gourd	cmawgoB0846
CmaCh04G007460	Cucurbita moschata (Rifu)	cmacmoB700
CmaCh04G007460	Cucurbita pepo (Zucchini)	cmacpeB720