Cp4.1LG01g06630 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g06630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Tobamovirus multiplication 1 homolog
Location	Cp4.1LG01 : 16334 .. 21859 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAACAAAACCAAAACACCCGCCATAACCTTAAATTAAACCCAAGCAAATGAATACTTTAGCATCCATCAGCCCATAAGAGAAATCTCTGTTTGCGCGTAGTTTTCCCATCTCACTTTCGGGATCTCTCTATTTTTGCTGCACATTCTGTATTTCCCCAATTTCGTTAAAATGCCGCAACACACCTAGATTATTTGCCCCAAAACGAAGAACCAAGAATATTCACTCACAACACAGCTACATTATTTGCTCGATTGATCGCATTGCTGTTTTCTTTTTCGTCGTTGAATTTCGCGGAGGAACGACGATTCTCTATAATTCGTTTCCACGTGAAAGGGGAGGAGGATTAATGGAGACTAGCAGCGTCGGCATGGATAATTCGCCGGCGAAGGCGTTTTTGTTGATCGACGCAACCACTTGGTGGCAAGAAATCAATGATTCTCTCCTTTGGCAGGATCATATCTTCCTCACCCTTGCCGCTCTTTATGGCATCGTCGCCATCGTCGCTCTTGTAGGCTCCTTCTCTCTGTTTCTATACCCTTCTGTTCCCGTCCTTGTCCTTGTGTTTTCTGTTGTTAATCTCTCGTCGGAATTGAATTTGGGGAATTGGGTTTTTGTTTACTAGACTGAATATTTGATTTTCATGGTGTCCCTTGTTTCTGGTTTCCTTAATTTCGTTGTTGTATTGGGTTATTTGCTCATTGCACATCTAATTCACCTGGACTTGAATATGGGGTTTTATTTAAGGATTTTGTTGTTTCTGATTCATAATCCCTATCTCTGTGCTAGGAAAAGAACGAAGAGCTAGCAAACATGGAGCTTTCTTTGTCATTCTACTTTTGATCCTTAATTGTTTCTTTAGAATGAAAAACTGTAGTGGGGACTCTCTGGTTTTAGGCAATGGAAAAAGAATGGATGAGATAATGAATTCGATTGTATGAATCGTTGTTGGGGTTCTTAAATGTTTAATGTTAGGATGTTTGTGCCTGGTTTTAGGTTCAACTAGTTCGTATACAATTGAGGGTGCCGGAGTATGGTTGGACCACGCAGAAGGTCTTCCATTTTCTCAATTTCTTGGTGAACGGAGGTTTATTTCATCGGTTTTGTTTTTCCTTTTTCCACTTACCTTTTCTTTAATTGTTGTGAGTTCTGTGAATCTCTGGGCTAAGTGATTAAATGTATCTCACTGCAGTGCGGGCAGTCGTTTTTGTATTCCGTCGTGACGTACAGAGTTTGGAACCACCGGTGTGGTTTGGTTCTTAATTGGTTGTTCTGATTTCTTTTTCCTATCACATGTTTAATGTTTCCCTTGTTTGTCTGTCTTAATAGATTCTCCATCATATCTTGCTTGACATGCCAAGCCTTGCCTTCTTCACAACTTATGCTCTATTGGTTTTGTTTTGGGCAGAGATTTACTACCAGGTGGACATTTTTATTTTTGAATTCATAATGTTCTTTTTGCGAATATGGAAAGACTATATATACACACCTTACAAAAACTTTCCTCAGGCACGTGCTGTATCAACTGATGGGTTGAGACCAACTTTCCTTACGGTAAATGCAGTGGTCTATATTATTCAGGTGAGGCTCATTGCTATATCACGATTGAGAGATGAAGAATAGAATATTAGGGGCGAGGAGAGTTCAGGGGAGGAGGTTTGGTCTTTAGCAAGGTTTGACGCCTCATTTTGGGCGTCCATGTTGAAGGAGTTTTGCAATTATTAAGTTAGGTCTTATTATTCTAAATGGTAGCTCTTTCCTAGGCCGCCAAGCTAGGTATCATCAGCCTCCTTTTAGGTGGTTGTTTTGTAGGCCCGTTTTTTATTGGCTCGTGTTTTCGTCCCTTGTTAGCTCTCTTGTCCTCTTTCATCTTTTCTGATTTTTTCATTTTAAAAAAAAATGTGTATCAGGGTGTTGGCTCGTTGTGGCCATTTCAATTAACGACATCAACAATCATTTGATTCATAACACCAGTTATTAATTTCATAATCTAGTGAATATGAGTGAGAATAATGCGTCCTTAAGCATGTTGGATGGTAAAGCAGACCATTGACTCAACGTGTAACTAACCATACATGTGTCGGCTGTATTTTGCATTCTGCCTACTACGTGGATCATTATTCATAGTCAATAGCCAGCATGTTAACCGATTAATATATTTAACCCTTCTTTTTCTAAAAGTTTGATTGAGTTGCTTGCAGATTGTTTTGTGGCTGATATTGTGGTGGAATCCTGTTCATGTTCTGGCCACCCTTTCTAAGATGTTCTTTGCCAGTGTCTCTTTGTTTGCTGCCCTCGGGTTTCTTATTTATGGGGGAAGGTAATATTAGCATCTGCTTTTTCTCTGTTTCTTTATGATTTACATACATTTAAATAATCCTTTTTTCTGTGATGGAGGAGTAAGAAAAAAATCTATGTTTATTGCTTATAGAACCCATACACTACAAGGGAAGTTTGTGATCATGAACTTCTAAACGGGCCTTGTGTTTCTTTAATTGGGGAGTAATTTTGTTAATGGCTGCTGTATTTTAAAGGTATATGTGCCAGATATGATTTATAGCTTAGGGAAGCTGTATATGTCCGAGTAAAAATCCATTTGCCTATAGATTTAATTATTAAAGGTGGAATATAAAGTTGCAGCTCACTGGTCCCCAGTGAGTGGTTCTTCCAGTTGAATAATTTCATTTCTTCCGGTGTTGATGGATACCGGTCATTGAGATTGGAGAACCTGAGATGAATCGGTTGAGACGACCCTAATCAATTCTGAAAAGTTAATGAAGACTTCTAGAAGGGTTTTTTCTTTTTTTGGTGTTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAAGAAACTACTTTCATGAAAGAATACACCAACAGAACATAAGCCAAAGGAACAAGGGAGCCACAACAAAGTTAAAACGAAAGGCTCCTGTCATTTCAAATTTAATCCAGGAAACAGAAAACACTGAGAACCAAAAACGTGGACAGAGCGATTGAAGGCGAGCCATTCTTCAATTGTTCTCTCTGTGTGAGTCGTATGATATTTTCCCCCCTGAAATTCTCAGTTTAATTGGGGTTGGAGAATCCTTTTTTTCCTCAAAACAATTTCAAGGATGGGGGGCAGAATGTAACCTTGCTTTGACCCCAATCTCTACCCTGAAGTTTTTTTTAAAATATTTACAGCACAAGGCTTTTTGTTGGTTATGGACCTTATGGTTAGAAAGTCAACCATAAATAAGTTAGCGTCTTGGCAAGACTTTTTTAAATCTATATTTAAAAATATTAAAGGAGTTAGATTATTCTTATTATTTTTAGGGAAACGGTGCTGTTATAACTACAAATAGTTGAACTTTAGCAATATGCATACTAGCACTGAATTTTAAAGGTTGGAATCCCAAGGTATTTCTAAATTGCGAGGGTTGCTGCAATTATTTGCCTTCATACTTATGAAATTTAAATCCAATGACTAATGGAGATATAGCTATAGGGTATGTAATATTTTCAAATTTTTAGGAGTAATTTTTTAGATTCAAAGTTGGGCGTGACAGTACCAATGTTTAGTTTTGGAGTGGTTTCTTGTTTGCCAAAAATAATTTAAGAGTTGAGGAAGGTTCACTTTTCTTGTCATATGATAACCCTTTTCGTGCAGAATTATTAAATCATGTGATCTTCAGTAGTTTTCACTTCCGTTGGCTTTTCTCTTTTGGTGCACTATTGGCATCTGGCAGACTTGGAAATTCCCTGTCTGTGACATTACTTGTAATTTGCTAATGGTTACTTTAACTGTCTCTGGGTAGATTGTTCTTGATGTTACAGCGCTTTCCTGTGGAATCCAAAGGAAGACGTAAGAAGTTGCAAGAGGTAGGATGTTATAGACTTCTTTTTAGAATTTTGATTCGTTTTAATCTTTCCCATAGATTCTCTCTTTTAACTTTTATTTGTTTTGGGTGGGACAGGTTGGCTATGTGACAACTATATGTTTTTCTTGTTTCCTCGTCAGATGCATCATGGTGAGTTTACTTCTCTCCAATGTTGTTATGCTGTACCATTGGGAGTGATTGCATTAGATATTCTGCCTTGTAGAGTTAGTATGTTATCATACTTACAATCGGTGTGTAGAACAAACATCTCGCTCATTATGATTGATCAAATTTTTAAAAATATTTGTGACAAGTTTAAGAAGTTGGACAATTGTAATTTATAATGGAGGTGCTAACTATTATAATCAGCTTTTGTTACTTGATGTGCATGAAAATTAGCATAGAATAATGTTTTAATAAGATATGAAGACAAGCAACTCAAGAAGGTTAGTTGTATCGGCGGTTACCTACATGTTTTACCGCACCAGTAACTAGGCCGGGCCTGGGTATTATAATGAACTTCAAATTCATTTTCGTTTGGGTCCTTAACCAATCATCAAGGAAAGCCTAACGCCGTCCTCAAGGATTAAGCATAACGTAATAGAGTTACATATAGGCTTATCCTTGTAGCTATTACTTGTGTATTATTTAATCGCTGTTTTATGCATATACTATACAGTGAAATGAACAACATGTTGTTTTGCCTTTCAATTGCTTTATATTCATACTCATTCGTTTTAATCTTGGTTTAATTTTCTTGCGCTGTAGATGTGCTTTAATGCTTTTGATCAAGCTGCAGACCTTGATGTTTTGGATCATCCTGTTCTAAATTTTATATACTACCTGGTAAATTCGGATTTACCTATGTTATTTCGCTTGTGGTTGTTTGTATTACTAGTCAATTGGGGTATTCTAATCAATATGATGAGTTTCCTGCATTCTATTAGTGTTCTATGATGATGAATTTAGTTCAAGTCTCAACGTTAAGCTTGGGACTTGGTGCCTTTTCATAAAGGTGAAGCCTTACCCTTAAAATTATAATATTCTCCTCGATGGGAGATGGGTTATTCTTTGAACGGAATACGTTGTTCCTTAGTATTTTCTACTTCTTTTTGTTCAGGAAAATGTGGAACGTCATTCTCTTTCAAAAGTATGAGTTCTTACTTGTGTTTCCATGTATGCAGTTGGTTGAGATTTTACCTTCTTCTCTGGTCCTCTTCATTCTGAGAAAGCTGCCTCCCAAACGAGGAATTACGCAGTACCATCCTATCCGCTGAAAGGGTTGAGGAAGAAAAAGAAAGTGTGGTCAAGGTTTCAACTTCTTGCATCAGAAGGAAGCGGAAGAATTGGGAATGAAAAGGTACATGCTTTCTAGGGAAACATGCCTGAGGCATTTGGAGTTGTGTTTAAATAGAAATGAAGAGGTACAGGCCCGAGATTAGTGTTGGTGTGGCATATGATTTAACCTAACTCGCTGGATCTCTTGTTGTTGCCTTTTTGGTTCAATAATAGCAAGAGAAACAGTGACATTTCTAAATGCTTTTCCCTGTATATATACCCAACAATTGCATCTGAATTCTGCTTTTATAACTCATGCTCTATGACTCGTTAATTTTTTGCGACAAAAGCCATTAGAGGCGGAGGAATTCAAACCCAAGACT

mRNA sequence

AAAAACAAAACCAAAACACCCGCCATAACCTTAAATTAAACCCAAGCAAATGAATACTTTAGCATCCATCAGCCCATAAGAGAAATCTCTGTTTGCGCGTAGTTTTCCCATCTCACTTTCGGGATCTCTCTATTTTTGCTGCACATTCTGTATTTCCCCAATTTCGTTAAAATGCCGCAACACACCTAGATTATTTGCCCCAAAACGAAGAACCAAGAATATTCACTCACAACACAGCTACATTATTTGCTCGATTGATCGCATTGCTGTTTTCTTTTTCGTCGTTGAATTTCGCGGAGGAACGACGATTCTCTATAATTCGTTTCCACGTGAAAGGGGAGGAGGATTAATGGAGACTAGCAGCGTCGGCATGGATAATTCGCCGGCGAAGGCGTTTTTGTTGATCGACGCAACCACTTGGTGGCAAGAAATCAATGATTCTCTCCTTTGGCAGGATCATATCTTCCTCACCCTTGCCGCTCTTTATGGCATCGTCGCCATCGTCGCTCTTGTTCAACTAGTTCGTATACAATTGAGGGTGCCGGAGTATGGTTGGACCACGCAGAAGGTCTTCCATTTTCTCAATTTCTTGGTGAACGGAGTGCGGGCAGTCGTTTTTGTATTCCGTCGTGACGTACAGAGTTTGGAACCACCGATTCTCCATCATATCTTGCTTGACATGCCAAGCCTTGCCTTCTTCACAACTTATGCTCTATTGGTTTTGTTTTGGGCAGAGATTTACTACCAGGCACGTGCTGTATCAACTGATGGGTTGAGACCAACTTTCCTTACGATTGTTTTGTGGCTGATATTGTGGTGGAATCCTGTTCATGTTCTGGCCACCCTTTCTAAGATGTTCTTTGCCAGTGTCTCTTTGTTTGCTGCCCTCGGGTTTCTTATTTATGGGGGAAGATTGTTCTTGATGTTACAGCGCTTTCCTGTGGAATCCAAAGGAAGACGTAAGAAGTTGCAAGAGGTTGGCTATGTGACAACTATATGTTTTTCTTGTTTCCTCGTCAGATGCATCATGATGTGCTTTAATGCTTTTGATCAAGCTGCAGACCTTGATGTTTTGGATCATCCTGTTCTAAATTTTATATACTACCTGTTGGTTGAGATTTTACCTTCTTCTCTGGTCCTCTTCATTCTGAGAAAGCTGCCTCCCAAACGAGGAATTACGCAGTACCATCCTATCCGCTGAAAGGGTTGAGGAAGAAAAAGAAAGTGTGGTCAAGGTTTCAACTTCTTGCATCAGAAGGAAGCGGAAGAATTGGGAATGAAAAGGTACATGCTTTCTAGGGAAACATGCCTGAGGCATTTGGAGTTGTGTTTAAATAGAAATGAAGAGGTACAGGCCCGAGATTAGTGTTGGTGTGGCATATGATTTAACCTAACTCGCTGGATCTCTTGTTGTTGCCTTTTTGGTTCAATAATAGCAAGAGAAACAGTGACATTTCTAAATGCTTTTCCCTGTATATATACCCAACAATTGCATCTGAATTCTGCTTTTATAACTCATGCTCTATGACTCGTTAATTTTTTGCGACAAAAGCCATTAGAGGCGGAGGAATTCAAACCCAAGACT

Coding sequence (CDS)

ATGGAGACTAGCAGCGTCGGCATGGATAATTCGCCGGCGAAGGCGTTTTTGTTGATCGACGCAACCACTTGGTGGCAAGAAATCAATGATTCTCTCCTTTGGCAGGATCATATCTTCCTCACCCTTGCCGCTCTTTATGGCATCGTCGCCATCGTCGCTCTTGTTCAACTAGTTCGTATACAATTGAGGGTGCCGGAGTATGGTTGGACCACGCAGAAGGTCTTCCATTTTCTCAATTTCTTGGTGAACGGAGTGCGGGCAGTCGTTTTTGTATTCCGTCGTGACGTACAGAGTTTGGAACCACCGATTCTCCATCATATCTTGCTTGACATGCCAAGCCTTGCCTTCTTCACAACTTATGCTCTATTGGTTTTGTTTTGGGCAGAGATTTACTACCAGGCACGTGCTGTATCAACTGATGGGTTGAGACCAACTTTCCTTACGATTGTTTTGTGGCTGATATTGTGGTGGAATCCTGTTCATGTTCTGGCCACCCTTTCTAAGATGTTCTTTGCCAGTGTCTCTTTGTTTGCTGCCCTCGGGTTTCTTATTTATGGGGGAAGATTGTTCTTGATGTTACAGCGCTTTCCTGTGGAATCCAAAGGAAGACGTAAGAAGTTGCAAGAGGTTGGCTATGTGACAACTATATGTTTTTCTTGTTTCCTCGTCAGATGCATCATGATGTGCTTTAATGCTTTTGATCAAGCTGCAGACCTTGATGTTTTGGATCATCCTGTTCTAAATTTTATATACTACCTGTTGGTTGAGATTTTACCTTCTTCTCTGGTCCTCTTCATTCTGAGAAAGCTGCCTCCCAAACGAGGAATTACGCAGTACCATCCTATCCGCTGA

Protein sequence

METSSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDGLRPTFLTIVLWLILWWNPVHVLATLSKMFFASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR

Homology

[Close]

BLAST of Cp4.1LG01g06630 vs. Swiss-Prot
Match: TOM3_TOBAC (Tobamovirus multiplication protein 3 OS=Nicotiana tabacum GN=TOM3 PE=1 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 6.4e-127
Identity = 227/287 (79.09%), Postives = 248/287 (86.41%), Query Frame = 1


Query: 6   VGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVP 65
           VG   + A   L  +A +WW+E+N S  WQD +F  LA LYGIV+ VALVQL+RIQ+RVP
Sbjct: 8   VGPSAAAAAYHLKNEAISWWEEVNRSRAWQDRLFHVLAILYGIVSAVALVQLIRIQMRVP 67

Query: 66  EYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVL 125
           EYGWTTQKVFHFLNFLVNGVR++VF FRRDVQ L P I+ HILLDMPSLAFFTTYALLVL
Sbjct: 68  EYGWTTQKVFHFLNFLVNGVRSLVFAFRRDVQKLHPEIVQHILLDMPSLAFFTTYALLVL 127

Query: 126 FWAEIYYQARAVSTDGLRPTFLTI---------VLWLILWWNPVHVLATLSKMFFASVSL 185
           FWAEIYYQARAVSTDGLRP+F TI         +LWLI+WW PV VL  LSKMFFA VSL
Sbjct: 128 FWAEIYYQARAVSTDGLRPSFFTINGVVYVIQIILWLIIWWKPVRVLVILSKMFFAGVSL 187

Query: 186 FAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQA 245
           FAALGFL+YGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFL+RC+MMCFNAF++A
Sbjct: 188 FAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFNKA 247

Query: 246 ADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           ADLDVLDHP+LN IYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Sbjct: 248 ADLDVLDHPILNLIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 294

[Close]

BLAST of Cp4.1LG01g06630 vs. Swiss-Prot
Match: THH1_ARATH (Protein TOM THREE HOMOLOG 1 OS=Arabidopsis thaliana GN=THH1 PE=2 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 2.4e-126
Identity = 221/285 (77.54%), Postives = 250/285 (87.72%), Query Frame = 1


Query: 8   MDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEY 67
           M +S   AF L +   WW ++N+S +WQD IF  LA LYGIV+++A++QLVRIQLRVPEY
Sbjct: 9   MSSSAIVAFNLKEGKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEY 68

Query: 68  GWTTQKVFHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFW 127
           GWTTQKVFHFLNF+VNGVRA+VF+FRRD Q+++P IL HILLD+PSLAFFTTYALLVLFW
Sbjct: 69  GWTTQKVFHFLNFMVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFW 128

Query: 128 AEIYYQARAVSTDGLRPTFLTI---------VLWLILWWNPVHVLATLSKMFFASVSLFA 187
           AEIYYQARAVSTDGLRP+F TI          LWL+LWW PVH++  +SKMFFA VSLFA
Sbjct: 129 AEIYYQARAVSTDGLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFA 188

Query: 188 ALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAAD 247
           ALGFL+YGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RCIMMCF+AFD AAD
Sbjct: 189 ALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAAD 248

Query: 248 LDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           LDVLDHP+LNFIYYLLVEILPSSLVLFILRKLPPKRGITQYH I+
Sbjct: 249 LDVLDHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293

[Close]

BLAST of Cp4.1LG01g06630 vs. Swiss-Prot
Match: TOM3_ARATH (Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2)

HSP 1 Score: 448.7 bits (1153), Expect = 4.6e-125
Identity = 222/283 (78.45%), Postives = 248/283 (87.63%), Query Frame = 1


Query: 10  NSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEYGW 69
           +S  +   L +A+ WW ++N+S +WQD IF  LA LYGIV++VA++QLVRIQLRVPEYGW
Sbjct: 21  SSAVEMLNLKEASNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGW 80

Query: 70  TTQKVFHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFWAE 129
           TTQKVFHFLNF+VNGVRAVVFVFRR+VQ ++P IL HILLD+PSLAFFTTYALLVLFWAE
Sbjct: 81  TTQKVFHFLNFVVNGVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAE 140

Query: 130 IYYQARAVSTDGLRPTFLTI---------VLWLILWWNPVHVLATLSKMFFASVSLFAAL 189
           IYYQARAVSTDGLRP+F TI          LWL+LWW PV V+  LSKMFFA VSLFAAL
Sbjct: 141 IYYQARAVSTDGLRPSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAAL 200

Query: 190 GFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAADLD 249
           GFL+YGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RCIMMCF AFD+ A+LD
Sbjct: 201 GFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLD 260

Query: 250 VLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           VLDHP+LNFIYYLLVEILPSSLVLFILRKLPPKRGITQYH IR
Sbjct: 261 VLDHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHQIR 303

[Close]

BLAST of Cp4.1LG01g06630 vs. Swiss-Prot
Match: TOM1_TOBAC (Tobamovirus multiplication protein 1 OS=Nicotiana tabacum GN=TOM1 PE=1 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 9.6e-91
Identity = 166/270 (61.48%), Postives = 206/270 (76.30%), Query Frame = 1


Query: 22  TTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEYGWTTQKVFHFLNFL 81
           T WW +IN+S+ WQD IF +L A Y +V+ VAL+QL+RI+LRVPEYGWTTQKVFH +NF+
Sbjct: 18  TNWWDQINESVQWQDGIFYSLCASYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNFV 77

Query: 82  VNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDG 141
           VNGVRA+VF F + V    P +L   +LD+P L FF+T+ LLVLFWAEIY+QAR++ TD 
Sbjct: 78  VNGVRAIVFGFHKQVFLFHPKVLSLAILDLPGLLFFSTFTLLVLFWAEIYHQARSLPTDK 137

Query: 142 LRPTFLTI---------VLWLILWWNPVHVLATLSKMFFASVSLFAALGFLIYGGRLFLM 201
           LR ++++I          +W+ LW N    +  + K+F A VS  AALGFL+YGGRLFLM
Sbjct: 138 LRISYISINGAIYFIQACIWVYLWSNDNSTVEFIGKIFIAVVSFIAALGFLLYGGRLFLM 197

Query: 202 LQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAADLDVLDHPVLNFIYY 261
           L+RFP+ESKGRRKKL EVG VT ICF+CFL+ C ++  +AFD  A LDVLDHPVLN IYY
Sbjct: 198 LRRFPIESKGRRKKLHEVGSVTAICFTCFLISCFVVVLSAFDPDASLDVLDHPVLNLIYY 257

Query: 262 LLVEILPSSLVLFILRKLPPKRGITQYHPI 283
           LLVEILPS+LVL+ILRKLPPKR   QYHPI
Sbjct: 258 LLVEILPSALVLYILRKLPPKRVSAQYHPI 287

[Close]

BLAST of Cp4.1LG01g06630 vs. Swiss-Prot
Match: TOM1_ARATH (Tobamovirus multiplication protein 1 OS=Arabidopsis thaliana GN=TOM1 PE=1 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 5.3e-89
Identity = 162/271 (59.78%), Postives = 204/271 (75.28%), Query Frame = 1


Query: 22  TTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEYGWTTQKVFHFLNFL 81
           T+WW ++N+S  WQD IF  L   Y +V+ VALVQL+RIQ+RVPEYGWTTQKVFH +NF+
Sbjct: 21  TSWWDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWTTQKVFHLMNFV 80

Query: 82  VNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDG 141
           VNGVRAV+F F   V  + P  L  +LLD+P L FF+ Y LLVLFWAEIY+QAR++ TD 
Sbjct: 81  VNGVRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEIYHQARSLPTDK 140

Query: 142 LRPTFLT---------IVLWLILWWNPVHVLATLSKMFFASVSLFAALGFLIYGGRLFLM 201
           LR T+++         I +W  +W +    +  + K+F A VS  AALGFL+YGGRLF M
Sbjct: 141 LRITYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALGFLLYGGRLFFM 200

Query: 202 LQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAADLDVLDHPVLNFIYY 261
           L+RFP+ESKGRRKKL EVG VT ICF+CFL+RC+++  +AFD+   LDVLDHPVLN IYY
Sbjct: 201 LRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDVLDHPVLNLIYY 260

Query: 262 LLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           ++VE+LPS+LVLFILRKLPPKR   QYHPI+
Sbjct: 261 MVVEVLPSALVLFILRKLPPKRVSAQYHPIQ 291

[Close]

BLAST of Cp4.1LG01g06630 vs. TrEMBL
Match: A0A0A0KMG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G264280 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 1.5e-143
Identity = 262/292 (89.73%), Postives = 271/292 (92.81%), Query Frame = 1


Query: 1   METSSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRI 60
           METSS+G+DNS   AFLL DAT+WWQEIN S LWQD IF TLAALYG+V IVALVQL+RI
Sbjct: 1   METSSLGIDNSGVPAFLLTDATSWWQEINYSHLWQDRIFFTLAALYGLVGIVALVQLIRI 60

Query: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTY 120
           QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQ+LEPPIL HILLDMPSLAFFTTY
Sbjct: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQNLEPPILQHILLDMPSLAFFTTY 120

Query: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLT---------IVLWLILWWNPVHVLATLSKMFF 180
           ALLVLFWAEIYYQARAVSTDGLRPTFLT         IVLWL+LWWNPVHVLA LSKMFF
Sbjct: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYVIQIVLWLVLWWNPVHVLAILSKMFF 180

Query: 181 ASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240
           A VSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN
Sbjct: 181 ACVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240

Query: 241 AFDQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           AFDQAADLDVLDHPVLNFIYYLLVEI+PSS+VLFILRKLPPKRGITQYHPIR
Sbjct: 241 AFDQAADLDVLDHPVLNFIYYLLVEIVPSSMVLFILRKLPPKRGITQYHPIR 292

[Close]

BLAST of Cp4.1LG01g06630 vs. TrEMBL
Match: Q402E9_CUCME (Tobamovirus multiplication 1 homolog OS=Cucumis melo GN=CmTH1 PE=2 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 2.0e-143
Identity = 262/292 (89.73%), Postives = 270/292 (92.47%), Query Frame = 1


Query: 1   METSSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRI 60
           METSS+G+DNS   AFLL D T+WWQEIN S LWQD IF TLAALYG+V IVALVQLVRI
Sbjct: 1   METSSLGIDNSGVPAFLLTDGTSWWQEINYSRLWQDRIFFTLAALYGVVGIVALVQLVRI 60

Query: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTY 120
           QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQ+LEPPIL HILLDMPSLAFFTTY
Sbjct: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQNLEPPILQHILLDMPSLAFFTTY 120

Query: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLT---------IVLWLILWWNPVHVLATLSKMFF 180
           ALLVLFWAEIYYQARAVSTDGLRPTFLT         IVLWL+LWWNPVHVLA LSKMFF
Sbjct: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYVIQIVLWLVLWWNPVHVLAILSKMFF 180

Query: 181 ASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240
           A VSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN
Sbjct: 181 ACVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240

Query: 241 AFDQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           AFDQAADLDVLDHPVLNFIYYLLVEI+PSS+VLFILRKLPPKRGITQYHPIR
Sbjct: 241 AFDQAADLDVLDHPVLNFIYYLLVEIVPSSMVLFILRKLPPKRGITQYHPIR 292

[Close]

BLAST of Cp4.1LG01g06630 vs. TrEMBL
Match: M5XYR5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009358mg PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 6.9e-128
Identity = 232/289 (80.28%), Postives = 253/289 (87.54%), Query Frame = 1


Query: 4   SSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLR 63
           SSVG+  S  KA+ L DA+ WW ++NDS +WQD IF  LA LYG+VAIVALVQL+RIQLR
Sbjct: 8   SSVGLVQSAVKAYNLRDASNWWHDVNDSPIWQDRIFHALALLYGLVAIVALVQLIRIQLR 67

Query: 64  VPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALL 123
           VPEYGWTTQKVFHFLNF+VN VRA VF+FRR VQ L P I+ HILLDMPSLAFFTTYALL
Sbjct: 68  VPEYGWTTQKVFHFLNFVVNAVRAAVFIFRRQVQKLHPEIVKHILLDMPSLAFFTTYALL 127

Query: 124 VLFWAEIYYQARAVSTDGLRPTFLTI---------VLWLILWWNPVHVLATLSKMFFASV 183
           VLFWAEIYYQARAVSTDGLRP+F TI          +WLILWW P+ VL  L+KMFFA V
Sbjct: 128 VLFWAEIYYQARAVSTDGLRPSFFTINAVVYVIQIAMWLILWWKPIPVLLILAKMFFAGV 187

Query: 184 SLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFD 243
           SLFAA+GFL+YGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICF+CFLVRCIMMCFNAFD
Sbjct: 188 SLFAAVGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFACFLVRCIMMCFNAFD 247

Query: 244 QAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           +AADLDVL+HP+LNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Sbjct: 248 KAADLDVLNHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 296

[Close]

BLAST of Cp4.1LG01g06630 vs. TrEMBL
Match: A0A0K9QZ13_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_124640 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.2e-127
Identity = 232/278 (83.45%), Postives = 249/278 (89.57%), Query Frame = 1


Query: 15  AFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEYGWTTQKV 74
           AFLL DA+ WW  INDSLLWQD IF  L+ LYGIV++VALVQLVRIQLRVPEYGWTTQKV
Sbjct: 13  AFLLKDASNWWNNINDSLLWQDRIFHVLSILYGIVSVVALVQLVRIQLRVPEYGWTTQKV 72

Query: 75  FHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFWAEIYYQA 134
           FHFLNFLVNGVR VVFVFRRDVQ L+P I+ H+LLD+PSLAFFTTYALLVLFWAEIYYQA
Sbjct: 73  FHFLNFLVNGVRCVVFVFRRDVQLLQPEIVQHVLLDLPSLAFFTTYALLVLFWAEIYYQA 132

Query: 135 RAVSTDGLRPTFLTI---------VLWLILWWNPVHVLATLSKMFFASVSLFAALGFLIY 194
           RAVSTDGLRP+F TI          LWLILWW P+ VL  LSKMFFA VSLFAALGFL+Y
Sbjct: 133 RAVSTDGLRPSFFTINAVVYIIQIALWLILWWKPIPVLVILSKMFFAGVSLFAALGFLLY 192

Query: 195 GGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAADLDVLDHP 254
           GGRLFLMLQRFPVESKGRRKKLQEVGYVTTICF+CFLVRC+MMCFNAFD+AADLDVLDHP
Sbjct: 193 GGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCVMMCFNAFDKAADLDVLDHP 252

Query: 255 VLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           VLNF+YYLLVEI+PS+LVLFILRKLPPKRGITQYH IR
Sbjct: 253 VLNFMYYLLVEIVPSTLVLFILRKLPPKRGITQYHQIR 290

[Close]

BLAST of Cp4.1LG01g06630 vs. TrEMBL
Match: A0A0J8CAT0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g132160 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 4.5e-127
Identity = 232/278 (83.45%), Postives = 247/278 (88.85%), Query Frame = 1


Query: 15  AFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEYGWTTQKV 74
           AFL+ DA+ WW  INDS LWQD IF  L+ LYGIV+ +ALVQLVRIQLRVPEYGWTTQKV
Sbjct: 13  AFLMKDASNWWNNINDSHLWQDRIFHILSILYGIVSAIALVQLVRIQLRVPEYGWTTQKV 72

Query: 75  FHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFWAEIYYQA 134
           FHFLNFLVNGVR VVFVFRRDVQ LEP I+ H+LLD+PSLAFFTTYALLVLFWAEIYYQA
Sbjct: 73  FHFLNFLVNGVRCVVFVFRRDVQLLEPEIVQHMLLDLPSLAFFTTYALLVLFWAEIYYQA 132

Query: 135 RAVSTDGLRPTFLTI---------VLWLILWWNPVHVLATLSKMFFASVSLFAALGFLIY 194
           RAVSTDGLRP+F TI          LWLILWW P+ VL  LSKMFFA VSLFAALGFL+Y
Sbjct: 133 RAVSTDGLRPSFYTINAVVYAIQFALWLILWWKPIPVLVILSKMFFAGVSLFAALGFLLY 192

Query: 195 GGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAADLDVLDHP 254
           GGRLFLMLQRFPVESKGRRKKLQEVGYVTTICF CFLVRC+MMCFNAFD+AADLDVLDHP
Sbjct: 193 GGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFLCFLVRCVMMCFNAFDKAADLDVLDHP 252

Query: 255 VLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           +LNF+YYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Sbjct: 253 ILNFMYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 290

[Close]

BLAST of Cp4.1LG01g06630 vs. TAIR10
Match: AT1G14530.1 (AT1G14530.1 Protein of unknown function (DUF1084))

HSP 1 Score: 453.0 bits (1164), Expect = 1.4e-127
Identity = 221/285 (77.54%), Postives = 250/285 (87.72%), Query Frame = 1


Query: 8   MDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEY 67
           M +S   AF L +   WW ++N+S +WQD IF  LA LYGIV+++A++QLVRIQLRVPEY
Sbjct: 9   MSSSAIVAFNLKEGKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEY 68

Query: 68  GWTTQKVFHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFW 127
           GWTTQKVFHFLNF+VNGVRA+VF+FRRD Q+++P IL HILLD+PSLAFFTTYALLVLFW
Sbjct: 69  GWTTQKVFHFLNFMVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFW 128

Query: 128 AEIYYQARAVSTDGLRPTFLTI---------VLWLILWWNPVHVLATLSKMFFASVSLFA 187
           AEIYYQARAVSTDGLRP+F TI          LWL+LWW PVH++  +SKMFFA VSLFA
Sbjct: 129 AEIYYQARAVSTDGLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFA 188

Query: 188 ALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAAD 247
           ALGFL+YGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RCIMMCF+AFD AAD
Sbjct: 189 ALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAAD 248

Query: 248 LDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           LDVLDHP+LNFIYYLLVEILPSSLVLFILRKLPPKRGITQYH I+
Sbjct: 249 LDVLDHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293

[Close]

BLAST of Cp4.1LG01g06630 vs. TAIR10
Match: AT2G02180.1 (AT2G02180.1 tobamovirus multiplication protein 3)

HSP 1 Score: 448.7 bits (1153), Expect = 2.6e-126
Identity = 222/283 (78.45%), Postives = 248/283 (87.63%), Query Frame = 1


Query: 10  NSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEYGW 69
           +S  +   L +A+ WW ++N+S +WQD IF  LA LYGIV++VA++QLVRIQLRVPEYGW
Sbjct: 21  SSAVEMLNLKEASNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGW 80

Query: 70  TTQKVFHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFWAE 129
           TTQKVFHFLNF+VNGVRAVVFVFRR+VQ ++P IL HILLD+PSLAFFTTYALLVLFWAE
Sbjct: 81  TTQKVFHFLNFVVNGVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAE 140

Query: 130 IYYQARAVSTDGLRPTFLTI---------VLWLILWWNPVHVLATLSKMFFASVSLFAAL 189
           IYYQARAVSTDGLRP+F TI          LWL+LWW PV V+  LSKMFFA VSLFAAL
Sbjct: 141 IYYQARAVSTDGLRPSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAAL 200

Query: 190 GFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAADLD 249
           GFL+YGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RCIMMCF AFD+ A+LD
Sbjct: 201 GFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLD 260

Query: 250 VLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           VLDHP+LNFIYYLLVEILPSSLVLFILRKLPPKRGITQYH IR
Sbjct: 261 VLDHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHQIR 303

[Close]

BLAST of Cp4.1LG01g06630 vs. TAIR10
Match: AT4G21790.1 (AT4G21790.1 tobamovirus multiplication 1)

HSP 1 Score: 328.9 bits (842), Expect = 3.0e-90
Identity = 162/271 (59.78%), Postives = 204/271 (75.28%), Query Frame = 1


Query: 22  TTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEYGWTTQKVFHFLNFL 81
           T+WW ++N+S  WQD IF  L   Y +V+ VALVQL+RIQ+RVPEYGWTTQKVFH +NF+
Sbjct: 21  TSWWDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWTTQKVFHLMNFV 80

Query: 82  VNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDG 141
           VNGVRAV+F F   V  + P  L  +LLD+P L FF+ Y LLVLFWAEIY+QAR++ TD 
Sbjct: 81  VNGVRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEIYHQARSLPTDK 140

Query: 142 LRPTFLT---------IVLWLILWWNPVHVLATLSKMFFASVSLFAALGFLIYGGRLFLM 201
           LR T+++         I +W  +W +    +  + K+F A VS  AALGFL+YGGRLF M
Sbjct: 141 LRITYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALGFLLYGGRLFFM 200

Query: 202 LQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAADLDVLDHPVLNFIYY 261
           L+RFP+ESKGRRKKL EVG VT ICF+CFL+RC+++  +AFD+   LDVLDHPVLN IYY
Sbjct: 201 LRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDVLDHPVLNLIYY 260

Query: 262 LLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           ++VE+LPS+LVLFILRKLPPKR   QYHPI+
Sbjct: 261 MVVEVLPSALVLFILRKLPPKRVSAQYHPIQ 291

[Close]

BLAST of Cp4.1LG01g06630 vs. NCBI nr
Match: gi|449445290|ref|XP_004140406.1| (PREDICTED: protein TOM THREE HOMOLOG 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 516.9 bits (1330), Expect = 2.2e-143
Identity = 262/292 (89.73%), Postives = 271/292 (92.81%), Query Frame = 1


Query: 1   METSSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRI 60
           METSS+G+DNS   AFLL DAT+WWQEIN S LWQD IF TLAALYG+V IVALVQL+RI
Sbjct: 1   METSSLGIDNSGVPAFLLTDATSWWQEINYSHLWQDRIFFTLAALYGLVGIVALVQLIRI 60

Query: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTY 120
           QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQ+LEPPIL HILLDMPSLAFFTTY
Sbjct: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQNLEPPILQHILLDMPSLAFFTTY 120

Query: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLT---------IVLWLILWWNPVHVLATLSKMFF 180
           ALLVLFWAEIYYQARAVSTDGLRPTFLT         IVLWL+LWWNPVHVLA LSKMFF
Sbjct: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYVIQIVLWLVLWWNPVHVLAILSKMFF 180

Query: 181 ASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240
           A VSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN
Sbjct: 181 ACVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240

Query: 241 AFDQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           AFDQAADLDVLDHPVLNFIYYLLVEI+PSS+VLFILRKLPPKRGITQYHPIR
Sbjct: 241 AFDQAADLDVLDHPVLNFIYYLLVEIVPSSMVLFILRKLPPKRGITQYHPIR 292

[Close]

BLAST of Cp4.1LG01g06630 vs. NCBI nr
Match: gi|661902915|ref|NP_001284434.1| (protein TOM THREE HOMOLOG 1 [Cucumis melo])

HSP 1 Score: 516.5 bits (1329), Expect = 2.9e-143
Identity = 262/292 (89.73%), Postives = 270/292 (92.47%), Query Frame = 1


Query: 1   METSSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRI 60
           METSS+G+DNS   AFLL D T+WWQEIN S LWQD IF TLAALYG+V IVALVQLVRI
Sbjct: 1   METSSLGIDNSGVPAFLLTDGTSWWQEINYSRLWQDRIFFTLAALYGVVGIVALVQLVRI 60

Query: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTY 120
           QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQ+LEPPIL HILLDMPSLAFFTTY
Sbjct: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQNLEPPILQHILLDMPSLAFFTTY 120

Query: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLT---------IVLWLILWWNPVHVLATLSKMFF 180
           ALLVLFWAEIYYQARAVSTDGLRPTFLT         IVLWL+LWWNPVHVLA LSKMFF
Sbjct: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYVIQIVLWLVLWWNPVHVLAILSKMFF 180

Query: 181 ASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240
           A VSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN
Sbjct: 181 ACVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240

Query: 241 AFDQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           AFDQAADLDVLDHPVLNFIYYLLVEI+PSS+VLFILRKLPPKRGITQYHPIR
Sbjct: 241 AFDQAADLDVLDHPVLNFIYYLLVEIVPSSMVLFILRKLPPKRGITQYHPIR 292

[Close]

BLAST of Cp4.1LG01g06630 vs. NCBI nr
Match: gi|778701775|ref|XP_011655086.1| (PREDICTED: protein TOM THREE HOMOLOG 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 468.4 bits (1204), Expect = 8.9e-129
Identity = 244/292 (83.56%), Postives = 253/292 (86.64%), Query Frame = 1


Query: 1   METSSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRI 60
           METSS+G+DNS   AFLL DAT+WWQEIN S LWQD IF TLAALYG+V IVALVQL+RI
Sbjct: 1   METSSLGIDNSGVPAFLLTDATSWWQEINYSHLWQDRIFFTLAALYGLVGIVALVQLIRI 60

Query: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTY 120
           QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQ+LEPPIL HILLDMPSLAFFTTY
Sbjct: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQNLEPPILQHILLDMPSLAFFTTY 120

Query: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLT---------IVLWLILWWNPVHVLATLSKMFF 180
           ALLVLFWAEIYYQARAVSTDGLRPTFLT         IVLWL+LWWNPVHVLA LSKMFF
Sbjct: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYVIQIVLWLVLWWNPVHVLAILSKMFF 180

Query: 181 ASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240
           A VSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE                  MCFN
Sbjct: 181 ACVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFN 240

Query: 241 AFDQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           AFDQAADLDVLDHPVLNFIYYLLVEI+PSS+VLFILRKLPPKRGITQYHPIR
Sbjct: 241 AFDQAADLDVLDHPVLNFIYYLLVEIVPSSMVLFILRKLPPKRGITQYHPIR 274

[Close]

BLAST of Cp4.1LG01g06630 vs. NCBI nr
Match: gi|659120519|ref|XP_008460232.1| (PREDICTED: protein TOM THREE HOMOLOG 1 isoform X2 [Cucumis melo])

HSP 1 Score: 468.0 bits (1203), Expect = 1.2e-128
Identity = 244/292 (83.56%), Postives = 252/292 (86.30%), Query Frame = 1


Query: 1   METSSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRI 60
           METSS+G+DNS   AFLL D T+WWQEIN S LWQD IF TLAALYG+V IVALVQLVRI
Sbjct: 1   METSSLGIDNSGVPAFLLTDGTSWWQEINYSRLWQDRIFFTLAALYGVVGIVALVQLVRI 60

Query: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTY 120
           QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQ+LEPPIL HILLDMPSLAFFTTY
Sbjct: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQNLEPPILQHILLDMPSLAFFTTY 120

Query: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLT---------IVLWLILWWNPVHVLATLSKMFF 180
           ALLVLFWAEIYYQARAVSTDGLRPTFLT         IVLWL+LWWNPVHVLA LSKMFF
Sbjct: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYVIQIVLWLVLWWNPVHVLAILSKMFF 180

Query: 181 ASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240
           A VSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE                  MCFN
Sbjct: 181 ACVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFN 240

Query: 241 AFDQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           AFDQAADLDVLDHPVLNFIYYLLVEI+PSS+VLFILRKLPPKRGITQYHPIR
Sbjct: 241 AFDQAADLDVLDHPVLNFIYYLLVEIVPSSMVLFILRKLPPKRGITQYHPIR 274

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BLAST of Cp4.1LG01g06630 vs. NCBI nr
Match: gi|645228447|ref|XP_008221000.1| (PREDICTED: protein TOM THREE HOMOLOG 1 [Prunus mume])

HSP 1 Score: 466.8 bits (1200), Expect = 2.6e-128
Identity = 234/289 (80.97%), Postives = 253/289 (87.54%), Query Frame = 1


Query: 4   SSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLR 63
           SSVG+  S  KA+ L DA+ WW ++NDS LWQD IF  LA LYG+VAIVALVQL+RIQLR
Sbjct: 8   SSVGLVQSAVKAYNLRDASNWWHDVNDSPLWQDRIFHALALLYGLVAIVALVQLIRIQLR 67

Query: 64  VPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALL 123
           VPEYGWTTQKVFHFLNF+VN VRA VF+FRR VQ L P I+ HILLDMPSLAFFTTYALL
Sbjct: 68  VPEYGWTTQKVFHFLNFVVNAVRAAVFIFRRQVQKLHPEIVKHILLDMPSLAFFTTYALL 127

Query: 124 VLFWAEIYYQARAVSTDGLRPTFLTI---------VLWLILWWNPVHVLATLSKMFFASV 183
           VLFWAEIYYQARAVSTDGLRP+F TI          +WLILWW P+ VL  LSKMFFA V
Sbjct: 128 VLFWAEIYYQARAVSTDGLRPSFFTINAVVYVIQIAMWLILWWKPIPVLLILSKMFFAGV 187

Query: 184 SLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFD 243
           SLFAA+GFL+YGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICF+CFLVRCIMMCFNAFD
Sbjct: 188 SLFAAVGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFD 247

Query: 244 QAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 284
           +AADLDVL+HP+LNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR
Sbjct: 248 KAADLDVLNHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 296

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g06630 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TOM3_TOBAC	6.4e-127	79.09	Tobamovirus multiplication protein 3 OS=Nicotiana tabacum GN=TOM3 PE=1 SV=1	[more]
THH1_ARATH	2.4e-126	77.54	Protein TOM THREE HOMOLOG 1 OS=Arabidopsis thaliana GN=THH1 PE=2 SV=1	[more]
TOM3_ARATH	4.6e-125	78.45	Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2	[more]
TOM1_TOBAC	9.6e-91	61.48	Tobamovirus multiplication protein 1 OS=Nicotiana tabacum GN=TOM1 PE=1 SV=1	[more]
TOM1_ARATH	5.3e-89	59.78	Tobamovirus multiplication protein 1 OS=Arabidopsis thaliana GN=TOM1 PE=1 SV=1	[more]

BLAST of Cp4.1LG01g06630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMG2_CUCSA	1.5e-143	89.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G264280 PE=4 SV=1	[more]
Q402E9_CUCME	2.0e-143	89.73	Tobamovirus multiplication 1 homolog OS=Cucumis melo GN=CmTH1 PE=2 SV=1	[more]
M5XYR5_PRUPE	6.9e-128	80.28	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009358mg PE=4 SV=1	[more]
A0A0K9QZ13_SPIOL	1.2e-127	83.45	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_124640 PE=4 SV=1	[more]
A0A0J8CAT0_BETVU	4.5e-127	83.45	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g132160 PE=4 S...	[more]

BLAST of Cp4.1LG01g06630 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14530.1	1.4e-127	77.54	Protein of unknown function (DUF1084)	[more]
AT2G02180.1	2.6e-126	78.45	tobamovirus multiplication protein 3	[more]
AT4G21790.1	3.0e-90	59.78	tobamovirus multiplication 1	[more]

BLAST of Cp4.1LG01g06630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445290\|ref\|XP_004140406.1\|	2.2e-143	89.73	PREDICTED: protein TOM THREE HOMOLOG 1 isoform X1 [Cucumis sativus]	[more]
gi\|661902915\|ref\|NP_001284434.1\|	2.9e-143	89.73	protein TOM THREE HOMOLOG 1 [Cucumis melo]	[more]
gi\|778701775\|ref\|XP_011655086.1\|	8.9e-129	83.56	PREDICTED: protein TOM THREE HOMOLOG 1 isoform X2 [Cucumis sativus]	[more]
gi\|659120519\|ref\|XP_008460232.1\|	1.2e-128	83.56	PREDICTED: protein TOM THREE HOMOLOG 1 isoform X2 [Cucumis melo]	[more]
gi\|645228447\|ref\|XP_008221000.1\|	2.6e-128	80.97	PREDICTED: protein TOM THREE HOMOLOG 1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009457	DUF1084

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009705	plant-type vacuole membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g06630.1	Cp4.1LG01g06630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009457	Domain of unknown function DUF1084	PFAM	PF06454	DUF1084	coord: 21..283 score: 1.8E
None	No IPR available	PANTHER	PTHR31142	FAMILY NOT NAMED	coord: 10..283 score: 2.2E
None	No IPR available	PANTHER	PTHR31142:SF3	PROTEIN TOM THREE HOMOLOG 1-RELATED	coord: 10..283 score: 2.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g06630	CmaCh04G000030	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g06630	CmoCh04G000050	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g06630	Csa5G264280	Cucumber (Chinese Long) v2	cpecuB433
Cp4.1LG01g06630	CsaV3_5G012600	Cucumber (Chinese Long) v3	cpecucB0561
Cp4.1LG01g06630	Bhi07G000078	Wax gourd	cpewgoB0564
Cp4.1LG01g06630	Carg27079	Silver-seed gourd	carcpeB1036

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g06630	Wild cucumber (PI 183967)	cpecpiB432
Cp4.1LG01g06630	Watermelon (Charleston Gray)	cpewcgB361
Cp4.1LG01g06630	Watermelon (97103) v1	cpewmB468
Cp4.1LG01g06630	Cucumber (Gy14) v2	cgybcpeB642
Cp4.1LG01g06630	Cucumber (Chinese Long) v3	cpecucB0532