CmoCh04G000050 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G000050
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Tobamovirus multiplication 1 homolog
Location	Cmo_Chr04 : 17554 .. 22876 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATAAGAGAAATCTCTGTTTGCGCGTAGTTTTCCCATCTCACTTTCGGGATCTCTCTATTTTTGCTGCACATTCTGTATTTCCCCAATTTCGTTTAAATGCCGCAACACACCTAGATTATTTGCCCCAAAACGAAGAACCAAGAATATTCACTCACAACACAGCTACATTATTTGCTCGATTGATCGCATTGCTGTTTTCTTTTTTCGTCGTTGAATTTCGCGGAGGAACGACGATTCTCTATAATTCGTTTCCACGTGAAAGGGGAGGAGGATCAATGGAGACTAGCAGCGTCGGCATGGATAATTCGCCGGCGAAGGCGTTTTTGTTGATCGACGCAACCACTTGGTGGCAAGAAATCAATGATTCTCTCCTTTGGCAGGATCATATCTTCCTCACCCTTGCCGCTCTTTATGGCATCGTCGCCATCGTCGCTCTTGTAGGCTCCTTCTCTCTGTTTCTATACCCTTCTGTTCCCGTCCTTGTCCTTGTGTTTTCTGTTGTTAATCTCTCGTCGGAATTGGGTTTTTGTTTACTAGACTGAATATTTGATTTTCATGGTGTCCCTTGTTTATGGTTTCCTTAATTTCGTTGTTGTATTGGGTTATTTGCTCATTGCACATCTAATTCACCTGGACTTGAATATGGGGTTTTATTTAAGGATTTTGTTGTTTCTGATTCATAATCCCTGTCTCTGTGCTAGGAAAAGAACGAAGAGCTAGCAAACATGGAGCTTTCTTTGTCATTCTACTTTTGATCCTTAATTGTTTCTTTAGAATGAAAAACTGTAGTGGGGACTCTCTGGTTTTAGGCAATGGAAAAAGAATGGATGAGATAATGAATTCGATTGTATGAATCGTTGTTGGATTTCTTAAATGTTTAATGTTAGGATGTTTGTGCGTGGTTTTAGGTTCAACTAGTTCGTATACAATTGAGGGTGCCGGAGTATGGTTGGACCACGCAGAAGGTCTTCCATTTTCTCAATTTCTTGGTGAACGGAGGTTTATTTCATCGGTTTTGTTTTTCCTTTTTCCACTTACCTTTTCTTTAATTGTTGTGAGTTCTGTGAATCTCTGGGCTAAGTGATTAAATGTTTCTCACTGCAGTGCGGGCAGTCATTTTTGTATTCCGTCGTGACGTACAGAGTTTGGAACCACCGGTGTGGTTCGGTTCTTAATTGGTTGTTCTGATTTCTTTTTCCTATCACATGTTTAATGTTTCCCTTGTTTGTCTGTCTTAATAGATTCTCCATCATATCTTGCTTGACATGCCAAGCCTTGCCTTCTTCACAACTTATGCTCTATTGGTTTTGTTTTGGGCAGAGATTTACTACCAGGTGGACATTTTTATTTTTGAATTCATAATGTCCTTTTTGCGAATATGGAAAGACTGTATGTATACACACCTTACAAAAACTTTCCTCAGGCACGTGCTGTATCAACTGATGGGTTGAGACCAACTTTCCTTACAGTAAATGCAGTGGTCTATATTATTCAGGTGAGGCTCATTGCTATATCACGATTGAGAGATGAAGAATAGAATATTAGGGGCGAGGAGAGTTCAGGGGAGGAGGTTTGGTCTTTAGCAAGGTTTGACGCCTCATTTTGGGCGTCCATGTTGAAGGAGTTTTGCAATTATTAAGTTAGGTCTTATTATTCTAAATGGTAGCTCTTTCCTAGGCCGCCAAGCTAGGTATCATCAGCCTCCTTTTAGGTGGTTGTTTTGTAGGCCCGTTTTTTATTGGCTCGTGCTTTCGTCCCTTGTTAGCTCTCTTGTACTCTTTCATCTTTTCTGATTTTTTCATTTTAAAAAAAATGTGTGTATCAGGGTGTTGGCTCGTTGTGGCCATTTCAATTAACGATATCAACAATCATTTGATTCATAACACCAGTTATTAATTTCGTAATCTAGTGAATATGAGTGAGAATAATGCGTACTTAAGCATGTTGGATGGTAAAGCAGACCATTGACTCAACGTGTAACTAACCATACATGTGTCGGCTGTATTTTGCATTCTGCCTACTACGTGGATCATTATTCATAGTCAATAGCCAGAATGTTAACCGATTAATATATTTAACCCTTCTTTTTCTAAAAGTTTGATTGAGTTGCTTGCAGATTGTTTTGTGGCTGATATTGTGGTGGAATCCTGTTCATGTTCTGGCCACCCTTTCTAAGATGTTCTTTGCCAGTGTCTCTTTGTTTGCTGCCCTCGGGTTTCTTATTTATGGGGGAAGGTAATATTAGCATCTGCTTTTTCTCTGTTTCTTTATGATTTACATACATTTAAATAATCCTTTTTTCTGTGATGGAGAAGAAAAAAATCTATGTTTATTGCTTATAGAACCATACACTACAAGGGAAGTTTGTGAACATCATGAACTTCTAAACGGGCCTTGTGTTTCTTTAATTGGGGAGTAATTTTGTTAATGGCTGCTGTATTTTAAAGGTATATGTGCCAGATATGATTTATAGCTTAGGGAAGCTGTATATGTCCGAGTAAAAATCCATTTGCCTATAGATTTAACTATTAAAGGTGGAATATAAAGTTGCAGCTCAGTGGTCCCCAGTGAGTGGTTCTTCCAGTTGAATAATTTCATTTCTTCCGGTGTTGATGGATACCGGTCATTGAGATTGGAGATCCTGAGATGGATTGGTTGAGACGACCCTAATCAATTCTGAAAAGTTAATGAAGACTTCTAGAAGGGGTTTTTCTTTTTTTGGTGTTGTGTGAGAGAGAGAGAGAGAAGAAACTACTTTCATGAAAGAATACACCAACAGAACATAAGCCAAAGGAACAAGGGAGCCACAACAAAGTTAAAACGAAAGGCTCCTGTCATTTCAAATTTAATCCAGGAAACAGAAAACACTGAGAACCAAAAACGTGCACAGAGCGATTGAAGGCGAGCCATTCTTCAATTGTTCTCTGTGTGTGAGTCGTATGACATTTTCCCCCTGAAATTCTCAGTTTAATTGGGGTTGGAGAATCTTTTTTTTTCCTCAAAACAATTTCAAGGACGGGGGGCAGAATGTAACCTTGCTTTGACCCCAATCTCTACCCTGAAGTTTTTTTTAAAAATATTTACAGCACAAGGCTTTTTGTTGGTTATGGACCTTATGGTTAGAAAGTCAACCATAAATAAGTTAGCGTCTTGGCAAGACTTTTTTAAATCAATATTTAAAAATAATAAAGGAGTTAGATTATTATTATTATTATTTTTAGGGAAACGTTGCTGTTATAACTACAAATAGTTGAACTTTAACAATATGCATACTAGCACTGAATTATAAAGGTTGGAATCCCAAGGTATTTCTAAATTGCGAGGGTTGCTGCAATTATTTGCCTTCATACTTATGAAATTTAAATCCAATGACTAATGGAGATATAGCTATAGGGTATGTAATATTTTCAAATTTTTAGGAGTAATTTTTCAGATTCAAAGTTGGGCGTGACAGTACCAATGTTTAGTTTTGGAGTGGTTTCTTTTTTGCCAAAAATAATTGAAGAGTTGAGGAAGGTTCACTTTTCTTGTCATATGATAACCCTTTTCGTGCAGAATTGTTAAATCATGTGATCTTCAGTAGTTTTCACTTCCGTTGGCTTTTCTCTTTTGGTGCACTATTGGCATCTGGCAGACTTGGAAATTCCCTGTCTGTGACATTACTTGTAATTTGCTAATGGTTACTTTAACTGTCTCTGGGTAGATTGTTCTTGATGTTACAGCGCTTTCCTGTGGAATCCAAAGGAAGACGTAAGAAGTTGCAAGAGGTAGGATGTTATAGACTTCTTTTTAGAATTTTGATTCGTTTTAATCTTTCCCATAGATTCTCTCTTTTAACTTCTATTTGTTTTGGGTGGGACAGGTTGGCTATGTGACAACTATATGTTTTTCTTGTTTCCTCGTCAGATGCATCATGGTGAGTTTACTTCTCTCCAATGTTGTTATGCTGTACCAATGGGAGTGATTGCATTAGATATTCTGCCTTGTAGAGTTAGTATGTTATCATGCTTACAATCGGTGTGTAGAACAAACATCTCGCTCATTATGATTGATCAAATTTTAAAAATATTTGTGACAAGTTTAAGAAGTTGGACAATTGTAATTTATAATGGAGGTGCTAACTATTATAATCAGCTTTTGTTACTTGATGTGCATGAAAATTAGCATAGAATAATGTTTTAATAAGATATGAAGACAAGCAACTCAAGAAGGTTAGCTGTATCGACGGTTACCTACATGTTTTACCGTACCAGTAACTGGGCCGGGCCTGGGTATTATAATGAACTTCAAATCCATTTTCGTTTGGGTCCTTAACCAATCATCAAGGAAAGCCTAACGCCGTCCTCAAGGATTGAGCATAACGTAATAAAGTTACATATAGGCTTATTCTTGTAGCTATTACTGGTAGGTAACCGTAATAAAGTTAATTGCTTTATAGTCATACTCATTCGTTTTAATCTTGGTTTAATTTTCTTGCGCTGTAGATGTGCTTTAATGCTTTTGATCAAGCTGCAGACCTTGATGTTTTGGATCATCCTGTTCTAAATTTTATATACTACCTGGTAAATTCGGATTTACCTATGATATTTCGCTTGTGGTTGTTTGTATTACTGGAATCTTTTAGTCAATTGGGGTATTCTAATCAATATGATGAGTTTCCTGCATTCAGTTTGAGTATTAGTGTTCTATGATGATGAATCTAGTTCAAGTCTCAGCGTTAAGCTTGGGACTTGGTGCCTTTTCATAAAGGTGAACTTAAAATTATAATGGAAGATGGGTTATTCTTTGAATGGAATATGTTGTTCCTTAGTATTTTCTACTTCTTTTTGTTCGGGAAAATGTCTTACTTGTGTTTCCATGTCTGCAGTTGGTTGAGATTTTACCTTCTTCTCTGGTCCTCTTCATTCTGAGAAAGCTGCCTCCCAAACAAGGAATTACGCAGTACCATCCTATCCGCTGAAAGGGTTGAGGAAGAAAAAGAAAGTGTTGCATGCAGAAGTAAACGAAGAATTGGGAATGAAAATGTACATGCTTTCTAGGGAAACAGGCATTTGGAGTTGTGTTTAAATAGAAATGAAGAGGTACAGGCCCGAGATTAGTGTTGGTGTGGCATATGATTTAACCTAACTCGCTGGATCTCTTGTTGTTTCCTTTTTGGTTCAATAATAGCAAGAGAAACAGTGACATTTCTAAATGCTTTTCCCTGTATATATACCCAACAATTGCATCTGAATTCTGCTTTTATAACTCATGCTCTATGACTCGTTAATTTTTTGCGACAAAAGCCGTTAGAGGCGGAGGAATTCAAACCCAAGACTTG

mRNA sequence

CCCATAAGAGAAATCTCTGTTTGCGCGTAGTTTTCCCATCTCACTTTCGGGATCTCTCTATTTTTGCTGCACATTCTGTATTTCCCCAATTTCGTTTAAATGCCGCAACACACCTAGATTATTTGCCCCAAAACGAAGAACCAAGAATATTCACTCACAACACAGCTACATTATTTGCTCGATTGATCGCATTGCTGTTTTCTTTTTTCGTCGTTGAATTTCGCGGAGGAACGACGATTCTCTATAATTCGTTTCCACGTGAAAGGGGAGGAGGATCAATGGAGACTAGCAGCGTCGGCATGGATAATTCGCCGGCGAAGGCGTTTTTGTTGATCGACGCAACCACTTGGTGGCAAGAAATCAATGATTCTCTCCTTTGGCAGGATCATATCTTCCTCACCCTTGCCGCTCTTTATGGCATCGTCGCCATCGTCGCTCTTGTTCAACTAGTTCGTATACAATTGAGGGTGCCGGAGTATGGTTGGACCACGCAGAAGGTCTTCCATTTTCTCAATTTCTTGGTGAACGGAGTGCGGGCAGTCATTTTTGTATTCCGTCGTGACGTACAGAGTTTGGAACCACCGATTCTCCATCATATCTTGCTTGACATGCCAAGCCTTGCCTTCTTCACAACTTATGCTCTATTGGTTTTGTTTTGGGCAGAGATTTACTACCAGGCACGTGCTGTATCAACTGATGGGTTGAGACCAACTTTCCTTACAGTAAATGCAGTGGTCTATATTATTCAGATTGTTTTGTGGCTGATATTGTGGTGGAATCCTGTTCATGTTCTGGCCACCCTTTCTAAGATGTTCTTTGCCAGTGTCTCTTTGTTTGCTGCCCTCGGGTTTCTTATTTATGGGGGAAGATTGTTCTTGATGTTACAGCGCTTTCCTGTGGAATCCAAAGGAAGACGTAAGAAGTTGCAAGAGGTTGGCTATGTGACAACTATATGTTTTTCTTGTTTCCTCGTCAGATGCATCATGATGTGCTTTAATGCTTTTGATCAAGCTGCAGACCTTGATGTTTTGGATCATCCTGTTCTAAATTTTATATACTACCTGTTGGTTGAGATTTTACCTTCTTCTCTGGTCCTCTTCATTCTGAGAAAGCTGCCTCCCAAACAAGGAATTACGCAGTACCATCCTATCCGCTGAAAGGGTTGAGGAAGAAAAAGAAAGTGTTGCATGCAGAAGTAAACGAAGAATTGGGAATGAAAATGTACATGCTTTCTAGGGAAACAGGCATTTGGAGTTGTGTTTAAATAGAAATGAAGAGGTACAGGCCCGAGATTAGTGTTGGTGTGGCATATGATTTAACCTAACTCGCTGGATCTCTTGTTGTTTCCTTTTTGGTTCAATAATAGCAAGAGAAACAGTGACATTTCTAAATGCTTTTCCCTGTATATATACCCAACAATTGCATCTGAATTCTGCTTTTATAACTCATGCTCTATGACTCGTTAATTTTTTGCGACAAAAGCCGTTAGAGGCGGAGGAATTCAAACCCAAGACTTG

Coding sequence (CDS)

ATGGAGACTAGCAGCGTCGGCATGGATAATTCGCCGGCGAAGGCGTTTTTGTTGATCGACGCAACCACTTGGTGGCAAGAAATCAATGATTCTCTCCTTTGGCAGGATCATATCTTCCTCACCCTTGCCGCTCTTTATGGCATCGTCGCCATCGTCGCTCTTGTTCAACTAGTTCGTATACAATTGAGGGTGCCGGAGTATGGTTGGACCACGCAGAAGGTCTTCCATTTTCTCAATTTCTTGGTGAACGGAGTGCGGGCAGTCATTTTTGTATTCCGTCGTGACGTACAGAGTTTGGAACCACCGATTCTCCATCATATCTTGCTTGACATGCCAAGCCTTGCCTTCTTCACAACTTATGCTCTATTGGTTTTGTTTTGGGCAGAGATTTACTACCAGGCACGTGCTGTATCAACTGATGGGTTGAGACCAACTTTCCTTACAGTAAATGCAGTGGTCTATATTATTCAGATTGTTTTGTGGCTGATATTGTGGTGGAATCCTGTTCATGTTCTGGCCACCCTTTCTAAGATGTTCTTTGCCAGTGTCTCTTTGTTTGCTGCCCTCGGGTTTCTTATTTATGGGGGAAGATTGTTCTTGATGTTACAGCGCTTTCCTGTGGAATCCAAAGGAAGACGTAAGAAGTTGCAAGAGGTTGGCTATGTGACAACTATATGTTTTTCTTGTTTCCTCGTCAGATGCATCATGATGTGCTTTAATGCTTTTGATCAAGCTGCAGACCTTGATGTTTTGGATCATCCTGTTCTAAATTTTATATACTACCTGTTGGTTGAGATTTTACCTTCTTCTCTGGTCCTCTTCATTCTGAGAAAGCTGCCTCCCAAACAAGGAATTACGCAGTACCATCCTATCCGCTGA

Homology

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BLAST of CmoCh04G000050 vs. Swiss-Prot
Match: TOM3_TOBAC (Tobamovirus multiplication protein 3 OS=Nicotiana tabacum GN=TOM3 PE=1 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 4.0e-132
Identity = 231/287 (80.49%), Postives = 256/287 (89.20%), Query Frame = 1


Query: 6   VGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVP 65
           VG   + A   L  +A +WW+E+N S  WQD +F  LA LYGIV+ VALVQL+RIQ+RVP
Sbjct: 8   VGPSAAAAAYHLKNEAISWWEEVNRSRAWQDRLFHVLAILYGIVSAVALVQLIRIQMRVP 67

Query: 66  EYGWTTQKVFHFLNFLVNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVL 125
           EYGWTTQKVFHFLNFLVNGVR+++F FRRDVQ L P I+ HILLDMPSLAFFTTYALLVL
Sbjct: 68  EYGWTTQKVFHFLNFLVNGVRSLVFAFRRDVQKLHPEIVQHILLDMPSLAFFTTYALLVL 127

Query: 126 FWAEIYYQARAVSTDGLRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFFASVSL 185
           FWAEIYYQARAVSTDGLRP+F T+N VVY+IQI+LWLI+WW PV VL  LSKMFFA VSL
Sbjct: 128 FWAEIYYQARAVSTDGLRPSFFTINGVVYVIQIILWLIIWWKPVRVLVILSKMFFAGVSL 187

Query: 186 FAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQA 245
           FAALGFL+YGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFL+RC+MMCFNAF++A
Sbjct: 188 FAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFNKA 247

Query: 246 ADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           ADLDVLDHP+LN IYYLLVEILPSSLVLFILRKLPPK+GITQYHPIR
Sbjct: 248 ADLDVLDHPILNLIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 294

[Close]

BLAST of CmoCh04G000050 vs. Swiss-Prot
Match: THH1_ARATH (Protein TOM THREE HOMOLOG 1 OS=Arabidopsis thaliana GN=THH1 PE=2 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 6.8e-132
Identity = 226/285 (79.30%), Postives = 259/285 (90.88%), Query Frame = 1


Query: 8   MDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEY 67
           M +S   AF L +   WW ++N+S +WQD IF  LA LYGIV+++A++QLVRIQLRVPEY
Sbjct: 9   MSSSAIVAFNLKEGKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEY 68

Query: 68  GWTTQKVFHFLNFLVNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFW 127
           GWTTQKVFHFLNF+VNGVRA++F+FRRD Q+++P IL HILLD+PSLAFFTTYALLVLFW
Sbjct: 69  GWTTQKVFHFLNFMVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFW 128

Query: 128 AEIYYQARAVSTDGLRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFFASVSLFA 187
           AEIYYQARAVSTDGLRP+F T+NAVVY+IQI LWL+LWW PVH++  +SKMFFA VSLFA
Sbjct: 129 AEIYYQARAVSTDGLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFA 188

Query: 188 ALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAAD 247
           ALGFL+YGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RCIMMCF+AFD AAD
Sbjct: 189 ALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAAD 248

Query: 248 LDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           LDVLDHP+LNFIYYLLVEILPSSLVLFILRKLPPK+GITQYH I+
Sbjct: 249 LDVLDHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293

[Close]

BLAST of CmoCh04G000050 vs. Swiss-Prot
Match: TOM3_ARATH (Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2)

HSP 1 Score: 466.8 bits (1200), Expect = 1.7e-130
Identity = 226/283 (79.86%), Postives = 257/283 (90.81%), Query Frame = 1


Query: 10  NSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEYGW 69
           +S  +   L +A+ WW ++N+S +WQD IF  LA LYGIV++VA++QLVRIQLRVPEYGW
Sbjct: 21  SSAVEMLNLKEASNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGW 80

Query: 70  TTQKVFHFLNFLVNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFWAE 129
           TTQKVFHFLNF+VNGVRAV+FVFRR+VQ ++P IL HILLD+PSLAFFTTYALLVLFWAE
Sbjct: 81  TTQKVFHFLNFVVNGVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAE 140

Query: 130 IYYQARAVSTDGLRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFFASVSLFAAL 189
           IYYQARAVSTDGLRP+F T+NAVVY++QI LWL+LWW PV V+  LSKMFFA VSLFAAL
Sbjct: 141 IYYQARAVSTDGLRPSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAAL 200

Query: 190 GFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAADLD 249
           GFL+YGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RCIMMCF AFD+ A+LD
Sbjct: 201 GFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLD 260

Query: 250 VLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           VLDHP+LNFIYYLLVEILPSSLVLFILRKLPPK+GITQYH IR
Sbjct: 261 VLDHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHQIR 303

[Close]

BLAST of CmoCh04G000050 vs. Swiss-Prot
Match: TOM1_TOBAC (Tobamovirus multiplication protein 1 OS=Nicotiana tabacum GN=TOM1 PE=1 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.9e-94
Identity = 167/270 (61.85%), Postives = 211/270 (78.15%), Query Frame = 1


Query: 22  TTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEYGWTTQKVFHFLNFL 81
           T WW +IN+S+ WQD IF +L A Y +V+ VAL+QL+RI+LRVPEYGWTTQKVFH +NF+
Sbjct: 18  TNWWDQINESVQWQDGIFYSLCASYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNFV 77

Query: 82  VNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDG 141
           VNGVRA++F F + V    P +L   +LD+P L FF+T+ LLVLFWAEIY+QAR++ TD 
Sbjct: 78  VNGVRAIVFGFHKQVFLFHPKVLSLAILDLPGLLFFSTFTLLVLFWAEIYHQARSLPTDK 137

Query: 142 LRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFFASVSLFAALGFLIYGGRLFLM 201
           LR +++++N  +Y IQ  +W+ LW N    +  + K+F A VS  AALGFL+YGGRLFLM
Sbjct: 138 LRISYISINGAIYFIQACIWVYLWSNDNSTVEFIGKIFIAVVSFIAALGFLLYGGRLFLM 197

Query: 202 LQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAADLDVLDHPVLNFIYY 261
           L+RFP+ESKGRRKKL EVG VT ICF+CFL+ C ++  +AFD  A LDVLDHPVLN IYY
Sbjct: 198 LRRFPIESKGRRKKLHEVGSVTAICFTCFLISCFVVVLSAFDPDASLDVLDHPVLNLIYY 257

Query: 262 LLVEILPSSLVLFILRKLPPKQGITQYHPI 292
           LLVEILPS+LVL+ILRKLPPK+   QYHPI
Sbjct: 258 LLVEILPSALVLYILRKLPPKRVSAQYHPI 287

[Close]

BLAST of CmoCh04G000050 vs. Swiss-Prot
Match: TOM1_ARATH (Tobamovirus multiplication protein 1 OS=Arabidopsis thaliana GN=TOM1 PE=1 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 2.1e-93
Identity = 166/271 (61.25%), Postives = 210/271 (77.49%), Query Frame = 1


Query: 22  TTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEYGWTTQKVFHFLNFL 81
           T+WW ++N+S  WQD IF  L   Y +V+ VALVQL+RIQ+RVPEYGWTTQKVFH +NF+
Sbjct: 21  TSWWDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWTTQKVFHLMNFV 80

Query: 82  VNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDG 141
           VNGVRAV+F F   V  + P  L  +LLD+P L FF+ Y LLVLFWAEIY+QAR++ TD 
Sbjct: 81  VNGVRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEIYHQARSLPTDK 140

Query: 142 LRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFFASVSLFAALGFLIYGGRLFLM 201
           LR T+++VN  VY+ QI +W  +W +    +  + K+F A VS  AALGFL+YGGRLF M
Sbjct: 141 LRITYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALGFLLYGGRLFFM 200

Query: 202 LQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAADLDVLDHPVLNFIYY 261
           L+RFP+ESKGRRKKL EVG VT ICF+CFL+RC+++  +AFD+   LDVLDHPVLN IYY
Sbjct: 201 LRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDVLDHPVLNLIYY 260

Query: 262 LLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           ++VE+LPS+LVLFILRKLPPK+   QYHPI+
Sbjct: 261 MVVEVLPSALVLFILRKLPPKRVSAQYHPIQ 291

[Close]

BLAST of CmoCh04G000050 vs. TrEMBL
Match: A0A0A0KMG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G264280 PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 3.3e-149
Identity = 268/292 (91.78%), Postives = 280/292 (95.89%), Query Frame = 1


Query: 1   METSSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRI 60
           METSS+G+DNS   AFLL DAT+WWQEIN S LWQD IF TLAALYG+V IVALVQL+RI
Sbjct: 1   METSSLGIDNSGVPAFLLTDATSWWQEINYSHLWQDRIFFTLAALYGLVGIVALVQLIRI 60

Query: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTY 120
           QLRVPEYGWTTQKVFHFLNFLVNGVRAV+FVFRRDVQ+LEPPIL HILLDMPSLAFFTTY
Sbjct: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQNLEPPILQHILLDMPSLAFFTTY 120

Query: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFF 180
           ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVY+IQIVLWL+LWWNPVHVLA LSKMFF
Sbjct: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYVIQIVLWLVLWWNPVHVLAILSKMFF 180

Query: 181 ASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240
           A VSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN
Sbjct: 181 ACVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240

Query: 241 AFDQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           AFDQAADLDVLDHPVLNFIYYLLVEI+PSS+VLFILRKLPPK+GITQYHPIR
Sbjct: 241 AFDQAADLDVLDHPVLNFIYYLLVEIVPSSMVLFILRKLPPKRGITQYHPIR 292

[Close]

BLAST of CmoCh04G000050 vs. TrEMBL
Match: Q402E9_CUCME (Tobamovirus multiplication 1 homolog OS=Cucumis melo GN=CmTH1 PE=2 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 4.3e-149
Identity = 268/292 (91.78%), Postives = 279/292 (95.55%), Query Frame = 1


Query: 1   METSSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRI 60
           METSS+G+DNS   AFLL D T+WWQEIN S LWQD IF TLAALYG+V IVALVQLVRI
Sbjct: 1   METSSLGIDNSGVPAFLLTDGTSWWQEINYSRLWQDRIFFTLAALYGVVGIVALVQLVRI 60

Query: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTY 120
           QLRVPEYGWTTQKVFHFLNFLVNGVRAV+FVFRRDVQ+LEPPIL HILLDMPSLAFFTTY
Sbjct: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQNLEPPILQHILLDMPSLAFFTTY 120

Query: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFF 180
           ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVY+IQIVLWL+LWWNPVHVLA LSKMFF
Sbjct: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYVIQIVLWLVLWWNPVHVLAILSKMFF 180

Query: 181 ASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240
           A VSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN
Sbjct: 181 ACVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240

Query: 241 AFDQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           AFDQAADLDVLDHPVLNFIYYLLVEI+PSS+VLFILRKLPPK+GITQYHPIR
Sbjct: 241 AFDQAADLDVLDHPVLNFIYYLLVEIVPSSMVLFILRKLPPKRGITQYHPIR 292

[Close]

BLAST of CmoCh04G000050 vs. TrEMBL
Match: M5XYR5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009358mg PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 1.5e-133
Identity = 237/289 (82.01%), Postives = 262/289 (90.66%), Query Frame = 1


Query: 4   SSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLR 63
           SSVG+  S  KA+ L DA+ WW ++NDS +WQD IF  LA LYG+VAIVALVQL+RIQLR
Sbjct: 8   SSVGLVQSAVKAYNLRDASNWWHDVNDSPIWQDRIFHALALLYGLVAIVALVQLIRIQLR 67

Query: 64  VPEYGWTTQKVFHFLNFLVNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALL 123
           VPEYGWTTQKVFHFLNF+VN VRA +F+FRR VQ L P I+ HILLDMPSLAFFTTYALL
Sbjct: 68  VPEYGWTTQKVFHFLNFVVNAVRAAVFIFRRQVQKLHPEIVKHILLDMPSLAFFTTYALL 127

Query: 124 VLFWAEIYYQARAVSTDGLRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFFASV 183
           VLFWAEIYYQARAVSTDGLRP+F T+NAVVY+IQI +WLILWW P+ VL  L+KMFFA V
Sbjct: 128 VLFWAEIYYQARAVSTDGLRPSFFTINAVVYVIQIAMWLILWWKPIPVLLILAKMFFAGV 187

Query: 184 SLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFD 243
           SLFAA+GFL+YGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICF+CFLVRCIMMCFNAFD
Sbjct: 188 SLFAAVGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFACFLVRCIMMCFNAFD 247

Query: 244 QAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           +AADLDVL+HP+LNFIYYLLVEILPSSLVLFILRKLPPK+GITQYHPIR
Sbjct: 248 KAADLDVLNHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 296

[Close]

BLAST of CmoCh04G000050 vs. TrEMBL
Match: A0A0K9QZ13_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_124640 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 1.9e-133
Identity = 238/278 (85.61%), Postives = 258/278 (92.81%), Query Frame = 1


Query: 15  AFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEYGWTTQKV 74
           AFLL DA+ WW  INDSLLWQD IF  L+ LYGIV++VALVQLVRIQLRVPEYGWTTQKV
Sbjct: 13  AFLLKDASNWWNNINDSLLWQDRIFHVLSILYGIVSVVALVQLVRIQLRVPEYGWTTQKV 72

Query: 75  FHFLNFLVNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFWAEIYYQA 134
           FHFLNFLVNGVR V+FVFRRDVQ L+P I+ H+LLD+PSLAFFTTYALLVLFWAEIYYQA
Sbjct: 73  FHFLNFLVNGVRCVVFVFRRDVQLLQPEIVQHVLLDLPSLAFFTTYALLVLFWAEIYYQA 132

Query: 135 RAVSTDGLRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFFASVSLFAALGFLIY 194
           RAVSTDGLRP+F T+NAVVYIIQI LWLILWW P+ VL  LSKMFFA VSLFAALGFL+Y
Sbjct: 133 RAVSTDGLRPSFFTINAVVYIIQIALWLILWWKPIPVLVILSKMFFAGVSLFAALGFLLY 192

Query: 195 GGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAADLDVLDHP 254
           GGRLFLMLQRFPVESKGRRKKLQEVGYVTTICF+CFLVRC+MMCFNAFD+AADLDVLDHP
Sbjct: 193 GGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCVMMCFNAFDKAADLDVLDHP 252

Query: 255 VLNFIYYLLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           VLNF+YYLLVEI+PS+LVLFILRKLPPK+GITQYH IR
Sbjct: 253 VLNFMYYLLVEIVPSTLVLFILRKLPPKRGITQYHQIR 290

[Close]

BLAST of CmoCh04G000050 vs. TrEMBL
Match: A0A0S3R0Q4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G183200 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 6.2e-132
Identity = 235/275 (85.45%), Postives = 255/275 (92.73%), Query Frame = 1


Query: 18  LIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEYGWTTQKVFHF 77
           L +++ WW++IN+S LWQD IF  LA LYGIVA VALVQLVRIQLRVPEYGWTTQKVFHF
Sbjct: 19  LTESSNWWRDINESPLWQDRIFHLLAILYGIVAAVALVQLVRIQLRVPEYGWTTQKVFHF 78

Query: 78  LNFLVNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFWAEIYYQARAV 137
           LNFLVNGVR  +FVFRRDVQ L+P I+ HILLD+PSLAFFTTYALLVLFWAEIYYQARAV
Sbjct: 79  LNFLVNGVRCFVFVFRRDVQKLQPEIVQHILLDVPSLAFFTTYALLVLFWAEIYYQARAV 138

Query: 138 STDGLRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFFASVSLFAALGFLIYGGR 197
           STDGLRP+F T+NAVVY+IQI LWLILWW P+ VL  LSKMFFA VSLFAALGFL+YGGR
Sbjct: 139 STDGLRPSFYTINAVVYVIQIALWLILWWKPISVLVILSKMFFAGVSLFAALGFLLYGGR 198

Query: 198 LFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAADLDVLDHPVLN 257
           LFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFL+RC+MMCFNAFD+AADLDVLDHP+LN
Sbjct: 199 LFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFDRAADLDVLDHPILN 258

Query: 258 FIYYLLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           FIYYLLVEILPSSLVLFILRKLPPK+GITQYHPIR
Sbjct: 259 FIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 293

[Close]

BLAST of CmoCh04G000050 vs. TAIR10
Match: AT1G14530.1 (AT1G14530.1 Protein of unknown function (DUF1084))

HSP 1 Score: 471.5 bits (1212), Expect = 3.8e-133
Identity = 226/285 (79.30%), Postives = 259/285 (90.88%), Query Frame = 1


Query: 8   MDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEY 67
           M +S   AF L +   WW ++N+S +WQD IF  LA LYGIV+++A++QLVRIQLRVPEY
Sbjct: 9   MSSSAIVAFNLKEGKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEY 68

Query: 68  GWTTQKVFHFLNFLVNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFW 127
           GWTTQKVFHFLNF+VNGVRA++F+FRRD Q+++P IL HILLD+PSLAFFTTYALLVLFW
Sbjct: 69  GWTTQKVFHFLNFMVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFW 128

Query: 128 AEIYYQARAVSTDGLRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFFASVSLFA 187
           AEIYYQARAVSTDGLRP+F T+NAVVY+IQI LWL+LWW PVH++  +SKMFFA VSLFA
Sbjct: 129 AEIYYQARAVSTDGLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFA 188

Query: 188 ALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAAD 247
           ALGFL+YGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RCIMMCF+AFD AAD
Sbjct: 189 ALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAAD 248

Query: 248 LDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           LDVLDHP+LNFIYYLLVEILPSSLVLFILRKLPPK+GITQYH I+
Sbjct: 249 LDVLDHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293

[Close]

BLAST of CmoCh04G000050 vs. TAIR10
Match: AT2G02180.1 (AT2G02180.1 tobamovirus multiplication protein 3)

HSP 1 Score: 466.8 bits (1200), Expect = 9.5e-132
Identity = 226/283 (79.86%), Postives = 257/283 (90.81%), Query Frame = 1


Query: 10  NSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEYGW 69
           +S  +   L +A+ WW ++N+S +WQD IF  LA LYGIV++VA++QLVRIQLRVPEYGW
Sbjct: 21  SSAVEMLNLKEASNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGW 80

Query: 70  TTQKVFHFLNFLVNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFWAE 129
           TTQKVFHFLNF+VNGVRAV+FVFRR+VQ ++P IL HILLD+PSLAFFTTYALLVLFWAE
Sbjct: 81  TTQKVFHFLNFVVNGVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAE 140

Query: 130 IYYQARAVSTDGLRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFFASVSLFAAL 189
           IYYQARAVSTDGLRP+F T+NAVVY++QI LWL+LWW PV V+  LSKMFFA VSLFAAL
Sbjct: 141 IYYQARAVSTDGLRPSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAAL 200

Query: 190 GFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAADLD 249
           GFL+YGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RCIMMCF AFD+ A+LD
Sbjct: 201 GFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLD 260

Query: 250 VLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           VLDHP+LNFIYYLLVEILPSSLVLFILRKLPPK+GITQYH IR
Sbjct: 261 VLDHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHQIR 303

[Close]

BLAST of CmoCh04G000050 vs. TAIR10
Match: AT4G21790.1 (AT4G21790.1 tobamovirus multiplication 1)

HSP 1 Score: 343.6 bits (880), Expect = 1.2e-94
Identity = 166/271 (61.25%), Postives = 210/271 (77.49%), Query Frame = 1


Query: 22  TTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLRVPEYGWTTQKVFHFLNFL 81
           T+WW ++N+S  WQD IF  L   Y +V+ VALVQL+RIQ+RVPEYGWTTQKVFH +NF+
Sbjct: 21  TSWWDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWTTQKVFHLMNFV 80

Query: 82  VNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDG 141
           VNGVRAV+F F   V  + P  L  +LLD+P L FF+ Y LLVLFWAEIY+QAR++ TD 
Sbjct: 81  VNGVRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEIYHQARSLPTDK 140

Query: 142 LRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFFASVSLFAALGFLIYGGRLFLM 201
           LR T+++VN  VY+ QI +W  +W +    +  + K+F A VS  AALGFL+YGGRLF M
Sbjct: 141 LRITYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALGFLLYGGRLFFM 200

Query: 202 LQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAADLDVLDHPVLNFIYY 261
           L+RFP+ESKGRRKKL EVG VT ICF+CFL+RC+++  +AFD+   LDVLDHPVLN IYY
Sbjct: 201 LRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDVLDHPVLNLIYY 260

Query: 262 LLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           ++VE+LPS+LVLFILRKLPPK+   QYHPI+
Sbjct: 261 MVVEVLPSALVLFILRKLPPKRVSAQYHPIQ 291

[Close]

BLAST of CmoCh04G000050 vs. NCBI nr
Match: gi|449445290|ref|XP_004140406.1| (PREDICTED: protein TOM THREE HOMOLOG 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 535.8 bits (1379), Expect = 4.7e-149
Identity = 268/292 (91.78%), Postives = 280/292 (95.89%), Query Frame = 1


Query: 1   METSSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRI 60
           METSS+G+DNS   AFLL DAT+WWQEIN S LWQD IF TLAALYG+V IVALVQL+RI
Sbjct: 1   METSSLGIDNSGVPAFLLTDATSWWQEINYSHLWQDRIFFTLAALYGLVGIVALVQLIRI 60

Query: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTY 120
           QLRVPEYGWTTQKVFHFLNFLVNGVRAV+FVFRRDVQ+LEPPIL HILLDMPSLAFFTTY
Sbjct: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQNLEPPILQHILLDMPSLAFFTTY 120

Query: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFF 180
           ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVY+IQIVLWL+LWWNPVHVLA LSKMFF
Sbjct: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYVIQIVLWLVLWWNPVHVLAILSKMFF 180

Query: 181 ASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240
           A VSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN
Sbjct: 181 ACVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240

Query: 241 AFDQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           AFDQAADLDVLDHPVLNFIYYLLVEI+PSS+VLFILRKLPPK+GITQYHPIR
Sbjct: 241 AFDQAADLDVLDHPVLNFIYYLLVEIVPSSMVLFILRKLPPKRGITQYHPIR 292

[Close]

BLAST of CmoCh04G000050 vs. NCBI nr
Match: gi|661902915|ref|NP_001284434.1| (protein TOM THREE HOMOLOG 1 [Cucumis melo])

HSP 1 Score: 535.4 bits (1378), Expect = 6.1e-149
Identity = 268/292 (91.78%), Postives = 279/292 (95.55%), Query Frame = 1


Query: 1   METSSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRI 60
           METSS+G+DNS   AFLL D T+WWQEIN S LWQD IF TLAALYG+V IVALVQLVRI
Sbjct: 1   METSSLGIDNSGVPAFLLTDGTSWWQEINYSRLWQDRIFFTLAALYGVVGIVALVQLVRI 60

Query: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTY 120
           QLRVPEYGWTTQKVFHFLNFLVNGVRAV+FVFRRDVQ+LEPPIL HILLDMPSLAFFTTY
Sbjct: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQNLEPPILQHILLDMPSLAFFTTY 120

Query: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFF 180
           ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVY+IQIVLWL+LWWNPVHVLA LSKMFF
Sbjct: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYVIQIVLWLVLWWNPVHVLAILSKMFF 180

Query: 181 ASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240
           A VSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN
Sbjct: 181 ACVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240

Query: 241 AFDQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           AFDQAADLDVLDHPVLNFIYYLLVEI+PSS+VLFILRKLPPK+GITQYHPIR
Sbjct: 241 AFDQAADLDVLDHPVLNFIYYLLVEIVPSSMVLFILRKLPPKRGITQYHPIR 292

[Close]

BLAST of CmoCh04G000050 vs. NCBI nr
Match: gi|778701775|ref|XP_011655086.1| (PREDICTED: protein TOM THREE HOMOLOG 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 487.3 bits (1253), Expect = 1.9e-134
Identity = 250/292 (85.62%), Postives = 262/292 (89.73%), Query Frame = 1


Query: 1   METSSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRI 60
           METSS+G+DNS   AFLL DAT+WWQEIN S LWQD IF TLAALYG+V IVALVQL+RI
Sbjct: 1   METSSLGIDNSGVPAFLLTDATSWWQEINYSHLWQDRIFFTLAALYGLVGIVALVQLIRI 60

Query: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTY 120
           QLRVPEYGWTTQKVFHFLNFLVNGVRAV+FVFRRDVQ+LEPPIL HILLDMPSLAFFTTY
Sbjct: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQNLEPPILQHILLDMPSLAFFTTY 120

Query: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFF 180
           ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVY+IQIVLWL+LWWNPVHVLA LSKMFF
Sbjct: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYVIQIVLWLVLWWNPVHVLAILSKMFF 180

Query: 181 ASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240
           A VSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE                  MCFN
Sbjct: 181 ACVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFN 240

Query: 241 AFDQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           AFDQAADLDVLDHPVLNFIYYLLVEI+PSS+VLFILRKLPPK+GITQYHPIR
Sbjct: 241 AFDQAADLDVLDHPVLNFIYYLLVEIVPSSMVLFILRKLPPKRGITQYHPIR 274

[Close]

BLAST of CmoCh04G000050 vs. NCBI nr
Match: gi|659120519|ref|XP_008460232.1| (PREDICTED: protein TOM THREE HOMOLOG 1 isoform X2 [Cucumis melo])

HSP 1 Score: 486.9 bits (1252), Expect = 2.5e-134
Identity = 250/292 (85.62%), Postives = 261/292 (89.38%), Query Frame = 1


Query: 1   METSSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRI 60
           METSS+G+DNS   AFLL D T+WWQEIN S LWQD IF TLAALYG+V IVALVQLVRI
Sbjct: 1   METSSLGIDNSGVPAFLLTDGTSWWQEINYSRLWQDRIFFTLAALYGVVGIVALVQLVRI 60

Query: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTY 120
           QLRVPEYGWTTQKVFHFLNFLVNGVRAV+FVFRRDVQ+LEPPIL HILLDMPSLAFFTTY
Sbjct: 61  QLRVPEYGWTTQKVFHFLNFLVNGVRAVVFVFRRDVQNLEPPILQHILLDMPSLAFFTTY 120

Query: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFF 180
           ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVY+IQIVLWL+LWWNPVHVLA LSKMFF
Sbjct: 121 ALLVLFWAEIYYQARAVSTDGLRPTFLTVNAVVYVIQIVLWLVLWWNPVHVLAILSKMFF 180

Query: 181 ASVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFN 240
           A VSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE                  MCFN
Sbjct: 181 ACVSLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQE------------------MCFN 240

Query: 241 AFDQAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           AFDQAADLDVLDHPVLNFIYYLLVEI+PSS+VLFILRKLPPK+GITQYHPIR
Sbjct: 241 AFDQAADLDVLDHPVLNFIYYLLVEIVPSSMVLFILRKLPPKRGITQYHPIR 274

[Close]

BLAST of CmoCh04G000050 vs. NCBI nr
Match: gi|645228447|ref|XP_008221000.1| (PREDICTED: protein TOM THREE HOMOLOG 1 [Prunus mume])

HSP 1 Score: 485.7 bits (1249), Expect = 5.6e-134
Identity = 239/289 (82.70%), Postives = 262/289 (90.66%), Query Frame = 1


Query: 4   SSVGMDNSPAKAFLLIDATTWWQEINDSLLWQDHIFLTLAALYGIVAIVALVQLVRIQLR 63
           SSVG+  S  KA+ L DA+ WW ++NDS LWQD IF  LA LYG+VAIVALVQL+RIQLR
Sbjct: 8   SSVGLVQSAVKAYNLRDASNWWHDVNDSPLWQDRIFHALALLYGLVAIVALVQLIRIQLR 67

Query: 64  VPEYGWTTQKVFHFLNFLVNGVRAVIFVFRRDVQSLEPPILHHILLDMPSLAFFTTYALL 123
           VPEYGWTTQKVFHFLNF+VN VRA +F+FRR VQ L P I+ HILLDMPSLAFFTTYALL
Sbjct: 68  VPEYGWTTQKVFHFLNFVVNAVRAAVFIFRRQVQKLHPEIVKHILLDMPSLAFFTTYALL 127

Query: 124 VLFWAEIYYQARAVSTDGLRPTFLTVNAVVYIIQIVLWLILWWNPVHVLATLSKMFFASV 183
           VLFWAEIYYQARAVSTDGLRP+F T+NAVVY+IQI +WLILWW P+ VL  LSKMFFA V
Sbjct: 128 VLFWAEIYYQARAVSTDGLRPSFFTINAVVYVIQIAMWLILWWKPIPVLLILSKMFFAGV 187

Query: 184 SLFAALGFLIYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFD 243
           SLFAA+GFL+YGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICF+CFLVRCIMMCFNAFD
Sbjct: 188 SLFAAVGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFD 247

Query: 244 QAADLDVLDHPVLNFIYYLLVEILPSSLVLFILRKLPPKQGITQYHPIR 293
           +AADLDVL+HP+LNFIYYLLVEILPSSLVLFILRKLPPK+GITQYHPIR
Sbjct: 248 KAADLDVLNHPILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 296

The following BLAST results are available for this feature:

BLAST of CmoCh04G000050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TOM3_TOBAC	4.0e-132	80.49	Tobamovirus multiplication protein 3 OS=Nicotiana tabacum GN=TOM3 PE=1 SV=1	[more]
THH1_ARATH	6.8e-132	79.30	Protein TOM THREE HOMOLOG 1 OS=Arabidopsis thaliana GN=THH1 PE=2 SV=1	[more]
TOM3_ARATH	1.7e-130	79.86	Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana GN=TOM3 PE=1 SV=2	[more]
TOM1_TOBAC	1.9e-94	61.85	Tobamovirus multiplication protein 1 OS=Nicotiana tabacum GN=TOM1 PE=1 SV=1	[more]
TOM1_ARATH	2.1e-93	61.25	Tobamovirus multiplication protein 1 OS=Arabidopsis thaliana GN=TOM1 PE=1 SV=1	[more]

BLAST of CmoCh04G000050 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMG2_CUCSA	3.3e-149	91.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G264280 PE=4 SV=1	[more]
Q402E9_CUCME	4.3e-149	91.78	Tobamovirus multiplication 1 homolog OS=Cucumis melo GN=CmTH1 PE=2 SV=1	[more]
M5XYR5_PRUPE	1.5e-133	82.01	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009358mg PE=4 SV=1	[more]
A0A0K9QZ13_SPIOL	1.9e-133	85.61	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_124640 PE=4 SV=1	[more]
A0A0S3R0Q4_PHAAN	6.2e-132	85.45	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G183200 PE=...	[more]

BLAST of CmoCh04G000050 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14530.1	3.8e-133	79.30	Protein of unknown function (DUF1084)	[more]
AT2G02180.1	9.5e-132	79.86	tobamovirus multiplication protein 3	[more]
AT4G21790.1	1.2e-94	61.25	tobamovirus multiplication 1	[more]

BLAST of CmoCh04G000050 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445290\|ref\|XP_004140406.1\|	4.7e-149	91.78	PREDICTED: protein TOM THREE HOMOLOG 1 isoform X1 [Cucumis sativus]	[more]
gi\|661902915\|ref\|NP_001284434.1\|	6.1e-149	91.78	protein TOM THREE HOMOLOG 1 [Cucumis melo]	[more]
gi\|778701775\|ref\|XP_011655086.1\|	1.9e-134	85.62	PREDICTED: protein TOM THREE HOMOLOG 1 isoform X2 [Cucumis sativus]	[more]
gi\|659120519\|ref\|XP_008460232.1\|	2.5e-134	85.62	PREDICTED: protein TOM THREE HOMOLOG 1 isoform X2 [Cucumis melo]	[more]
gi\|645228447\|ref\|XP_008221000.1\|	5.6e-134	82.70	PREDICTED: protein TOM THREE HOMOLOG 1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009457	DUF1084

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G000050.1	CmoCh04G000050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009457	Domain of unknown function DUF1084	PFAM	PF06454	DUF1084	coord: 21..292 score: 2.0E
None	No IPR available	PANTHER	PTHR31142	FAMILY NOT NAMED	coord: 10..292 score: 1.6E
None	No IPR available	PANTHER	PTHR31142:SF3	PROTEIN TOM THREE HOMOLOG 1-RELATED	coord: 10..292 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G000050	CmaCh04G000030	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G000050	Csa5G264280	Cucumber (Chinese Long) v2	cmocuB734
CmoCh04G000050	Cp4.1LG01g06630	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G000050	CsaV3_5G012600	Cucumber (Chinese Long) v3	cmocucB0893
CmoCh04G000050	Bhi07G000078	Wax gourd	cmowgoB0898

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G000050	Watermelon (Charleston Gray)	cmowcgB627
CmoCh04G000050	Watermelon (97103) v1	cmowmB736
CmoCh04G000050	Cucumber (Gy14) v2	cgybcmoB641
CmoCh04G000050	Cucumber (Chinese Long) v3	cmocucB0862
CmoCh04G000050	Watermelon (97103) v2	cmowmbB703