Cp4.1LG01g06530 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g06530
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRibosomal RNA-processing 7 A
LocationCp4.1LG01 : 107343 .. 112556 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGAACAGAATAGATATTAAACACGGTTTATACATATATTAAAAATAAAAATAAAAATCAGAAAAATTGAAAGAATTTGTAGGATAAAAGAATTAATAATCTTTTTAACACACGGATTTCAACAATAGTCAAGCTATATGCATAAAATTAGCTAAATGCCTTTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGAATTAAATTTAAACATATTATTTTTAATAATACAAAATAGAAAAATGCTTCAAAAAGGAATTTGGCAACCCTAAACCCTTTCCATCATTCTCTCTCTCACGTGCTCCACCTTCTCCTCCTTCCTCTCGCCGGCTGCTCCTCCCTTTTAGTAGCTCTGTTCTGTCTTCCGACAGTGCCGCCGCAGCCTCCCTCCTAGCGGATTTTCTCTGATTTTCTACTCTCTTCTTGTTGCTGCTATTCTCCCAGTCTTCATGTGCGTCTTTTTTCTCGATTGAACTATTCGGATTAAGACGTATGCTGCATTTTTATTTCTGACATATGTCTGTCAATTGGGCTTTCATCATCTCTATATCTTTTGCTAATAATTAACTTATTCTTTGCTTGTGTTTCGTGAGCACAGAGTGAGATGGATAGACGGACGAAGAAGCGCGACAAAAGGCTTCGCGAGAGTAACACCGAACCTGCCGTTGCAAAGGGTTTGTTTTTTTCTTGCTACCTTGTATACTATATGCTTACTTTCTCATTACTTCTTCAGTTATCTTCGAACGGACTAGAACAAACGTTGAAGAATATCTGCTTCTGGACTCCATTAATATCTTGAACTCCTAATTGTGTCTTCCTTCCTTCGGCACAGCATGTTTTTGTTTATTGGTTTTTAGTCCTTACCCCTATGGGTGATGGGGTTACCTATTTAATCCTCATGCTCTGTTTTCATCCATGTCCACTTTCGTTCATTCCTTTATTTTCTAGAATCGAAGGGGTTTAATATTATTGGTCATCTCGTATCGTTACTGAATTTCATTTCTTTTGTTTTTTCAGGCAGTATCGCCACTGAAGTTGACGAAGAAAAGAAGCGGAAAAGGTCATCGAAGAGGAGACTTCAACAAACGTCTTCCGATGAGACCGATCAACTCAATGTTAAGGCAGTAAATGCTTTAGAAGCACGTAACGGTATGTCAACTTCCTAAGTTCAGTACCGCAACCCTTTAGGTCCTTGTGAAAATAAATTATTTTGTTGTTAATTGGTATATTCTATCTACGTCCTCTGATAGCATGCGTTAACTTTCTTTTTTATTGTTGCTATGAAGCTTTTGCTTTCTTTGGTCTCATCTTAAACAAGGGTGGTTTGAGGCTTGTTGCTTTGGATATGCATGGGGTATTGCCAGTTGAGTTGGTTAAGCCATTGTTTTCTTGTTTAATATCTTGATGATTAGGCGAGTTTGGTGAGGGATTTCAATTTGCCAGTTGAGTTGGTTAAGCCATTGTTTACTTTTTTCAATAAAAGCTTGGTTTCATGTCAACAAAAAAATCTCTCCTTTCCTAGTGGGGGTGTGTCGATGATGATGGTGGGAGGGTTTTCAATTATGTGAAAGTTGTTCTCGGTAAAGTTGGTCCTAAGAGTCTGGAACAGGAATAGTGATGTGTTTGAGGGTTGTAAGTAAAAAAAAAAAAACAGGAGCTGTTATCAGTGGGAGTCAAGGTAAATCAATAGGTGTTTCACATAGAGTGGGGAACAAATCAGTTAAGGGGGAAATATTGTCTTCTGTACTTTTCTTGTACACTTTGCCCCTTTGTGGAAGACTGAAAGCCTTAAAATGGTGCCAAGTTTAGACAAGGATAGGGGAAGTCTAGGGGCCCTTTTTCATACTGGAAGAGATTAGGAAGATGGTTGTGGTTGTGAGTGACTTGGTGAAGGTAGAGTTGGATGATGTGTTTCAGCGAGTTAGATGAGAGAGGTATCTTGTACTATAATAATCCAAGGTTTCATTGAGAAATATAATTTGTACAAGAGACTAAAAAACAAACAAACAGCATCTAACAAACTACAGAAAGCAATCCCAATCCAAAAGAATAACACCTAAATAATAGAATGCAAATAGGTTGATAAAGGACAGTATGATTAATATATTTGAAGTATTACAGCTCTACTAATATTAGCATAGTCTCAGGGATATTGTTAGATGTGATGTCTTTTTGTTGTGGGTGTTGGTTGCTCCATTTTTTTAAATTATTAGATAGCTCTTATTCTTTCAAACTGGAATCTGTTTCTTAGATAGTGTTTGGACTCCTGTTGTGGGGCTGTTTTTTTTTTCCCCCCTTGTATATTGCTTCATTATGGTCAATGAAAGTTTGATTTGTCATTNTTTAAAAAAAAAAAAAAAAAAGAAGAAGAAAACTGATCCAGAAGTTGTCGTATTTGATCTTTGGGGTCTAGCAGTTTGTTTTGTGTACTAGTGCTTCTGAGGGTGCCCGAGACAATTGTTGTGCCAAGGAACATTGCTTAGCACACCTTCAAAACTAGAGGATGCTTTGGTGTGTTCATTCTTGTTCCCTTATGAAGCATTGGCATGAGATGAATAATATAATTTTTTGAGTGATCAGACTGGGTTAAGTTCTATTTGTCTCTTTGGGTTTACGTGACCAAGGAGTTGTGTAATTAATATGTCTTCTTTTAGAATTCTACCAACTATCCTTTCATTATTTTCTTTCTGTACTTCTTTGTCCCTGTCATGAAATTTATTAACTTGTTTATCTTCGTCCTGCAATTTAAGGCATAAGTGTAGTCAAGGAAGATTCGGATCAATTTGATGTGGAGGGAGAAGATGCTGAAAAGCCCAGGAAAACTGGTACTTAAACTGCCTCAACCTTTTTTGCAGCTGTCAGTCAATGTTACTGTTGCTGTGTGTGCTACCTTGGGAGTCTTTAGACATAACTGGTAGTTTTATTTGTAGATGAAGTAAAGAAAGAAAGGAAAAATAAAAAGAACCGCAAATCCTCAAACAATTGTGAAAACTCATTAGATAATGGAAGAGCTACGCAGCCGGAAGCTTATCGGCCCCTGGAGGACAGTGGTGCATTCTTGAAAGGTATTAAAAATAGGGATGGAGTTTAAGTGATATATTTTACTACTAGAATATCTCTTGAACTGATGTACTAACAGAAAAGTTTCTTGTAGGCAAGGCCAAAAAATCTTCCAAAAAGAAAAGAAATGATTCAAGTTCTCTGGATCCCAAGAAGTCGATAGAATCAAGTGATGATGTTAATGAAAATGATGTCTATCAAGTTTCTGTTGGAGATGAAGACACTTCAAAAGGGATGAAAAGTAAGAATTATGGGCATAATGTCATTTTATCTCAATGCTGCCCAATCTTCCCGCTTATTGTCAGAATTATTTTTTATTATTAGTGCCTCGGTTGTAATAACCCGCCCTTCCCTCTCCTGATGGCTGTGAAATAAACCTTTCAAGTTCTCTTTGACTTTTTCTTAATCATTTGCTGAAGCATTGGCCTGCTTTGCGAGTTTAGAGGGAGATTACTGTATCATTCACATTTTAATAAAATATTCTGTTGGGTCTTTTAAATTTCACATTGAGAACATTTTGGGCTGCAGAATGGATCAAAGAATATTATGAAAGTAGACCGGGATTGAAGGTACTGCAACAACGTATAGATGATTATATAACTGCACATGAGGCACGCCTAGAACAGGTAATGAATGTTTCCTTGAGCAATGACTCTACCTAAACCGTACATCCTTGTTTATCATGGCAAGTTCTGCCTCTTAAACTGATTTCATGAATTTTGAGTGTGATTTGGAGCTATATATCCCTTTAGGATGAAGAACACCAAAATACTTTTAAGATGCTGAAGATACTTGAGCATTGATTATGTCATCTAATAACAGTCATGCATCAGATGTGCATATTTAGCCGTGTATTGAGCTGTTTCACTTTGTTGTCACACAGGAAAAGGAAGAAAGGGAGGCTCAAGCAGCTGAAGGGGGATGGACAGTTGTTGTACATCAGAAAGGGAGAAAAAAGACCACGGATGCTGAAAGTGGGGTTACTGTGGGTTCGGTAGCGCAAAATGCTGTAGAGGATAAAATTTCCAAAAAGAAGCGGAAAGAAGTTGGGCTGGATTTCTATCGGTTCCAAAGAAGAGAAGCACAGAGGAATGGTATGGACAGTTATACTCCTAAAATCATAATAGATTTTATTCACACTTTCATATTTCAGCATTCCTTGGGATTTTTATATTTCGTGGTACTGGAGAAAGTAGTCCCAAGCAACTATTGGAATGGAGATTGTGTGTGCAGTGTCATTGCCTAATGTCTCATTCATTTTAACCTTTTTTTTTTTTTTTTTTAATCTGTTGTGCTATGTGTTCGCCATTGTTTTCCTTGAGCTTTCTGTATTCAGTTGGGGCCATATCAATGGTTGGTCTGCATGCTTGGGGCCATATCAGTGGTTGGTCTGCATGCATGCAAATTTTATTGGTTCAAAATTAAATGTTTTCTTCTTGGATTTTGTTTTACTCAACTCTAGTATTTTCCTTCTAGGAGGGTTATTTCTTTTGGGAATGTGCTAACACATAGCTGCTAACTTGGGGTGCGATAAACACTGGATATTCTATTCTAATTTCATTCGTCAATTTCTCATACAAGTGGATTGTTACAAGTGAAAGAAACATAAGATTTGACTTCGCTTAATATCTTATTTGTTGCAGAGATTCTGATGTTACAAAGTAAATTTGAGCAAGACAAGAAACGGATACAGCAATTGAGAGCTGCTAGAAAATTCCGCCCTTATTGAAGTTTTTGACCTACAACCACAAGGGCATGGCGGCTGGAGACTAGATTTTTTTCTTTTTTCCTTTTTTCCTTTTTTCCCTTCTTACCTCATATTTGTCAATTCAATTATAAACCATGGCGAATGATTTCAGGTGGCTAGGNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAACACTTGACCTTTCTATTTTTTGAAATGTAACATTAGTCTTTGCGTTTCATATTTAATGGACATCTTCCCAAGCAATTTGCATTTAAATCAAGCCGAGTGTATGCAATCTCTTTAACTAAATGTGATTTGGTTGTCTACCTACCAATATAAATTGATTATAAATAGAATTTTAAAGTCGCATTAGTGAAGGTTTTCTAATTACATTCAATTAAAATTTTACAGGCTA

mRNA sequence

AGAGAACAGAATAGATATTAAACACGGTTTATACATATATTAAAAATAAAAATAAAAATCAGAAAAATTGAAAGAATTTGTAGGATAAAAGAATTAATAATCTTTTTAACACACGGATTTCAACAATAGTCAAGCTATATGCATAAAATTAGCTAAATGCCTTTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGAATTAAATTTAAACATATTATTTTTAATAATACAAAATAGAAAAATGCTTCAAAAAGGAATTTGGCAACCCTAAACCCTTTCCATCATTCTCTCTCTCACGTGCTCCACCTTCTCCTCCTTCCTCTCGCCGGCTGCTCCTCCCTTTTAGTAGCTCTGTTCTGTCTTCCGACAGTGCCGCCGCAGCCTCCCTCCTAGCGGATTTTCTCTGATTTTCTACTCTCTTCTTGTTGCTGCTATTCTCCCAGTCTTCATAGTGAGATGGATAGACGGACGAAGAAGCGCGACAAAAGGCTTCGCGAGAGTAACACCGAACCTGCCGTTGCAAAGGGCAGTATCGCCACTGAAGTTGACGAAGAAAAGAAGCGGAAAAGGTCATCGAAGAGGAGACTTCAACAAACGTCTTCCGATGAGACCGATCAACTCAATGTTAAGGCAGTAAATGCTTTAGAAGCACGTAACGGCATAAGTGTAGTCAAGGAAGATTCGGATCAATTTGATGTGGAGGGAGAAGATGCTGAAAAGCCCAGGAAAACTGATGAAGTAAAGAAAGAAAGGAAAAATAAAAAGAACCGCAAATCCTCAAACAATTGTGAAAACTCATTAGATAATGGAAGAGCTACGCAGCCGGAAGCTTATCGGCCCCTGGAGGACAGTGGTGCATTCTTGAAAGGCAAGGCCAAAAAATCTTCCAAAAAGAAAAGAAATGATTCAAGTTCTCTGGATCCCAAGAAGTCGATAGAATCAAGTGATGATGTTAATGAAAATGATGTCTATCAAGTTTCTGTTGGAGATGAAGACACTTCAAAAGGGATGAAAAAATGGATCAAAGAATATTATGAAAGTAGACCGGGATTGAAGGTACTGCAACAACGTATAGATGATTATATAACTGCACATGAGGCACGCCTAGAACAGGAAAAGGAAGAAAGGGAGGCTCAAGCAGCTGAAGGGGGATGGACAGTTGTTGTACATCAGAAAGGGAGAAAAAAGACCACGGATGCTGAAAGTGGGGTTACTGTGGGTTCGGTAGCGCAAAATGCTGTAGAGGATAAAATTTCCAAAAAGAAGCGGAAAGAAGTTGGGCTGGATTTCTATCGGTTCCAAAGAAGAGAAGCACAGAGGAATGAGATTCTGATGTTACAAAGTAAATTTGAGCAAGACAAGAAACGGATACAGCAATTGAGAGCTGCTAGAAAATTCCGCCCTTATTGAAGTTTTTGACCTACAACCACAAGGGCATGGCGGCTGGAGACTAGATTTTTTTCTTTTTTCCTTTTTTCCTTTTTTCCCTTCTTACCTCATATTTGTCAATTCAATTATAAACCATGGCGAATGATTTCAGGTGGCTAGGNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAACACTTGACCTTTCTATTTTTTGAAATGTAACATTAGTCTTTGCGTTTCATATTTAATGGACATCTTCCCAAGCAATTTGCATTTAAATCAAGCCGAGTGTATGCAATCTCTTTAACTAAATGTGATTTGGTTGTCTACCTACCAATATAAATTGATTATAAATAGAATTTTAAAGTCGCATTAGTGAAGGTTTTCTAATTACATTCAATTAAAATTTTACAGGCTA

Coding sequence (CDS)

ATGGATAGACGGACGAAGAAGCGCGACAAAAGGCTTCGCGAGAGTAACACCGAACCTGCCGTTGCAAAGGGCAGTATCGCCACTGAAGTTGACGAAGAAAAGAAGCGGAAAAGGTCATCGAAGAGGAGACTTCAACAAACGTCTTCCGATGAGACCGATCAACTCAATGTTAAGGCAGTAAATGCTTTAGAAGCACGTAACGGCATAAGTGTAGTCAAGGAAGATTCGGATCAATTTGATGTGGAGGGAGAAGATGCTGAAAAGCCCAGGAAAACTGATGAAGTAAAGAAAGAAAGGAAAAATAAAAAGAACCGCAAATCCTCAAACAATTGTGAAAACTCATTAGATAATGGAAGAGCTACGCAGCCGGAAGCTTATCGGCCCCTGGAGGACAGTGGTGCATTCTTGAAAGGCAAGGCCAAAAAATCTTCCAAAAAGAAAAGAAATGATTCAAGTTCTCTGGATCCCAAGAAGTCGATAGAATCAAGTGATGATGTTAATGAAAATGATGTCTATCAAGTTTCTGTTGGAGATGAAGACACTTCAAAAGGGATGAAAAAATGGATCAAAGAATATTATGAAAGTAGACCGGGATTGAAGGTACTGCAACAACGTATAGATGATTATATAACTGCACATGAGGCACGCCTAGAACAGGAAAAGGAAGAAAGGGAGGCTCAAGCAGCTGAAGGGGGATGGACAGTTGTTGTACATCAGAAAGGGAGAAAAAAGACCACGGATGCTGAAAGTGGGGTTACTGTGGGTTCGGTAGCGCAAAATGCTGTAGAGGATAAAATTTCCAAAAAGAAGCGGAAAGAAGTTGGGCTGGATTTCTATCGGTTCCAAAGAAGAGAAGCACAGAGGAATGAGATTCTGATGTTACAAAGTAAATTTGAGCAAGACAAGAAACGGATACAGCAATTGAGAGCTGCTAGAAAATTCCGCCCTTATTGA

Protein sequence

MDRRTKKRDKRLRESNTEPAVAKGSIATEVDEEKKRKRSSKRRLQQTSSDETDQLNVKAVNALEARNGISVVKEDSDQFDVEGEDAEKPRKTDEVKKERKNKKNRKSSNNCENSLDNGRATQPEAYRPLEDSGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDTSKGMKKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTTDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQQLRAARKFRPY
Homology
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BLAST of Cp4.1LG01g06530 vs. Swiss-Prot
Match: RRP7A_HUMAN (Ribosomal RNA-processing protein 7 homolog A OS=Homo sapiens GN=RRP7A PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 2.6e-12
Identity = 50/147 (34.01%), Postives = 83/147 (56.46%), Query Frame = 1 

Query: 174 VSVGDEDTSKGMKKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEK---EEREAQAAE 233
           VS        G+ KWI +Y +S P  + L+  +D ++ A++ ++ +E+   +E E    E
Sbjct: 141 VSTESHPVKSGIHKWISDYADSVPDPEALRVEVDTFMEAYDQKIAEEEAKAKEEEGVPDE 200

Query: 234 GGWTVVVHQKGRKKTTDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNE 293
            GW V V ++GR+         ++       +E +  K+ RKE+ L+FY +Q RE++   
Sbjct: 201 EGW-VKVTRRGRRPVLPRTEAASL-----RVLERERRKRSRKEL-LNFYAWQHRESKMEH 260

Query: 294 ILMLQSKFEQDKKRIQQLRAARKFRPY 318
           +  L+ KFE+DK+RI+ LRA RKFRPY
Sbjct: 261 LAQLRKKFEEDKQRIELLRAQRKFRPY 280

[Close]
BLAST of Cp4.1LG01g06530 vs. Swiss-Prot
Match: RRP7A_PONAB (Ribosomal RNA-processing protein 7 homolog A OS=Pongo abelii GN=RRP7A PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.5e-12
Identity = 50/147 (34.01%), Postives = 83/147 (56.46%), Query Frame = 1 

Query: 174 VSVGDEDTSKGMKKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEK---EEREAQAAE 233
           VS        G+ KWI +Y +S P  + L+  +D ++ A++ ++ +E+   +E E    E
Sbjct: 141 VSTESHPVKTGIHKWISDYADSVPDPEALRVEVDTFMEAYDQKIAEEEAKAKEEEGVPDE 200

Query: 234 GGWTVVVHQKGRKKTTDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNE 293
            GW V V ++GR+         ++       +E +  K+ RKE+ L+FY +Q RE++   
Sbjct: 201 EGW-VKVTRRGRRPVLPRTEAASL-----RVLERERRKRTRKEL-LNFYAWQHRESKMEH 260

Query: 294 ILMLQSKFEQDKKRIQQLRAARKFRPY 318
           +  L+ KFE+DK+RI+ LRA RKFRPY
Sbjct: 261 LAQLRKKFEEDKQRIELLRAQRKFRPY 280

[Close]
BLAST of Cp4.1LG01g06530 vs. Swiss-Prot
Match: RRP7A_MOUSE (Ribosomal RNA-processing protein 7 homolog A OS=Mus musculus GN=Rrp7a PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-10
Identity = 48/147 (32.65%), Postives = 81/147 (55.10%), Query Frame = 1 

Query: 174 VSVGDEDTSKGMKKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEK---EEREAQAAE 233
           VS        G+ KWI +Y +S    + L+  +D ++ A++ ++ +E+   +E E    E
Sbjct: 141 VSTESHLVKSGIHKWISDYEDSVLDPEALRMEVDAFMEAYDKKIAEEEAKAKEEEGVPDE 200

Query: 234 GGWTVVVHQKGRKKTTDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNE 293
            GW V V ++GR+         ++       +E +  K+ RKE+ L+FY +Q RE +   
Sbjct: 201 EGW-VKVTRRGRRPVLPRTEAASL-----RVLEKEKRKRARKEL-LNFYAWQHRETKMEH 260

Query: 294 ILMLQSKFEQDKKRIQQLRAARKFRPY 318
           +  L+ KFE+DK+RI+ +RA RKFRPY
Sbjct: 261 LAQLRKKFEEDKQRIELMRAQRKFRPY 280

[Close]
BLAST of Cp4.1LG01g06530 vs. Swiss-Prot
Match: RRP7_SCHPO (Ribosomal RNA-processing protein 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rrp7 PE=3 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 7.4e-07
Identity = 46/137 (33.58%), Postives = 70/137 (51.09%), Query Frame = 1 

Query: 184 GMKKWIKEYYESRPGLKVLQQRIDDY---ITAHEARLEQEKEEREAQAAEGGWTVVVHQK 243
           G+K++++ Y       +VL + +D Y   +T  E   ++     + Q  E G+  VV   
Sbjct: 114 GLKRYVESYDRQFVNPRVLAESVDSYMKRVTKKEIAEKRRLFAMKNQPDEDGFVTVVR-- 173

Query: 244 GRKKTTDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQ 303
                    SG       Q+A E ++ KKK   +  DFYRFQ RE ++  +L L  KFE 
Sbjct: 174 ---------SGRAPVGRPQDA-ERQLEKKKDTGIHKDFYRFQLREKKKKALLDLAHKFEF 233

Query: 304 DKKRIQQLRAARKFRPY 318
           DK+RIQQL+  R+F+PY
Sbjct: 234 DKQRIQQLKEKRQFKPY 238

[Close]
BLAST of Cp4.1LG01g06530 vs. TrEMBL
Match: A0A0A0KSY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G290150 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.5e-78
Identity = 161/196 (82.14%), Postives = 181/196 (92.35%), Query Frame = 1 

Query: 122 QPEAYRPLEDSGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDT 181
           Q EA +P E+ GAFLKGKAKKSSKKKR DSSSLD K S E  +D++ENDVYQ+S GD+D+
Sbjct: 2   QLEACQPFEN-GAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISSGDDDS 61

Query: 182 SKGMKKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKG 241
           SKGMK+WI EY++SRPGL VLQQRIDDYITAHEA+LEQEK+EREAQAAEGGWTVVVHQKG
Sbjct: 62  SKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKG 121

Query: 242 RKKTTDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQD 301
           RKKTTDAESGVTVGSVAQN++ DK+SKKK+ EVGLDFYRFQRREAQRNE++MLQSKFEQD
Sbjct: 122 RKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQSKFEQD 181

Query: 302 KKRIQQLRAARKFRPY 318
           +KRIQQLRAARKFRPY
Sbjct: 182 RKRIQQLRAARKFRPY 196

[Close]
BLAST of Cp4.1LG01g06530 vs. TrEMBL
Match: A0A067EUP7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041939mg PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.4e-65
Identity = 160/307 (52.12%), Postives = 211/307 (68.73%), Query Frame = 1 

Query: 27  ATEVDEEKKRKRSSKRRLQQTSSDETDQLNVKAVNALEARNGISVVK-EDSDQFDVEGED 86
           + E  + KK+    KR+  Q S  + + + VK  N     +G   +K E  + FDV    
Sbjct: 3   SAEKKQRKKKPNLKKRKNSQLSETDENLITVKEDNEQNKPSGKKKIKREKGNSFDVRDVQ 62

Query: 87  AEKPRKTDEVKKERKNKKNRKSS--------------NNCENSLDNGRATQPEAYRPLED 146
               +   E K+ +  KK R+                ++ +NS +N  A   +  + +E+
Sbjct: 63  DNSNKAAKEKKRNKSKKKLRREEKSNATPIDEVGEHGDDADNSNENLVAGASQVKKEIEN 122

Query: 147 SGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSD-DVNENDVYQVSVGDEDTSKGMKKWIK 206
            G  + GK+KK+ KKK+ D  SL   + +E +  D +E+DVY +S GDE  SKGMKKW+ 
Sbjct: 123 PGRPV-GKSKKARKKKKKDRGSLMKDEELEENTRDADEDDVYMISSGDEHCSKGMKKWVT 182

Query: 207 EYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTTDAES 266
           EY++SRPGLKVLQQRID++ITAHEA+LEQE++EREA+AAEGGWTVVVH KGRKKTTDAES
Sbjct: 183 EYHQSRPGLKVLQQRIDEFITAHEAKLEQERKEREARAAEGGWTVVVHHKGRKKTTDAES 242

Query: 267 GVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQQLRA 318
           G+ VGSVAQ AVEDK++KKK+K+VGLDFYRFQRREA+RNEI++LQSKFEQD+KRIQQLRA
Sbjct: 243 GIAVGSVAQAAVEDKMAKKKKKDVGLDFYRFQRREAKRNEIMLLQSKFEQDRKRIQQLRA 302

[Close]
BLAST of Cp4.1LG01g06530 vs. TrEMBL
Match: V4STN5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012260mg PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 3.2e-65
Identity = 160/311 (51.45%), Postives = 211/311 (67.85%), Query Frame = 1 

Query: 27  ATEVDEEKKRKRSSKRRLQQTSSDETDQLNVKAVNALEARNGISVVK-EDSDQFDVEGED 86
           + E  + KK+    KR+  Q S  + + + VK  N     +G   +K E  + FDV    
Sbjct: 3   SAEKKQRKKKPNFKKRKNSQLSETDENLITVKEDNEQNKPSGKKKIKREKGNSFDVSDVQ 62

Query: 87  AEKPRKTDEVKKERKNKKNRKSS------------------NNCENSLDNGRATQPEAYR 146
               +   E K+ +  KK R+                    ++ +NS +N  A   +  +
Sbjct: 63  DNSNKAAKEKKRNKSKKKLRREEKSNATPIDEVGEHGAEDGDDADNSNENLVAGASQVKK 122

Query: 147 PLEDSGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSD-DVNENDVYQVSVGDEDTSKGMK 206
            +E+ G  + GK+KK+ KKK+ D  SL   + +E +  D +E+DVY +S GDED SKGMK
Sbjct: 123 EIENPGRPV-GKSKKARKKKKKDRGSLMKDEELEENTRDADEDDVYMISSGDEDCSKGMK 182

Query: 207 KWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTT 266
           KW+ EY++SRPGLKV QQRID++ITAHEA+LEQE++EREA+AAEGGWTVVVH KGRKKTT
Sbjct: 183 KWVTEYHQSRPGLKVFQQRIDEFITAHEAKLEQERKEREARAAEGGWTVVVHHKGRKKTT 242

Query: 267 DAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQ 318
           DAESG+ VGSVAQ AVEDK++KKK+K+VGLDFYRFQRREA+RNEI++LQSKFEQD+KRIQ
Sbjct: 243 DAESGIAVGSVAQAAVEDKMAKKKKKDVGLDFYRFQRREAKRNEIMLLQSKFEQDRKRIQ 302

[Close]
BLAST of Cp4.1LG01g06530 vs. TrEMBL
Match: W9S2Z9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009674 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.4e-59
Identity = 164/323 (50.77%), Postives = 206/323 (63.78%), Query Frame = 1 

Query: 2   DRRTKKRDKRLRESNTEPAVAKG-SIATE---VDEEKKRKRSSKRRLQQTSSDETDQLNV 61
           D+  +K+ KR +E +    +  G  I T+   +   KK+K +   R ++  + E D   V
Sbjct: 37  DQLVEKKRKRKKELSV--GIVHGVQIPTQDNAIRTGKKKKGAKSPRNKRVKNVENDNSLV 96

Query: 62  KAVNALEARNGISVVKEDSDQFDVEGEDAEKPRKTDEVKKERKNKKNRKSSNNCENSLDN 121
              N  E   G             +G DAE  R     KK R+ +K + S    E   + 
Sbjct: 97  SKSNQAENETG-------------DGFDAENGRS----KKARRKEKEQNSLMELEKLPER 156

Query: 122 GRATQPEAYRPLEDSGAFL---KGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQV 181
           G A Q E +         L   KGK+K+  KKK+ D +S    KS E+    +E+DVY V
Sbjct: 157 GDADQTEVFHVSTADADPLTRKKGKSKEVKKKKKKDRNSSKVVKSQETEGGADEDDVYVV 216

Query: 182 SVGDEDTSKGMKKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWT 241
           S GDED SKGMKKWI E ++SRPGL +LQQRID++ITAHE +LEQE++EREA+AAEGGWT
Sbjct: 217 SSGDEDCSKGMKKWITESHQSRPGLTILQQRIDEFITAHEEKLEQERKEREARAAEGGWT 276

Query: 242 VVVHQKGRKKTTDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILML 301
           VV H KGRKKTTDAE+G+TVGSVAQ   E  ++KKK KEVGLDFYRFQR+EAQRNE++ML
Sbjct: 277 VVTHHKGRKKTTDAETGMTVGSVAQAVAEGNLAKKKSKEVGLDFYRFQRKEAQRNELMML 336

Query: 302 QSKFEQDKKRIQQLRAARKFRPY 318
           QSKFEQDKKRIQQLRAARKFRPY
Sbjct: 337 QSKFEQDKKRIQQLRAARKFRPY 340

[Close]
BLAST of Cp4.1LG01g06530 vs. TrEMBL
Match: A0A059ASH3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02096 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.8e-59
Identity = 124/188 (65.96%), Postives = 156/188 (82.98%), Query Frame = 1 

Query: 131 DSGAFLKGKAKKSSKKKRND-SSSLDPKKSIESSDDVNENDVYQVSVGDEDTSKGMKKWI 190
           D+    K K+KK+ +KK     S  D  + ++ + + + +DV+Q+S GDED SKGMKKW+
Sbjct: 65  DTSEVRKSKSKKARRKKGKPLQSPRDIDQVVDKNSEPDLDDVHQISSGDEDESKGMKKWL 124

Query: 191 KEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTTDAE 250
            EYY+ RPG+++LQQRIDD+IT HE +LEQE++EREA+ AEGGWTVV H KGRKKTTD+E
Sbjct: 125 AEYYQKRPGIEILQQRIDDFITTHETKLEQERKEREARVAEGGWTVVTHHKGRKKTTDSE 184

Query: 251 SGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQQLR 310
           SG+ VGSV+Q A+EDK++KKKRKEVG DFYRFQRREAQRNEI+ML+SKFEQD+KRIQQLR
Sbjct: 185 SGIVVGSVSQAALEDKLAKKKRKEVGSDFYRFQRREAQRNEIMMLRSKFEQDRKRIQQLR 244

Query: 311 AARKFRPY 318
           AARKFRPY
Sbjct: 245 AARKFRPY 252

[Close]
BLAST of Cp4.1LG01g06530 vs. TAIR10
Match: AT5G38720.1 (AT5G38720.1 unknown protein)

HSP 1 Score: 199.9 bits (507), Expect = 2.3e-51
Identity = 141/316 (44.62%), Postives = 204/316 (64.56%), Query Frame = 1 

Query: 7   KRDKRLRESNTEPAVAKGSIATEVDEEKKRKRSSKRRLQQTSSDETDQLNVKAVNALEAR 66
           +R K  + SN E  +++   A ++ + K  ++ +++++Q+    ++   + K    ++ R
Sbjct: 23  QRKKNEKVSNVE--LSEDPQAAQL-QAKSSEKPNRKKIQKGKEIKSSPADGKLSGKMKKR 82

Query: 67  NGISVVKEDSDQFDVEGEDAEKPRKTDEVKKER----KNKKNRKSSNNCENSLDNGRATQ 126
                 KE     D+  E   +   T++VK+++    K KK RK+     +S+++ +   
Sbjct: 83  ------KEKVGNVDIS-EPILEAISTEKVKEKKGKMNKTKKKRKAEEITRSSVEDLKR-- 142

Query: 127 PEAYRPLEDSGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDTS 186
                         + K KKS+KKK+ D +S    K  E      E DVYQ+S GDED +
Sbjct: 143 --------------ESKFKKSNKKKKMDMTSKKENKIEE------EEDVYQISSGDEDCT 202

Query: 187 KGMKKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGR 246
           +GMKKW+ +YYE RPGL  LQ+RIDD++TAHE RLEQEK+++EA+AAEGGWTVVVH KGR
Sbjct: 203 RGMKKWVSDYYEGRPGLDELQKRIDDFMTAHEERLEQEKQDKEAKAAEGGWTVVVHHKGR 262

Query: 247 KKTTDAESGVTVGSVAQNAVEDKISKKKRKE-VGLDFYRFQRREAQRNEILMLQSKFEQD 306
           KKTT++E+G  VGS +Q A+EDKI+KKK+ E V   FYRFQRR+AQRNE+L LQSKFE+D
Sbjct: 263 KKTTESETGTAVGSFSQAALEDKIAKKKQSEPVAHGFYRFQRRDAQRNELLALQSKFEED 306

Query: 307 KKRIQQLRAARKFRPY 318
           KKRIQQLRAAR+F+P+
Sbjct: 323 KKRIQQLRAARRFKPF 306

[Close]
BLAST of Cp4.1LG01g06530 vs. NCBI nr
Match: gi|778701950|ref|XP_004140427.2| (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X1 [Cucumis sativus])

HSP 1 Score: 372.9 bits (956), Expect = 5.7e-100
Identity = 201/250 (80.40%), Postives = 231/250 (92.40%), Query Frame = 1 

Query: 68  GISVVKEDSDQFDVEGEDAEKPRKTDEVKKERKNKKNRKSSNNCENSLDNGRATQPEAYR 127
           G++VV  DSDQF VEGEDAEKP+K+D++KK+RKNKKNRKSSN+C+NSL+NGRA Q EA +
Sbjct: 20  GLTVVNADSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCDNSLENGRAMQLEACQ 79

Query: 128 PLEDSGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDTSKGMKK 187
           P E+ GAFLKGKAKKSSKKKR DSSSLD K S E  +D++ENDVYQ+S GD+D+SKGMK+
Sbjct: 80  PFEN-GAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISSGDDDSSKGMKR 139

Query: 188 WIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTTD 247
           WI EY++SRPGL VLQQRIDDYITAHEA+LEQEK+EREAQAAEGGWTVVVHQKGRKKTTD
Sbjct: 140 WITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKGRKKTTD 199

Query: 248 AESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQQ 307
           AESGVTVGSVAQN++ DK+SKKK+ EVGLDFYRFQRREAQRNE++MLQSKFEQD+KRIQQ
Sbjct: 200 AESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQSKFEQDRKRIQQ 259

Query: 308 LRAARKFRPY 318
           LRAARKFRPY
Sbjct: 260 LRAARKFRPY 268

[Close]
BLAST of Cp4.1LG01g06530 vs. NCBI nr
Match: gi|778701953|ref|XP_011655116.1| (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X2 [Cucumis sativus])

HSP 1 Score: 367.9 bits (943), Expect = 1.8e-98
Identity = 199/246 (80.89%), Postives = 227/246 (92.28%), Query Frame = 1 

Query: 72  VKEDSDQFDVEGEDAEKPRKTDEVKKERKNKKNRKSSNNCENSLDNGRATQPEAYRPLED 131
           V  DSDQF VEGEDAEKP+K+D++KK+RKNKKNRKSSN+C+NSL+NGRA Q EA +P E+
Sbjct: 20  VNADSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCDNSLENGRAMQLEACQPFEN 79

Query: 132 SGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDTSKGMKKWIKE 191
            GAFLKGKAKKSSKKKR DSSSLD K S E  +D++ENDVYQ+S GD+D+SKGMK+WI E
Sbjct: 80  -GAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISSGDDDSSKGMKRWITE 139

Query: 192 YYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTTDAESG 251
           Y++SRPGL VLQQRIDDYITAHEA+LEQEK+EREAQAAEGGWTVVVHQKGRKKTTDAESG
Sbjct: 140 YHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKGRKKTTDAESG 199

Query: 252 VTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQQLRAA 311
           VTVGSVAQN++ DK+SKKK+ EVGLDFYRFQRREAQRNE++MLQSKFEQD+KRIQQLRAA
Sbjct: 200 VTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQSKFEQDRKRIQQLRAA 259

Query: 312 RKFRPY 318
           RKFRPY
Sbjct: 260 RKFRPY 264

[Close]
BLAST of Cp4.1LG01g06530 vs. NCBI nr
Match: gi|659113953|ref|XP_008456839.1| (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X1 [Cucumis melo])

HSP 1 Score: 367.9 bits (943), Expect = 1.8e-98
Identity = 199/250 (79.60%), Postives = 230/250 (92.00%), Query Frame = 1 

Query: 68  GISVVKEDSDQFDVEGEDAEKPRKTDEVKKERKNKKNRKSSNNCENSLDNGRATQPEAYR 127
           G+ VV  DSDQF+VEGEDAEKP+K+D++KK+RKNK NR+SSN+C+N L+NGRA Q EA +
Sbjct: 20  GLIVVHADSDQFNVEGEDAEKPKKSDKLKKDRKNKNNRQSSNDCDNLLENGRAMQLEACQ 79

Query: 128 PLEDSGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDTSKGMKK 187
           PLE+ GAFLKGKAKKSSKKKR DSSSLD K S E  +D++ENDVYQ+S GD+D+SKGMK+
Sbjct: 80  PLEN-GAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISSGDDDSSKGMKR 139

Query: 188 WIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTTD 247
           WI EY++SRPGL +LQQRIDDYITAHEA+LEQEK+EREAQAAEGGWTVVVHQKGRKKTTD
Sbjct: 140 WITEYHKSRPGLNLLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKGRKKTTD 199

Query: 248 AESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQQ 307
           AESGVTVGSVAQN++ DKISKKK+ EVGLDFYRFQRREAQRNE++MLQSKFEQD+KRIQQ
Sbjct: 200 AESGVTVGSVAQNSLGDKISKKKKNEVGLDFYRFQRREAQRNEVMMLQSKFEQDRKRIQQ 259

Query: 308 LRAARKFRPY 318
           LRAARKFRPY
Sbjct: 260 LRAARKFRPY 268

[Close]
BLAST of Cp4.1LG01g06530 vs. NCBI nr
Match: gi|778701957|ref|XP_004140428.2| (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X3 [Cucumis sativus])

HSP 1 Score: 367.9 bits (943), Expect = 1.8e-98
Identity = 199/246 (80.89%), Postives = 228/246 (92.68%), Query Frame = 1 

Query: 72  VKEDSDQFDVEGEDAEKPRKTDEVKKERKNKKNRKSSNNCENSLDNGRATQPEAYRPLED 131
           V +DSDQF VEGEDAEKP+K+D++KK+RKNKKNRKSSN+C+NSL+NGRA Q EA +P E+
Sbjct: 17  VVKDSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCDNSLENGRAMQLEACQPFEN 76

Query: 132 SGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDTSKGMKKWIKE 191
            GAFLKGKAKKSSKKKR DSSSLD K S E  +D++ENDVYQ+S GD+D+SKGMK+WI E
Sbjct: 77  -GAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISSGDDDSSKGMKRWITE 136

Query: 192 YYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTTDAESG 251
           Y++SRPGL VLQQRIDDYITAHEA+LEQEK+EREAQAAEGGWTVVVHQKGRKKTTDAESG
Sbjct: 137 YHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKGRKKTTDAESG 196

Query: 252 VTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQQLRAA 311
           VTVGSVAQN++ DK+SKKK+ EVGLDFYRFQRREAQRNE++MLQSKFEQD+KRIQQLRAA
Sbjct: 197 VTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQSKFEQDRKRIQQLRAA 256

Query: 312 RKFRPY 318
           RKFRPY
Sbjct: 257 RKFRPY 261

[Close]
BLAST of Cp4.1LG01g06530 vs. NCBI nr
Match: gi|659113955|ref|XP_008456840.1| (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X2 [Cucumis melo])

HSP 1 Score: 365.2 bits (936), Expect = 1.2e-97
Identity = 197/249 (79.12%), Postives = 229/249 (91.97%), Query Frame = 1 

Query: 69  ISVVKEDSDQFDVEGEDAEKPRKTDEVKKERKNKKNRKSSNNCENSLDNGRATQPEAYRP 128
           ++ V  DSDQF+VEGEDAEKP+K+D++KK+RKNK NR+SSN+C+N L+NGRA Q EA +P
Sbjct: 17  VAKVHADSDQFNVEGEDAEKPKKSDKLKKDRKNKNNRQSSNDCDNLLENGRAMQLEACQP 76

Query: 129 LEDSGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDTSKGMKKW 188
           LE+ GAFLKGKAKKSSKKKR DSSSLD K S E  +D++ENDVYQ+S GD+D+SKGMK+W
Sbjct: 77  LEN-GAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISSGDDDSSKGMKRW 136

Query: 189 IKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTTDA 248
           I EY++SRPGL +LQQRIDDYITAHEA+LEQEK+EREAQAAEGGWTVVVHQKGRKKTTDA
Sbjct: 137 ITEYHKSRPGLNLLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKGRKKTTDA 196

Query: 249 ESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQQL 308
           ESGVTVGSVAQN++ DKISKKK+ EVGLDFYRFQRREAQRNE++MLQSKFEQD+KRIQQL
Sbjct: 197 ESGVTVGSVAQNSLGDKISKKKKNEVGLDFYRFQRREAQRNEVMMLQSKFEQDRKRIQQL 256

Query: 309 RAARKFRPY 318
           RAARKFRPY
Sbjct: 257 RAARKFRPY 264

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g06530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RRP7A_HUMAN2.6e-1234.01Ribosomal RNA-processing protein 7 homolog A OS=Homo sapiens GN=RRP7A PE=1 SV=2[more]
RRP7A_PONAB4.5e-1234.01Ribosomal RNA-processing protein 7 homolog A OS=Pongo abelii GN=RRP7A PE=2 SV=1[more]
RRP7A_MOUSE1.4e-1032.65Ribosomal RNA-processing protein 7 homolog A OS=Mus musculus GN=Rrp7a PE=2 SV=1[more]
RRP7_SCHPO7.4e-0733.58Ribosomal RNA-processing protein 7 OS=Schizosaccharomyces pombe (strain 972 / AT... [more]
BLAST of Cp4.1LG01g06530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSY1_CUCSA2.5e-7882.14Uncharacterized protein OS=Cucumis sativus GN=Csa_5G290150 PE=4 SV=1[more]
A0A067EUP7_CITSI2.4e-6552.12Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041939mg PE=4 SV=1[more]
V4STN5_9ROSI3.2e-6551.45Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012260mg PE=4 SV=1[more]
W9S2Z9_9ROSA3.4e-5950.77Uncharacterized protein OS=Morus notabilis GN=L484_009674 PE=4 SV=1[more]
A0A059ASH3_EUCGR5.8e-5965.96Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02096 PE=4 SV=1[more]
BLAST of Cp4.1LG01g06530 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G38720.12.3e-5144.62 unknown protein[more]
BLAST of Cp4.1LG01g06530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778701950|ref|XP_004140427.2|5.7e-10080.40PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X1 [Cucumis sati... [more]
gi|778701953|ref|XP_011655116.1|1.8e-9880.89PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X2 [Cucumis sati... [more]
gi|659113953|ref|XP_008456839.1|1.8e-9879.60PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X1 [Cucumis melo... [more]
gi|778701957|ref|XP_004140428.2|1.8e-9880.89PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X3 [Cucumis sati... [more]
gi|659113955|ref|XP_008456840.1|1.2e-9779.12PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X2 [Cucumis melo... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR024326RRP7
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g06530.1Cp4.1LG01g06530.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024326Ribosomal RNA-processing protein 7PANTHERPTHR13191RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATEDcoord: 158..317
score: 1.4
IPR024326Ribosomal RNA-processing protein 7PFAMPF12923RRP7coord: 184..317
score: 1.5
NoneNo IPR availableunknownCoilCoilcoord: 210..230
scor
NoneNo IPR availablePANTHERPTHR13191:SF0RIBOSOMAL RNA-PROCESSING PROTEIN 7 HOMOLOG A-RELATEDcoord: 158..317
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g06530CmaCh04G000210Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g06530CmoCh04G000220Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g06530Cla016887Watermelon (97103) v1cpewmB460
Cp4.1LG01g06530CSPI05G12580Wild cucumber (PI 183967)cpecpiB432
Cp4.1LG01g06530Bhi07G000128Wax gourdcpewgoB0564
Cp4.1LG01g06530Carg21977Silver-seed gourdcarcpeB0258
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g06530Melon (DHL92) v3.6.1cpemedB434
Cp4.1LG01g06530Silver-seed gourdcarcpeB0939
Cp4.1LG01g06530Cucumber (Chinese Long) v3cpecucB0532
Cp4.1LG01g06530Cucurbita pepo (Zucchini)cpecpeB374
Cp4.1LG01g06530Cucurbita maxima (Rimu)cmacpeB723
Cp4.1LG01g06530Cucurbita moschata (Rifu)cmocpeB675
Cp4.1LG01g06530Wild cucumber (PI 183967)cpecpiB456
Cp4.1LG01g06530Bottle gourd (USVL1VR-Ls)cpelsiB320
Cp4.1LG01g06530Watermelon (Charleston Gray)cpewcgB361
Cp4.1LG01g06530Watermelon (97103) v1cpewmB468
Cp4.1LG01g06530Melon (DHL92) v3.5.1cpemeB388
Cp4.1LG01g06530Cucumber (Gy14) v2cgybcpeB642