CmoCh04G000220 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G000220
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ribosomal RNA-processing protein 7 like A
Location	Cmo_Chr04 : 115771 .. 121362 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAACCCTTTCCATCATTCTCTCTCTCACGTGCTCCACCTTCTCCTTCTTCCTCTCGCCGGCTGCTCCTCCCTTTTAGTAGCTCTGTTCTGTCTTCCGACTGTGCCGCCGCAGCCTCCCTCCTAGCGGATTTTCTCTGATTTTCTACTCTCTTCTTGTTACTGCTATTCTCCCAGTCTTCATGTCCGTCTTTTTTCTCGGTTGAACTATTCGGATTAAGACATATGTCTGCATTTTTATTTATGACATATTTCTGTCAATTGGGCTTTCATCATCTGTATATCTTTTGCTAATAATTAACTTATTCTTTGCTTGTGTTTCGGGAGCACAGAGTGAGATGGATAGACGGACGAAGAAGCGCGACAAAAGGCTTCGCGAGAGTAACACCGAACCTGCCGTTGCAAAGGGTTTGTTTTTTACTTGCTACCTTGTATACTATATGCTTACTTTCTCATTACTTCTTCAGTTATCTTCGAACGGACTAGAACAAAGGTTGAAGAATATCTGCTTCTGGACTCCATTAATACCTTGAACTCCTAATTGTGTCTCCCTTCCTTCGGCACAGCATGTTTTTGTTTATTGGTTTTTAGTGCTTACCCCTATGGGTGATGGGGTTACCTATTTAATCCTCATGCTCTGTTTTCATCCATGTCCACTTTCGTTCATTCCTTTATTTTCTAGAATGAAGGGGTTTAATATTATTGGTCATCTCGTATCGTTACTAAATTTCATTTCTTTTGTTTTTTCAGGCAGTATCGCCACTGAAGTTGACGAAGAAAAGAAGCGGAGAAGGTCATCGAAGAGGAGACTTCAACAAACGTCTTCCGATGAGACCGATCAACTCAATGTTAAGGCAGTAAATGCTTTAGAAGCACGTAACGGTATGTCAACTTCCTAAGTTCAGTACCGCAACCCTGTAGGTCCTTGTGAAAATAAATTGTTTTGTTGTTAATTGGTATATTCTATCTACGTCCTCTGATAGCATGCGTTAACTTTCTTTTTTATTATTGCTATGAAGCTTTTGCTTTCTTTGGTCTCATCTTAAATAAGGGTGGTTTAAGGCTTGTTGCTTTGGATATGCATGGGGTATTGCCAGTTGAGTTGGTTAAGCCATTGTTTTCTTGTTTAATATCTTGATAATTAGGCGAGTTTGGTGAGGGATTTCAATTTTCCTAGGGTTCTTGTGGTGAAAATGAGTGAGGGTGGCTTTTCCAGGTTTGTGAGGGAGTTTAATACGTTTATCAAGGAATTAGGATTTGAACTCTTGGACCTTCCTCTTGTTAATAGTAGATTTATGTGGCCCGACTTAATGACTTGGAGTTAGTTTTCTTTTAATCATTGGCCTATCTTTTGGGGTATAGGTCATACGTTTATCAAGGAATTTTGGATTTGAACTCTTGGACCTTCCTCTTGTTAATAGTAGATTTATGTGGCCCGACTTAATGACTTGGAGTTACTTTTCTTTTGATCATTGGCCTATCTTTTGGGGTATAGGTCCTATTTCGTGTGGTCCTGCCCTTCTAGATTTGGAAATATATTGCTCTCTCATCCCTCTTTAACATGCTCATTCCTTTTCTAGTGGTGACTTTTAAGGAGTCATTGATTATTTGGGCTATCAGTTTTCTTATTCTCTTTGGAGTCGTTGCCTTGTGCTTGGGGTGGCGTGGGTGCATAACAAGGATTGTCTAACCATGGTTAAGGAGATCTTGATGGACTCACCCTTTTGTGAAAAGGGAAGAGTGTTGTGACAATGTTCCTTCTCTATTTTATGGGAGGTGCGGCTTGAGAGGATTTACATTATGTTTAGAGGGGCTGAGAGATAATTGGAAGAGCTGTAGGAGGTGTTGAGGTTTAATAGCTCTTTATGGGCATCCATGAATTTGATTTTTTGTTGTAATTATCAGATAGGTTTTATTTTTTTGGATCAAAGTCCTTATAGATAGTCGAGGACTCCTTTTGTGGCTTTGTTTTGTATGTCTTTGTACATTGTTTACTTTTTTCAATAAAAGCTTGGTTTCATGTCAACAAAAAAATCTCTCCTTTCCTAGTGGGGGTGTGTCGATGATGATGGTGGGAGGGTTTTCAATTATGTTAAAGTTGTTCTCGGTAAAGTTGGTTTTAAGAGTCTGGAACAGGAATAGTGATGTGTTTGAGGGTTGTAAGTAAAAAAAAAAAAAAAAACAGGAGCTGTTAGTCAGTGGGAGTCAAGGTAAATCAATAGGTGTTTCACATAGAGTGGGGAACAAATCAGTTAAGGGGGAAATATTGTCTTCTGTACTTTTCTTGTACACTATGCCCCTTTGTGGAAGACTGAAAGCCTTAAAATGGTGCCAAGTTTAGATAAGGATAGGGGAAGTCTAGTGGCCCTTTTTCATACTGGAAGAGATTAGGAAGATGGTTGTGGTTCTGAGTGACTTGGTGAAGGTAGAGTAGGATGATGTGTTTCAGCGAGTTAGATGAGAGAGGTATCTTGTACTATAATAATCCAAGGTTTCATTGAGAAATATAATTTGTACAAGAGCATAAAAAACAAACAAACAGCATCTAACAAACTACAGAAAGCAATCCCAATCCAAAAGAGTAACGCCTAAATAATAGAATGCAAATAGGTTGATAAAGGACAGTATGACTAATATATTTGAAGTATTACAGCTCTACTAATATTAGCATAGTCTCAGGGATATTGTTAGATGTGATGTCTTTTTGTTGTGGGTGTTGGTTGCTCCATTTTTTTAAATTATTAGATAGCTCTTATTCTTTCAAACTGGAATCTATTTCTTAGATAGTGTTTGGACTCCTGTTGTGGGGCTGTTTTTTCCCCCCTTGTATATTGCTTCATTATGGTCAATGAAAGTTTGATTTGTCATTAAAGAAAAAAGAAAAAAAACTGATCCAGAAGTTGTCGTATTTGATCTTTGGGGTCTAGCGGTTTGTTTTGTGTACTAGTGCTTCTGAGGGTGCCCGAGACATTGTTGTGCCAAGGAACATTGCTTAGCACACCTTCAAGACTAGAGGATGCTTTGGTGTGTTCATTCTTGTTTCCTTATGAAGCATTGGCATGAGATGAATAATATAATTTTTTGAGTGATCAGCCTGGGTTAAGTTCTATTTGTCTCTTTGGGTTTACGTGACCAAGGAATTGTGTAATTATTATGTCTTCTTTTAGAATTCTACCAACTATCTTTTCATTATTTTCTTTCTGTACTTCTTTGACCCTGTCATGTAATTTATTAACTTGTTTATCTTCTTCCTGCAATTTAAGGCGTAAGTGTAGTCAAGGAAGATTGGGATCAATTTGATGTGGAGGGAGAAGATGCTGAAAAGCCCAGGAAAACTGGTAACTTAAACTGCCTCAACCTTTTTTGCAGCTGTCAGTCAATGTTACTGTTGCTGTGTGTGCCACCTTGGGAATCTTTAGACATAACTGGTAGTTTTATTTGTAGATGAAGTAAAGAAAGAAAGGAAAAATAAAAAGAACCGCAAATCCTCAAACAATTGTGAAAACTCATTAGAAAATGGAAGAGCTACGCAGCCGGAAGCTTATCAGCCCCTGGAGGACAGTGGTGCATTCTTGAAAGGTATTAAAAATAGGGATGGAGTTTAAGTGATATATTTTACTACTAGAATATCTCTTGAACTGATGTACTAACAGAAAAGTTTCTTGTAGGCAAGGCTAAAAAATCTTCCAAAAAGAAAAGAAATGATTCAAGTTCTCTGGATCCCAAGAAGTCGATAGAATCAAGTGATGATGTTAATGAAAATGATGTCTATCAAGTTTCTGTTGGAGATGAAGACACTTCAAAAGGGATGAAAAGTAAGAATTATGGGCATAATGTCATTTTATCTCAATGCTGCTCAATCTTCCCGCTTATTGCCAGAATTGTTTTTTATTATTAGTGCCTCGGTTGTAATAACCCGCCCTTCCCTCTCCTGATGGCTGTGAAATAAACCTTTCAAGTTCTCTTTAACTTTTTCTTAATCATTTGCTGAAGCATTGGCCTGCTTTGCGAGTTTAGAGGGAGATTACTGTATCATTCACATTTTAATAAAATATTCTGTTGGGTCTTTTAAATTTCACATTGAGAACATTTTGGTCTGCAGAATGGATCAAAGAATATTATGAAAGTAGACCGGGATTGAAGGTACTGCAACAACGTATAGATGATTATATAACTGCACATGAGGCACGCCTAGAACAGGTAATGAATGTTTCCTTGAGCAATAACTCAACCTAAACCGTACATCCTTATTTATCATGGCAAGTTCTGCCTCTTAAACTGATTTCATGAATTTTGAGTGTGATTTGGAGCTATACATCCCTTTAGGATGAAGAACACCAAAATACTTTTAAGATGCTGAAGATACTTGAGCATTGATTATGTCATCTAATAACAGTCATGCATCAGATGTGCATATTTAGCCGTGTATTGAGCTGTTTCACTTTGTTGTCACACAGGAAAAGGAAGAAAGGGAGGCTCAAGCAGCTGAAGGGGGATGGACAGTTGTTGTACATCAGAAAGGGAGAAAAAAGACCACGGATGCTGAAAGTGGGGTTACTGTGGGTTCGGTAGCGCAAAATGCTGTAGAGGATAAAATTTCCAAAAAGAAGCGGAAAGAAGTTGGGCTGGATTTCTATCGGTTCCAAAGAAGAGAAGCACAGAGGAATGGTATGGACAGTTATACTCCTAAAATCATAATAGATTTTATTCACACTTTCATATTTCAGCAGTCCTTGGAATTTTTATATTTCATGGTACTGGAGAAAGTAGTCCCAAGCGACTATTGGAATGGAGATTGTGTGTGCAGTGTCATTGCCTAATGTCTCATTCATTTTAACATTTTTTTTTTTTTTTATCTGTTGTGATATGTGTTCGCCATTGTTTTCCTTGAGCTTTCTGTATTCAGTTGGGGCCATATCAATGGTTGGTCTGCATGCAGGCAAATTTTATTGGTTCAAAATTAAATGTTTTCTTCTTGGATTTTGTTTTACTCAAACTCTAGTATTTTCCTTCTAGGAGGGTTATTTCTTTTAGGAATGTGCTAATACATAGCTGCTAACTTGGGGTGCGATAAACACTGGATATTCTATTCTAATTTCATTCGTCAATTTCTCATACAAGTGGATTGTTACAAGTGAAAGAAACAGAAGATTTGACTTCACTTAATATCTTATTTGTTGCAGAGATTCTGATGTTACAAAGTAAATTTGAGCAAGACAAGAAACGGATACAGCAATTGAGAGCTGCTAGAAAATTCCGCCCTTATTGAAGTTTTTGACCTACAACCACAAGGGCATGGCGGCTGGAGACTAGACTTTTTTCTTTTTCTTTTTTCCTTTTTTCCCTTCTTACCTCATATTTGTCAATTCAATTATAAACCATGGCGAATGATTTCAGGTGGCTAGGGTGTGTGGTTGCACGACATGGTTTAAGTGTACGTCTGCCTCTGTTTTGACTTACAATGTTTTTTTTTTTTCTTTTTTTTTTGTAACACTTGACCTTTCTATTTTTTGAAATGTAACATTAGTCTTTGCGTTTCATATTTAATGGACATCTTCCCAAGCAATTTGCATTTAAATCAAGCAGAGTGTAT

mRNA sequence

CTAAACCCTTTCCATCATTCTCTCTCTCACGTGCTCCACCTTCTCCTTCTTCCTCTCGCCGGCTGCTCCTCCCTTTTAGTAGCTCTGTTCTGTCTTCCGACTGTGCCGCCGCAGCCTCCCTCCTAGCGGATTTTCTCTGATTTTCTACTCTCTTCTTGTTACTGCTATTCTCCCAGTCTTCATGTCCGTCTTTTTTCTCGGTTGAACTATTCGGATTAAGACATATAGTGAGATGGATAGACGGACGAAGAAGCGCGACAAAAGGCTTCGCGAGAGTAACACCGAACCTGCCGTTGCAAAGGGCAGTATCGCCACTGAAGTTGACGAAGAAAAGAAGCGGAGAAGGTCATCGAAGAGGAGACTTCAACAAACGTCTTCCGATGAGACCGATCAACTCAATGTTAAGGCAGTAAATGCTTTAGAAGCACGTAACGGCGTAAGTGTAGTCAAGGAAGATTGGGATCAATTTGATGTGGAGGGAGAAGATGCTGAAAAGCCCAGGAAAACTGATGAAGTAAAGAAAGAAAGGAAAAATAAAAAGAACCGCAAATCCTCAAACAATTGTGAAAACTCATTAGAAAATGGAAGAGCTACGCAGCCGGAAGCTTATCAGCCCCTGGAGGACAGTGGTGCATTCTTGAAAGGCAAGGCTAAAAAATCTTCCAAAAAGAAAAGAAATGATTCAAGTTCTCTGGATCCCAAGAAGTCGATAGAATCAAGTGATGATGTTAATGAAAATGATGTCTATCAAGTTTCTGTTGGAGATGAAGACACTTCAAAAGGGATGAAAAAATGGATCAAAGAATATTATGAAAGTAGACCGGGATTGAAGGTACTGCAACAACGTATAGATGATTATATAACTGCACATGAGGCACGCCTAGAACAGGAAAAGGAAGAAAGGGAGGCTCAAGCAGCTGAAGGGGGATGGACAGTTGTTGTACATCAGAAAGGGAGAAAAAAGACCACGGATGCTGAAAGTGGGGTTACTGTGGGTTCGGTAGCGCAAAATGCTGTAGAGGATAAAATTTCCAAAAAGAAGCGGAAAGAAGTTGGGCTGGATTTCTATCGGTTCCAAAGAAGAGAAGCACAGAGGAATGAGATTCTGATGTTACAAAGTAAATTTGAGCAAGACAAGAAACGGATACAGCAATTGAGAGCTGCTAGAAAATTCCGCCCTTATTGAAGTTTTTGACCTACAACCACAAGGGCATGGCGGCTGGAGACTAGACTTTTTTCTTTTTCTTTTTTCCTTTTTTCCCTTCTTACCTCATATTTGTCAATTCAATTATAAACCATGGCGAATGATTTCAGGTGGCTAGGGTGTGTGGTTGCACGACATGGTTTAAGTGTACGTCTGCCTCTGTTTTGACTTACAATGTTTTTTTTTTTTCTTTTTTTTTTGTAACACTTGACCTTTCTATTTTTTGAAATGTAACATTAGTCTTTGCGTTTCATATTTAATGGACATCTTCCCAAGCAATTTGCATTTAAATCAAGCAGAGTGTAT

Coding sequence (CDS)

ATGGATAGACGGACGAAGAAGCGCGACAAAAGGCTTCGCGAGAGTAACACCGAACCTGCCGTTGCAAAGGGCAGTATCGCCACTGAAGTTGACGAAGAAAAGAAGCGGAGAAGGTCATCGAAGAGGAGACTTCAACAAACGTCTTCCGATGAGACCGATCAACTCAATGTTAAGGCAGTAAATGCTTTAGAAGCACGTAACGGCGTAAGTGTAGTCAAGGAAGATTGGGATCAATTTGATGTGGAGGGAGAAGATGCTGAAAAGCCCAGGAAAACTGATGAAGTAAAGAAAGAAAGGAAAAATAAAAAGAACCGCAAATCCTCAAACAATTGTGAAAACTCATTAGAAAATGGAAGAGCTACGCAGCCGGAAGCTTATCAGCCCCTGGAGGACAGTGGTGCATTCTTGAAAGGCAAGGCTAAAAAATCTTCCAAAAAGAAAAGAAATGATTCAAGTTCTCTGGATCCCAAGAAGTCGATAGAATCAAGTGATGATGTTAATGAAAATGATGTCTATCAAGTTTCTGTTGGAGATGAAGACACTTCAAAAGGGATGAAAAAATGGATCAAAGAATATTATGAAAGTAGACCGGGATTGAAGGTACTGCAACAACGTATAGATGATTATATAACTGCACATGAGGCACGCCTAGAACAGGAAAAGGAAGAAAGGGAGGCTCAAGCAGCTGAAGGGGGATGGACAGTTGTTGTACATCAGAAAGGGAGAAAAAAGACCACGGATGCTGAAAGTGGGGTTACTGTGGGTTCGGTAGCGCAAAATGCTGTAGAGGATAAAATTTCCAAAAAGAAGCGGAAAGAAGTTGGGCTGGATTTCTATCGGTTCCAAAGAAGAGAAGCACAGAGGAATGAGATTCTGATGTTACAAAGTAAATTTGAGCAAGACAAGAAACGGATACAGCAATTGAGAGCTGCTAGAAAATTCCGCCCTTATTGA

Homology

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BLAST of CmoCh04G000220 vs. Swiss-Prot
Match: RRP7A_HUMAN (Ribosomal RNA-processing protein 7 homolog A OS=Homo sapiens GN=RRP7A PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 2.6e-12
Identity = 50/147 (34.01%), Postives = 83/147 (56.46%), Query Frame = 1


Query: 174 VSVGDEDTSKGMKKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEK---EEREAQAAE 233
           VS        G+ KWI +Y +S P  + L+  +D ++ A++ ++ +E+   +E E    E
Sbjct: 141 VSTESHPVKSGIHKWISDYADSVPDPEALRVEVDTFMEAYDQKIAEEEAKAKEEEGVPDE 200

Query: 234 GGWTVVVHQKGRKKTTDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNE 293
            GW V V ++GR+         ++       +E +  K+ RKE+ L+FY +Q RE++   
Sbjct: 201 EGW-VKVTRRGRRPVLPRTEAASL-----RVLERERRKRSRKEL-LNFYAWQHRESKMEH 260

Query: 294 ILMLQSKFEQDKKRIQQLRAARKFRPY 318
           +  L+ KFE+DK+RI+ LRA RKFRPY
Sbjct: 261 LAQLRKKFEEDKQRIELLRAQRKFRPY 280

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BLAST of CmoCh04G000220 vs. Swiss-Prot
Match: RRP7A_PONAB (Ribosomal RNA-processing protein 7 homolog A OS=Pongo abelii GN=RRP7A PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.5e-12
Identity = 50/147 (34.01%), Postives = 83/147 (56.46%), Query Frame = 1


Query: 174 VSVGDEDTSKGMKKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEK---EEREAQAAE 233
           VS        G+ KWI +Y +S P  + L+  +D ++ A++ ++ +E+   +E E    E
Sbjct: 141 VSTESHPVKTGIHKWISDYADSVPDPEALRVEVDTFMEAYDQKIAEEEAKAKEEEGVPDE 200

Query: 234 GGWTVVVHQKGRKKTTDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNE 293
            GW V V ++GR+         ++       +E +  K+ RKE+ L+FY +Q RE++   
Sbjct: 201 EGW-VKVTRRGRRPVLPRTEAASL-----RVLERERRKRTRKEL-LNFYAWQHRESKMEH 260

Query: 294 ILMLQSKFEQDKKRIQQLRAARKFRPY 318
           +  L+ KFE+DK+RI+ LRA RKFRPY
Sbjct: 261 LAQLRKKFEEDKQRIELLRAQRKFRPY 280

[Close]

BLAST of CmoCh04G000220 vs. Swiss-Prot
Match: RRP7A_MOUSE (Ribosomal RNA-processing protein 7 homolog A OS=Mus musculus GN=Rrp7a PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-10
Identity = 48/147 (32.65%), Postives = 81/147 (55.10%), Query Frame = 1


Query: 174 VSVGDEDTSKGMKKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEK---EEREAQAAE 233
           VS        G+ KWI +Y +S    + L+  +D ++ A++ ++ +E+   +E E    E
Sbjct: 141 VSTESHLVKSGIHKWISDYEDSVLDPEALRMEVDAFMEAYDKKIAEEEAKAKEEEGVPDE 200

Query: 234 GGWTVVVHQKGRKKTTDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNE 293
            GW V V ++GR+         ++       +E +  K+ RKE+ L+FY +Q RE +   
Sbjct: 201 EGW-VKVTRRGRRPVLPRTEAASL-----RVLEKEKRKRARKEL-LNFYAWQHRETKMEH 260

Query: 294 ILMLQSKFEQDKKRIQQLRAARKFRPY 318
           +  L+ KFE+DK+RI+ +RA RKFRPY
Sbjct: 261 LAQLRKKFEEDKQRIELMRAQRKFRPY 280

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BLAST of CmoCh04G000220 vs. Swiss-Prot
Match: RRP7_SCHPO (Ribosomal RNA-processing protein 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rrp7 PE=3 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 7.4e-07
Identity = 46/137 (33.58%), Postives = 70/137 (51.09%), Query Frame = 1


Query: 184 GMKKWIKEYYESRPGLKVLQQRIDDY---ITAHEARLEQEKEEREAQAAEGGWTVVVHQK 243
           G+K++++ Y       +VL + +D Y   +T  E   ++     + Q  E G+  VV   
Sbjct: 114 GLKRYVESYDRQFVNPRVLAESVDSYMKRVTKKEIAEKRRLFAMKNQPDEDGFVTVVR-- 173

Query: 244 GRKKTTDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQ 303
                    SG       Q+A E ++ KKK   +  DFYRFQ RE ++  +L L  KFE 
Sbjct: 174 ---------SGRAPVGRPQDA-ERQLEKKKDTGIHKDFYRFQLREKKKKALLDLAHKFEF 233

Query: 304 DKKRIQQLRAARKFRPY 318
           DK+RIQQL+  R+F+PY
Sbjct: 234 DKQRIQQLKEKRQFKPY 238

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BLAST of CmoCh04G000220 vs. TrEMBL
Match: A0A0A0KSY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G290150 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.1e-78
Identity = 162/196 (82.65%), Postives = 181/196 (92.35%), Query Frame = 1


Query: 122 QPEAYQPLEDSGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDT 181
           Q EA QP E+ GAFLKGKAKKSSKKKR DSSSLD K S E  +D++ENDVYQ+S GD+D+
Sbjct: 2   QLEACQPFEN-GAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISSGDDDS 61

Query: 182 SKGMKKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKG 241
           SKGMK+WI EY++SRPGL VLQQRIDDYITAHEA+LEQEK+EREAQAAEGGWTVVVHQKG
Sbjct: 62  SKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKG 121

Query: 242 RKKTTDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQD 301
           RKKTTDAESGVTVGSVAQN++ DK+SKKK+ EVGLDFYRFQRREAQRNE++MLQSKFEQD
Sbjct: 122 RKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQSKFEQD 181

Query: 302 KKRIQQLRAARKFRPY 318
           +KRIQQLRAARKFRPY
Sbjct: 182 RKRIQQLRAARKFRPY 196

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BLAST of CmoCh04G000220 vs. TrEMBL
Match: A0A067EUP7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041939mg PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.9e-65
Identity = 161/307 (52.44%), Postives = 211/307 (68.73%), Query Frame = 1


Query: 27  ATEVDEEKKRRRSSKRRLQQTSSDETDQLNVKAVNALEARNGVSVVK-EDWDQFDVEGED 86
           + E  + KK+    KR+  Q S  + + + VK  N     +G   +K E  + FDV    
Sbjct: 3   SAEKKQRKKKPNLKKRKNSQLSETDENLITVKEDNEQNKPSGKKKIKREKGNSFDVRDVQ 62

Query: 87  AEKPRKTDEVKKERKNKKNRKSS--------------NNCENSLENGRATQPEAYQPLED 146
               +   E K+ +  KK R+                ++ +NS EN  A   +  + +E+
Sbjct: 63  DNSNKAAKEKKRNKSKKKLRREEKSNATPIDEVGEHGDDADNSNENLVAGASQVKKEIEN 122

Query: 147 SGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSD-DVNENDVYQVSVGDEDTSKGMKKWIK 206
            G  + GK+KK+ KKK+ D  SL   + +E +  D +E+DVY +S GDE  SKGMKKW+ 
Sbjct: 123 PGRPV-GKSKKARKKKKKDRGSLMKDEELEENTRDADEDDVYMISSGDEHCSKGMKKWVT 182

Query: 207 EYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTTDAES 266
           EY++SRPGLKVLQQRID++ITAHEA+LEQE++EREA+AAEGGWTVVVH KGRKKTTDAES
Sbjct: 183 EYHQSRPGLKVLQQRIDEFITAHEAKLEQERKEREARAAEGGWTVVVHHKGRKKTTDAES 242

Query: 267 GVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQQLRA 318
           G+ VGSVAQ AVEDK++KKK+K+VGLDFYRFQRREA+RNEI++LQSKFEQD+KRIQQLRA
Sbjct: 243 GIAVGSVAQAAVEDKMAKKKKKDVGLDFYRFQRREAKRNEIMLLQSKFEQDRKRIQQLRA 302

[Close]

BLAST of CmoCh04G000220 vs. TrEMBL
Match: V4STN5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012260mg PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.4e-65
Identity = 161/311 (51.77%), Postives = 211/311 (67.85%), Query Frame = 1


Query: 27  ATEVDEEKKRRRSSKRRLQQTSSDETDQLNVKAVNALEARNGVSVVK-EDWDQFDVEGED 86
           + E  + KK+    KR+  Q S  + + + VK  N     +G   +K E  + FDV    
Sbjct: 3   SAEKKQRKKKPNFKKRKNSQLSETDENLITVKEDNEQNKPSGKKKIKREKGNSFDVSDVQ 62

Query: 87  AEKPRKTDEVKKERKNKKNRKSS------------------NNCENSLENGRATQPEAYQ 146
               +   E K+ +  KK R+                    ++ +NS EN  A   +  +
Sbjct: 63  DNSNKAAKEKKRNKSKKKLRREEKSNATPIDEVGEHGAEDGDDADNSNENLVAGASQVKK 122

Query: 147 PLEDSGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSD-DVNENDVYQVSVGDEDTSKGMK 206
            +E+ G  + GK+KK+ KKK+ D  SL   + +E +  D +E+DVY +S GDED SKGMK
Sbjct: 123 EIENPGRPV-GKSKKARKKKKKDRGSLMKDEELEENTRDADEDDVYMISSGDEDCSKGMK 182

Query: 207 KWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTT 266
           KW+ EY++SRPGLKV QQRID++ITAHEA+LEQE++EREA+AAEGGWTVVVH KGRKKTT
Sbjct: 183 KWVTEYHQSRPGLKVFQQRIDEFITAHEAKLEQERKEREARAAEGGWTVVVHHKGRKKTT 242

Query: 267 DAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQ 318
           DAESG+ VGSVAQ AVEDK++KKK+K+VGLDFYRFQRREA+RNEI++LQSKFEQD+KRIQ
Sbjct: 243 DAESGIAVGSVAQAAVEDKMAKKKKKDVGLDFYRFQRREAKRNEIMLLQSKFEQDRKRIQ 302

[Close]

BLAST of CmoCh04G000220 vs. TrEMBL
Match: W9S2Z9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009674 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.6e-59
Identity = 164/323 (50.77%), Postives = 206/323 (63.78%), Query Frame = 1


Query: 2   DRRTKKRDKRLRESNTEPAVAKG-SIATE---VDEEKKRRRSSKRRLQQTSSDETDQLNV 61
           D+  +K+ KR +E +    +  G  I T+   +   KK++ +   R ++  + E D   V
Sbjct: 37  DQLVEKKRKRKKELSV--GIVHGVQIPTQDNAIRTGKKKKGAKSPRNKRVKNVENDNSLV 96

Query: 62  KAVNALEARNGVSVVKEDWDQFDVEGEDAEKPRKTDEVKKERKNKKNRKSSNNCENSLEN 121
              N  E   G             +G DAE  R     KK R+ +K + S    E   E 
Sbjct: 97  SKSNQAENETG-------------DGFDAENGRS----KKARRKEKEQNSLMELEKLPER 156

Query: 122 GRATQPEAYQPLEDSGAFL---KGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQV 181
           G A Q E +         L   KGK+K+  KKK+ D +S    KS E+    +E+DVY V
Sbjct: 157 GDADQTEVFHVSTADADPLTRKKGKSKEVKKKKKKDRNSSKVVKSQETEGGADEDDVYVV 216

Query: 182 SVGDEDTSKGMKKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWT 241
           S GDED SKGMKKWI E ++SRPGL +LQQRID++ITAHE +LEQE++EREA+AAEGGWT
Sbjct: 217 SSGDEDCSKGMKKWITESHQSRPGLTILQQRIDEFITAHEEKLEQERKEREARAAEGGWT 276

Query: 242 VVVHQKGRKKTTDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILML 301
           VV H KGRKKTTDAE+G+TVGSVAQ   E  ++KKK KEVGLDFYRFQR+EAQRNE++ML
Sbjct: 277 VVTHHKGRKKTTDAETGMTVGSVAQAVAEGNLAKKKSKEVGLDFYRFQRKEAQRNELMML 336

Query: 302 QSKFEQDKKRIQQLRAARKFRPY 318
           QSKFEQDKKRIQQLRAARKFRPY
Sbjct: 337 QSKFEQDKKRIQQLRAARKFRPY 340

[Close]

BLAST of CmoCh04G000220 vs. TrEMBL
Match: A0A059ASH3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02096 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.8e-59
Identity = 124/188 (65.96%), Postives = 156/188 (82.98%), Query Frame = 1


Query: 131 DSGAFLKGKAKKSSKKKRND-SSSLDPKKSIESSDDVNENDVYQVSVGDEDTSKGMKKWI 190
           D+    K K+KK+ +KK     S  D  + ++ + + + +DV+Q+S GDED SKGMKKW+
Sbjct: 65  DTSEVRKSKSKKARRKKGKPLQSPRDIDQVVDKNSEPDLDDVHQISSGDEDESKGMKKWL 124

Query: 191 KEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTTDAE 250
            EYY+ RPG+++LQQRIDD+IT HE +LEQE++EREA+ AEGGWTVV H KGRKKTTD+E
Sbjct: 125 AEYYQKRPGIEILQQRIDDFITTHETKLEQERKEREARVAEGGWTVVTHHKGRKKTTDSE 184

Query: 251 SGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQQLR 310
           SG+ VGSV+Q A+EDK++KKKRKEVG DFYRFQRREAQRNEI+ML+SKFEQD+KRIQQLR
Sbjct: 185 SGIVVGSVSQAALEDKLAKKKRKEVGSDFYRFQRREAQRNEIMMLRSKFEQDRKRIQQLR 244

Query: 311 AARKFRPY 318
           AARKFRPY
Sbjct: 245 AARKFRPY 252

[Close]

BLAST of CmoCh04G000220 vs. TAIR10
Match: AT5G38720.1 (AT5G38720.1 unknown protein)

HSP 1 Score: 201.4 bits (511), Expect = 8.0e-52
Identity = 142/316 (44.94%), Postives = 203/316 (64.24%), Query Frame = 1


Query: 7   KRDKRLRESNTEPAVAKGSIATEVDEEKKRRRSSKRRLQQTSSDETDQLNVKAVNALEAR 66
           +R K  + SN E  +++   A ++ + K   + +++++Q+    ++   + K    ++ R
Sbjct: 23  QRKKNEKVSNVE--LSEDPQAAQL-QAKSSEKPNRKKIQKGKEIKSSPADGKLSGKMKKR 82

Query: 67  NGVSVVKEDWDQFDVEGEDAEKPRKTDEVKKER----KNKKNRKSSNNCENSLENGRATQ 126
                 KE     D+  E   +   T++VK+++    K KK RK+     +S+E+ +   
Sbjct: 83  ------KEKVGNVDIS-EPILEAISTEKVKEKKGKMNKTKKKRKAEEITRSSVEDLKR-- 142

Query: 127 PEAYQPLEDSGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDTS 186
                         + K KKS+KKK+ D +S    K  E      E DVYQ+S GDED +
Sbjct: 143 --------------ESKFKKSNKKKKMDMTSKKENKIEE------EEDVYQISSGDEDCT 202

Query: 187 KGMKKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGR 246
           +GMKKW+ +YYE RPGL  LQ+RIDD++TAHE RLEQEK+++EA+AAEGGWTVVVH KGR
Sbjct: 203 RGMKKWVSDYYEGRPGLDELQKRIDDFMTAHEERLEQEKQDKEAKAAEGGWTVVVHHKGR 262

Query: 247 KKTTDAESGVTVGSVAQNAVEDKISKKKRKE-VGLDFYRFQRREAQRNEILMLQSKFEQD 306
           KKTT++E+G  VGS +Q A+EDKI+KKK+ E V   FYRFQRR+AQRNE+L LQSKFE+D
Sbjct: 263 KKTTESETGTAVGSFSQAALEDKIAKKKQSEPVAHGFYRFQRRDAQRNELLALQSKFEED 306

Query: 307 KKRIQQLRAARKFRPY 318
           KKRIQQLRAAR+F+P+
Sbjct: 323 KKRIQQLRAARRFKPF 306

[Close]

BLAST of CmoCh04G000220 vs. NCBI nr
Match: gi|778701950|ref|XP_004140427.2| (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X1 [Cucumis sativus])

HSP 1 Score: 372.9 bits (956), Expect = 5.7e-100
Identity = 202/250 (80.80%), Postives = 230/250 (92.00%), Query Frame = 1


Query: 68  GVSVVKEDWDQFDVEGEDAEKPRKTDEVKKERKNKKNRKSSNNCENSLENGRATQPEAYQ 127
           G++VV  D DQF VEGEDAEKP+K+D++KK+RKNKKNRKSSN+C+NSLENGRA Q EA Q
Sbjct: 20  GLTVVNADSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCDNSLENGRAMQLEACQ 79

Query: 128 PLEDSGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDTSKGMKK 187
           P E+ GAFLKGKAKKSSKKKR DSSSLD K S E  +D++ENDVYQ+S GD+D+SKGMK+
Sbjct: 80  PFEN-GAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISSGDDDSSKGMKR 139

Query: 188 WIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTTD 247
           WI EY++SRPGL VLQQRIDDYITAHEA+LEQEK+EREAQAAEGGWTVVVHQKGRKKTTD
Sbjct: 140 WITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKGRKKTTD 199

Query: 248 AESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQQ 307
           AESGVTVGSVAQN++ DK+SKKK+ EVGLDFYRFQRREAQRNE++MLQSKFEQD+KRIQQ
Sbjct: 200 AESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQSKFEQDRKRIQQ 259

Query: 308 LRAARKFRPY 318
           LRAARKFRPY
Sbjct: 260 LRAARKFRPY 268

[Close]

BLAST of CmoCh04G000220 vs. NCBI nr
Match: gi|778701957|ref|XP_004140428.2| (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X3 [Cucumis sativus])

HSP 1 Score: 368.6 bits (945), Expect = 1.1e-98
Identity = 202/255 (79.22%), Postives = 229/255 (89.80%), Query Frame = 1


Query: 63  LEARNGVSVVKEDWDQFDVEGEDAEKPRKTDEVKKERKNKKNRKSSNNCENSLENGRATQ 122
           L   N    V +D DQF VEGEDAEKP+K+D++KK+RKNKKNRKSSN+C+NSLENGRA Q
Sbjct: 8   LRESNIEPAVVKDSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCDNSLENGRAMQ 67

Query: 123 PEAYQPLEDSGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDTS 182
            EA QP E+ GAFLKGKAKKSSKKKR DSSSLD K S E  +D++ENDVYQ+S GD+D+S
Sbjct: 68  LEACQPFEN-GAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISSGDDDSS 127

Query: 183 KGMKKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGR 242
           KGMK+WI EY++SRPGL VLQQRIDDYITAHEA+LEQEK+EREAQAAEGGWTVVVHQKGR
Sbjct: 128 KGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKGR 187

Query: 243 KKTTDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDK 302
           KKTTDAESGVTVGSVAQN++ DK+SKKK+ EVGLDFYRFQRREAQRNE++MLQSKFEQD+
Sbjct: 188 KKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQSKFEQDR 247

Query: 303 KRIQQLRAARKFRPY 318
           KRIQQLRAARKFRPY
Sbjct: 248 KRIQQLRAARKFRPY 261

[Close]

BLAST of CmoCh04G000220 vs. NCBI nr
Match: gi|778701953|ref|XP_011655116.1| (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X2 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 1.4e-98
Identity = 200/246 (81.30%), Postives = 226/246 (91.87%), Query Frame = 1


Query: 72  VKEDWDQFDVEGEDAEKPRKTDEVKKERKNKKNRKSSNNCENSLENGRATQPEAYQPLED 131
           V  D DQF VEGEDAEKP+K+D++KK+RKNKKNRKSSN+C+NSLENGRA Q EA QP E+
Sbjct: 20  VNADSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCDNSLENGRAMQLEACQPFEN 79

Query: 132 SGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDTSKGMKKWIKE 191
            GAFLKGKAKKSSKKKR DSSSLD K S E  +D++ENDVYQ+S GD+D+SKGMK+WI E
Sbjct: 80  -GAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISSGDDDSSKGMKRWITE 139

Query: 192 YYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTTDAESG 251
           Y++SRPGL VLQQRIDDYITAHEA+LEQEK+EREAQAAEGGWTVVVHQKGRKKTTDAESG
Sbjct: 140 YHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKGRKKTTDAESG 199

Query: 252 VTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQQLRAA 311
           VTVGSVAQN++ DK+SKKK+ EVGLDFYRFQRREAQRNE++MLQSKFEQD+KRIQQLRAA
Sbjct: 200 VTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQSKFEQDRKRIQQLRAA 259

Query: 312 RKFRPY 318
           RKFRPY
Sbjct: 260 RKFRPY 264

[Close]

BLAST of CmoCh04G000220 vs. NCBI nr
Match: gi|659113953|ref|XP_008456839.1| (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X1 [Cucumis melo])

HSP 1 Score: 367.9 bits (943), Expect = 1.8e-98
Identity = 200/250 (80.00%), Postives = 229/250 (91.60%), Query Frame = 1


Query: 68  GVSVVKEDWDQFDVEGEDAEKPRKTDEVKKERKNKKNRKSSNNCENSLENGRATQPEAYQ 127
           G+ VV  D DQF+VEGEDAEKP+K+D++KK+RKNK NR+SSN+C+N LENGRA Q EA Q
Sbjct: 20  GLIVVHADSDQFNVEGEDAEKPKKSDKLKKDRKNKNNRQSSNDCDNLLENGRAMQLEACQ 79

Query: 128 PLEDSGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDTSKGMKK 187
           PLE+ GAFLKGKAKKSSKKKR DSSSLD K S E  +D++ENDVYQ+S GD+D+SKGMK+
Sbjct: 80  PLEN-GAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISSGDDDSSKGMKR 139

Query: 188 WIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTTD 247
           WI EY++SRPGL +LQQRIDDYITAHEA+LEQEK+EREAQAAEGGWTVVVHQKGRKKTTD
Sbjct: 140 WITEYHKSRPGLNLLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKGRKKTTD 199

Query: 248 AESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQQ 307
           AESGVTVGSVAQN++ DKISKKK+ EVGLDFYRFQRREAQRNE++MLQSKFEQD+KRIQQ
Sbjct: 200 AESGVTVGSVAQNSLGDKISKKKKNEVGLDFYRFQRREAQRNEVMMLQSKFEQDRKRIQQ 259

Query: 308 LRAARKFRPY 318
           LRAARKFRPY
Sbjct: 260 LRAARKFRPY 268

[Close]

BLAST of CmoCh04G000220 vs. NCBI nr
Match: gi|659113955|ref|XP_008456840.1| (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X2 [Cucumis melo])

HSP 1 Score: 365.5 bits (937), Expect = 9.1e-98
Identity = 199/249 (79.92%), Postives = 228/249 (91.57%), Query Frame = 1


Query: 69  VSVVKEDWDQFDVEGEDAEKPRKTDEVKKERKNKKNRKSSNNCENSLENGRATQPEAYQP 128
           V+ V  D DQF+VEGEDAEKP+K+D++KK+RKNK NR+SSN+C+N LENGRA Q EA QP
Sbjct: 17  VAKVHADSDQFNVEGEDAEKPKKSDKLKKDRKNKNNRQSSNDCDNLLENGRAMQLEACQP 76

Query: 129 LEDSGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDTSKGMKKW 188
           LE+ GAFLKGKAKKSSKKKR DSSSLD K S E  +D++ENDVYQ+S GD+D+SKGMK+W
Sbjct: 77  LEN-GAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISSGDDDSSKGMKRW 136

Query: 189 IKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTTDA 248
           I EY++SRPGL +LQQRIDDYITAHEA+LEQEK+EREAQAAEGGWTVVVHQKGRKKTTDA
Sbjct: 137 ITEYHKSRPGLNLLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKGRKKTTDA 196

Query: 249 ESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQQL 308
           ESGVTVGSVAQN++ DKISKKK+ EVGLDFYRFQRREAQRNE++MLQSKFEQD+KRIQQL
Sbjct: 197 ESGVTVGSVAQNSLGDKISKKKKNEVGLDFYRFQRREAQRNEVMMLQSKFEQDRKRIQQL 256

Query: 309 RAARKFRPY 318
           RAARKFRPY
Sbjct: 257 RAARKFRPY 264

The following BLAST results are available for this feature:

BLAST of CmoCh04G000220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RRP7A_HUMAN	2.6e-12	34.01	Ribosomal RNA-processing protein 7 homolog A OS=Homo sapiens GN=RRP7A PE=1 SV=2	[more]
RRP7A_PONAB	4.5e-12	34.01	Ribosomal RNA-processing protein 7 homolog A OS=Pongo abelii GN=RRP7A PE=2 SV=1	[more]
RRP7A_MOUSE	1.4e-10	32.65	Ribosomal RNA-processing protein 7 homolog A OS=Mus musculus GN=Rrp7a PE=2 SV=1	[more]
RRP7_SCHPO	7.4e-07	33.58	Ribosomal RNA-processing protein 7 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]

BLAST of CmoCh04G000220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSY1_CUCSA	1.1e-78	82.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G290150 PE=4 SV=1	[more]
A0A067EUP7_CITSI	1.9e-65	52.44	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041939mg PE=4 SV=1	[more]
V4STN5_9ROSI	2.4e-65	51.77	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012260mg PE=4 SV=1	[more]
W9S2Z9_9ROSA	2.6e-59	50.77	Uncharacterized protein OS=Morus notabilis GN=L484_009674 PE=4 SV=1	[more]
A0A059ASH3_EUCGR	5.8e-59	65.96	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02096 PE=4 SV=1	[more]

BLAST of CmoCh04G000220 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G38720.1	8.0e-52	44.94	unknown protein	[more]

BLAST of CmoCh04G000220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778701950\|ref\|XP_004140427.2\|	5.7e-100	80.80	PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X1 [Cucumis sati...	[more]
gi\|778701957\|ref\|XP_004140428.2\|	1.1e-98	79.22	PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X3 [Cucumis sati...	[more]
gi\|778701953\|ref\|XP_011655116.1\|	1.4e-98	81.30	PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X2 [Cucumis sati...	[more]
gi\|659113953\|ref\|XP_008456839.1\|	1.8e-98	80.00	PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X1 [Cucumis melo...	[more]
gi\|659113955\|ref\|XP_008456840.1\|	9.1e-98	79.92	PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X2 [Cucumis melo...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR024326	RRP7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G000220.1	CmoCh04G000220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024326	Ribosomal RNA-processing protein 7	PANTHER	PTHR13191	RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATED	coord: 158..317 score: 1.4
IPR024326	Ribosomal RNA-processing protein 7	PFAM	PF12923	RRP7	coord: 184..317 score: 1.5
None	No IPR available	unknown	Coil	Coil	coord: 210..230 scor
None	No IPR available	PANTHER	PTHR13191:SF0	RIBOSOMAL RNA-PROCESSING PROTEIN 7 HOMOLOG A-RELATED	coord: 158..317 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G000220	CmaCh04G000210	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G000220	Cla016887	Watermelon (97103) v1	cmowmB736
CmoCh04G000220	Csa5G290150	Cucumber (Chinese Long) v2	cmocuB756
CmoCh04G000220	Cp4.1LG01g06530	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G000220	Bhi07G000128	Wax gourd	cmowgoB0898
CmoCh04G000220	CsGy5G009920	Cucumber (Gy14) v2	cgybcmoB641
CmoCh04G000220	Carg21977	Silver-seed gourd	carcmoB0250

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G000220	Cucurbita moschata (Rifu)	cmocmoB464
CmoCh04G000220	Cucurbita maxima (Rimu)	cmacmoB731
CmoCh04G000220	Wild cucumber (PI 183967)	cmocpiB760
CmoCh04G000220	Wild cucumber (PI 183967)	cmocpiB743
CmoCh04G000220	Melon (DHL92) v3.5.1	cmomeB657
CmoCh04G000220	Watermelon (Charleston Gray)	cmowcgB627
CmoCh04G000220	Cucurbita pepo (Zucchini)	cmocpeB674
CmoCh04G000220	Bottle gourd (USVL1VR-Ls)	cmolsiB622
CmoCh04G000220	Melon (DHL92) v3.6.1	cmomedB731
CmoCh04G000220	Silver-seed gourd	carcmoB0924
CmoCh04G000220	Cucumber (Chinese Long) v3	cmocucB0862
CmoCh04G000220	Watermelon (97103) v2	cmowmbB703