CmaCh04G000210 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGAATTTGGCAACCCTAGACCCTTTCCATCGTTCTCTCTCACGTGCTCCACCTTCTCCTCCTTCCTCTCGCCGGCTGCTCCTCCCTTTTAGTAGCTCTGTTCTGTCTTCCGACAGTGCCGCCGCCGCCTCCCTCCTAGCGGATTTTCTCTGATTTTCTACTCTCTTCTTGTTACTGCTATTCTCCCAGTCTTCATGTGCGTCTTTTTTCTCGATTGAACTATTCGGATTAAGACATATGTCTGCATTTTTATTTATGACGTATGTCTGTCAATTGGGCTTTCATCATCTGTGTATCTTTTGCTAATAATTAACTTATTCTTTGCTTGTGTTTCGGGAGCACAGAGTGAGATGGATAGACGGACGAAGAAGCGCGACAAAAGGCTTCGCGAGAGTAACACCGAACCTGCCGTTGCAAAGGGTTTGTTTTTTACTTGCTACCTTGTATACTATATGCTTACTTTCTCATCACTTCTTCAGTTATCTTCGAACGGACTAGAACAAGGGTTGAAGAATATCTGCTTCTGGACTCCATTAATATCTTGAACTCCTAATTGTGTCTTCCTTCCTTCGGCACAGCATGTTTTTGTTTATTGGTTTTTAGTGCTTACCCCTATGGGTGATGGGGTTACCTATTTAATCCTCATGCTCTGTTTTCATCCATGTCCACTTTCGTTCACTCCTTTATTTTCTAGAATCGAAGGGGTTTAATATTATTGGTCATCTCGTATCGTTACTGAATTTCATTTCTTTTGTTTTTTCAGGCAGTATCGCCACTGAAGTTGACGAAGAAAAGAAGCGGAAAAGGTCATCGAAGAGGAGACTTCAACAAACGTCTTCTGATGAGACCGATCAACTCAATGTTAAGGCAGTAAATGCTTTAGAAGCACGTAACGGTATGTCAACTTCCTATGTTCAGTACCGCAACCCTTTAGGTCCTTGTGAAAATAAATTGTTTTGTTATTAATTGGGACATTCTGTCTACGTCCTCTGATAGCATGAGTTAACTTTCTTTTTTATGGTTGCTATGAAGCTTTTGCTTTCTTTGGTCTCATCTTAAATAAGGGTGGTTTGAGGCTTGTTGATTTGGATATGCATGGGGTATTGCTAGTTGAGTTGGTTAAGCCATTGTTTTCTTGTTTAATATCTCGATAATTAGGCGAGTTTGGTGAGGGATTTCAATTTTCCTAGGGTTCTTGTGGTGAAAATGAGTGAGGGTGGCTTTTCCAGGTTTGTGAGGGAGTTTAATACGCTTATCAAGGAATTAGGATTTGAACTCTTGGACCTTCCTCTTGTTAATAGTAGATTTATGTGGCCCGACTTAATGACTTGGAGTTACTTTTCTTTTAATCATTGGCCTATCTTTTGGGGTATAGGTCATACGTTTATCAAGGAATTAGGATTTGAACTCTTGGACCTTCCTCTTGTTAATAGTAGATTTATGTGAACCGACTTAATGACTTGGAGTTACTTTTCTTTTGATCATTGGCCTATCTTTTGGGGTATAGGTCCTATTTCGTGTGGTCCTGCCCTTCTAGATTTGGAAATATATTGCTCTCTCATCCCTCTTTAACATGCTCATTCCTTTTCTAGTGGTGACTTTTAAGGAGTCATTGATTATTTGGGGCTATCAGTTTTCTTATTCTCTTTGGAGTCGTTGCCTTGTGCTTGGGGTGGTGTGGGTGCATAACAAGGATTGTCTAACCATGATTAAGGAGATCTTGATGGACTCACCCTTTTGTGAAAAGGGAAGAGTGTTGTGGCAATGTTCCTTCTCTATTTTATGGGAGGTGCGGCTTGAGAGGATTTACATTATGTTTAGAGGGGCTGAGAGATATTTGGAAGAGCTGTAGGAGGTGTTGAGGTTTAATAGCTCTTTATGGGCATCCATGAATTTTATTTTTTGTTGTAATTATCAGATAGGTTTTATTCTTTTGGATCAAAGTTCTTATAGATAGTCGAGGACTCCTTTTGTGGCTTTGTTTTGTATGTCTTTGTACATTGTTTACTTTTTTCAATAAAAGCTTGGTTTCATGTCAACAAAAAAATCTCTCCTTTCCTAGTGGGGGTGTGTCGAAGATGATGGTGGGAGGGTTTTCAATTATGTGAAAGTTGTTCTCGGTAAAGTTGGTTTTAAGAGTCTGGAACAGGAATAGTGATGTGTTTGAGGGTTGTAAGTTAAAAAAAAACAAGAGCTGTTAGTTAGTGGGAGTCAAGGTAAATCAATAGGTGTTTCACATAGAGTGGGGAATAAATCATTTAAGGGGGAAATATTGTCTTCTGTACTTTTCTTGTACACTATGCCCCTTTGTGGAAGACTGAAAGCCTTAAAATGGTGCCAATTTTAGATAAGGATAGGGGAAGTCTAGGGGCCCTTTTTCATACTGGAAGAGATTAGGAAGATGGTTGTGGTTCTGAGTGACTTGGTGAAGGTAGAGTTGGATGATGTGTTTCAGCGAGTTAGATGAGAGAGGTATCTTGTACTATAATAATCCGAGGTTTCATTGTGAAATATAATTTGTACAAGAGCATAAAAAACAAACAAACAGCATCTAACAAACTACAGAGAGCAATCCCAATCCAAAAGAATAACACCTAAATAATAGAATGCAAATAGGTTGATAAAGGACAGTATGACTAATATATTTGAAGTATTACAGCTCTACTAATATTAGCATAGTCTCAGGGATATTGTTAGATGTGATGTCTTTTTGTTGTGGGTGTTGGTTGCTCCATTTTTTTAAATTATTAGATAGCTCTTATTCTTTCAAACTGGAATCTGTTTCTTAGATAGTGTTTGGACTCCTGTTGTGGGGCTGTTTTTTTTTTAACCCCCTTGTATATTGGTCAATGAAAGTTTGATTTGTCATTAAAAAAAAAAAAAAAAGAAAAAAAACTGAGCCAGAAGTTGTCGTATTTGATCTTTGGGGTCTAGCGGTGTGTTTTGTGTACTAGTGCTTCTGAGGGTGCCCGAGACATTGTTGTGCCAAGGAACATTGCTTAGCACACCTTCAAGACTAGAGGATGCTTTGGTATGAGATGAATAATATAATCTTTTGAGTGATCAGCCTGGGTTAAATTCTATTTGTCTCTTTGGGTTTACGTGACCAAGGAGTTGTGTAATTATTATGTCTTCTTTTAGAATTCTACCAACGATCTTTTCATTATTTTCTTTCTGTACTTCTTTGTCACTGTCATGTAATTTATTAACTTGTTTATCTTCGTCCTGCAATTTAAGGCATAAGTGTAGTCAAGGAAGATTCGGATCAATTTGATGTGGAGGGAGAAGATGCTGAAAAGCCCAGGAAAACTGGTACTTAAACTGCCTCAACCTTTTTTGCAGCTGTCAGTCAATGTTACTGTTGCTGTGTGTGCTACCTTGGGAGTCTTTAGACATAACTGGTAGTTTTATTTGTAGATGAAGTAAAGAAAGAAAGGAAAAATAAAAAGAACCGCAAATCCTCAAACAATTGTGAAAACTCATTAGAAAATGGAAGAGCTACGCAGCCGGAAGCTTATCAGCCCCTGGAGGACAGTGGTGCATTCTTGAAAGGTATTAAAAATAGGGATGGAGTTTAAGTGATATATTTTACTACTAGAATATCTCTTCAACTGATGTACTAACATAAAAGTTTCTTGTAGCCAAAAAATCTTCCAAAAAGAAAAGAAATGATTCAAGTTCTCTGGATCCCAAGAAGTCGATAGAATCAAGTGATGATGTTAATGAAAATGATGTCTATCAAGTTTCTGTTGGAGATGAAGACACTTCAAAAGGGATGAAAAGTAAGAATTATGGGCATAATGTCATTTTATCTCAATGCTGCTCAATCTTCCCGCTTATTGTCAGAATTGTTTTTTATTATTAGTACCTCGGTTGTAATAACCTGCCCTTCCCTCTCCTGATGGCTGTGAAATAAACGTTCTCTTTGACTTTTTCTTAATCATTTGCTGAAGCATTGGCCTGCTTTGCGAGTTTAGAGGGAGATTACTGTATCATTCACATTTTAATAAAATATTCTGTTGGGTCTTTTAAATTTCACATTGAGAACATTTTGGTCTGCAGAATGGATCAAAGAATATTATGAAAGTAGACCGGGATTGAAGGTATTGCAACAACGTATAGATGATTATATAACTGCACATGAGGCACGCCTAGAACAGGTAATGAATGTTTCCTTGAGCAATGACTCAACCTAAACCGTACATCCTTATTTATCATGGCAAGTTCTACCTCTTAAACTGATTTCATGAATTTTGAGTGTGATTTGGAGCTATATATCCCTTTAGGATGAAGAACACCAAAATACTTTTAAGATGCTGAAGATACTTGAGCATTGATTATGTCATCTAATAACAGTCATGCATCAGATGTGCATATTTAGCCGTGTATTGAGCTGTTTCACTTTGTTGTCACACAGGAAAAGGAAGAAAGGGAGGCTCAAGCAGCTGAAGGGGGATGGACAGTTGTTGTACATCAGAAAGGGAGAAAAAAGACCACGGATGCTGAAAGTGGGGTTACTGTGGGTTCGGTAGCGCAAAATGCTGTAGAGGATAAAATTTCTAAAAAGAAGCGGAAAGAAGTTGGGCTGGATTTCTATCGGTTCCAAAGAAGAGAAGCACAGAGGAATGGTATGGACAGTTATACTCCTAAAATCATAATATATTTTATTCACACTTTCATATTTCAGCAGTCCTTGGGATTTTTTTATTTCGTGGTACTGGAGAAAGTAGTCCCAAGCGACTATTGGAATGGAGATTGTGTGTTTAGTGTCATTGCCTAATGTCTCATTCATTTTAACGTAATTTTTTTTTTATCCGTTGTGCTATGTGTTCGCCATTGTTTTCCTTGAGCTTTCTGTATTCAGTTGGGGCCATATCAATGGTTGGTCTGCATGCATGCAAATTTTATTGGTTCAAAATTAAATGTTTTCTTCTTGGATTTTGTTTTACTCAAACTCTAGTATTTTCCTTCTAGGAGGGTTATTTCTTTTGGGAATGTGCTAATACATAGCTGCTAACTTGGGGTGCGATAAACACCGGATATTCTATTCTAATTTCATTCGTCAATTTCTCATACAAGTGGATCGTTACAAGTGAAAGGAACAGAAGATTTTACTTCACTTAATATCTTATTTGTTGCAGAGATTCTGATGTTACAAAGTAAATTTGAGCAAGACAAGAAACGGATACAGCAATTGAGAGCTGCTAGAAAATTCCGCCCTTATTGAAGTTTTTGACCTACAACCACAAGGGCATGGCGGCTGGAGACTAGATTTTTTTCTTTTTTCCTTTTTCCTTTTTTCCTTTTTTCCTTTTTTCCCTTCTTACCTCATATTTGTCGATTCAATTATAAACCATGGCGAATGATTTCAGGTGGCTAGGGTGTGTGGTTGCACGACATGGTTAAAGTGTACGTCTGCCTCTGTTTTGACTTGCAATGTTTTTAACACTTGGCCTTTCTATTTTTTGAAATGTAACATTAGTCTTTGTGTTTCATATTTAATGGACATCTTCCCAAGCAATCTGCATTTAAATCAAG AGGAATTTGGCAACCCTAGACCCTTTCCATCGTTCTCTCTCACGTGCTCCACCTTCTCCTCCTTCCTCTCGCCGGCTGCTCCTCCCTTTTAGTAGCTCTGTTCTGTCTTCCGACAGTGCCGCCGCCGCCTCCCTCCTAGCGGATTTTCTCTGATTTTCTACTCTCTTCTTGTTACTGCTATTCTCCCAGTCTTCATAGTGAGATGGATAGACGGACGAAGAAGCGCGACAAAAGGCTTCGCGAGAGTAACACCGAACCTGCCGTTGCAAAGGGCAGTATCGCCACTGAAGTTGACGAAGAAAAGAAGCGGAAAAGGTCATCGAAGAGGAGACTTCAACAAACGTCTTCTGATGAGACCGATCAACTCAATGTTAAGGCAGTAAATGCTTTAGAAGCACGTAACGGCATAAGTGTAGTCAAGGAAGATTCGGATCAATTTGATGTGGAGGGAGAAGATGCTGAAAAGCCCAGGAAAACTGATGAAGTAAAGAAAGAAAGGAAAAATAAAAAGAACCGCAAATCCTCAAACAATTGTGAAAACTCATTAGAAAATGGAAGAGCTACGCAGCCGGAAGCTTATCAGCCCCTGGAGGACAGTGGTGCATTCTTGAAAGCCAAAAAATCTTCCAAAAAGAAAAGAAATGATTCAAGTTCTCTGGATCCCAAGAAGTCGATAGAATCAAGTGATGATGTTAATGAAAATGATGTCTATCAAGTTTCTGTTGGAGATGAAGACACTTCAAAAGGGATGAAAAAATGGATCAAAGAATATTATGAAAGTAGACCGGGATTGAAGGTATTGCAACAACGTATAGATGATTATATAACTGCACATGAGGCACGCCTAGAACAGGAAAAGGAAGAAAGGGAGGCTCAAGCAGCTGAAGGGGGATGGACAGTTGTTGTACATCAGAAAGGGAGAAAAAAGACCACGGATGCTGAAAGTGGGGTTACTGTGGGTTCGGTAGCGCAAAATGCTGTAGAGGATAAAATTTCTAAAAAGAAGCGGAAAGAAGTTGGGCTGGATTTCTATCGGTTCCAAAGAAGAGAAGCACAGAGGAATGAGATTCTGATGTTACAAAGTAAATTTGAGCAAGACAAGAAACGGATACAGCAATTGAGAGCTGCTAGAAAATTCCGCCCTTATTGAAGTTTTTGACCTACAACCACAAGGGCATGGCGGCTGGAGACTAGATTTTTTTCTTTTTTCCTTTTTCCTTTTTTCCTTTTTTCCTTTTTTCCCTTCTTACCTCATATTTGTCGATTCAATTATAAACCATGGCGAATGATTTCAGGTGGCTAGGGTGTGTGGTTGCACGACATGGTTAAAGTGTACGTCTGCCTCTGTTTTGACTTGCAATGTTTTTAACACTTGGCCTTTCTATTTTTTGAAATGTAACATTAGTCTTTGTGTTTCATATTTAATGGACATCTTCCCAAGCAATCTGCATTTAAATCAAG ATGGATAGACGGACGAAGAAGCGCGACAAAAGGCTTCGCGAGAGTAACACCGAACCTGCCGTTGCAAAGGGCAGTATCGCCACTGAAGTTGACGAAGAAAAGAAGCGGAAAAGGTCATCGAAGAGGAGACTTCAACAAACGTCTTCTGATGAGACCGATCAACTCAATGTTAAGGCAGTAAATGCTTTAGAAGCACGTAACGGCATAAGTGTAGTCAAGGAAGATTCGGATCAATTTGATGTGGAGGGAGAAGATGCTGAAAAGCCCAGGAAAACTGATGAAGTAAAGAAAGAAAGGAAAAATAAAAAGAACCGCAAATCCTCAAACAATTGTGAAAACTCATTAGAAAATGGAAGAGCTACGCAGCCGGAAGCTTATCAGCCCCTGGAGGACAGTGGTGCATTCTTGAAAGCCAAAAAATCTTCCAAAAAGAAAAGAAATGATTCAAGTTCTCTGGATCCCAAGAAGTCGATAGAATCAAGTGATGATGTTAATGAAAATGATGTCTATCAAGTTTCTGTTGGAGATGAAGACACTTCAAAAGGGATGAAAAAATGGATCAAAGAATATTATGAAAGTAGACCGGGATTGAAGGTATTGCAACAACGTATAGATGATTATATAACTGCACATGAGGCACGCCTAGAACAGGAAAAGGAAGAAAGGGAGGCTCAAGCAGCTGAAGGGGGATGGACAGTTGTTGTACATCAGAAAGGGAGAAAAAAGACCACGGATGCTGAAAGTGGGGTTACTGTGGGTTCGGTAGCGCAAAATGCTGTAGAGGATAAAATTTCTAAAAAGAAGCGGAAAGAAGTTGGGCTGGATTTCTATCGGTTCCAAAGAAGAGAAGCACAGAGGAATGAGATTCTGATGTTACAAAGTAAATTTGAGCAAGACAAGAAACGGATACAGCAATTGAGAGCTGCTAGAAAATTCCGCCCTTATTGA MDRRTKKRDKRLRESNTEPAVAKGSIATEVDEEKKRKRSSKRRLQQTSSDETDQLNVKAVNALEARNGISVVKEDSDQFDVEGEDAEKPRKTDEVKKERKNKKNRKSSNNCENSLENGRATQPEAYQPLEDSGAFLKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDTSKGMKKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKTTDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRIQQLRAARKFRPY
BLAST of CmaCh04G000210 vs. Swiss-Prot
Match: RRP7A_HUMAN (Ribosomal RNA-processing protein 7 homolog A OS=Homo sapiens GN=RRP7A PE=1 SV=2) HSP 1 Score: 74.3 bits (181), Expect = 2.6e-12 Identity = 50/147 (34.01%), Postives = 83/147 (56.46%), Query Frame = 1
BLAST of CmaCh04G000210 vs. Swiss-Prot
Match: RRP7A_PONAB (Ribosomal RNA-processing protein 7 homolog A OS=Pongo abelii GN=RRP7A PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.5e-12 Identity = 50/147 (34.01%), Postives = 83/147 (56.46%), Query Frame = 1
BLAST of CmaCh04G000210 vs. Swiss-Prot
Match: RRP7A_MOUSE (Ribosomal RNA-processing protein 7 homolog A OS=Mus musculus GN=Rrp7a PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.4e-10 Identity = 48/147 (32.65%), Postives = 81/147 (55.10%), Query Frame = 1
BLAST of CmaCh04G000210 vs. Swiss-Prot
Match: RRP7_SCHPO (Ribosomal RNA-processing protein 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rrp7 PE=3 SV=2) HSP 1 Score: 56.2 bits (134), Expect = 7.4e-07 Identity = 46/137 (33.58%), Postives = 70/137 (51.09%), Query Frame = 1
BLAST of CmaCh04G000210 vs. TrEMBL
Match: A0A0A0KSY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G290150 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 4.0e-76 Identity = 160/196 (81.63%), Postives = 179/196 (91.33%), Query Frame = 1
BLAST of CmaCh04G000210 vs. TrEMBL
Match: A0A067EUP7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041939mg PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 7.1e-65 Identity = 160/306 (52.29%), Postives = 210/306 (68.63%), Query Frame = 1
BLAST of CmaCh04G000210 vs. TrEMBL
Match: V4STN5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012260mg PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 9.2e-65 Identity = 160/310 (51.61%), Postives = 210/310 (67.74%), Query Frame = 1
BLAST of CmaCh04G000210 vs. TrEMBL
Match: W9S2Z9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009674 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 3.8e-58 Identity = 163/323 (50.46%), Postives = 204/323 (63.16%), Query Frame = 1
BLAST of CmaCh04G000210 vs. TrEMBL
Match: B9SIY6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0596600 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 3.5e-56 Identity = 152/316 (48.10%), Postives = 205/316 (64.87%), Query Frame = 1
BLAST of CmaCh04G000210 vs. TAIR10
Match: AT5G38720.1 (AT5G38720.1 unknown protein) HSP 1 Score: 204.9 bits (520), Expect = 7.2e-53 Identity = 142/311 (45.66%), Postives = 194/311 (62.38%), Query Frame = 1
BLAST of CmaCh04G000210 vs. NCBI nr
Match: gi|778701950|ref|XP_004140427.2| (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X1 [Cucumis sativus]) HSP 1 Score: 367.1 bits (941), Expect = 3.1e-98 Identity = 201/250 (80.40%), Postives = 229/250 (91.60%), Query Frame = 1
BLAST of CmaCh04G000210 vs. NCBI nr
Match: gi|659113953|ref|XP_008456839.1| (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X1 [Cucumis melo]) HSP 1 Score: 362.1 bits (928), Expect = 1.0e-96 Identity = 199/250 (79.60%), Postives = 228/250 (91.20%), Query Frame = 1
BLAST of CmaCh04G000210 vs. NCBI nr
Match: gi|778701953|ref|XP_011655116.1| (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X2 [Cucumis sativus]) HSP 1 Score: 361.7 bits (927), Expect = 1.3e-96 Identity = 199/246 (80.89%), Postives = 225/246 (91.46%), Query Frame = 1
BLAST of CmaCh04G000210 vs. NCBI nr
Match: gi|778701957|ref|XP_004140428.2| (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X3 [Cucumis sativus]) HSP 1 Score: 361.7 bits (927), Expect = 1.3e-96 Identity = 199/246 (80.89%), Postives = 226/246 (91.87%), Query Frame = 1
BLAST of CmaCh04G000210 vs. NCBI nr
Match: gi|659113955|ref|XP_008456840.1| (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X2 [Cucumis melo]) HSP 1 Score: 359.0 bits (920), Expect = 8.5e-96 Identity = 197/249 (79.12%), Postives = 227/249 (91.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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