Cp4.1LG01g05970 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g05970
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	ABC1 family kinase
Location	Cp4.1LG01 : 479262 .. 482149 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACAGCTTACCATTCAGTTTGACATCGTGAGACCACTTCCGGAGCTTACTACAAAGTCTCAAGGTGACCATCTAAAGTCTTGGAGTATTGATCATTGAATGATTGATATTTTTTTTCTTCTCTAAGAAAGAAGAAAAAATTGATATTCGGGATTTAGGTAGTGTTAGGAATCTAACTTATATAAGTCAGTTGATAGATTTAACTAAAAGAATGGGTTGGTTAGAGTATCCAAGATGGGAGATGAGTTTGTTAGCCAAGCCAGCCATGGGAGGAGTTTGACATGGGCAGGAGGTTAAAAATAGGAAGGAAGAAGAGGTGGAGAAGGAATTAGATAGACTTTGGAATTAGTTTATGAGAGAGAGCTCTCGGGAAAAAAAATATATATTAACCATTCTTCTCCATTATAGAGTTCGTTAATTTCATTTGATATGCCTGATATCATTTGAATGGTTATTTCGCTCTTACCATCTGGCTCAATCCCACGTCCTTCCATAACTAAATGGCTGTGGGGTATGTATAGAATGATTGTGGGGTTGGAGTTCAGAGCTTTCTGGGTTAATGTGGTCGAAATTTCTCTTTTTTCTGAACTCCACTCCTCTTCCCTCCCTTCAATGTTAATTTTGAATTTCCATTCTTGGAGTTGCAGATGTCCATTTTCTTGAACTTGTATTATTTCTCAGCACATTTGACGAAATGCTAGTTGTTTGTAGGAATCCATTAATAAGGATGTTCGTCAATGCCTTAAATTACTTGCCATAAGTTCGTCTTATTTTCTTAGACAGCTATTTACAAACTGCAACCACCATTTGTTTGGGACTTCGGAATGGATAGCCACATTTCTTGATGTGTAAATATATATATATACCTACAGGAATAGTTGGGTTTATATCTCCAGAAACATGGGCTGCGATGGACGTATTTTTGGCATCAATTTCATCTGAAGATTATGAACCGATGGCATCTGCCCTCATCCAAATGGGTGCCACGAACAATGACGTCAATGCTGTGGCCTTTGCCAGAGATCTTGGCTCCTTTTGGAATATGCTTTTATTTGATTCATTCAAATTAACTAAAAAAAAACATGTTAGTTTTCTAGAAGGTCATTAAAGTGAGGTAACATCTCTTCTTTTTTCATAAGAATATTCTCCATTTTTTGTCATAGTATATGAACAGAATTTAACAAAAGTATCCTAAATCAATTTGTTCTCATTGTATCAACGCAGGATTTGGATACTGAAATAGCCATAGGAAGGAAAGATTCAACTGCTGTTGCTGCAAATATACTCGTAGACGAGAGGCAAATGAACAAACTTTTGTGTTCGTAGCCGACAAAGTTCATAAACTTCAGGGTACACAGTACAGGTATGCTTTTGCATAGAACATCAGTCTTTAGTCTATATAATCAGAAAGTTTGCGTTTTAGAACCATAAGTATTGAATACTTCTGAATAATGATCACTAGTAAAATGGTCCTTCCTTGCAACTTGAGTTTTGTATTTTTCATTGAAGTCCTAAAATGAAGTAAGACTGAGAGCCTAGGAAAGAAGAATACATTCATGAACTTCTTGAACCATACATCAAGACAAGTTGCTAATTTGGACCACATTTCTCTCCTGTTGCTTTCAAAAACCTATCAAATCTTAAGTACCTTACACAAATTTCAAGGCATCTAGTGCCACAACCCTCATAAAAGTAAGAACATATATATTAAAAGATTTAGAATTTGTCTATCAACGTCATGAGCAATATATTTCACTACACCAAAGAATATTTTTACCTGATTTGGCCACCACGTCCGTTCCACTGATTCTCCGTCTTCCACGTCAAACGGTGGCCAGTGTCGCCGCCTCTCTCCCCGCAATATTCTCTATATTTCAAACTCCTCTCCAAAATCTCTCCCCATAACATTAATAAAGCCCATCACTTTATCAACACCCCACCAACACCAACGATGCAAGTCTCACCCTTCTTCCACCGCCCATCCGCCGTCGTCTTCCCCAAATTCAGGCCAGTTTCAACGGTTTCCCCACCATGGCTCCGCCGTCAGGGTGCGGCACCGAGATGTGTTAGTCAGGGTGGCTGGGGGAGCTCTGTGGCGGAGCTGGAGAGAGAATTTTCGGTGGAGGGAGAAGAGTGGCTGAAACTAGGGAGGCTAGAGGAGAAATGCGGCAGTGGAGGAAAAGGAATGGTGGAGTTGCTTGAATCTTTGGAAAGAGAAGCCATTATGGGGGAAGATGAAGGTCGAGACCCTACTAATTACCATAGGAGGGCTAAGATTTTCAGTACCAGTTCTAGAGTTTTTCAAGCTCTCAAGGAACATTCTGATGATGAATCTGAAGAGAGAGAGAGAGAGAGGAAGAAGAAGGATGAACATGTTCATATGAGATCTTATTCGGAGTTACCAAACTTATTTGACATCACATCAGAGTTCCTTCTTTACAGTTCTTTGAAACACTTCTTTTTCTTATTCATCTCCTCCCAAACCTTCTTCTTCAACCAGCCAAATGGCTGCAAGCTTTTCAGTTTCAAACAGAGAAGAAAAGTATTTATAATCCTTCCCTAGTACCATTAGAGAACAGACAGAAGCAGGAGGTTCCGGAGCTTTGGGCTGAGGAACTTCAACAATCCCTTTTCACCTGTAATCATTTCTTGTATGTTTTTCTATCTGTTAGCTCAACACGAACCATACTTGTACCAAATTTAGTGACACGAATCTTTGTCTGTTCTCATCACTTTTCAGCTCCCTATGTTTCTTAAGTGTCATAGAAACAGAGAGACAGAATAAAGTCTTCCGATGTGGGAGCATGAAAGTTCATTCAATAAAGAACAAGTTCCAAACGGTATATTACACAGAAGACAGAATAAGTAGGGTGGAGGAAAGGTAA

mRNA sequence

ATGAAACAGCTTACCATTCAGTTTGACATCGTGAGACCACTTCCGGAGCTTACTACAAAGTCTCAAGGAATAGTTGGGTTTATATCTCCAGAAACATGGGCTGCGATGGACGTATTTTTGGCATCAATTTCATCTGAAGATTATGAACCGATGGCATCTGCCCTCATCCAAATGGGTGCCACGAACAATGACGTCAATGCTGTGGCCTTTGCCAGAGATCTTGGCTCCTTTTGGAATATGCTTTTATTTGATTCATTCAAATTAACTAAAAAAAAACATGATTTGGATACTGAAATAGCCATAGGAAGGAAAGATTCAACTGCTGTTGCTGCAAATATACTCGTAGACGAGAGGCAAATGAACAAACTTTTGTGTTCGTAGCCGACAAAGTTCATAAACTTCAGGGTACACAGTACAGGTATGCTTTTGCATAGAACATCAGTCTTTAGTCTATATAATCAGAAAGTTTGCGTTTTAGAACCATAAGTATTGAATACTTCTGAATAATGATCACTAGTAAAATGGTCCTTCCTTGCAACTTGAGTTTTGTATTTTTCATTGAAGTCCTAAAATGAAGTAAGACTGAGAGCCTAGGAAAGAAGAATACATTCATGAACTTCTTGAACCATACATCAAGACAAGTTGCTAATTTGGACCACATTTCTCTCCTGTTGCTTTCAAAAACCTATCAAATCTTAAGTACCTTACACAAATTTCAAGGCATCTAGTGCCACAACCCTCATAAAAGTAAGAACATATATATTAAAAGATTTAGAATTTGTCTATCAACGTCATGAGCAATATATTTCACTACACCAAAGAATATTTTTACCTGATTTGGCCACCACGTCCGTTCCACTGATTCTCCGTCTTCCACGTCAAACGGTGGCCAGTGTCGCCGCCTCTCTCCCCGCAATATTCTCTATATTTCAAACTCCTCTCCAAAATCTCTCCCCATAACATTAATAAAGCCCATCACTTTATCAACACCCCACCAACACCAACGATGCAAGTCTCACCCTTCTTCCACCGCCCATCCGCCGTCGTCTTCCCCAAATTCAGGCCAGTTTCAACGGTTTCCCCACCATGGCTCCGCCGTCAGGGTGCGGCACCGAGATGTGTTAGTCAGGGTGGCTGGGGGAGCTCTGTGGCGGAGCTGGAGAGAGAATTTTCGGTGGAGGGAGAAGAGTGGCTGAAACTAGGGAGGCTAGAGGAGAAATGCGGCAGTGGAGGAAAAGGAATGGTGGAGTTGCTTGAATCTTTGGAAAGAGAAGCCATTATGGGGGAAGATGAAGGTCGAGACCCTACTAATTACCATAGGAGGGCTAAGATTTTCAGTACCAGTTCTAGAGTTTTTCAAGCTCTCAAGGAACATTCTGATGATGAATCTGAAGAGAGAGAGAGAGAGAGGAAGAAGAAGGATGAACATGTTCATATGAGATCTTATTCGGAGTTACCAAACTTATTTGACATCACATCAGAGTTCCTTCTTTACAGTTCTTTGAAACACTTCTTTTTCTTATTCATCTCCTCCCAAACCTTCTTCTTCAACCAGCCAAATGGCTGCAAGCTTTTCAGTTTCAAACAGAGAAGAAAAGTATTTATAATCCTTCCCTAGTACCATTAGAGAACAGACAGAAGCAGGAGGTTCCGGAGCTTTGGGCTGAGGAACTTCAACAATCCCTTTTCACCTCTCCCTATGTTTCTTAAGTGTCATAGAAACAGAGAGACAGAATAAAGTCTTCCGATGTGGGAGCATGAAAGTTCATTCAATAAAGAACAAGTTCCAAACGGTATATTACACAGAAGACAGAATAAGTAGGGTGGAGGAAAGGTAA

Coding sequence (CDS)

ATGAAACAGCTTACCATTCAGTTTGACATCGTGAGACCACTTCCGGAGCTTACTACAAAGTCTCAAGGAATAGTTGGGTTTATATCTCCAGAAACATGGGCTGCGATGGACGTATTTTTGGCATCAATTTCATCTGAAGATTATGAACCGATGGCATCTGCCCTCATCCAAATGGGTGCCACGAACAATGACGTCAATGCTGTGGCCTTTGCCAGAGATCTTGGCTCCTTTTGGAATATGCTTTTATTTGATTCATTCAAATTAACTAAAAAAAAACATGATTTGGATACTGAAATAGCCATAGGAAGGAAAGATTCAACTGCTGTTGCTGCAAATATACTCGTAGACGAGAGGCAAATGAACAAACTTTTGTGTTCGTAG

Protein sequence

MKQLTIQFDIVRPLPELTTKSQGIVGFISPETWAAMDVFLASISSEDYEPMASALIQMGATNNDVNAVAFARDLGSFWNMLLFDSFKLTKKKHDLDTEIAIGRKDSTAVAANILVDERQMNKLLCS

Homology

[Close]

BLAST of Cp4.1LG01g05970 vs. Swiss-Prot
Match: Y5520_ARATH (Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Arabidopsis thaliana GN=At5g05200 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.9e-22
Identity = 59/106 (55.66%), Postives = 75/106 (70.75%), Query Frame = 1


Query: 23  GIVGFISPETWAAMDVFLASISSEDYEPMASALIQMGATNNDVNAVAFARDLGSFWNMLL 82
           GIVG ISP+TWAAM+VFLASI++E+YE MASALIQMGATN DV+  AFA+DL   ++ + 
Sbjct: 382 GIVGRISPKTWAAMEVFLASIATEEYESMASALIQMGATNRDVDGKAFAKDLEKMFSSI- 441

Query: 83  FDSFKLTKKKHDLDTEIAIG-----RKDSTAVAANILVDERQMNKL 124
                      +LDTEI +        D+TAVAAN+++DERQMN L
Sbjct: 442 ----------QELDTEIVVATARGTNSDTTAVAANVVMDERQMNAL 476

[Close]

BLAST of Cp4.1LG01g05970 vs. TrEMBL
Match: A0A0A0KMB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G223110 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-27
Identity = 77/106 (72.64%), Postives = 82/106 (77.36%), Query Frame = 1


Query: 23  GIVGFISPETWAAMDVFLASISSEDYEPMASALIQMGATNNDVNAVAFARDLGSFWNMLL 82
           GIVG ISPETWAAMDVFLASI++EDYE MASALIQMGATNNDVNAVAFARDL +     +
Sbjct: 335 GIVGRISPETWAAMDVFLASIATEDYESMASALIQMGATNNDVNAVAFARDLEN-----I 394

Query: 83  FDSFKLTKKKHDLDTEIAI-----GRKDSTAVAANILVDERQMNKL 124
           F + K      DLDTEI I     GR  STAVAANILVDERQMNKL
Sbjct: 395 FSTIK------DLDTEIVIATAREGRSGSTAVAANILVDERQMNKL 429

[Close]

BLAST of Cp4.1LG01g05970 vs. TrEMBL
Match: R0H6B4_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10000658mg PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-21
Identity = 62/106 (58.49%), Postives = 76/106 (71.70%), Query Frame = 1


Query: 23  GIVGFISPETWAAMDVFLASISSEDYEPMASALIQMGATNNDVNAVAFARDLGSFWNMLL 82
           GIVG ISP+TWAAM+VFLASI+SE+YE MASALIQMGATN DV+A AFARDL   ++ + 
Sbjct: 382 GIVGRISPKTWAAMEVFLASIASEEYESMASALIQMGATNRDVDANAFARDLEKMFSSI- 441

Query: 83  FDSFKLTKKKHDLDTEIAIG-----RKDSTAVAANILVDERQMNKL 124
                      +LDTEI +        D+TAVAAN+++DERQMN L
Sbjct: 442 ----------QELDTEIVVATARGTNSDTTAVAANVIMDERQMNTL 476

[Close]

BLAST of Cp4.1LG01g05970 vs. TrEMBL
Match: V4KR64_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10013198mg PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.3e-21
Identity = 64/106 (60.38%), Postives = 76/106 (71.70%), Query Frame = 1


Query: 23  GIVGFISPETWAAMDVFLASISSEDYEPMASALIQMGATNNDVNAVAFARDLGSFWNMLL 82
           GIVG ISP TWAAM+VFLASI++E+YE MASALIQMGATN +V+A AFARDL       +
Sbjct: 382 GIVGRISPTTWAAMEVFLASIATEEYESMASALIQMGATNREVDAKAFARDLEK-----M 441

Query: 83  FDSFKLTKKKHDLDTEIAIG-----RKDSTAVAANILVDERQMNKL 124
           F S K      +LDTEI +        D+TAVAAN++VDERQMN L
Sbjct: 442 FSSIK------ELDTEIVVATARGTNSDTTAVAANVVVDERQMNAL 476

[Close]

BLAST of Cp4.1LG01g05970 vs. TrEMBL
Match: M4CNR0_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.6e-21
Identity = 62/111 (55.86%), Postives = 76/111 (68.47%), Query Frame = 1


Query: 23  GIVGFISPETWAAMDVFLASISSEDYEPMASALIQMGATNNDVNAVAFARDLGSFWNML- 82
           GIVG ISP+TW AM+VFLASI++E+YE MASALIQMGATN DV+A AFARDL   ++ + 
Sbjct: 361 GIVGRISPKTWDAMEVFLASIATEEYESMASALIQMGATNRDVDAKAFARDLEKMFSSIQ 420

Query: 83  ----LFDSFKLTKKKHDLDTEIAIG-----RKDSTAVAANILVDERQMNKL 124
                   F +     +LDTEI +        D TAVAAN++VDERQMN L
Sbjct: 421 ASWPTLSQFWMNLFLQELDTEIVVATARGPNSDRTAVAANVVVDERQMNAL 471

[Close]

BLAST of Cp4.1LG01g05970 vs. TrEMBL
Match: G7KD96_MEDTR (ABC1 family kinase OS=Medicago truncatula GN=MTR_5g068050 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 7.3e-21
Identity = 62/106 (58.49%), Postives = 75/106 (70.75%), Query Frame = 1


Query: 23  GIVGFISPETWAAMDVFLASISSEDYEPMASALIQMGATNNDVNAVAFARDLGSFWNMLL 82
           GIVG ISP+TWAAM+VFL SI+ EDY+ MAS+LIQMGATNNDVNA AFARDL       +
Sbjct: 381 GIVGRISPKTWAAMEVFLGSIAIEDYDSMASSLIQMGATNNDVNAKAFARDLEK-----V 440

Query: 83  FDSFKLTKKKHDLDTEIAIGRKDST-----AVAANILVDERQMNKL 124
           F S K      +LDTEI +  +  T     A++AN++VDERQMN L
Sbjct: 441 FSSMK------ELDTEIVVATRSGTARNPAAISANVVVDERQMNAL 475

[Close]

BLAST of Cp4.1LG01g05970 vs. TAIR10
Match: AT5G05200.1 (AT5G05200.1 Protein kinase superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.1e-23
Identity = 59/106 (55.66%), Postives = 75/106 (70.75%), Query Frame = 1


Query: 23  GIVGFISPETWAAMDVFLASISSEDYEPMASALIQMGATNNDVNAVAFARDLGSFWNMLL 82
           GIVG ISP+TWAAM+VFLASI++E+YE MASALIQMGATN DV+  AFA+DL   ++ + 
Sbjct: 382 GIVGRISPKTWAAMEVFLASIATEEYESMASALIQMGATNRDVDGKAFAKDLEKMFSSI- 441

Query: 83  FDSFKLTKKKHDLDTEIAIG-----RKDSTAVAANILVDERQMNKL 124
                      +LDTEI +        D+TAVAAN+++DERQMN L
Sbjct: 442 ----------QELDTEIVVATARGTNSDTTAVAANVVMDERQMNAL 476

[Close]

BLAST of Cp4.1LG01g05970 vs. NCBI nr
Match: gi|449457387|ref|XP_004146430.1| (PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 2.0e-27
Identity = 77/106 (72.64%), Postives = 82/106 (77.36%), Query Frame = 1


Query: 23  GIVGFISPETWAAMDVFLASISSEDYEPMASALIQMGATNNDVNAVAFARDLGSFWNMLL 82
           GIVG ISPETWAAMDVFLASI++EDYE MASALIQMGATNNDVNAVAFARDL +     +
Sbjct: 386 GIVGRISPETWAAMDVFLASIATEDYESMASALIQMGATNNDVNAVAFARDLEN-----I 445

Query: 83  FDSFKLTKKKHDLDTEIAI-----GRKDSTAVAANILVDERQMNKL 124
           F + K      DLDTEI I     GR  STAVAANILVDERQMNKL
Sbjct: 446 FSTIK------DLDTEIVIATAREGRSGSTAVAANILVDERQMNKL 480

[Close]

BLAST of Cp4.1LG01g05970 vs. NCBI nr
Match: gi|700195576|gb|KGN50753.1| (hypothetical protein Csa_5G223110 [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 2.0e-27
Identity = 77/106 (72.64%), Postives = 82/106 (77.36%), Query Frame = 1


Query: 23  GIVGFISPETWAAMDVFLASISSEDYEPMASALIQMGATNNDVNAVAFARDLGSFWNMLL 82
           GIVG ISPETWAAMDVFLASI++EDYE MASALIQMGATNNDVNAVAFARDL +     +
Sbjct: 335 GIVGRISPETWAAMDVFLASIATEDYESMASALIQMGATNNDVNAVAFARDLEN-----I 394

Query: 83  FDSFKLTKKKHDLDTEIAI-----GRKDSTAVAANILVDERQMNKL 124
           F + K      DLDTEI I     GR  STAVAANILVDERQMNKL
Sbjct: 395 FSTIK------DLDTEIVIATAREGRSGSTAVAANILVDERQMNKL 429

[Close]

BLAST of Cp4.1LG01g05970 vs. NCBI nr
Match: gi|659114246|ref|XP_008456971.1| (PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic [Cucumis melo])

HSP 1 Score: 130.6 bits (327), Expect = 2.0e-27
Identity = 77/106 (72.64%), Postives = 82/106 (77.36%), Query Frame = 1


Query: 23  GIVGFISPETWAAMDVFLASISSEDYEPMASALIQMGATNNDVNAVAFARDLGSFWNMLL 82
           GIVG ISPETWAAMDVFLASI++EDYE MASALIQMGATNNDVNAVAFARDL +     +
Sbjct: 386 GIVGRISPETWAAMDVFLASIATEDYESMASALIQMGATNNDVNAVAFARDLEN-----I 445

Query: 83  FDSFKLTKKKHDLDTEIAI-----GRKDSTAVAANILVDERQMNKL 124
           F + K      DLDTEI I     GR  STAVAANILVDERQMNKL
Sbjct: 446 FSTIK------DLDTEIVIATAREGRSGSTAVAANILVDERQMNKL 480

[Close]

BLAST of Cp4.1LG01g05970 vs. NCBI nr
Match: gi|565458906|ref|XP_006287452.1| (hypothetical protein CARUB_v10000658mg [Capsella rubella])

HSP 1 Score: 110.5 bits (275), Expect = 2.1e-21
Identity = 62/106 (58.49%), Postives = 76/106 (71.70%), Query Frame = 1


Query: 23  GIVGFISPETWAAMDVFLASISSEDYEPMASALIQMGATNNDVNAVAFARDLGSFWNMLL 82
           GIVG ISP+TWAAM+VFLASI+SE+YE MASALIQMGATN DV+A AFARDL   ++ + 
Sbjct: 382 GIVGRISPKTWAAMEVFLASIASEEYESMASALIQMGATNRDVDANAFARDLEKMFSSI- 441

Query: 83  FDSFKLTKKKHDLDTEIAIG-----RKDSTAVAANILVDERQMNKL 124
                      +LDTEI +        D+TAVAAN+++DERQMN L
Sbjct: 442 ----------QELDTEIVVATARGTNSDTTAVAANVIMDERQMNTL 476

[Close]

BLAST of Cp4.1LG01g05970 vs. NCBI nr
Match: gi|1009121717|ref|XP_015877611.1| (PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 109.4 bits (272), Expect = 4.7e-21
Identity = 63/106 (59.43%), Postives = 77/106 (72.64%), Query Frame = 1


Query: 23  GIVGFISPETWAAMDVFLASISSEDYEPMASALIQMGATNNDVNAVAFARDLGSFWNMLL 82
           GIVG ISP+TWAAM+VFLASI++E+YEPMASALI+MGATN DV++ AFARDL       +
Sbjct: 390 GIVGRISPKTWAAMEVFLASIATEEYEPMASALIEMGATNTDVDSKAFARDLEK-----I 449

Query: 83  FDSFKLTKKKHDLDTEIAIG-----RKDSTAVAANILVDERQMNKL 124
           F S K      DLDTE+ I         +TAV+AN++VDERQMN L
Sbjct: 450 FSSIK------DLDTEVVIATARGTNTTATAVSANLVVDERQMNAL 484

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g05970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5520_ARATH	1.9e-22	55.66	Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic O...	[more]

BLAST of Cp4.1LG01g05970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMB7_CUCSA	1.4e-27	72.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G223110 PE=4 SV=1	[more]
R0H6B4_9BRAS	1.5e-21	58.49	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10000658mg PE=4 SV=1	[more]
V4KR64_EUTSA	3.3e-21	60.38	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10013198mg PE=4 SV=1	[more]
M4CNR0_BRARP	5.6e-21	55.86	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
G7KD96_MEDTR	7.3e-21	58.49	ABC1 family kinase OS=Medicago truncatula GN=MTR_5g068050 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g05970 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G05200.1	1.1e-23	55.66	Protein kinase superfamily protein	[more]

BLAST of Cp4.1LG01g05970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457387\|ref\|XP_004146430.1\|	2.0e-27	72.64	PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chlo...	[more]
gi\|700195576\|gb\|KGN50753.1\|	2.0e-27	72.64	hypothetical protein Csa_5G223110 [Cucumis sativus]	[more]
gi\|659114246\|ref\|XP_008456971.1\|	2.0e-27	72.64	PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chlo...	[more]
gi\|565458906\|ref\|XP_006287452.1\|	2.1e-21	58.49	hypothetical protein CARUB_v10000658mg [Capsella rubella]	[more]
gi\|1009121717\|ref\|XP_015877611.1\|	4.7e-21	59.43	PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chlo...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0044710	single-organism metabolic process
biological_process	GO:0015996	chlorophyll catabolic process
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0010287	plastoglobule
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g05970.1	Cp4.1LG01g05970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10566	CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED	coord: 115..124 score: 9.8E-29coord: 23..99 score: 9.8
None	No IPR available	PANTHER	PTHR10566:SF41	SUBFAMILY NOT NAMED	coord: 23..99 score: 9.8E-29coord: 115..124 score: 9.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g05970	Cucsa.143810	Cucumber (Gy14) v1	cgycpeB0388
Cp4.1LG01g05970	CmaCh04G000970	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g05970	CmoCh04G011210	Cucurbita moschata (Rifu)	cmocpeB675
Cp4.1LG01g05970	Cla007311	Watermelon (97103) v1	cpewmB418
Cp4.1LG01g05970	Csa5G223110	Cucumber (Chinese Long) v2	cpecuB438
Cp4.1LG01g05970	MELO3C020171	Melon (DHL92) v3.5.1	cpemeB366
Cp4.1LG01g05970	ClCG07G005270	Watermelon (Charleston Gray)	cpewcgB410
Cp4.1LG01g05970	CSPI05G11700	Wild cucumber (PI 183967)	cpecpiB438
Cp4.1LG01g05970	MELO3C020171.2	Melon (DHL92) v3.6.1	cpemedB442
Cp4.1LG01g05970	CsaV3_5G011120	Cucumber (Chinese Long) v3	cpecucB0542
Cp4.1LG01g05970	Bhi07G000402	Wax gourd	cpewgoB0554
Cp4.1LG01g05970	CsGy5G008950	Cucumber (Gy14) v2	cgybcpeB647
Cp4.1LG01g05970	Carg24465	Silver-seed gourd	carcpeB1258
Cp4.1LG01g05970	Carg00157	Silver-seed gourd	carcpeB0939

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g05970	Cucumber (Chinese Long) v3	cpecucB0552
Cp4.1LG01g05970	Cucurbita pepo (Zucchini)	cpecpeB374
Cp4.1LG01g05970	Cucumber (Gy14) v1	cgycpeB0478
Cp4.1LG01g05970	Cucurbita maxima (Rimu)	cmacpeB723
Cp4.1LG01g05970	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g05970	Wild cucumber (PI 183967)	cpecpiB423
Cp4.1LG01g05970	Bottle gourd (USVL1VR-Ls)	cpelsiB355
Cp4.1LG01g05970	Cucumber (Gy14) v2	cgybcpeB636