Cp4.1LG01g04020 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g04020
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Structural polyprotein
Location	Cp4.1LG01 : 1562873 .. 1567134 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGGGCGGTTTGGCTTGATCGGTTAACAACTTCCCGAAACTTCAATAAAATATCGAGTATGCATACACATTTAATTCGATATCTAATTTGCAGATTTTGGTAAGAGAGGTTCGCTCAGAGGTGAATAATGTGTTGGAATTTTTGGTTGCATCATTTTCTTCTCCTTCTCTTCTGTTTCTCTGCTTCACTTGACGCTCAATTGCAGAATTTGTAAGCTCTAATTTTCAACGTTATGTGTTCTTATTGATCATTGTGTTATTTATTGATCTGATCTATTGGAATTCCATGGCGATTTGTTGCGTTCGTTCTTAATGTCAGAGGCAGAATTGGGAGAAACGAAGAAACTGAGATAGGGTTTGGGCGCAGAGCTCTGTTGAGTTTCAAAGAGTCTCCTCATGGAAGTAACGTTACCTTCGATTGCTCTCGTTCCGGGCCCTGTGTTGCGTGCCTCCTCTCCGAAAAGGTATCTGTTCGTTAGGTCTTTAAATCGAGATAAACTAAATACTGGTGCTCTTATTCATTCCTGTTCAGTTGGCATGCGTTGTTTTTTTGGGTTGAACTATCTGGAAATTATGATCTAGCTTGTTGGAGTTCTGAAACAGTGAAGCTTTTCGATATCATTTTTGTTATAGCGAGTAGCAACGAGATATTGCAAATGCATGTCAGATTTTTCATCATGCAGCAATGAATTTCCAGTTTTCAATGCATTAGAATTTGATAATGATAGGCCCCTTGCGTTCTCGTTCTCTTTGACCAAAATTTTATGTTGTGCTTTCTTTGAAAATTTGTTCACGCTGGGTATACTTTGTTTAATTTGTAACAAATGCACTTACCCAGTTCACAAAACAGAAAAATAATAATACTAAAAAGACAAAAGATCGACACCAAAGTTTCCTGTCTTTGGATCCTCTTAACCTATTTTCCCATATCCTTTCTGAAAATCCTTCTCTTTTTGGTTAGTTGTAGGGGATTTGAACATGGATACTGTGAGATCCCACATCGGTTGAAGAGGGAAGCAAAGCATTCTTTATAAGGGTGTAGAAATCTCTTCCTAGTAGATGCGTTTTAAAACCTTGAGGGGAAGCCCAAAGAAGACAATATTTACTAGCGGTAGACTTGAAATGTTACAAATGGTATCAAAGCTAGACACAGGGCGGTATGCCAACGGGGATGATGGGCCTCCAAGGGGGTGGATTGTGAGATCACACATTAGATGCGTTTTAAAACCTTGAGAGTAAGTCCAAAAAAGTATTTGCAGGCGGACTGTTTGGAAGGTTACAGATACCACGATTTTATAGTCACAGGGAGGGACAGACAAGGTTGACTCTGTAGTTAATATTTGGATAGTGCTAGGCTTTCAGTTCTTAATGTGTTAGGATTGGGAATGGTAGTCCGTTGCATATTTTCCATCTTTAAATCCAATGTTTCATGTTTAATGGTAGCTTTTGCTTTGCTTTTTGGTATAAAATTTAAAGTAGAAGTAATTTTTCATTATCTTCTTCTTTTTGGTCACATAGAAGGATGAAAATTATGGCTGCAGTGAGACTGGGTATCGTATTCCCCTGAAATGTGTGGAAGTCAAAGACACATCAAAAGTTTCCAATGAGAAAAAATCTCATGATGGTCGCTCAACACTTGAAATGTCTTATGAGCACAAGCTTGTGAACCATTTGCAGAGTGATGCAAGCGATCATGCTTCATCAGTTGCACACAGACATCAACGGGATGGTTCTATCTCTGGAACAGTTGGTTCCCAGGATTACATCATTTACAGAAGCTGTATTCCATCAGTTAACGATGAAAAGTTGTCTGTACTTGGTTTTGAGGTATGCCATTTATCTTAGCTGCTCTATTTCAAAGGGTTTAGTTTACTGCAATTAATGGTTTAATGGCCGTTGCATGCCTCATTATCTTCTCTCAAATTTCGATATATTGCTTTACTCTGTATAATTGATTTTGAATCCGAAAGTAGTCATCAACTAAATAGCTTTGCAGTCATGCTACTATGGTTACTGCTGTTCTTATTTATTTTAATTGTTGTCTGTAACTTTTACTTGCCACAAGATCCTATTTACTTCTTAAGTAGAGAATGCATCAATGGGAGGTGGACAGTTAAGGCACCTCATGAGACCTGTTCATCTTTTACAGAACCAAAATTCGATGGCTAATCAGTGTAATCTATGGATTTTCTTCAGCAGTTCTGTTGTTAAGATGATAGCTAACATCATATCTAGTCAGATTTGCAGTACTAAGGAGGTTCATTCTTTGTGCTACTTTGTTGTCAATCTATCTTTTTTCTTCTTCACATCTTGTATTTTGTAAAGTTAGATGGAAGAATAATTGTTCCTCTTCATATTAAAATCAAACTATTGTTAATTAAGTCAATAATGAATTGGGCTTAAAATACCGTCTTCTATTTTTCAAAAGATCCCACATCAGTTGGTGTGGAAACGTCTCACCAACAGACGCGTACGCGTTTTAAAACCTTGAGGGGAAGCCTGGAAGGGAAAGTCCAAAGAGGACAATATTTGCTAGCAGTGGGCTTGGGCTGTTACAAATGGTCTCAGAGTTAGGCATTGGGCAGTGTGCTAGCGAGGACGCTGGCTCCCGAGGGGTGGATTGTGAGATCCCATTTTGGTTAGAGAGGGGAGCGAAGTAGTCCTCATAAAGGTTGGAAACCTCTCCCTATTAGACACGTTGTAAAACCTTGAGGAAAAGTCCGGACAGGAAAGCCTAAAGAGAATAATATGTGCTGGTAGTGGACTTGGGCTTTTACATTCGAAATAGTGGCGAACAGAACAGGTGAAAACTATTCTCCACTTCCTTTCGAGATGGAAAATGATCATTGAGCTGTTGGTATTTGGGAATTTTGAAGTATTGCAATATGTGAAGAGGAGATATCCTTATCTAACTGGTTGTCTAATAGAGCATGCTACTTTTATCTTGATTGGATTCATTTCATTTTGTGTACTGTTGTGGACAGGGCATTGTGCTAGGCTTGCTGCTTATAAGCGGTTCAGTTGTGTACTTCAGAAGGAAGCGAAGTGTTTCAACGGCTGGTTTTGCATCTGGCAGGGTGCAGTCAAATTCCAGGTTCTAGTACATCACTCATTTTTTCTTACAATTATCCACCAATTCTACACATTCAAATTATACAAAGAATTAGATTCATTTGAACAACTATTTCCTTTCCTTTTTCTCTGTTCTAAAAGCTATACCAAAATTGCCCATCTATGAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGCCCAAGCCCATATATATACACATAGAGAGAGGGAGATATGTACAATCCAGATGTTTTTTATTTTGGATTATTGAAATTAGAATACAAATAAGAGGCATGTTGTTTGAAGTTAATTAACATTAAAGGGTAACGTTGAGAAGAACCAAGAGACATGAGTTGCTCTCAAACTGGAGGAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGGTCAGGCGGGTGGCCGTCCTTTTACTCCCGTTCGCCTGCAAACCAAACCCAACAAATATTAACTCGCTTAAAATCAATATATATGGTAGGAAAAAAATTTCACACCCTCATAAAAAATGTTTCATTCTCTTCTCAAAATGACGTGGGATCTTACAAAAGTCTAATAAGAAATTTGAACACAACCCGATATCATTGTCATGTTAAAGTTGATCTTCGAAAAAAATCACCTGTTATGAATTGGGTCGGGTCCTTTAGGGACTTTAACTTTGCTCATGAAGTTAAGCTCCTTGGCTTGCTTCATATGGCTTCCCTCAAACTCAGACCTAGCTGCCGGCCAGCTTGTTGTTTTTGCTACCGACCGTTCTCTGCTGTCGGGCATGCCAACGATTAAAAGCCATACAAACATCCCAACTGCCGCAGCTCCAAGCAAGACCTTGAAGTAAGAAAACGAGCAACAACTACCTTCACTTCTCATAAATATATATATATACACTTCTGTCTATGTACGTCGAAAGAGATTAGTTAACTTTACGACTCGAAGAGGCAAGGACGTCAAGCAATGAGAAGAAGAAGAGAGGAAGAGGAAGAAGAAGGAGAGGAGTTTGTTTAGAAAAGGGGAGTGCATGTTTAATTAGGGAGTTGTCTTTTTTTTCTTTATAGGGTTGGTGGATTCTGTTGCACTTTTCTCAAACCCTGCCTTGCCTGTTTGTTTATAATTGACACACACACACACCATTATATTCTAACATATCATATTA

mRNA sequence

AGGGGGCGGTTTGGCTTGATCGGTTAACAACTTCCCGAAACTTCAATAAAATATCGAGTATGCATACACATTTAATTCGATATCTAATTTGCAGATTTTGGTAAGAGAGGTTCGCTCAGAGGTGAATAATGTGTTGGAATTTTTGGTTGCATCATTTTCTTCTCCTTCTCTTCTGTTTCTCTGCTTCACTTGACGCTCAATTGCAGAATTTAGGCAGAATTGGGAGAAACGAAGAAACTGAGATAGGGTTTGGGCGCAGAGCTCTGTTGAGTTTCAAAGAGTCTCCTCATGGAAGTAACGTTACCTTCGATTGCTCTCGTTCCGGGCCCTGTGTTGCGTGCCTCCTCTCCGAAAAGAAGGATGAAAATTATGGCTGCAGTGAGACTGGGTATCGTATTCCCCTGAAATGTGTGGAAGTCAAAGACACATCAAAAGTTTCCAATGAGAAAAAATCTCATGATGGTCGCTCAACACTTGAAATGTCTTATGAGCACAAGCTTGTGAACCATTTGCAGAGTGATGCAAGCGATCATGCTTCATCAGTTGCACACAGACATCAACGGGATGGTTCTATCTCTGGAACAGTTGGTTCCCAGGATTACATCATTTACAGAAGCTGTATTCCATCAGTTAACGATGAAAAGTTGTCTGTACTTGGTTTTGAGGGCATTGTGCTAGGCTTGCTGCTTATAAGCGGTTCAGTTGTGTACTTCAGAAGGAAGCGAAGTGTTTCAACGGCTGGTTTTGCATCTGGCAGGGTGCAGTCAAATTCCAGGTTCTAGTACATCACTCATTTTTTCTTACAATTATCCACCAATTCTACACATTCAAATTATACAAAGAATTAGATTCATTTGAACAACTATTTCCTTTCCTTTTTCTCTGTTCTAAAAGCTATACCAAAATTGCCCATCTATGAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGCCCAAGCCCATATATATACACATAGAGAGAGGGAGATATGTACAATCCAGATGTTTTTTATTTTGGATTATTGAAATTAGAATACAAATAAGAGGCATGTTGTTTGAAGTTAATTAACATTAAAGGGTAACGTTGAGAAGAACCAAGAGACATGAGTTGCTCTCAAACTGGAGGAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGGTCAGGCGGGTGGCCGTCCTTTTACTCCCGTTCGCCTGCAAACCAAACCCAACAAATATTAACTCGCTTAAAATCAATATATATGGTAGGAAAAAAATTTCACACCCTCATAAAAAATGTTTCATTCTCTTCTCAAAATGACGTGGGATCTTACAAAAGTCTAATAAGAAATTTGAACACAACCCGATATCATTGTCATGTTAAAGTTGATCTTCGAAAAAAATCACCTGTTATGAATTGGGTCGGGTCCTTTAGGGACTTTAACTTTGCTCATGAAGTTAAGCTCCTTGGCTTGCTTCATATGGCTTCCCTCAAACTCAGACCTAGCTGCCGGCCAGCTTGTTGTTTTTGCTACCGACCGTTCTCTGCTGTCGGGCATGCCAACGATTAAAAGCCATACAAACATCCCAACTGCCGCAGCTCCAAGCAAGACCTTGAAGTAAGAAAACGAGCAACAACTACCTTCACTTCTCATAAATATATATATATACACTTCTGTCTATGTACGTCGAAAGAGATTAGTTAACTTTACGACTCGAAGAGGCAAGGACGTCAAGCAATGAGAAGAAGAAGAGAGGAAGAGGAAGAAGAAGGAGAGGAGTTTGTTTAGAAAAGGGGAGTGCATGTTTAATTAGGGAGTTGTCTTTTTTTTCTTTATAGGGTTGGTGGATTCTGTTGCACTTTTCTCAAACCCTGCCTTGCCTGTTTGTTTATAATTGACACACACACACACCATTATATTCTAACATATCATATTA

Coding sequence (CDS)

ATGTGTTGGAATTTTTGGTTGCATCATTTTCTTCTCCTTCTCTTCTGTTTCTCTGCTTCACTTGACGCTCAATTGCAGAATTTAGGCAGAATTGGGAGAAACGAAGAAACTGAGATAGGGTTTGGGCGCAGAGCTCTGTTGAGTTTCAAAGAGTCTCCTCATGGAAGTAACGTTACCTTCGATTGCTCTCGTTCCGGGCCCTGTGTTGCGTGCCTCCTCTCCGAAAAGAAGGATGAAAATTATGGCTGCAGTGAGACTGGGTATCGTATTCCCCTGAAATGTGTGGAAGTCAAAGACACATCAAAAGTTTCCAATGAGAAAAAATCTCATGATGGTCGCTCAACACTTGAAATGTCTTATGAGCACAAGCTTGTGAACCATTTGCAGAGTGATGCAAGCGATCATGCTTCATCAGTTGCACACAGACATCAACGGGATGGTTCTATCTCTGGAACAGTTGGTTCCCAGGATTACATCATTTACAGAAGCTGTATTCCATCAGTTAACGATGAAAAGTTGTCTGTACTTGGTTTTGAGGGCATTGTGCTAGGCTTGCTGCTTATAAGCGGTTCAGTTGTGTACTTCAGAAGGAAGCGAAGTGTTTCAACGGCTGGTTTTGCATCTGGCAGGGTGCAGTCAAATTCCAGGTTCTAG

Protein sequence

MCWNFWLHHFLLLLFCFSASLDAQLQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF

Homology

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BLAST of Cp4.1LG01g04020 vs. TrEMBL
Match: A0A0A0KVR8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604010 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 6.5e-86
Identity = 168/208 (80.77%), Postives = 182/208 (87.50%), Query Frame = 1


Query: 10  FLLLLFCFSASLDAQLQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCV 69
           FLLLLF FSASL AQ QN  R+G +EE EIGFGRRALLSFKE+P GSNVTF+CSRSGPCV
Sbjct: 10  FLLLLFTFSASLHAQSQNTDRVGGDEEIEIGFGRRALLSFKETPQGSNVTFECSRSGPCV 69

Query: 70  ACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQ 129
           ACL SEK DE Y CSETGYRIPLKCVE+KDTSKVSN KKSH+GRS L++SYEHK+V    
Sbjct: 70  ACLYSEKNDEKYRCSETGYRIPLKCVEIKDTSKVSNGKKSHNGRSMLDISYEHKVV---P 129

Query: 130 SDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLIS 189
            DAS +ASS+AHR+ RDGS+S T GSQ YI YRSCIPSVN+EKLSVLGFEGIVL LLLIS
Sbjct: 130 DDASGNASSIAHRNLRDGSVSSTDGSQSYITYRSCIPSVNEEKLSVLGFEGIVLCLLLIS 189

Query: 190 GSVVYFRRKRSVSTAGFASGRVQSNSRF 218
           GSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 190 GSVVYFRRKRSVSTAGFASGRVQSNSRF 214

[Close]

BLAST of Cp4.1LG01g04020 vs. TrEMBL
Match: M5XNF3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011511mg PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.4e-50
Identity = 119/206 (57.77%), Postives = 139/206 (67.48%), Query Frame = 1


Query: 12  LLLFCFSASLDAQLQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVAC 71
           LLLF F A     L ++G      +   G GRRALLS KE+P GSN TF+CS +GPCV C
Sbjct: 9   LLLFFFVAFA---LLSVGHATIQGDESEGIGRRALLSLKETPRGSNTTFECSPAGPCVPC 68

Query: 72  LLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQSD 131
           L SEKKDE Y CSETGYRIPLKCVE K + K    K S   RSTLE+ Y +    H   +
Sbjct: 69  LYSEKKDEKYRCSETGYRIPLKCVETKRSLKDEKAKGSQKSRSTLEI-YHNDAELH---N 128

Query: 132 ASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLISGS 191
           A +  +SV HR   D S +   G Q YI YRSCIP+V++EKLSVLGFE IVL  LLISGS
Sbjct: 129 AEELGTSVKHRSLLDDSATLEDGPQAYITYRSCIPAVSEEKLSVLGFEMIVLFFLLISGS 188

Query: 192 VVYFRRKRSVSTAGFASGRVQSNSRF 218
           VVYFRRK++VS  GF +GR+QSNSRF
Sbjct: 189 VVYFRRKQTVSMTGFGAGRIQSNSRF 207

[Close]

BLAST of Cp4.1LG01g04020 vs. TrEMBL
Match: A0A067JBW4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21738 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.9e-48
Identity = 115/207 (55.56%), Postives = 138/207 (66.67%), Query Frame = 1


Query: 12  LLLFCFSASLDAQLQNLGRIGRNEETEIG-FGRRALLSFKESPHGSNVTFDCSRSGPCVA 71
           L+LF  SA+L     +L  I  +++T  G  G R LL FKE P GSN+TFDCS SG CV 
Sbjct: 12  LVLFLVSAAL----LSLSSINASDQTTNGGSGSRVLLVFKEKPEGSNLTFDCSPSGACVP 71

Query: 72  CLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQS 131
           C  SEK DE Y CSETGYRIPLKC+E KD  K  N+KKS   RS +E+S E+   + +  
Sbjct: 72  CQYSEKTDEKYRCSETGYRIPLKCIETKDNIKNGNDKKSQKTRSVIEISNENANPHAMLH 131

Query: 132 DASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLISG 191
           D    A+S   R   D S +   GSQ YI YRSCIP VN+EKLSVLGFEGI+L L LISG
Sbjct: 132 D----AASNEQRSLLDDSSTLEDGSQAYITYRSCIPPVNEEKLSVLGFEGIILCLFLISG 191

Query: 192 SVVYFRRKRSVSTAGFASGRVQSNSRF 218
           SVVYFRRK++V+ +G   GR+Q NSRF
Sbjct: 192 SVVYFRRKQTVTMSGVGGGRIQMNSRF 210

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BLAST of Cp4.1LG01g04020 vs. TrEMBL
Match: A0A067GST4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028438mg PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.4e-48
Identity = 111/208 (53.37%), Postives = 140/208 (67.31%), Query Frame = 1


Query: 10  FLLLLFCFSASLDAQLQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCV 69
           F+ LLF  +  L +  Q       ++  +   G+R  LSFKE+P GSN TF+CS SGPCV
Sbjct: 6   FIFLLFIIT-QLSSPHQASTYQPESKSADRSVGQRHFLSFKETPSGSNRTFECSPSGPCV 65

Query: 70  ACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQ 129
            CL SEK DE Y CSETGYRIPLKCVE +D S V NEKK+   R  LE+S + +  + + 
Sbjct: 66  RCLYSEKIDEKYRCSETGYRIPLKCVESEDVSNVENEKKT---RGALEISTDSEKPHVIL 125

Query: 130 SDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLIS 189
            DA +  +S+ HR   + S +    SQ YI YRSCIP+VN+EKLSVLGFEGIV  LLLIS
Sbjct: 126 HDAVELTTSIKHRSLLEDSSTSKGKSQAYITYRSCIPAVNEEKLSVLGFEGIVFCLLLIS 185

Query: 190 GSVVYFRRKRSVSTAGFASGRVQSNSRF 218
           GS VY RRKR+V+ +G  +GR+Q+NSRF
Sbjct: 186 GSAVYLRRKRTVTMSGIGTGRIQANSRF 209

[Close]

BLAST of Cp4.1LG01g04020 vs. TrEMBL
Match: M5Y576_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011511mg PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.2e-48
Identity = 118/206 (57.28%), Postives = 138/206 (66.99%), Query Frame = 1


Query: 12  LLLFCFSASLDAQLQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVAC 71
           LLLF F A     L ++G      +   G GRRALLS KE+P GSN TF+CS +GPCV C
Sbjct: 9   LLLFFFVAFA---LLSVGHATIQGDESEGIGRRALLSLKETPRGSNTTFECSPAGPCVPC 68

Query: 72  LLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQSD 131
           L SEK DE Y CSETGYRIPLKCVE K + K    K S   RSTLE+ Y +    H   +
Sbjct: 69  LYSEK-DEKYRCSETGYRIPLKCVETKRSLKDEKAKGSQKSRSTLEI-YHNDAELH---N 128

Query: 132 ASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLISGS 191
           A +  +SV HR   D S +   G Q YI YRSCIP+V++EKLSVLGFE IVL  LLISGS
Sbjct: 129 AEELGTSVKHRSLLDDSATLEDGPQAYITYRSCIPAVSEEKLSVLGFEMIVLFFLLISGS 188

Query: 192 VVYFRRKRSVSTAGFASGRVQSNSRF 218
           VVYFRRK++VS  GF +GR+QSNSRF
Sbjct: 189 VVYFRRKQTVSMTGFGAGRIQSNSRF 206

[Close]

BLAST of Cp4.1LG01g04020 vs. TAIR10
Match: AT1G69980.1 (AT1G69980.1 unknown protein)

HSP 1 Score: 157.5 bits (397), Expect = 9.1e-39
Identity = 90/210 (42.86%), Postives = 126/210 (60.00%), Query Frame = 1


Query: 11  LLLLFCFSASLDAQLQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVA 70
           +  +F +++S+ + +         +E     GRR LL FKE+P GSN+TF CS SGPCV+
Sbjct: 12  IFFIFIYASSIPSSILARAHEHDGDEEIRSVGRRFLLGFKETPKGSNITFACSPSGPCVS 71

Query: 71  CLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQS 130
           C  SEK+ E Y CSETGYRIP KC EV++  +V   KK+ +  +              Q+
Sbjct: 72  CNSSEKRKEKYRCSETGYRIPFKCKEVRE--EVDAHKKNGEEET--------------QN 131

Query: 131 DASDHASSVAHRHQR--DGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLI 190
           D S++    A       D S +  V SQ Y  YRSC+PS ++EKLSVLGFE I+LGL L+
Sbjct: 132 DQSNNNDEEAKTRNLLDDSSPATKVKSQSYKTYRSCVPSADEEKLSVLGFESIMLGLFLL 191

Query: 191 SGSVVYFRRKRSVSTAGF-ASGRVQSNSRF 218
           SG+ +Y R++++V   G  +SGR+Q NSRF
Sbjct: 192 SGAAIYIRKRQTVPMLGVSSSGRLQGNSRF 205

[Close]

BLAST of Cp4.1LG01g04020 vs. NCBI nr
Match: gi|449434859|ref|XP_004135213.1| (PREDICTED: uncharacterized protein LOC101207563 [Cucumis sativus])

HSP 1 Score: 325.1 bits (832), Expect = 9.4e-86
Identity = 168/208 (80.77%), Postives = 182/208 (87.50%), Query Frame = 1


Query: 10  FLLLLFCFSASLDAQLQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCV 69
           FLLLLF FSASL AQ QN  R+G +EE EIGFGRRALLSFKE+P GSNVTF+CSRSGPCV
Sbjct: 10  FLLLLFTFSASLHAQSQNTDRVGGDEEIEIGFGRRALLSFKETPQGSNVTFECSRSGPCV 69

Query: 70  ACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQ 129
           ACL SEK DE Y CSETGYRIPLKCVE+KDTSKVSN KKSH+GRS L++SYEHK+V    
Sbjct: 70  ACLYSEKNDEKYRCSETGYRIPLKCVEIKDTSKVSNGKKSHNGRSMLDISYEHKVV---P 129

Query: 130 SDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLIS 189
            DAS +ASS+AHR+ RDGS+S T GSQ YI YRSCIPSVN+EKLSVLGFEGIVL LLLIS
Sbjct: 130 DDASGNASSIAHRNLRDGSVSSTDGSQSYITYRSCIPSVNEEKLSVLGFEGIVLCLLLIS 189

Query: 190 GSVVYFRRKRSVSTAGFASGRVQSNSRF 218
           GSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 190 GSVVYFRRKRSVSTAGFASGRVQSNSRF 214

[Close]

BLAST of Cp4.1LG01g04020 vs. NCBI nr
Match: gi|659090936|ref|XP_008446282.1| (PREDICTED: uncharacterized protein LOC103489059 [Cucumis melo])

HSP 1 Score: 319.7 bits (818), Expect = 3.9e-84
Identity = 167/217 (76.96%), Postives = 180/217 (82.95%), Query Frame = 1


Query: 1   MCWNFWLHHFLLLLFCFSASLDAQLQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60
           M W F    FLLLLF FSASL AQ  N  R+  +EE  IGFGRRALLSFKE+P GSNVTF
Sbjct: 1   MYWKFSFLPFLLLLFTFSASLHAQSLNTDRVSGDEEIGIGFGRRALLSFKETPQGSNVTF 60

Query: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120
           +CSRSGPCVACL SEK DE Y CSETGYRIPLKCVE+KDTSKVSNEKKSH+GRS L++SY
Sbjct: 61  ECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDTSKVSNEKKSHNGRSMLDISY 120

Query: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG 180
           EHK+V     DAS HASS AHR+ RDGS+S T G Q YI YRSCIPSVN+EKLSVLGFEG
Sbjct: 121 EHKVV---PDDASGHASSTAHRNLRDGSVSSTDGPQSYITYRSCIPSVNEEKLSVLGFEG 180

Query: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 218
           IVL LLLISGSVVYFRRKRS+S AGFASGRVQSNSRF
Sbjct: 181 IVLCLLLISGSVVYFRRKRSISMAGFASGRVQSNSRF 214

[Close]

BLAST of Cp4.1LG01g04020 vs. NCBI nr
Match: gi|596287730|ref|XP_007225822.1| (hypothetical protein PRUPE_ppa011511mg [Prunus persica])

HSP 1 Score: 206.5 bits (524), Expect = 4.9e-50
Identity = 119/206 (57.77%), Postives = 139/206 (67.48%), Query Frame = 1


Query: 12  LLLFCFSASLDAQLQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVAC 71
           LLLF F A     L ++G      +   G GRRALLS KE+P GSN TF+CS +GPCV C
Sbjct: 9   LLLFFFVAFA---LLSVGHATIQGDESEGIGRRALLSLKETPRGSNTTFECSPAGPCVPC 68

Query: 72  LLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQSD 131
           L SEKKDE Y CSETGYRIPLKCVE K + K    K S   RSTLE+ Y +    H   +
Sbjct: 69  LYSEKKDEKYRCSETGYRIPLKCVETKRSLKDEKAKGSQKSRSTLEI-YHNDAELH---N 128

Query: 132 ASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLISGS 191
           A +  +SV HR   D S +   G Q YI YRSCIP+V++EKLSVLGFE IVL  LLISGS
Sbjct: 129 AEELGTSVKHRSLLDDSATLEDGPQAYITYRSCIPAVSEEKLSVLGFEMIVLFFLLISGS 188

Query: 192 VVYFRRKRSVSTAGFASGRVQSNSRF 218
           VVYFRRK++VS  GF +GR+QSNSRF
Sbjct: 189 VVYFRRKQTVSMTGFGAGRIQSNSRF 207

[Close]

BLAST of Cp4.1LG01g04020 vs. NCBI nr
Match: gi|645229489|ref|XP_008221490.1| (PREDICTED: uncharacterized protein LOC103321462 [Prunus mume])

HSP 1 Score: 206.1 bits (523), Expect = 6.3e-50
Identity = 117/206 (56.80%), Postives = 137/206 (66.50%), Query Frame = 1


Query: 12  LLLFCFSASLDAQLQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVAC 71
           LLLF F A     L ++G      +   G GRRALLS KE+P GSN TF+CS +GPCV C
Sbjct: 9   LLLFFFLAFA---LLSVGHATIQSDESEGIGRRALLSLKETPRGSNTTFECSPAGPCVPC 68

Query: 72  LLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQSD 131
           L SEKKDE Y CSETGYRIPLKCVE K +SK    K S   RSTL + +         +D
Sbjct: 69  LYSEKKDEKYRCSETGYRIPLKCVETKRSSKDEKAKGSQKSRSTLGIYH---------ND 128

Query: 132 ASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLISGS 191
           A +  +SV HR   D S +   G Q YI YRSCIP+V++EKLSVLGFE IVL  LLISGS
Sbjct: 129 AEELGTSVKHRSLLDDSATLEDGPQAYITYRSCIPAVSEEKLSVLGFEVIVLFFLLISGS 188

Query: 192 VVYFRRKRSVSTAGFASGRVQSNSRF 218
           VVY RRK++VS  GF +GR+QSNSRF
Sbjct: 189 VVYLRRKQTVSMTGFGAGRIQSNSRF 202

[Close]

BLAST of Cp4.1LG01g04020 vs. NCBI nr
Match: gi|658009503|ref|XP_008339965.1| (PREDICTED: uncharacterized protein LOC103402955 [Malus domestica])

HSP 1 Score: 202.2 bits (513), Expect = 9.2e-49
Identity = 121/209 (57.89%), Postives = 145/209 (69.38%), Query Frame = 1


Query: 10  FLLLLFCFSASLDAQLQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCV 69
           FLLLLF  + +L +       IG +EE+  G GRRALLS KE+PHGSN T++CS +GPCV
Sbjct: 8   FLLLLFSIAFNLLSLAH--ATIG-SEESGGGIGRRALLSLKETPHGSNATYECSPAGPCV 67

Query: 70  ACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQ 129
            CL  EKKDE Y CSETGYRIPLKCVE+K  SK +  K +   RS LE+S+     N  +
Sbjct: 68  PCLYPEKKDEKYRCSETGYRIPLKCVEMKHGSKEAKMKGAQKSRSALEISH-----NIEE 127

Query: 130 SDASDHASS-VAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLI 189
           SD +D   + V HR   D   S T   Q YI YRSCIP+VN+EKLSVLGFE IVL LLLI
Sbjct: 128 SDKADBLGTYVKHRSLLDD--SSTQEPQAYITYRSCIPAVNEEKLSVLGFEVIVLFLLLI 187

Query: 190 SGSVVYFRRKRSVSTAGFASGRVQSNSRF 218
           SGS+VYFRRK++ STAGF   R+Q+NSRF
Sbjct: 188 SGSLVYFRRKQTTSTAGFV--RIQNNSRF 204

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g04020 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g04020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVR8_CUCSA	6.5e-86	80.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604010 PE=4 SV=1	[more]
M5XNF3_PRUPE	3.4e-50	57.77	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011511mg PE=4 SV=1	[more]
A0A067JBW4_JATCU	1.9e-48	55.56	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21738 PE=4 SV=1	[more]
A0A067GST4_CITSI	2.4e-48	53.37	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028438mg PE=4 SV=1	[more]
M5Y576_PRUPE	3.2e-48	57.28	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011511mg PE=4 SV=1	[more]

BLAST of Cp4.1LG01g04020 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69980.1	9.1e-39	42.86	unknown protein	[more]

BLAST of Cp4.1LG01g04020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434859\|ref\|XP_004135213.1\|	9.4e-86	80.77	PREDICTED: uncharacterized protein LOC101207563 [Cucumis sativus]	[more]
gi\|659090936\|ref\|XP_008446282.1\|	3.9e-84	76.96	PREDICTED: uncharacterized protein LOC103489059 [Cucumis melo]	[more]
gi\|596287730\|ref\|XP_007225822.1\|	4.9e-50	57.77	hypothetical protein PRUPE_ppa011511mg [Prunus persica]	[more]
gi\|645229489\|ref\|XP_008221490.1\|	6.3e-50	56.80	PREDICTED: uncharacterized protein LOC103321462 [Prunus mume]	[more]
gi\|658009503\|ref\|XP_008339965.1\|	9.2e-49	57.89	PREDICTED: uncharacterized protein LOC103402955 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g04020.1	Cp4.1LG01g04020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36336	FAMILY NOT NAMED	coord: 6..217 score: 7.2
None	No IPR available	PANTHER	PTHR36336:SF1	SUBFAMILY NOT NAMED	coord: 6..217 score: 7.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g04020	Cucsa.285610	Cucumber (Gy14) v1	cgycpeB0755
Cp4.1LG01g04020	CmaCh04G003150	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g04020	CmaCh04G016090	Cucurbita maxima (Rimu)	cmacpeB724
Cp4.1LG01g04020	CmoCh04G016870	Cucurbita moschata (Rifu)	cmocpeB676
Cp4.1LG01g04020	CmoCh04G003310	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g04020	Cla010131	Watermelon (97103) v1	cpewmB434
Cp4.1LG01g04020	Csa5G604010	Cucumber (Chinese Long) v2	cpecuB419
Cp4.1LG01g04020	MELO3C012041	Melon (DHL92) v3.5.1	cpemeB380
Cp4.1LG01g04020	ClCG05G024860	Watermelon (Charleston Gray)	cpewcgB395
Cp4.1LG01g04020	CSPI05G23160	Wild cucumber (PI 183967)	cpecpiB419
Cp4.1LG01g04020	Lsi04G004990	Bottle gourd (USVL1VR-Ls)	cpelsiB363
Cp4.1LG01g04020	MELO3C012041.2	Melon (DHL92) v3.6.1	cpemedB439
Cp4.1LG01g04020	CsaV3_5G032050	Cucumber (Chinese Long) v3	cpecucB0521
Cp4.1LG01g04020	Bhi07G001336	Wax gourd	cpewgoB0571
Cp4.1LG01g04020	CsGy5G022640	Cucumber (Gy14) v2	cgybcpeB631
Cp4.1LG01g04020	Carg01749	Silver-seed gourd	carcpeB1178
Cp4.1LG01g04020	Carg07994	Silver-seed gourd	carcpeB0527

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g04020	Cp4.1LG01g12850	Cucurbita pepo (Zucchini)	cpecpeB375

The following block(s) are covering this gene:

None