CmoCh04G003310 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G003310
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transmembrane protein, putative
Location	Cmo_Chr04 : 1619475 .. 1623685 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGTTCGCTCAGAGGTGAATAATGTGTTGGAATTTTTCGTTGCATCATTTTCTTCTCCTTCTCTTCTGTTTCTCTGCTTCACTTGACGCTCAACAGAATTTGTAAGCTCTAATTTTCTACGTTATGTGTTCTTATTGATCATTGTGTTATTTATTGATCTGATCTATTGGAATTCCATGGCGAATTGTTGCGTTCGTTCTTAATGTCAGAGGCAGAATCGGGAGAAACGAAGAAACTGAGATAGGGTTTGGGCGCAGAGCTCTGTTGAGTTTCAAAGAGTCTCCTCATGGAAGTAACGTTACCTTTGATTGCTCTCGTTCCGGGCCCTGTGTTGCGTGCCTCCTCTCCGAAAAGGTATCTGTTCGTTAGGTCTTTAAATCGAGATAAACTAAATACTGGTGTTCTTATTCGTTCCCGTTCAGTTGGCATGCGTTGTTTTTTTGGGTTGAATTATCTAGAAATTATGATCTAGCTTGTTGGAGTTCTAGATTATTGGTTGTGATGAAACAGTGAAGCTTTTCAATATCATTTTTGTTATAGCGAGTAGCAACGAGATTATTGCAAATGCATGTCAGATTTTTCATCATGCAGCAATGAACTTCCAGTTTTCAATGCATTAGAATTTGATAATGATAGGCCCCTTGCGTTCTCGTTCTCTTTGGCCAAAATTTTATGTTGTGCTTTCTTTGGAAATTTGTTCACGCTGGGTATACATTGTTTAATTTGTAACAAATGCACTTACCAAGTTCACAAAACAGAAAAAGACAAGATCGACACCAAAGTTCCATGACTTTGGATCCTCTAACCTATTTTCCCATATCCTTTTTGGAAAATCATTCTCTTTTTGGTTAGTTGGATTTGAACATGGATACTGTGAGATCCCACGTCGGTTGAAGAGGGAAACAAAGAATTCTTTATAAGGGTGTAGAAATCTCTCTCTAGTAGATACGTTTTAAAACCTTGAGGGAAGCCCAAAGAAGACAACATTTGCTAGCTGTAGACTTGAAATTTTACAAATGGTATTGAGCTAGATACCGGGCGGTGTGCCAACAGGGACGATGGGCCTCCAAGGGGGGTGAATTGTGAGATCTTACATCCAATGGAAGAGGAACGAAGGGTGTGGAAACATCTCCCTAGTAGACGCGTTTTAAAACCTTGAGAGTAAGTCCAAAGAAGACAATATTAGCGAGCGGTGTGTTTGGGTGGTTACAGATACTATGATTTTATAGCCACAGGGACAGACAAGGTTGACTCTGTAGTTAATATTTGGATAGTGCTAGGCTTTCAGTTCTTAATGTGTTAGGATTGGGAACGGTAGTCCGTTGTATATTTTCCATCTTTAAATCCAATGTTTCCTGTTTAATGGTAGCTTTTGCTTTGCTTGTTTGTATAAAATTTAATGTAGAAGTAATTTTTCATTATCTTCTTCTTTTTGGTCACATAGAAGGATGAAAATTATGGCTGCAGTGAGACTGGGTATCGTATTCCCCTGAAATGTGTGGAAGTCAAAGACACATCAAAAGTTTCCAATGAGAAAAAATCTCATGATGGTCGCTCAACACTTGAAATGTCTTATGAGCACAAGCTTGTGAACCATTTGCAGAGTGATGCAAGCGATCATGCTTCATCAGTTGCACACAGACATCAACGGGATGGTTCTATCTCTGGAACAGTTGGTTCCCAGGATTACATCATTTACAGAAGCTGTATTCCATCAGTTAATGATGAAAAGTTGTCTGTACTTGGGTTTGAGGTATGCCATTTATCTTAGCTGCTCTATTTCAAAGGGTTTAGTTTATTGCAATTAATGGTTTAATGGCCGTTGCATGCCTTATTATCTTCTCTCAAATTTGCTTTACTCTGTATAATTGATTTTGAATCCGAAAGTATTCATCAACTAAATAGCTATGCAGTCATGCTACTATGGTTACTGCTGTTCTTATTTATTTTAATTGTTGTCTGTAACTTTTACTTGCCACAAGATCCTATTTACTTCTTAAGTAGAGAATGCATCAATGGGAGGTAGACAGTTAAGGCACCTCATGAGACCTGTTCATCTTTTACAGAACCAAAATTCGATGGCTAATCAGTGTAATCTATGGATTTTCTTCAGCGGTTCTGTTGTTAAGATGATAGCTAACATCATATCTAGTCAGATTTGCAGTACTATGGAGGTTCATTCTTTGTGCTACTTTGTTGTCAATCTATCTTTTTTCTTCTTCACATCTTGTATTTTGTAAAGTTAGATGGAAGAATAATTGTTCCTCTTCGTATTAAAATCAAAATATTGTTAATTAAGTCATAATTCCATTGTTCATCACCGAACAGATAATATAGATAAATATTTGAGCTACTTTGAAACTGTGCTTTAAATACCGTCTTCTATTTTTCAAAACATTTAATGGGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTTCTCATGATAGTGTGGAAACCTCTCCCTCGCGTTTTAGAATCTTGAAGGGAAGCTCGGAAGGGAAAGCCCAAAGAAAATAATATCTGTTAGCGGTGAGCTTTGACTGTTATAAATGGTATCAGAGCCAGGCACACCGGCGGTGTGCTAGCGAGGATGCTGGGCCCCCAATGGGGTGGATTGTGAGATCCACGTCGGTTGAAGAAGGGAACAAAGCATTCCTTATAAGGGTGTGAAAACATCTCTCTAACAGACGCGTTTTAAAACCTTGAGGGGAAGCTCGAAAGGGACTACTAGCAGTGGGCTTAGGCTGTTACATTCGAATAGTGCCGAATAGGTGAAAACTATTATCCTTTGGAGAGAAAGATAGATGCTTTCCAACTGGTTGTTTAATAGAGCATGCTACTTTTATCTTGATTGGATTCATTTCATTTTGTGTACTGTTGTGGACAGGGCATTGTGCTAGGCTTGCTGCTTATAAGCGGTTCAGTTGTGTACTTCAGAAGGAAGCGAAGTGTTTCAACGGCTGGTTTTGCATCTGGCAGGGTGCAGTCAAATTCCAGGTTCTAGTACATCACTCATTTTTTGTTACAATTATCCACCAATTCTACACATTCAAATTATTCAAAGAATTAGGTTCATTTGAACAACTATTTCCTTTCCTTTTTCTCTTTTCTAAAAGCTATACCAAAATTAGAATACAAATAAATAGCCCAAGCCCATATATATACACATAGAGAGAGGGAGATATGTACAATCCAGATGTTTTTTATTTTGGATTATTGAAATTAGAATACAAATAAGAGGCATGTTGTTTGAAGGGTAACGTTGAGAAGAACCAAGAGGCATGAGTTCCTCTCAAACTGGAGGAAGCCTAAGCCTAAGCCTAAGGTCAGGCGGGTGGCCGTCCTTTTACTCCCATTCGCCTGCAAACCAAACCCAACAAATATTAACTCGCTTAAAATCAATAGATATATGCTAGGAAAAAATTTTCACACCCTCATAAAAAATGTTTCATTCTCTTCTCAAAATGGCGTGGGATCTCACAAAAGTCCAGTAAGAAATTTGAACACAACTCGATATCATTGCTATGTTAAAGTTGATCTTCGAAAAAATTCACCTGTTATGAATTGGGTCGGGTCCTTTAGGGACTTTAACTTTGCTCATGAAGTTAAGCTCCTTGGCTTGCTTCATATGGCTTCCCTCAAACTCAGACCTAGCTGCCGGCCAGCTTGTTGTTTTCGCCATCGACCGTTCTCCGCTGTCGGGCATGCCAACGATTAAAAGCCATACAAACATCCCAACAGCCACAGCTCCAAGCAAGACCTTGAAGTAAGAAAATGAGCAACAACTACCTTCACTTCTCATAAATATATATATATATATATATACTTCTGTCTATGTACGTCGAGAGAGATTAGTTAACTTTACGACTCGAGAGGTAAAGATGACAACGGCGATAGGTCGAAGTATGTTATCTTAAGTAGCGTCAAGCAATGAGAAGAAGAAGAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGGAGAAGGAGAGGAGTTTGTTTAGAAAAGGGGAGTGCATGTTTAATTAGGGAGTTGTCTTTTTTTTCTTTATAGGGTTGGTGGATTCTGTTGCACTTTTCTCAAACCCTGCCTTGCCTGTTTGTTTATTATTGACACACACACACACACCATTATATTCTAACATGTCATATTAATTTACATCTAATATTATTCCTATTACATTAACTCCAATGCTTGTGTGTGAAGAA

mRNA sequence

GAGGTTCGCTCAGAGGTGAATAATGTGTTGGAATTTTTCGTTGCATCATTTTCTTCTCCTTCTCTTCTGTTTCTCTGCTTCACTTGACGCTCAACAGAATTTAGGCAGAATCGGGAGAAACGAAGAAACTGAGATAGGGTTTGGGCGCAGAGCTCTGTTGAGTTTCAAAGAGTCTCCTCATGGAAGTAACGTTACCTTTGATTGCTCTCGTTCCGGGCCCTGTGTTGCGTGCCTCCTCTCCGAAAAGAAGGATGAAAATTATGGCTGCAGTGAGACTGGGTATCGTATTCCCCTGAAATGTGTGGAAGTCAAAGACACATCAAAAGTTTCCAATGAGAAAAAATCTCATGATGGTCGCTCAACACTTGAAATGTCTTATGAGCACAAGCTTGTGAACCATTTGCAGAGTGATGCAAGCGATCATGCTTCATCAGTTGCACACAGACATCAACGGGATGGTTCTATCTCTGGAACAGTTGGTTCCCAGGATTACATCATTTACAGAAGCTGTATTCCATCAGTTAATGATGAAAAGTTGTCTGTACTTGGGTTTGAGGGCATTGTGCTAGGCTTGCTGCTTATAAGCGGTTCAGTTGTGTACTTCAGAAGGAAGCGAAGTGTTTCAACGGCTGGTTTTGCATCTGGCAGGGTGCAGTCAAATTCCAGGTTCTAGTACATCACTCATTTTTTGTTACAATTATCCACCAATTCTACACATTCAAATTATTCAAAGAATTAGGTTCATTTGAACAACTATTTCCTTTCCTTTTTCTCTTTTCTAAAAGCTATACCAAAATTAGAATACAAATAAATAGCCCAAGCCCATATATATACACATAGAGAGAGGGAGATATGTACAATCCAGATGTTTTTTATTTTGGATTATTGAAATTAGAATACAAATAAGAGGCATGTTGTTTGAAGGGTAACGTTGAGAAGAACCAAGAGGCATGAGTTCCTCTCAAACTGGAGGAAGCCTAAGCCTAAGCCTAAGGTCAGGCGGGTGGCCGTCCTTTTACTCCCATTCGCCTGCAAACCAAACCCAACAAATATTAACTCGCTTAAAATCAATAGATATATGCTAGGAAAAAATTTTCACACCCTCATAAAAAATGTTTCATTCTCTTCTCAAAATGGCGTGGGATCTCACAAAAGTCCAGTAAGAAATTTGAACACAACTCGATATCATTGCTATGTTAAAGTTGATCTTCGAAAAAATTCACCTGTTATGAATTGGGTCGGGTCCTTTAGGGACTTTAACTTTGCTCATGAAGTTAAGCTCCTTGGCTTGCTTCATATGGCTTCCCTCAAACTCAGACCTAGCTGCCGGCCAGCTTGTTGTTTTCGCCATCGACCGTTCTCCGCTGTCGGGCATGCCAACGATTAAAAGCCATACAAACATCCCAACAGCCACAGCTCCAAGCAAGACCTTGAAGTAAGAAAATGAGCAACAACTACCTTCACTTCTCATAAATATATATATATATATATATACTTCTGTCTATGTACGTCGAGAGAGATTAGTTAACTTTACGACTCGAGAGGTAAAGATGACAACGGCGATAGGTCGAAGTATGTTATCTTAAGTAGCGTCAAGCAATGAGAAGAAGAAGAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGGAGAAGGAGAGGAGTTTGTTTAGAAAAGGGGAGTGCATGTTTAATTAGGGAGTTGTCTTTTTTTTCTTTATAGGGTTGGTGGATTCTGTTGCACTTTTCTCAAACCCTGCCTTGCCTGTTTGTTTATTATTGACACACACACACACACCATTATATTCTAACATGTCATATTAATTTACATCTAATATTATTCCTATTACATTAACTCCAATGCTTGTGTGTGAAGAA

Coding sequence (CDS)

ATGTGTTGGAATTTTTCGTTGCATCATTTTCTTCTCCTTCTCTTCTGTTTCTCTGCTTCACTTGACGCTCAACAGAATTTAGGCAGAATCGGGAGAAACGAAGAAACTGAGATAGGGTTTGGGCGCAGAGCTCTGTTGAGTTTCAAAGAGTCTCCTCATGGAAGTAACGTTACCTTTGATTGCTCTCGTTCCGGGCCCTGTGTTGCGTGCCTCCTCTCCGAAAAGAAGGATGAAAATTATGGCTGCAGTGAGACTGGGTATCGTATTCCCCTGAAATGTGTGGAAGTCAAAGACACATCAAAAGTTTCCAATGAGAAAAAATCTCATGATGGTCGCTCAACACTTGAAATGTCTTATGAGCACAAGCTTGTGAACCATTTGCAGAGTGATGCAAGCGATCATGCTTCATCAGTTGCACACAGACATCAACGGGATGGTTCTATCTCTGGAACAGTTGGTTCCCAGGATTACATCATTTACAGAAGCTGTATTCCATCAGTTAATGATGAAAAGTTGTCTGTACTTGGGTTTGAGGGCATTGTGCTAGGCTTGCTGCTTATAAGCGGTTCAGTTGTGTACTTCAGAAGGAAGCGAAGTGTTTCAACGGCTGGTTTTGCATCTGGCAGGGTGCAGTCAAATTCCAGGTTCTAG

Homology

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BLAST of CmoCh04G003310 vs. TrEMBL
Match: A0A0A0KVR8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604010 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.2e-85
Identity = 170/213 (79.81%), Postives = 184/213 (86.38%), Query Frame = 1


Query: 5   FSLHHFLLLLFCFSASLDAQ-QNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSR 64
           FS   FLLLLF FSASL AQ QN  R+G +EE EIGFGRRALLSFKE+P GSNVTF+CSR
Sbjct: 5   FSFLPFLLLLFTFSASLHAQSQNTDRVGGDEEIEIGFGRRALLSFKETPQGSNVTFECSR 64

Query: 65  SGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKL 124
           SGPCVACL SEK DE Y CSETGYRIPLKCVE+KDTSKVSN KKSH+GRS L++SYEHK+
Sbjct: 65  SGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDTSKVSNGKKSHNGRSMLDISYEHKV 124

Query: 125 VNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLG 184
           V     DAS +ASS+AHR+ RDGS+S T GSQ YI YRSCIPSVN+EKLSVLGFEGIVL 
Sbjct: 125 V---PDDASGNASSIAHRNLRDGSVSSTDGSQSYITYRSCIPSVNEEKLSVLGFEGIVLC 184

Query: 185 LLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217
           LLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 185 LLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 214

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BLAST of CmoCh04G003310 vs. TrEMBL
Match: M5XNF3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011511mg PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.0e-50
Identity = 119/205 (58.05%), Postives = 139/205 (67.80%), Query Frame = 1


Query: 12  LLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVACL 71
           LLLF F A   A  ++G      +   G GRRALLS KE+P GSN TF+CS +GPCV CL
Sbjct: 9   LLLFFFVAF--ALLSVGHATIQGDESEGIGRRALLSLKETPRGSNTTFECSPAGPCVPCL 68

Query: 72  LSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQSDA 131
            SEKKDE Y CSETGYRIPLKCVE K + K    K S   RSTLE+ Y +    H   +A
Sbjct: 69  YSEKKDEKYRCSETGYRIPLKCVETKRSLKDEKAKGSQKSRSTLEI-YHNDAELH---NA 128

Query: 132 SDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLISGSV 191
            +  +SV HR   D S +   G Q YI YRSCIP+V++EKLSVLGFE IVL  LLISGSV
Sbjct: 129 EELGTSVKHRSLLDDSATLEDGPQAYITYRSCIPAVSEEKLSVLGFEMIVLFFLLISGSV 188

Query: 192 VYFRRKRSVSTAGFASGRVQSNSRF 217
           VYFRRK++VS  GF +GR+QSNSRF
Sbjct: 189 VYFRRKQTVSMTGFGAGRIQSNSRF 207

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BLAST of CmoCh04G003310 vs. TrEMBL
Match: A0A067JBW4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21738 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.9e-49
Identity = 113/205 (55.12%), Postives = 137/205 (66.83%), Query Frame = 1


Query: 12  LLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVACL 71
           L+LF  SA+L +  ++     ++ T  G G R LL FKE P GSN+TFDCS SG CV C 
Sbjct: 12  LVLFLVSAALLSLSSIN--ASDQTTNGGSGSRVLLVFKEKPEGSNLTFDCSPSGACVPCQ 71

Query: 72  LSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQSDA 131
            SEK DE Y CSETGYRIPLKC+E KD  K  N+KKS   RS +E+S E+   + +  D 
Sbjct: 72  YSEKTDEKYRCSETGYRIPLKCIETKDNIKNGNDKKSQKTRSVIEISNENANPHAMLHD- 131

Query: 132 SDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLISGSV 191
              A+S   R   D S +   GSQ YI YRSCIP VN+EKLSVLGFEGI+L L LISGSV
Sbjct: 132 ---AASNEQRSLLDDSSTLEDGSQAYITYRSCIPPVNEEKLSVLGFEGIILCLFLISGSV 191

Query: 192 VYFRRKRSVSTAGFASGRVQSNSRF 217
           VYFRRK++V+ +G   GR+Q NSRF
Sbjct: 192 VYFRRKQTVTMSGVGGGRIQMNSRF 210

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BLAST of CmoCh04G003310 vs. TrEMBL
Match: A0A067GST4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028438mg PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.9e-49
Identity = 110/207 (53.14%), Postives = 138/207 (66.67%), Query Frame = 1


Query: 10  FLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVA 69
           F+ LLF  +      Q       ++  +   G+R  LSFKE+P GSN TF+CS SGPCV 
Sbjct: 6   FIFLLFIITQLSSPHQASTYQPESKSADRSVGQRHFLSFKETPSGSNRTFECSPSGPCVR 65

Query: 70  CLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQS 129
           CL SEK DE Y CSETGYRIPLKCVE +D S V NEKK+   R  LE+S + +  + +  
Sbjct: 66  CLYSEKIDEKYRCSETGYRIPLKCVESEDVSNVENEKKT---RGALEISTDSEKPHVILH 125

Query: 130 DASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLISG 189
           DA +  +S+ HR   + S +    SQ YI YRSCIP+VN+EKLSVLGFEGIV  LLLISG
Sbjct: 126 DAVELTTSIKHRSLLEDSSTSKGKSQAYITYRSCIPAVNEEKLSVLGFEGIVFCLLLISG 185

Query: 190 SVVYFRRKRSVSTAGFASGRVQSNSRF 217
           S VY RRKR+V+ +G  +GR+Q+NSRF
Sbjct: 186 SAVYLRRKRTVTMSGIGTGRIQANSRF 209

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BLAST of CmoCh04G003310 vs. TrEMBL
Match: V7CJS1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G078700g PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.9e-49
Identity = 115/220 (52.27%), Postives = 147/220 (66.82%), Query Frame = 1


Query: 4   NFSLHHFLLLLFCFSASLDAQQNLGRIGR--NEETEIG--FGRRALLSFKESPHGSNVTF 63
           NF+   FLL LF F  S+ A   LG+      EET+ G   GRR LLSFKE P G+N+TF
Sbjct: 2   NFANSQFLLPLFFFFFSISAFPALGQQTDWDREETQHGNGVGRRVLLSFKEKPSGTNITF 61

Query: 64  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEM-- 123
           +CS SGPCV CL SEK D  Y CSETGYRIP KCVE+KD++K + + KS  GRS+LE+  
Sbjct: 62  ECSPSGPCVPCLYSEKGDSKYRCSETGYRIPFKCVEIKDSTKDAKKTKSRKGRSSLEIPD 121

Query: 124 -SYEHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLG 183
            + E + V+H+   A     S + R   D S S    SQ YI YRSCI  VN+EKLSVL 
Sbjct: 122 GTAESQKVSHV---AGQSTHSQSDRRLADDSSSSDNSSQAYITYRSCITPVNEEKLSVLN 181

Query: 184 FEGIVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217
           FEG+V+ LLLISGS++Y R++++ S +G+ +GR Q+NSRF
Sbjct: 182 FEGVVIFLLLISGSIMYLRKRKAASMSGYVAGRGQNNSRF 218

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BLAST of CmoCh04G003310 vs. TAIR10
Match: AT1G69980.1 (AT1G69980.1 unknown protein)

HSP 1 Score: 155.6 bits (392), Expect = 3.5e-38
Identity = 93/215 (43.26%), Postives = 129/215 (60.00%), Query Frame = 1


Query: 6   SLHHFLLLLFCFSASLDAQQNLGRIGRNEETEI-GFGRRALLSFKESPHGSNVTFDCSRS 65
           SL   +  +F +++S+ +         + + EI   GRR LL FKE+P GSN+TF CS S
Sbjct: 7   SLFLVIFFIFIYASSIPSSILARAHEHDGDEEIRSVGRRFLLGFKETPKGSNITFACSPS 66

Query: 66  GPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLV 125
           GPCV+C  SEK+ E Y CSETGYRIP KC EV++  +V   KK+ +  +           
Sbjct: 67  GPCVSCNSSEKRKEKYRCSETGYRIPFKCKEVRE--EVDAHKKNGEEET----------- 126

Query: 126 NHLQSDASDHASSVAHRHQR--DGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVL 185
              Q+D S++    A       D S +  V SQ Y  YRSC+PS ++EKLSVLGFE I+L
Sbjct: 127 ---QNDQSNNNDEEAKTRNLLDDSSPATKVKSQSYKTYRSCVPSADEEKLSVLGFESIML 186

Query: 186 GLLLISGSVVYFRRKRSVSTAGF-ASGRVQSNSRF 217
           GL L+SG+ +Y R++++V   G  +SGR+Q NSRF
Sbjct: 187 GLFLLSGAAIYIRKRQTVPMLGVSSSGRLQGNSRF 205

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BLAST of CmoCh04G003310 vs. NCBI nr
Match: gi|449434859|ref|XP_004135213.1| (PREDICTED: uncharacterized protein LOC101207563 [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 4.6e-85
Identity = 170/213 (79.81%), Postives = 184/213 (86.38%), Query Frame = 1


Query: 5   FSLHHFLLLLFCFSASLDAQ-QNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSR 64
           FS   FLLLLF FSASL AQ QN  R+G +EE EIGFGRRALLSFKE+P GSNVTF+CSR
Sbjct: 5   FSFLPFLLLLFTFSASLHAQSQNTDRVGGDEEIEIGFGRRALLSFKETPQGSNVTFECSR 64

Query: 65  SGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKL 124
           SGPCVACL SEK DE Y CSETGYRIPLKCVE+KDTSKVSN KKSH+GRS L++SYEHK+
Sbjct: 65  SGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDTSKVSNGKKSHNGRSMLDISYEHKV 124

Query: 125 VNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLG 184
           V     DAS +ASS+AHR+ RDGS+S T GSQ YI YRSCIPSVN+EKLSVLGFEGIVL 
Sbjct: 125 V---PDDASGNASSIAHRNLRDGSVSSTDGSQSYITYRSCIPSVNEEKLSVLGFEGIVLC 184

Query: 185 LLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217
           LLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 185 LLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 214

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BLAST of CmoCh04G003310 vs. NCBI nr
Match: gi|659090936|ref|XP_008446282.1| (PREDICTED: uncharacterized protein LOC103489059 [Cucumis melo])

HSP 1 Score: 320.5 bits (820), Expect = 2.3e-84
Identity = 168/217 (77.42%), Postives = 181/217 (83.41%), Query Frame = 1


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQQ-NLGRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60
           M W FS   FLLLLF FSASL AQ  N  R+  +EE  IGFGRRALLSFKE+P GSNVTF
Sbjct: 1   MYWKFSFLPFLLLLFTFSASLHAQSLNTDRVSGDEEIGIGFGRRALLSFKETPQGSNVTF 60

Query: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120
           +CSRSGPCVACL SEK DE Y CSETGYRIPLKCVE+KDTSKVSNEKKSH+GRS L++SY
Sbjct: 61  ECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDTSKVSNEKKSHNGRSMLDISY 120

Query: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG 180
           EHK+V     DAS HASS AHR+ RDGS+S T G Q YI YRSCIPSVN+EKLSVLGFEG
Sbjct: 121 EHKVV---PDDASGHASSTAHRNLRDGSVSSTDGPQSYITYRSCIPSVNEEKLSVLGFEG 180

Query: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217
           IVL LLLISGSVVYFRRKRS+S AGFASGRVQSNSRF
Sbjct: 181 IVLCLLLISGSVVYFRRKRSISMAGFASGRVQSNSRF 214

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BLAST of CmoCh04G003310 vs. NCBI nr
Match: gi|596287730|ref|XP_007225822.1| (hypothetical protein PRUPE_ppa011511mg [Prunus persica])

HSP 1 Score: 207.2 bits (526), Expect = 2.8e-50
Identity = 119/205 (58.05%), Postives = 139/205 (67.80%), Query Frame = 1


Query: 12  LLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVACL 71
           LLLF F A   A  ++G      +   G GRRALLS KE+P GSN TF+CS +GPCV CL
Sbjct: 9   LLLFFFVAF--ALLSVGHATIQGDESEGIGRRALLSLKETPRGSNTTFECSPAGPCVPCL 68

Query: 72  LSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQSDA 131
            SEKKDE Y CSETGYRIPLKCVE K + K    K S   RSTLE+ Y +    H   +A
Sbjct: 69  YSEKKDEKYRCSETGYRIPLKCVETKRSLKDEKAKGSQKSRSTLEI-YHNDAELH---NA 128

Query: 132 SDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLISGSV 191
            +  +SV HR   D S +   G Q YI YRSCIP+V++EKLSVLGFE IVL  LLISGSV
Sbjct: 129 EELGTSVKHRSLLDDSATLEDGPQAYITYRSCIPAVSEEKLSVLGFEMIVLFFLLISGSV 188

Query: 192 VYFRRKRSVSTAGFASGRVQSNSRF 217
           VYFRRK++VS  GF +GR+QSNSRF
Sbjct: 189 VYFRRKQTVSMTGFGAGRIQSNSRF 207

[Close]

BLAST of CmoCh04G003310 vs. NCBI nr
Match: gi|645229489|ref|XP_008221490.1| (PREDICTED: uncharacterized protein LOC103321462 [Prunus mume])

HSP 1 Score: 206.1 bits (523), Expect = 6.3e-50
Identity = 116/207 (56.04%), Postives = 138/207 (66.67%), Query Frame = 1


Query: 10  FLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVA 69
           FLLL F  + +L    ++G      +   G GRRALLS KE+P GSN TF+CS +GPCV 
Sbjct: 8   FLLLFFFLAFAL---LSVGHATIQSDESEGIGRRALLSLKETPRGSNTTFECSPAGPCVP 67

Query: 70  CLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQS 129
           CL SEKKDE Y CSETGYRIPLKCVE K +SK    K S   RSTL + +         +
Sbjct: 68  CLYSEKKDEKYRCSETGYRIPLKCVETKRSSKDEKAKGSQKSRSTLGIYH---------N 127

Query: 130 DASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLISG 189
           DA +  +SV HR   D S +   G Q YI YRSCIP+V++EKLSVLGFE IVL  LLISG
Sbjct: 128 DAEELGTSVKHRSLLDDSATLEDGPQAYITYRSCIPAVSEEKLSVLGFEVIVLFFLLISG 187

Query: 190 SVVYFRRKRSVSTAGFASGRVQSNSRF 217
           SVVY RRK++VS  GF +GR+QSNSRF
Sbjct: 188 SVVYLRRKQTVSMTGFGAGRIQSNSRF 202

[Close]

BLAST of CmoCh04G003310 vs. NCBI nr
Match: gi|658009503|ref|XP_008339965.1| (PREDICTED: uncharacterized protein LOC103402955 [Malus domestica])

HSP 1 Score: 203.8 bits (517), Expect = 3.1e-49
Identity = 121/208 (58.17%), Postives = 146/208 (70.19%), Query Frame = 1


Query: 10  FLLLLFCFSASLDAQQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVA 69
           FLLLLF  + +L +  +   IG +EE+  G GRRALLS KE+PHGSN T++CS +GPCV 
Sbjct: 8   FLLLLFSIAFNLLSLAH-ATIG-SEESGGGIGRRALLSLKETPHGSNATYECSPAGPCVP 67

Query: 70  CLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQS 129
           CL  EKKDE Y CSETGYRIPLKCVE+K  SK +  K +   RS LE+S+     N  +S
Sbjct: 68  CLYPEKKDEKYRCSETGYRIPLKCVEMKHGSKEAKMKGAQKSRSALEISH-----NIEES 127

Query: 130 DASDHASS-VAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLIS 189
           D +D   + V HR   D S   T   Q YI YRSCIP+VN+EKLSVLGFE IVL LLLIS
Sbjct: 128 DKADBLGTYVKHRSLLDDS--STQEPQAYITYRSCIPAVNEEKLSVLGFEVIVLFLLLIS 187

Query: 190 GSVVYFRRKRSVSTAGFASGRVQSNSRF 217
           GS+VYFRRK++ STAGF   R+Q+NSRF
Sbjct: 188 GSLVYFRRKQTTSTAGFV--RIQNNSRF 204

The following BLAST results are available for this feature:

BLAST of CmoCh04G003310 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G003310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVR8_CUCSA	3.2e-85	79.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604010 PE=4 SV=1	[more]
M5XNF3_PRUPE	2.0e-50	58.05	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011511mg PE=4 SV=1	[more]
A0A067JBW4_JATCU	4.9e-49	55.12	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21738 PE=4 SV=1	[more]
A0A067GST4_CITSI	4.9e-49	53.14	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028438mg PE=4 SV=1	[more]
V7CJS1_PHAVU	4.9e-49	52.27	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G078700g PE=4 SV=1	[more]

BLAST of CmoCh04G003310 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69980.1	3.5e-38	43.26	unknown protein	[more]

BLAST of CmoCh04G003310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434859\|ref\|XP_004135213.1\|	4.6e-85	79.81	PREDICTED: uncharacterized protein LOC101207563 [Cucumis sativus]	[more]
gi\|659090936\|ref\|XP_008446282.1\|	2.3e-84	77.42	PREDICTED: uncharacterized protein LOC103489059 [Cucumis melo]	[more]
gi\|596287730\|ref\|XP_007225822.1\|	2.8e-50	58.05	hypothetical protein PRUPE_ppa011511mg [Prunus persica]	[more]
gi\|645229489\|ref\|XP_008221490.1\|	6.3e-50	56.04	PREDICTED: uncharacterized protein LOC103321462 [Prunus mume]	[more]
gi\|658009503\|ref\|XP_008339965.1\|	3.1e-49	58.17	PREDICTED: uncharacterized protein LOC103402955 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G003310.1	CmoCh04G003310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36336	FAMILY NOT NAMED	coord: 7..216 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G003310	Cucsa.285610	Cucumber (Gy14) v1	cgycmoB0798
CmoCh04G003310	CmaCh04G003150	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G003310	CmaCh04G016090	Cucurbita maxima (Rimu)	cmacmoB732
CmoCh04G003310	Cla010131	Watermelon (97103) v1	cmowmB700
CmoCh04G003310	Csa5G604010	Cucumber (Chinese Long) v2	cmocuB718
CmoCh04G003310	MELO3C012041	Melon (DHL92) v3.5.1	cmomeB647
CmoCh04G003310	ClCG05G024860	Watermelon (Charleston Gray)	cmowcgB661
CmoCh04G003310	CSPI05G23160	Wild cucumber (PI 183967)	cmocpiB726
CmoCh04G003310	Lsi04G004990	Bottle gourd (USVL1VR-Ls)	cmolsiB674
CmoCh04G003310	Cp4.1LG01g04020	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G003310	Cp4.1LG01g12850	Cucurbita pepo (Zucchini)	cmocpeB678
CmoCh04G003310	MELO3C012041.2	Melon (DHL92) v3.6.1	cmomedB737
CmoCh04G003310	CsaV3_5G032050	Cucumber (Chinese Long) v3	cmocucB0851
CmoCh04G003310	Cla97C05G106970	Watermelon (97103) v2	cmowmbB736
CmoCh04G003310	Bhi07G001336	Wax gourd	cmowgoB0907
CmoCh04G003310	CsGy5G022640	Cucumber (Gy14) v2	cgybcmoB630
CmoCh04G003310	Carg01749	Silver-seed gourd	carcmoB1140
CmoCh04G003310	Carg07994	Silver-seed gourd	carcmoB0514

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G003310	CmoCh04G016870	Cucurbita moschata (Rifu)	cmocmoB465

The following block(s) are covering this gene:

None