Carg07994 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07994
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Mediator of DNA damage checkpoint protein 1
Location	Cucurbita_argyrosperma_scaffold_050 : 83183 .. 86364 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTTGGAATTTTTCGTTGCATCATTTTCTTCTCCTTCTCTTCTGTTTCTCTGCTTCACTTGACGCTCAATTGCAGAATTTGTAAGCTCTAATTTTCTACGTTATGTGTTCTTATTGATCATTGTGTTATTTATTGATCTGATCTAATCTGATCTATTGGAATTCCATGGCGAATTGTTGCGTTCGTTCTTAATGTCAGAGGCAGAATCAGGAGAAACGAAGAAACTGAGATAGGGTTTGGGCGCAGAGCTCTGTTGAGTTTCAAAGAGTCTCCTCATGGAAGTAACGTTACCTTTGATTGCTCTCGTTCCGGGCCCTGTGTTGCGTGCCTCCTCTCCGAAAAGGTATCTGTTCGTTAGGTCTTTAAATCGAGATAAACTAAATGCTGGTGCTCTTATTCGTTCCCGTTCAGTTGGCATGCGTTGTTCTTTTGGGTTGAATTATCTAGAAATTATGATCTAGCTTGTTGGAGTTCTAGATTATTAGTTGTGATGAAACAGTGAAGCTTTTCAATATCATTTCCATCATAGCGAGTAGCAACGAGATATTGCAAATGCATGTCAGATCATGTAGCAATGAACTTCCAGTTTTCAATGCATTAGAATTTGATAATGATAGGCCCCTTGCGTTCTCGTTCTCTTTAGCCAAAATTTTATGTTGTGCTTTCTTTGAAAATTTGTTCACGCTGGGTATACATTGTTTAATTTGTAACAAATGCACTTACCAAGTTCACAAAACAGAAAAAGACAAGATCGACACCAAAGTTCCATGACTTTCGATCCTCTAACCTATTTTCCCATATCCTTTTTGGAAAATCCTTCTCTTTTTGGTTAGTTGTAGGTGAGCAGGGATTTGAACATGGATGGATACTGTGAGATCCCACGTCGGTTGAAGAGAGAAACAAAACATTCTTTATAAGAGTGTGGAAATCTCTCCCTAGTAGATGCGTTTTAAAACCTTGAGGAGTGTGGAAATCTCTCCCTAGTAGATGCGTTTTAAAACCTTGAGGGAAAACTCAAAGAAAACAATATTTACTAGCGGTGGACGTGAAATGTTACAAATGGTATCAGAGATAAGAGATAAGACACCGGGCGGTGTGCCAACAGGGATGATGGGCCTCCAAGGGGGGTGGATTGTGAGATCCCACATCAGATGGAGAGGGAAACAAAGCATTCCTTATAAGGTGCGTTTTAAAACTTTGAGAGTAAGTCCAAAGAAGACAATATTTGCAGACGGTCTGTTTGGAAGGTTACAAATACCACGATTTTATAGTCACAAGGAGGGACAGACAAGGTTGACTCTGTAGTTAATATTTGGATAGTGCTAGGCTTTCAGTTCTTAATGTGTTAGGATTGGGAATGGTAGTCCGTTGTATATTTTCAATCTTTAAATCCAATGCTTCATGTTTAATGGTAGCTTTTGCTTTGCTTTTTGGTATAAAATTTAATGTAGAAGTAATTTTTCATTATCTTCTTCTTTTTGGTCACATAGAAGGATGAAAATTATGGCTGCAGTGAGACTGGGTATCGTATTCCCCTGAAATGTGTGGAAGTCAAAGACACATCAAAAGTTTCCAATGAGAAAAAATCTCATGATGGTCGCTCAACACTTGAAATGTCTTATGAGCACAAGCTTGTGAACCATTTGCAGAGTGATGCAAGCGATCATGCTTCATCAGTTGCACACAGACATCAACGGGATGGTTCTATCTCTGGAACAGCTGGTTCCCAGGATTACATCATTTACAGAAGCTGTATTCCATCAGTTAATGATGAAAAGTTGTCTGTACTTGGGTTTGAGGTATGCCATTTATCTTAGCTGCTCTATTTCAAAGGGTTTAGTTTATTGCAATTAATGGTTTAATGGCCGTTGCATGCCTTATTATCTTCTCTCAAATTTGCTTTATCTGTATAATTGATTTTGAATCCGAAAGTATTCATCAACTAAATAGCTATGCAGTCATGCTACTATGGTTACTGCTGTTCTTATTTATTTTAATTGTTGTCTGTAACTTTTACTTGCCACAAGATCCTATTTACTTCTTAAGTAGAGAATGCATCAATGGGAGGTGGACAGTTAAGGCACCTCATGAGACCTGTTCATCTTTTACAGAACCAAAATTCGATGGCTAATCAGTGTAATCTATGGATTTTCTTCAGCGGTTCTGTTGTTAAGATGATAGCTAACATCATATCTAGTCAGATTTGCAGTACTAAGGAGGTTCATTCTTTGTGCTACTTTGTTGTCAATCTATCTTTTTTCTTCTTCACATCTTGTATTTTGTAAAGTTAGATGGAAGAATAATTGTTCCTCTTCATATTAAAATCAAAATATTGTTAATTAAGTCATAATTCCATTGTTCATCACCGAACAGATAATATAGATAAATATTTGAGCTACTTTGAAACTGTGCTTTAAATACCGTCTTCTATTTTTCAAAACATTTAATGGGAGATCCCACGTCGGTTGGAGAAGGGAACGAAGCATTTCTCATGAAAGTGTGGAAACCTCTCCCTCGCGTTTTAGAATCTTAAAGGGAAGCTCGGAAGGGAAAGCCCAAAGAAGATAATATCTGCTAACGGTGAGCTTTGACTGTTATAAATGGTATTAGAGCCAGGGCGAGGATGCTGGGCCCCCAATGGGGTGGATTGTGAGATCCACGTCGGTTGGAGAAGGGAACAAAGCATTCCTTATAAGGGTGTGAAAACATCTCTCTAACAGACACGTTTTAAAACCTTGAGGGGAAGCTCGGAAGGGACTACTAGCAGTGGGCTTAGGCTGTTACATTCGAATAGTGCCGAACAGGTGAAAACTAAACTATTATCCTTTGGAGAGAAAGATAGATGCTTTCCAACTGGTTGTTTAATAGAGCATGCTTCTTTTATCTTGATTGGATTCATTTCATTTTGTGTACTGTTGTGGACAGGGCATTGTGCTAGGCTTGCTGCTTATAAGCGGTTCAGTTGTGTACTTCAGAAGGAAGCGAAGTGTTTCAACGGCTGGTTTTGCATCTGGCAGGGTGCAGTCAAATTCCAGGTTCTAGTACATCACTCATTTTTTGTTACAATTATCCACCAATTCTACACATTCAAATTATACAAAGAATTAGGTTCATTTGAACAACTATTTCCTTTCCTTTTTCTCTTTTCTAAAAGCTATACCAAAATTAGAATACAAATA

mRNA sequence

ATGTGTTGGAATTTTTCGTTGCATCATTTTCTTCTCCTTCTCTTCTGTTTCTCTGCTTCACTTGACGCTCAATTGCAGAATTTAGGCAGAATCAGGAGAAACGAAGAAACTGAGATAGGGTTTGGGCGCAGAGCTCTGTTGAGTTTCAAAGAGTCTCCTCATGGAAGTAACGTTACCTTTGATTGCTCTCGTTCCGGGCCCTGTGTTGCGTGCCTCCTCTCCGAAAAGAAGGATGAAAATTATGGCTGCAGTGAGACTGGGTATCGTATTCCCCTGAAATGTGTGGAAGTCAAAGACACATCAAAAGTTTCCAATGAGAAAAAATCTCATGATGGTCGCTCAACACTTGAAATGTCTTATGAGCACAAGCTTGTGAACCATTTGCAGAGTGATGCAAGCGATCATGCTTCATCAGTTGCACACAGACATCAACGGGATGGTTCTATCTCTGGAACAGCTGGTTCCCAGGATTACATCATTTACAGAAGCTGTATTCCATCAGTTAATGATGAAAAGTTGTCTGTACTTGGGTTTGAGGGCATTGTGCTAGGCTTGCTGCTTATAAGCGGTTCAGTTGTGTACTTCAGAAGGAAGCGAAGTGTTTCAACGGCTGGTTTTGCATCTGGCAGGGTGCAGTCAAATTCCAGGTTCTAGTACATCACTCATTTTTTGTTACAATTATCCACCAATTCTACACATTCAAATTATACAAAGAATTAGGTTCATTTGAACAACTATTTCCTTTCCTTTTTCTCTTTTCTAAAAGCTATACCAAAATTAGAATACAAATA

Coding sequence (CDS)

ATGTGTTGGAATTTTTCGTTGCATCATTTTCTTCTCCTTCTCTTCTGTTTCTCTGCTTCACTTGACGCTCAATTGCAGAATTTAGGCAGAATCAGGAGAAACGAAGAAACTGAGATAGGGTTTGGGCGCAGAGCTCTGTTGAGTTTCAAAGAGTCTCCTCATGGAAGTAACGTTACCTTTGATTGCTCTCGTTCCGGGCCCTGTGTTGCGTGCCTCCTCTCCGAAAAGAAGGATGAAAATTATGGCTGCAGTGAGACTGGGTATCGTATTCCCCTGAAATGTGTGGAAGTCAAAGACACATCAAAAGTTTCCAATGAGAAAAAATCTCATGATGGTCGCTCAACACTTGAAATGTCTTATGAGCACAAGCTTGTGAACCATTTGCAGAGTGATGCAAGCGATCATGCTTCATCAGTTGCACACAGACATCAACGGGATGGTTCTATCTCTGGAACAGCTGGTTCCCAGGATTACATCATTTACAGAAGCTGTATTCCATCAGTTAATGATGAAAAGTTGTCTGTACTTGGGTTTGAGGGCATTGTGCTAGGCTTGCTGCTTATAAGCGGTTCAGTTGTGTACTTCAGAAGGAAGCGAAGTGTTTCAACGGCTGGTTTTGCATCTGGCAGGGTGCAGTCAAATTCCAGGTTCTAG

Protein sequence

MCWNFSLHHFLLLLFCFSASLDAQLQNLGRIRRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQSDASDHASSVAHRHQRDGSISGTAGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF

Homology

[Close]

BLAST of Carg07994 vs. NCBI nr
Match: XP_023518468.1 (uncharacterized protein LOC111781939 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427.6 bits (1098), Expect = 2.6e-116
Identity = 214/217 (98.62%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQLQNLGRIRRNEETEIGFGRRALLSFKESPHGSNVTF 60
           MCWNF LHHFLLLLFCFSASLDAQLQNLGRI RNEETEIGFGRRALLSFKESPHGSNVTF
Sbjct: 1   MCWNFWLHHFLLLLFCFSASLDAQLQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60

Query: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120
           DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY
Sbjct: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120

Query: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTAGSQDYIIYRSCIPSVNDEKLSVLGFEG 180
           EHKLVNHLQSDASDHASSVAHRHQRDGSISGT GSQDYIIYRSCIPSVNDEKLSVLGFEG
Sbjct: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG 180

Query: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 218
           IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217

[Close]

BLAST of Carg07994 vs. NCBI nr
Match: XP_022943147.1 (uncharacterized protein LOC111447964 isoform X3 [Cucurbita moschata])

HSP 1 Score: 424.5 bits (1090), Expect = 2.2e-115
Identity = 214/217 (98.62%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQLQNLGRIRRNEETEIGFGRRALLSFKESPHGSNVTF 60
           MCWNFSLHHFLLLLFCFSASLDAQ QNLGRI RNEETEIGFGRRALLSFKESPHGSNVTF
Sbjct: 1   MCWNFSLHHFLLLLFCFSASLDAQ-QNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60

Query: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120
           DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY
Sbjct: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120

Query: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTAGSQDYIIYRSCIPSVNDEKLSVLGFEG 180
           EHKLVNHLQSDASDHASSVAHRHQRDGSISGT GSQDYIIYRSCIPSVNDEKLSVLGFEG
Sbjct: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG 180

Query: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 218
           IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 216

[Close]

BLAST of Carg07994 vs. NCBI nr
Match: XP_022993067.1 (uncharacterized protein LOC111489192 isoform X1 [Cucurbita maxima])

HSP 1 Score: 417.2 bits (1071), Expect = 3.5e-113
Identity = 209/217 (96.31%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQLQNLGRIRRNEETEIGFGRRALLSFKESPHGSNVTF 60
           MCWNFSLHHFLLLLFCFSASLDAQ QNL RI RNEETEIGFGRRALLSFKESPHGSNVTF
Sbjct: 1   MCWNFSLHHFLLLLFCFSASLDAQWQNLDRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60

Query: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120
           DCSRSGPCVACLLSEKKDENYGCSETGYRI LKCVEVKDTSKVSNEK SHDGRSTLEMSY
Sbjct: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRISLKCVEVKDTSKVSNEKISHDGRSTLEMSY 120

Query: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTAGSQDYIIYRSCIPSVNDEKLSVLGFEG 180
           EHKLVNHLQSDASDHASSVAHRHQRDGSISGT GSQDYIIYRSCIPSVNDEKLSVLGFEG
Sbjct: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG 180

Query: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 218
           IV+G+LLISGSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 181 IVVGMLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 217

[Close]

BLAST of Carg07994 vs. NCBI nr
Match: XP_022993076.1 (uncharacterized protein LOC111489192 isoform X2 [Cucurbita maxima])

HSP 1 Score: 410.6 bits (1054), Expect = 3.3e-111
Identity = 208/217 (95.85%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQLQNLGRIRRNEETEIGFGRRALLSFKESPHGSNVTF 60
           MCWNFSLHHFLLLLFCFSASLDAQ QNL RI RNEETEIGFGRRALLSFKESPHGSNVTF
Sbjct: 1   MCWNFSLHHFLLLLFCFSASLDAQWQNLDRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60

Query: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120
           DCSRSGPCVACLLSE KDENYGCSETGYRI LKCVEVKDTSKVSNEK SHDGRSTLEMSY
Sbjct: 61  DCSRSGPCVACLLSE-KDENYGCSETGYRISLKCVEVKDTSKVSNEKISHDGRSTLEMSY 120

Query: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTAGSQDYIIYRSCIPSVNDEKLSVLGFEG 180
           EHKLVNHLQSDASDHASSVAHRHQRDGSISGT GSQDYIIYRSCIPSVNDEKLSVLGFEG
Sbjct: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEG 180

Query: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 218
           IV+G+LLISGSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 181 IVVGMLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 216

[Close]

BLAST of Carg07994 vs. NCBI nr
Match: XP_023518452.1 (uncharacterized protein LOC111781939 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.5 bits (1051), Expect = 7.3e-111
Identity = 214/253 (84.58%), Postives = 214/253 (84.58%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQLQNLGRIRRNEETEIGFGRRALLSFKESPHGSNVTF 60
           MCWNF LHHFLLLLFCFSASLDAQLQNLGRI RNEETEIGFGRRALLSFKESPHGSNVTF
Sbjct: 1   MCWNFWLHHFLLLLFCFSASLDAQLQNLGRIGRNEETEIGFGRRALLSFKESPHGSNVTF 60

Query: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120
           DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY
Sbjct: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120

Query: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTAGSQDYIIYRSCIPSVNDEKLSVLGF-- 180
           EHKLVNHLQSDASDHASSVAHRHQRDGSISGT GSQDYIIYRSCIPSVNDEKLSVLGF  
Sbjct: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTVGSQDYIIYRSCIPSVNDEKLSVLGFEN 180

Query: 181 ----------------------------------EGIVLGLLLISGSVVYFRRKRSVSTA 218
                                             EGIVLGLLLISGSVVYFRRKRSVSTA
Sbjct: 181 QNSMANQCNLWIFFSSSVVKMIANIISSQICSTKEGIVLGLLLISGSVVYFRRKRSVSTA 240

[Close]

BLAST of Carg07994 vs. TAIR10
Match: AT1G69980.1 (unknown protein)

HSP 1 Score: 149.4 bits (376), Expect = 2.5e-36
Identity = 86/213 (40.38%), Postives = 115/213 (53.99%), Query Frame = 0


Query: 6   SLHHFLLLLFCFSASLDAQLQNLGRIRRNEETEIGFGRRALLSFKESPHGSNVTFDCSRS 65
           SL   +  +F +++S+ + +         +E     GRR LL FKE+P GSN+TF CS S
Sbjct: 7   SLFLVIFFIFIYASSIPSSILARAHEHDGDEEIRSVGRRFLLGFKETPKGSNITFACSPS 66

Query: 66  GPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLV 125
           GPCV+C  SEK+ E Y CSETGYRIP KC EV++                          
Sbjct: 67  GPCVSCNSSEKRKEKYRCSETGYRIPFKCKEVREEVDAHKXXXXXXXXXXXXXXXXXXXX 126

Query: 126 NHLQSDASDHASSVAHRHQRDGSISGTAGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGL 185
                D S  A+ V               SQ Y  YRSC+PS ++EKLSVLGFE I+LGL
Sbjct: 127 XXXXXDDSSPATKVK--------------SQSYKTYRSCVPSADEEKLSVLGFESIMLGL 186

Query: 186 LLISGSVVYFRRKRSVSTAGF-ASGRVQSNSRF 218
            L+SG+ +Y R++++V   G  +SGR+Q NSRF
Sbjct: 187 FLLSGAAIYIRKRQTVPMLGVSSSGRLQGNSRF 205

[Close]

BLAST of Carg07994 vs. TrEMBL
Match: tr|A0A0A0KVR8|A0A0A0KVR8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604010 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 7.8e-85
Identity = 169/213 (79.34%), Postives = 183/213 (85.92%), Query Frame = 0


Query: 5   FSLHHFLLLLFCFSASLDAQLQNLGRIRRNEETEIGFGRRALLSFKESPHGSNVTFDCSR 64
           FS   FLLLLF FSASL AQ QN  R+  +EE EIGFGRRALLSFKE+P GSNVTF+CSR
Sbjct: 5   FSFLPFLLLLFTFSASLHAQSQNTDRVGGDEEIEIGFGRRALLSFKETPQGSNVTFECSR 64

Query: 65  SGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKL 124
           SGPCVACL SEK DE Y CSETGYRIPLKCVE+KDTSKVSN KKSH+GRS L++SYEHK+
Sbjct: 65  SGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDTSKVSNGKKSHNGRSMLDISYEHKV 124

Query: 125 VNHLQSDASDHASSVAHRHQRDGSISGTAGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLG 184
           V     DAS +ASS+AHR+ RDGS+S T GSQ YI YRSCIPSVN+EKLSVLGFEGIVL 
Sbjct: 125 V---PDDASGNASSIAHRNLRDGSVSSTDGSQSYITYRSCIPSVNEEKLSVLGFEGIVLC 184

Query: 185 LLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 218
           LLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF
Sbjct: 185 LLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 214

[Close]

BLAST of Carg07994 vs. TrEMBL
Match: tr|A0A1S3BEP2|A0A1S3BEP2_CUCME (uncharacterized protein LOC103489059 OS=Cucumis melo OX=3656 GN=LOC103489059 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.0e-84
Identity = 168/217 (77.42%), Postives = 181/217 (83.41%), Query Frame = 0


Query: 1   MCWNFSLHHFLLLLFCFSASLDAQLQNLGRIRRNEETEIGFGRRALLSFKESPHGSNVTF 60
           M W FS   FLLLLF FSASL AQ  N  R+  +EE  IGFGRRALLSFKE+P GSNVTF
Sbjct: 1   MYWKFSFLPFLLLLFTFSASLHAQSLNTDRVSGDEEIGIGFGRRALLSFKETPQGSNVTF 60

Query: 61  DCSRSGPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSY 120
           +CSRSGPCVACL SEK DE Y CSETGYRIPLKCVE+KDTSKVSNEKKSH+GRS L++SY
Sbjct: 61  ECSRSGPCVACLYSEKNDEKYRCSETGYRIPLKCVEIKDTSKVSNEKKSHNGRSMLDISY 120

Query: 121 EHKLVNHLQSDASDHASSVAHRHQRDGSISGTAGSQDYIIYRSCIPSVNDEKLSVLGFEG 180
           EHK+V     DAS HASS AHR+ RDGS+S T G Q YI YRSCIPSVN+EKLSVLGFEG
Sbjct: 121 EHKVV---PDDASGHASSTAHRNLRDGSVSSTDGPQSYITYRSCIPSVNEEKLSVLGFEG 180

Query: 181 IVLGLLLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 218
           IVL LLLISGSVVYFRRKRS+S AGFASGRVQSNSRF
Sbjct: 181 IVLCLLLISGSVVYFRRKRSISMAGFASGRVQSNSRF 214

[Close]

BLAST of Carg07994 vs. TrEMBL
Match: tr|A0A1Q3C9X8|A0A1Q3C9X8_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_20519 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.9e-51
Identity = 116/207 (56.04%), Postives = 148/207 (71.50%), Query Frame = 0


Query: 12  LLLFCFSASLDAQLQNLGRIRRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVAC 71
           +LLF  +    + LQ+    + N+    G GRR LLS+KE+P GSNVTF+CS SGPCV C
Sbjct: 10  ILLFYIAPVSASALQSSSLQKENK----GVGRRLLLSYKETPSGSNVTFECSPSGPCVLC 69

Query: 72  LLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSN-EKKSHDGRSTLEMSYEHKLVNHLQS 131
             SEK DE Y CSETGYRIPLKCVEV+D SK  + EKKS + RSTLE+S+ H+  + +  
Sbjct: 70  QYSEKNDEKYRCSETGYRIPLKCVEVEDGSKDDDKEKKSKNSRSTLEISHRHEKEHAMMH 129

Query: 132 DASDHASSVAHRHQRDGSISGTAGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLISG 191
            A +  +S+  R  +D S +    S  YI YRSCIPS+N+EKLSVLGFEG+V GLLL+SG
Sbjct: 130 AAGEITTSIEDRRLQDDSTTLEDRSHAYITYRSCIPSINEEKLSVLGFEGMVFGLLLVSG 189

Query: 192 SVVYFRRKRSVSTAGFASGRVQSNSRF 218
           SVVYFRRK++V+ +G A GR+Q+NSRF
Sbjct: 190 SVVYFRRKQTVAMSGVA-GRIQTNSRF 211

[Close]

BLAST of Carg07994 vs. TrEMBL
Match: tr|M5XNF3|M5XNF3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G262900 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.2e-50
Identity = 119/206 (57.77%), Postives = 139/206 (67.48%), Query Frame = 0


Query: 12  LLLFCFSASLDAQLQNLGRIRRNEETEIGFGRRALLSFKESPHGSNVTFDCSRSGPCVAC 71
           LLLF F A     L ++G      +   G GRRALLS KE+P GSN TF+CS +GPCV C
Sbjct: 9   LLLFFFVA---FALLSVGHATIQGDESEGIGRRALLSLKETPRGSNTTFECSPAGPCVPC 68

Query: 72  LLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLVNHLQSD 131
           L SEKKDE Y CSETGYRIPLKCVE K + K    K S   RSTLE+ Y +    H   +
Sbjct: 69  LYSEKKDEKYRCSETGYRIPLKCVETKRSLKDEKAKGSQKSRSTLEI-YHNDAELH---N 128

Query: 132 ASDHASSVAHRHQRDGSISGTAGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGLLLISGS 191
           A +  +SV HR   D S +   G Q YI YRSCIP+V++EKLSVLGFE IVL  LLISGS
Sbjct: 129 AEELGTSVKHRSLLDDSATLEDGPQAYITYRSCIPAVSEEKLSVLGFEMIVLFFLLISGS 188

Query: 192 VVYFRRKRSVSTAGFASGRVQSNSRF 218
           VVYFRRK++VS  GF +GR+QSNSRF
Sbjct: 189 VVYFRRKQTVSMTGFGAGRIQSNSRF 207

[Close]

BLAST of Carg07994 vs. TrEMBL
Match: tr|A0A2G5F2V4|A0A2G5F2V4_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00200389v1 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.4e-49
Identity = 112/212 (52.83%), Postives = 144/212 (67.92%), Query Frame = 0


Query: 12  LLLFCFSASLDAQLQ-----NLGRIRRNEETEIG-FGRRALLSFKESPHGSNVTFDCSRS 71
           L+LF F  +L   L      +L RI+R EE E+    RR+L SFKE+P GSN+TF CS S
Sbjct: 9   LILFFFFLTLVISLSQAFPISLPRIQRGEEVEVELIERRSLRSFKETPKGSNLTFKCSPS 68

Query: 72  GPCVACLLSEKKDENYGCSETGYRIPLKCVEVKDTSKVSNEKKSHDGRSTLEMSYEHKLV 131
           GPCV+CL SEK D+ Y CSETGY IPLKC+E+K  SK+ N+KK    RST+E++  H   
Sbjct: 69  GPCVSCLYSEKNDDKYRCSETGYHIPLKCLEIKSGSKLKNDKKPQKERSTMEIT--HAET 128

Query: 132 NHLQSDASDHASSVAHRHQRDGSISGTAGSQDYIIYRSCIPSVNDEKLSVLGFEGIVLGL 191
           + +  D  +  +SV H+   D S +  A  Q YI YRSCIP+V +EKLSVLGFEGI+ GL
Sbjct: 129 SPVLQDEKELITSVGHKRLLDDSSASEAEKQAYITYRSCIPAVFEEKLSVLGFEGIMFGL 188

Query: 192 LLISGSVVYFRRKRSVSTAGFASGRVQSNSRF 218
           LL+SG VVY RRKR+++ +G    RVQ+NSRF
Sbjct: 189 LLVSGPVVYIRRKRTIAMSGVGPVRVQTNSRF 218

The following BLAST results are available for this feature:

BLAST of Carg07994 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518468.1	2.6e-116	98.62	uncharacterized protein LOC111781939 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_022943147.1	2.2e-115	98.62	uncharacterized protein LOC111447964 isoform X3 [Cucurbita moschata]	[more]
XP_022993067.1	3.5e-113	96.31	uncharacterized protein LOC111489192 isoform X1 [Cucurbita maxima]	[more]
XP_022993076.1	3.3e-111	95.85	uncharacterized protein LOC111489192 isoform X2 [Cucurbita maxima]	[more]
XP_023518452.1	7.3e-111	84.58	uncharacterized protein LOC111781939 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg07994 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69980.1	2.5e-36	40.38	unknown protein	[more]

BLAST of Carg07994 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg07994 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KVR8\|A0A0A0KVR8_CUCSA	7.8e-85	79.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604010 PE=4 SV=1	[more]
tr\|A0A1S3BEP2\|A0A1S3BEP2_CUCME	1.0e-84	77.42	uncharacterized protein LOC103489059 OS=Cucumis melo OX=3656 GN=LOC103489059 PE=...	[more]
tr\|A0A1Q3C9X8\|A0A1Q3C9X8_CEPFO	1.9e-51	56.04	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_20519 PE=4...	[more]
tr\|M5XNF3\|M5XNF3_PRUPE	6.2e-50	57.77	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G262900 PE=4 SV=1	[more]
tr\|A0A2G5F2V4\|A0A2G5F2V4_AQUCA	2.4e-49	52.83	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00200389v1 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07994-RA	Carg07994-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36336	FAMILY NOT NAMED	coord: 8..217

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07994	Cla010131	Watermelon (97103) v1	carwmB0372
Carg07994	Csa5G604010	Cucumber (Chinese Long) v2	carcuB0408
Carg07994	MELO3C012041	Melon (DHL92) v3.5.1	carmeB0376
Carg07994	ClCG05G024860	Watermelon (Charleston Gray)	carwcgB0371
Carg07994	CSPI05G23160	Wild cucumber (PI 183967)	carcpiB0412
Carg07994	Cucsa.285610	Cucumber (Gy14) v1	carcgyB0438
Carg07994	CmaCh04G016090	Cucurbita maxima (Rimu)	carcmaB0530
Carg07994	CmaCh04G003150	Cucurbita maxima (Rimu)	carcmaB0529
Carg07994	CmoCh04G016870	Cucurbita moschata (Rifu)	carcmoB0515
Carg07994	CmoCh04G003310	Cucurbita moschata (Rifu)	carcmoB0514
Carg07994	Lsi04G004990	Bottle gourd (USVL1VR-Ls)	carlsiB344
Carg07994	Cp4.1LG01g04020	Cucurbita pepo (Zucchini)	carcpeB0527
Carg07994	Cp4.1LG01g12850	Cucurbita pepo (Zucchini)	carcpeB0528
Carg07994	CsGy5G022640	Cucumber (Gy14) v2	carcgybB0387
Carg07994	MELO3C012041.2	Melon (DHL92) v3.6.1	carmedB0381
Carg07994	CsaV3_5G032050	Cucumber (Chinese Long) v3	carcucB0411
Carg07994	Cla97C05G106970	Watermelon (97103) v2	carwmbB0397
Carg07994	Bhi07G001336	Wax gourd	carwgoB0465

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07994	Carg01749	Silver-seed gourd	carcarB405

The following block(s) are covering this gene:

None