Cp4.1LG01g03880 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g03880
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc finger, C2H2
LocationCp4.1LG01 : 1507245 .. 1507793 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAGAAGTCGTCGAGCTATAATTTGGAAGAACACGAAAGTGGGTTATTTTCTTCAACCTCTAATGTTGAAAAAAAAGTAAAACTTTTTGGATTTGAGCTAAACCCATCAAACAACCATGAACTTGGATCAAGTTGTTGCTTGAATGGCGAAGGCGATGAGAGTGTAAACTCTTCAACAACGGTCTGTTTTGAAAGAGCAGAGCCCAAATTTGAGTGCCAATATTGTTTGAAGGAGTTTAGAAATTCTCAAGCTTTGGGAGGCCATCAAAATGCCCACAAGAAAGAGAGGCTGAAGAAGAAGAAGGAGAAGATGGAGCTTCAAGCTACAAATGCTTCCCTCACTTATCTTCTCTACACTCATAATTCTTCGCACATTACTTTCACTCAAAACGGCGCTAAGTTTATCCATTTCGATGGTTCTGCGCCGCCGCCCGACAAGGCTGTCGGTTATGTGTCTTCCTCTTCTTCTTCTTCTTGTTTGCCTGTTTCTAATGATCATAGGCGTTCTTCTAAGTCTTTGGATCTTCACCTTGGTTTCAATTGA

mRNA sequence

ATGGGAAAGAAGTCGTCGAGCTATAATTTGGAAGAACACGAAAGTGGGTTATTTTCTTCAACCTCTAATGTTGAAAAAAAAGTAAAACTTTTTGGATTTGAGCTAAACCCATCAAACAACCATGAACTTGGATCAAGTTGTTGCTTGAATGGCGAAGGCGATGAGAGTGTAAACTCTTCAACAACGGTCTGTTTTGAAAGAGCAGAGCCCAAATTTGAGTGCCAATATTGTTTGAAGGAGTTTAGAAATTCTCAAGCTTTGGGAGGCCATCAAAATGCCCACAAGAAAGAGAGGCTGAAGAAGAAGAAGGAGAAGATGGAGCTTCAAGCTACAAATGCTTCCCTCACTTATCTTCTCTACACTCATAATTCTTCGCACATTACTTTCACTCAAAACGGCGCTAAGTTTATCCATTTCGATGGTTCTGCGCCGCCGCCCGACAAGGCTGTCGGTTATGTGTCTTCCTCTTCTTCTTCTTCTTGTTTGCCTGTTTCTAATGATCATAGGCGTTCTTCTAAGTCTTTGGATCTTCACCTTGGTTTCAATTGA

Coding sequence (CDS)

ATGGGAAAGAAGTCGTCGAGCTATAATTTGGAAGAACACGAAAGTGGGTTATTTTCTTCAACCTCTAATGTTGAAAAAAAAGTAAAACTTTTTGGATTTGAGCTAAACCCATCAAACAACCATGAACTTGGATCAAGTTGTTGCTTGAATGGCGAAGGCGATGAGAGTGTAAACTCTTCAACAACGGTCTGTTTTGAAAGAGCAGAGCCCAAATTTGAGTGCCAATATTGTTTGAAGGAGTTTAGAAATTCTCAAGCTTTGGGAGGCCATCAAAATGCCCACAAGAAAGAGAGGCTGAAGAAGAAGAAGGAGAAGATGGAGCTTCAAGCTACAAATGCTTCCCTCACTTATCTTCTCTACACTCATAATTCTTCGCACATTACTTTCACTCAAAACGGCGCTAAGTTTATCCATTTCGATGGTTCTGCGCCGCCGCCCGACAAGGCTGTCGGTTATGTGTCTTCCTCTTCTTCTTCTTCTTGTTTGCCTGTTTCTAATGATCATAGGCGTTCTTCTAAGTCTTTGGATCTTCACCTTGGTTTCAATTGA

Protein sequence

MGKKSSSYNLEEHESGLFSSTSNVEKKVKLFGFELNPSNNHELGSSCCLNGEGDESVNSSTTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNSSHITFTQNGAKFIHFDGSAPPPDKAVGYVSSSSSSSCLPVSNDHRRSSKSLDLHLGFN
Homology
[Close]
BLAST of Cp4.1LG01g03880 vs. Swiss-Prot
Match: ZFP5_ARATH (Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.7e-17
Identity = 61/130 (46.92%), Postives = 75/130 (57.69%), Query Frame = 1 

Query: 7   SYNLEEHESGLFSSTSNVEKKVKLFGFEL-NPSNNHELGSSCCLNGEGDESVNSSTTVCF 66
           S N     +G  SS S+ +K +KLFGFEL + S   E+ ++        ESV+SST    
Sbjct: 2   SINPTMSRTGESSSGSSSDKTIKLFGFELISGSRTPEITTA--------ESVSSSTNTTS 61

Query: 67  ERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNSS 126
                + ECQYC KEF NSQALGGHQNAHKKERLKKK  +++LQA  AS+ Y L  H   
Sbjct: 62  LTVMKRHECQYCGKEFANSQALGGHQNAHKKERLKKK--RLQLQARRASIGYYLTNHQQP 121

Query: 127 HITFTQNGAK 136
             T  Q   K
Sbjct: 122 ITTSFQRQYK 121

[Close]
BLAST of Cp4.1LG01g03880 vs. Swiss-Prot
Match: GIS2_ARATH (Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.9e-09
Identity = 37/92 (40.22%), Postives = 51/92 (55.43%), Query Frame = 1 

Query: 19  SSTSNVEKKVKLFGFELNPSNNHELGSSCCLNGEGDESVNSSTTVCFERAEPKFECQYCL 78
           +S S  E+ ++LFGFE   S  HE   S     E +ES+        +  E +F+C YC 
Sbjct: 10  NSFSPKERPIRLFGFEFGAS--HEESESKDNYNENNESIKD------DNKEKRFKCHYCF 69

Query: 79  KEFRNSQALGGHQNAHKKERLKKKKEKMELQA 111
           + F  SQALGGHQNAHK+ER + K+  +   A
Sbjct: 70  RNFPTSQALGGHQNAHKRERQQTKRFNLHSNA 93

[Close]
BLAST of Cp4.1LG01g03880 vs. Swiss-Prot
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-07
Identity = 36/79 (45.57%), Postives = 45/79 (56.96%), Query Frame = 1 

Query: 28  VKLFGFELNPSNNHELGSSCCLNGEGDESVNSSTTVCFERAEPKFECQYCLKEFRNSQAL 87
           +KLFG  L  + + +  SS    G G  S +            K+ECQYC +EF NSQAL
Sbjct: 8   LKLFGINLLETTSVQNQSSEPRPGSGSGSESR-----------KYECQYCCREFANSQAL 67

Query: 88  GGHQNAHKKERLKKKKEKM 107
           GGHQNAHKKER   K+ +M
Sbjct: 68  GGHQNAHKKERQLLKRAQM 75

[Close]
BLAST of Cp4.1LG01g03880 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.7e-06
Identity = 32/76 (42.11%), Postives = 43/76 (56.58%), Query Frame = 1 

Query: 40  NHELGSSCCLNGEGDESVNSSTT---VCFERAEPKFECQYCLKEFRNSQALGGHQNAHKK 99
           NH+L     L      S +SS+T    C E+    F C YC ++F +SQALGGHQNAHK 
Sbjct: 18  NHQLNLELVLEPSSMSSSSSSSTNSSSCLEQPRV-FSCNYCQRKFYSSQALGGHQNAHKL 77

Query: 100 ERLKKKKEKMELQATN 113
           ER   KK +   +++N
Sbjct: 78  ERTLAKKSRELFRSSN 92

[Close]
BLAST of Cp4.1LG01g03880 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.2e-06
Identity = 32/75 (42.67%), Postives = 47/75 (62.67%), Query Frame = 1 

Query: 38  SNNHELGSSCCLNGEGDESVNSSTTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKE 97
           +++HEL    C++ +    VN STT   ++    F C YC + F +SQALGGHQNAHK+E
Sbjct: 31  NSSHELNLIDCID-DTTSIVNESTTSTEQKL---FSCNYCQRTFYSSQALGGHQNAHKRE 90

Query: 98  R-LKKKKEKMELQAT 112
           R L K+ ++M   A+
Sbjct: 91  RTLAKRGQRMAASAS 101

[Close]
BLAST of Cp4.1LG01g03880 vs. TrEMBL
Match: A0A0A1EL03_GOSHI (C2H2 zinc finger protein 5 OS=Gossypium hirsutum GN=ZFP5 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.5e-22
Identity = 68/121 (56.20%), Postives = 82/121 (67.77%), Query Frame = 1 

Query: 14  ESGLFSSTSNVEKKVKLFGFELNPSNNHELGSSCCLNGEGDESVNSSTTVC--------- 73
           E+G   +  +VEKK++LFGFELNPSN++  G S  + GEGDESVNSS T+          
Sbjct: 9   ENGYSQAGFSVEKKLRLFGFELNPSNSN--GDSMKVCGEGDESVNSSNTISSTAKEKSSM 68

Query: 74  FERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNS 126
            E  + KFECQYC KEF NSQALGGHQNAHKKER+KKK  +++LQA  ASL   L    S
Sbjct: 69  VEADDKKFECQYCFKEFANSQALGGHQNAHKKERMKKK--RLQLQAKRASLNCYLQPFQS 125

[Close]
BLAST of Cp4.1LG01g03880 vs. TrEMBL
Match: I3SI07_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.5e-22
Identity = 83/205 (40.49%), Postives = 112/205 (54.63%), Query Frame = 1 

Query: 23  NVEKKVKLFGFELNPSNNHELGSSCCLNGEGDESVNSSTTVCF-------------ERAE 82
           +VEK+++LFGFELNP+ N+  G +   N EGDESVNSS ++               ++ E
Sbjct: 9   SVEKRLRLFGFELNPTKNNNEGVAKESN-EGDESVNSSNSISSGGDKIVQEKNSSKDQDE 68

Query: 83  PKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNSSHITF 142
            KFECQYC KEF NSQALGGHQNAHKKERLKKK  +++LQA  AS+ Y L     +H  F
Sbjct: 69  RKFECQYCFKEFANSQALGGHQNAHKKERLKKK--RLQLQARKASINYYLQPFQKNHHGF 128

Query: 143 TQNGAKFIH--FDGSAPPPDKAVG------------------------YVSSSSSSSCL- 183
           + +G+   H  +D S+   + ++                         +VS S   +C+ 
Sbjct: 129 SYHGSDHTHWFYDPSSYNSEFSLSEESQISFKSKNVHDTNSSWYSPPSHVSPSQQDTCMF 188

[Close]
BLAST of Cp4.1LG01g03880 vs. TrEMBL
Match: B9S2J5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0699890 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.3e-22
Identity = 77/159 (48.43%), Postives = 95/159 (59.75%), Query Frame = 1 

Query: 4   KSSSYNLEEHESG--LFSSTSNVEKKVKLFGFELNPSNNHELGSSCCLNGEGDESVNSST 63
           K  SY L     G    S+ S VEKK+KLFGFELNP  N E   SC  + EGDESVNSS 
Sbjct: 3   KEVSYILSSSLDGENCHSAESCVEKKLKLFGFELNPIRNDE---SCKGSVEGDESVNSSN 62

Query: 64  TVCFERAEP-------------KFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMEL 123
           TV  ER +P             KFECQYC KEF NSQALGGHQNAHKKER+KKK  +++L
Sbjct: 63  TVSSEREKPVKEKSSVGEPDDKKFECQYCFKEFANSQALGGHQNAHKKERMKKK--RLQL 122

Query: 124 QATNASLTYLLYTHNSSHITFTQNGAKFIHFDGSAPPPD 148
           QA  AS++  L     +++++   G+    +D S   P+
Sbjct: 123 QARKASISCYLQPF-QNNLSYNCQGSTQWFYDPSCSTPE 155

[Close]
BLAST of Cp4.1LG01g03880 vs. TrEMBL
Match: A0A0D2RHM9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G186400 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.3e-22
Identity = 67/121 (55.37%), Postives = 82/121 (67.77%), Query Frame = 1 

Query: 14  ESGLFSSTSNVEKKVKLFGFELNPSNNHELGSSCCLNGEGDESVNSSTTVCF-------- 73
           E+G   +  +VEKK++LFGFELNPSN++  G S  + GEGDESVNSS T+          
Sbjct: 9   ENGYSQAGFSVEKKLRLFGFELNPSNSN--GDSMKVCGEGDESVNSSNTISSTAKEKSSM 68

Query: 74  -ERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNS 126
            E  + KFECQYC KEF NSQALGGHQNAHKKER+KKK  +++LQA  ASL   L    +
Sbjct: 69  AEADDKKFECQYCFKEFANSQALGGHQNAHKKERMKKK--RLQLQAKRASLNCYLQPFQN 125

[Close]
BLAST of Cp4.1LG01g03880 vs. TrEMBL
Match: A0A0A0KVQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603380 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.3e-22
Identity = 82/167 (49.10%), Postives = 95/167 (56.89%), Query Frame = 1 

Query: 1   MGKKSSSYNLE-EHESGLFSSTSNVEKKVKLFGFELNPSNNHELGSSCCLN--GEGD-ES 60
           MGK S   N + E E GLF     +EKKVKLFG ELNPSNN       C N   +GD ES
Sbjct: 2   MGKDSFCCNFDPEKEGGLFGGGCCMEKKVKLFGIELNPSNNF------CNNFHDQGDHES 61

Query: 61  VNSS----TTVCFERAEP------------------------------KFECQYCLKEFR 120
           VNSS    TTVCF++                                 KFECQYCLKEF 
Sbjct: 62  VNSSTTTATTVCFDQRSSTNQQEQEEDDQEEAADIVVISNNNNNKKATKFECQYCLKEFT 121

Query: 121 NSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNSSHITF 130
           NSQALGGHQNAHKKERLKKK  KM+LQA  A+LTY L ++++++  F
Sbjct: 122 NSQALGGHQNAHKKERLKKK--KMQLQARKATLTYYLQSNSNNNNHF 160

[Close]
BLAST of Cp4.1LG01g03880 vs. TAIR10
Match: AT1G10480.1 (AT1G10480.1 zinc finger protein 5)

HSP 1 Score: 88.6 bits (218), Expect = 4.4e-18
Identity = 61/130 (46.92%), Postives = 75/130 (57.69%), Query Frame = 1 

Query: 7   SYNLEEHESGLFSSTSNVEKKVKLFGFEL-NPSNNHELGSSCCLNGEGDESVNSSTTVCF 66
           S N     +G  SS S+ +K +KLFGFEL + S   E+ ++        ESV+SST    
Sbjct: 2   SINPTMSRTGESSSGSSSDKTIKLFGFELISGSRTPEITTA--------ESVSSSTNTTS 61

Query: 67  ERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNSS 126
                + ECQYC KEF NSQALGGHQNAHKKERLKKK  +++LQA  AS+ Y L  H   
Sbjct: 62  LTVMKRHECQYCGKEFANSQALGGHQNAHKKERLKKK--RLQLQARRASIGYYLTNHQQP 121

Query: 127 HITFTQNGAK 136
             T  Q   K
Sbjct: 122 ITTSFQRQYK 121

[Close]
BLAST of Cp4.1LG01g03880 vs. TAIR10
Match: AT5G06650.1 (AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 62.4 bits (150), Expect = 3.3e-10
Identity = 37/92 (40.22%), Postives = 51/92 (55.43%), Query Frame = 1 

Query: 19  SSTSNVEKKVKLFGFELNPSNNHELGSSCCLNGEGDESVNSSTTVCFERAEPKFECQYCL 78
           +S S  E+ ++LFGFE   S  HE   S     E +ES+        +  E +F+C YC 
Sbjct: 10  NSFSPKERPIRLFGFEFGAS--HEESESKDNYNENNESIKD------DNKEKRFKCHYCF 69

Query: 79  KEFRNSQALGGHQNAHKKERLKKKKEKMELQA 111
           + F  SQALGGHQNAHK+ER + K+  +   A
Sbjct: 70  RNFPTSQALGGHQNAHKRERQQTKRFNLHSNA 93

[Close]
BLAST of Cp4.1LG01g03880 vs. TAIR10
Match: AT1G68360.1 (AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 58.9 bits (141), Expect = 3.7e-09
Identity = 39/79 (49.37%), Postives = 49/79 (62.03%), Query Frame = 1 

Query: 69  EPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQAT-NASLTYLLYTHNSSHI 128
           E K+ECQYC +EF NSQALGGHQNAHKKER + K  + +LQAT NA+     +++  S  
Sbjct: 70  ERKYECQYCCREFGNSQALGGHQNAHKKERQQLK--RAQLQATRNAAAN---FSNAGSAS 129

Query: 129 TFTQNGAKFIHFDGSAPPP 147
            F +N          APPP
Sbjct: 130 QFLRNPI----VSAFAPPP 139

[Close]
BLAST of Cp4.1LG01g03880 vs. TAIR10
Match: AT1G67030.1 (AT1G67030.1 zinc finger protein 6)

HSP 1 Score: 57.8 bits (138), Expect = 8.2e-09
Identity = 36/79 (45.57%), Postives = 45/79 (56.96%), Query Frame = 1 

Query: 28  VKLFGFELNPSNNHELGSSCCLNGEGDESVNSSTTVCFERAEPKFECQYCLKEFRNSQAL 87
           +KLFG  L  + + +  SS    G G  S +            K+ECQYC +EF NSQAL
Sbjct: 8   LKLFGINLLETTSVQNQSSEPRPGSGSGSESR-----------KYECQYCCREFANSQAL 67

Query: 88  GGHQNAHKKERLKKKKEKM 107
           GGHQNAHKKER   K+ +M
Sbjct: 68  GGHQNAHKKERQLLKRAQM 75

[Close]
BLAST of Cp4.1LG01g03880 vs. TAIR10
Match: AT5G57520.1 (AT5G57520.1 zinc finger protein 2)

HSP 1 Score: 52.8 bits (125), Expect = 2.7e-07
Identity = 32/76 (42.11%), Postives = 43/76 (56.58%), Query Frame = 1 

Query: 40  NHELGSSCCLNGEGDESVNSSTT---VCFERAEPKFECQYCLKEFRNSQALGGHQNAHKK 99
           NH+L     L      S +SS+T    C E+    F C YC ++F +SQALGGHQNAHK 
Sbjct: 18  NHQLNLELVLEPSSMSSSSSSSTNSSSCLEQPRV-FSCNYCQRKFYSSQALGGHQNAHKL 77

Query: 100 ERLKKKKEKMELQATN 113
           ER   KK +   +++N
Sbjct: 78  ERTLAKKSRELFRSSN 92

[Close]
BLAST of Cp4.1LG01g03880 vs. NCBI nr
Match: gi|659090894|ref|XP_008446260.1| (PREDICTED: zinc finger protein 5 [Cucumis melo])

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-22
Identity = 92/212 (43.40%), Postives = 116/212 (54.72%), Query Frame = 1 

Query: 1   MGKKSSSYNLE-EHESGLFSSTSNVEKKVKLFGFELNPSNNHELGSSCCLNGEGD-ESVN 60
           MGK S   + + E ESGLF+ +  +EKKVKLFG ELNPSNN    S    + +GD ESVN
Sbjct: 1   MGKDSFCCDFDQEKESGLFAGSCCMEKKVKLFGIELNPSNN----SCNKFHDQGDHESVN 60

Query: 61  SS----TTVCFE----------------------------RAEPKFECQYCLKEFRNSQA 120
           SS    TTVCF+                            R   KFECQYCLKEF NSQA
Sbjct: 61  SSTTTTTTVCFDQRSSSNQQEQEEDDQEEAANIVIINNNNRKATKFECQYCLKEFTNSQA 120

Query: 121 LGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNSSHITFTQNGAKFIHFDGSAPPP 179
           LGGHQNAHKKERLKKK  KM+LQA  A+LTY L ++++++           HF      P
Sbjct: 121 LGGHQNAHKKERLKKK--KMQLQARKATLTYYLQSNSTNN-----------HFLYDYDNP 180

[Close]
BLAST of Cp4.1LG01g03880 vs. NCBI nr
Match: gi|725539088|gb|AIY30133.1| (C2H2 zinc finger protein 5 [Gossypium hirsutum])

HSP 1 Score: 114.4 bits (285), Expect = 2.1e-22
Identity = 68/121 (56.20%), Postives = 82/121 (67.77%), Query Frame = 1 

Query: 14  ESGLFSSTSNVEKKVKLFGFELNPSNNHELGSSCCLNGEGDESVNSSTTVC--------- 73
           E+G   +  +VEKK++LFGFELNPSN++  G S  + GEGDESVNSS T+          
Sbjct: 9   ENGYSQAGFSVEKKLRLFGFELNPSNSN--GDSMKVCGEGDESVNSSNTISSTAKEKSSM 68

Query: 74  FERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNS 126
            E  + KFECQYC KEF NSQALGGHQNAHKKER+KKK  +++LQA  ASL   L    S
Sbjct: 69  VEADDKKFECQYCFKEFANSQALGGHQNAHKKERMKKK--RLQLQAKRASLNCYLQPFQS 125

[Close]
BLAST of Cp4.1LG01g03880 vs. NCBI nr
Match: gi|388503666|gb|AFK39899.1| (unknown [Medicago truncatula])

HSP 1 Score: 114.4 bits (285), Expect = 2.1e-22
Identity = 83/205 (40.49%), Postives = 112/205 (54.63%), Query Frame = 1 

Query: 23  NVEKKVKLFGFELNPSNNHELGSSCCLNGEGDESVNSSTTVCF-------------ERAE 82
           +VEK+++LFGFELNP+ N+  G +   N EGDESVNSS ++               ++ E
Sbjct: 9   SVEKRLRLFGFELNPTKNNNEGVAKESN-EGDESVNSSNSISSGGDKIVQEKNSSKDQDE 68

Query: 83  PKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNSSHITF 142
            KFECQYC KEF NSQALGGHQNAHKKERLKKK  +++LQA  AS+ Y L     +H  F
Sbjct: 69  RKFECQYCFKEFANSQALGGHQNAHKKERLKKK--RLQLQARKASINYYLQPFQKNHHGF 128

Query: 143 TQNGAKFIH--FDGSAPPPDKAVG------------------------YVSSSSSSSCL- 183
           + +G+   H  +D S+   + ++                         +VS S   +C+ 
Sbjct: 129 SYHGSDHTHWFYDPSSYNSEFSLSEESQISFKSKNVHDTNSSWYSPPSHVSPSQQDTCMF 188

[Close]
BLAST of Cp4.1LG01g03880 vs. NCBI nr
Match: gi|223540706|gb|EEF42269.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 113.2 bits (282), Expect = 4.7e-22
Identity = 77/159 (48.43%), Postives = 95/159 (59.75%), Query Frame = 1 

Query: 4   KSSSYNLEEHESG--LFSSTSNVEKKVKLFGFELNPSNNHELGSSCCLNGEGDESVNSST 63
           K  SY L     G    S+ S VEKK+KLFGFELNP  N E   SC  + EGDESVNSS 
Sbjct: 3   KEVSYILSSSLDGENCHSAESCVEKKLKLFGFELNPIRNDE---SCKGSVEGDESVNSSN 62

Query: 64  TVCFERAEP-------------KFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMEL 123
           TV  ER +P             KFECQYC KEF NSQALGGHQNAHKKER+KKK  +++L
Sbjct: 63  TVSSEREKPVKEKSSVGEPDDKKFECQYCFKEFANSQALGGHQNAHKKERMKKK--RLQL 122

Query: 124 QATNASLTYLLYTHNSSHITFTQNGAKFIHFDGSAPPPD 148
           QA  AS++  L     +++++   G+    +D S   P+
Sbjct: 123 QARKASISCYLQPF-QNNLSYNCQGSTQWFYDPSCSTPE 155

[Close]
BLAST of Cp4.1LG01g03880 vs. NCBI nr
Match: gi|1000964177|ref|XP_015575264.1| (PREDICTED: zinc finger protein 5 [Ricinus communis])

HSP 1 Score: 113.2 bits (282), Expect = 4.7e-22
Identity = 77/159 (48.43%), Postives = 95/159 (59.75%), Query Frame = 1 

Query: 4   KSSSYNLEEHESG--LFSSTSNVEKKVKLFGFELNPSNNHELGSSCCLNGEGDESVNSST 63
           K  SY L     G    S+ S VEKK+KLFGFELNP  N E   SC  + EGDESVNSS 
Sbjct: 3   KEVSYILSSSLDGENCHSAESCVEKKLKLFGFELNPIRNDE---SCKGSVEGDESVNSSN 62

Query: 64  TVCFERAEP-------------KFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMEL 123
           TV  ER +P             KFECQYC KEF NSQALGGHQNAHKKER+KKK  +++L
Sbjct: 63  TVSSEREKPVKEKSSVGEPDDKKFECQYCFKEFANSQALGGHQNAHKKERMKKK--RLQL 122

Query: 124 QATNASLTYLLYTHNSSHITFTQNGAKFIHFDGSAPPPD 148
           QA  AS++  L     +++++   G+    +D S   P+
Sbjct: 123 QARKASISCYLQPF-QNNLSYNCQGSTQWFYDPSCSTPE 155

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g03880 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFP5_ARATH7.7e-1746.92Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1[more]
GIS2_ARATH5.9e-0940.22Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1[more]
ZFP6_ARATH1.5e-0745.57Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1[more]
ZFP2_ARATH4.7e-0642.11Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1[more]
ZFP3_ARATH6.2e-0642.67Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1[more]
BLAST of Cp4.1LG01g03880 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A1EL03_GOSHI1.5e-2256.20C2H2 zinc finger protein 5 OS=Gossypium hirsutum GN=ZFP5 PE=2 SV=1[more]
I3SI07_MEDTR1.5e-2240.49Uncharacterized protein OS=Medicago truncatula PE=2 SV=1[more]
B9S2J5_RICCO3.3e-2248.43Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0699890 PE=4 SV=1[more]
A0A0D2RHM9_GOSRA4.3e-2255.37Uncharacterized protein OS=Gossypium raimondii GN=B456_005G186400 PE=4 SV=1[more]
A0A0A0KVQ6_CUCSA4.3e-2249.10Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603380 PE=4 SV=1[more]
BLAST of Cp4.1LG01g03880 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10480.14.4e-1846.92 zinc finger protein 5[more]
AT5G06650.13.3e-1040.22 C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G68360.13.7e-0949.37 C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G67030.18.2e-0945.57 zinc finger protein 6[more]
AT5G57520.12.7e-0742.11 zinc finger protein 2[more]
BLAST of Cp4.1LG01g03880 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090894|ref|XP_008446260.1|1.6e-2243.40PREDICTED: zinc finger protein 5 [Cucumis melo][more]
gi|725539088|gb|AIY30133.1|2.1e-2256.20C2H2 zinc finger protein 5 [Gossypium hirsutum][more]
gi|388503666|gb|AFK39899.1|2.1e-2240.49unknown [Medicago truncatula][more]
gi|223540706|gb|EEF42269.1|4.7e-2248.43conserved hypothetical protein [Ricinus communis][more]
gi|1000964177|ref|XP_015575264.1|4.7e-2248.43PREDICTED: zinc finger protein 5 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR007087Zinc finger, C2H2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0050789 regulation of biological process
biological_process GO:0044699 single-organism process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g03880.1Cp4.1LG01g03880.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PFAMPF13912zf-C2H2_6coord: 72..96
score: 3.
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 74..94
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 72..99
score: 11
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 71..98
score: 6.
NoneNo IPR availableunknownCoilCoilcoord: 96..116
scor
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 69..99
score: 6.2