CmoCh04G003150 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G003150
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Nucleic acid binding protein, putative
Location	Cmo_Chr04 : 1562805 .. 1563356 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAGAACTCGTCGAGCTATAATTTGGAAGAACACGAAAGTGGGTTATTTGCTTCAACCTCTAATGTTGAGAAAAAAGTAAAACTTTTTGGATTTGAGCTAAACCCATCAAAGAACCATGAACTTGGATCAAGTTCTTGCTTGAATGGCGAAGGCGATGAGAGTGTAAACTCTTCAACAACGGTCTGTTTTGAAAGAGCAGAGCCCAAATTTGAGTGCCAATATTGTTTGAAGGAGTTCAGAAATTCGCAAGCTTTGGGAGGCCATCAAAATGCCCACAAGAAAGAGAGGCTGAAGAAGAAGAAGGAGAAGATGGAGCTTCAAGCTACAAATGCTTCCCTCACTTATCTTCTCTACACTCATAATTCTTCGCAGATTAGTTTCAGTCAAAACGGCGCTAAGTTTATCCATTTCGATGGTTCTGTGCCGCCGGCCGACAAGGCTGTCGGTTATGTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGCCTGTTTGTAATGATCATAGGCGTTCTTGTAAGTCTTTGGATCTTCAACTTGGTTTCAATTGA

mRNA sequence

ATGGGAAAGAACTCGTCGAGCTATAATTTGGAAGAACACGAAAGTGGGTTATTTGCTTCAACCTCTAATGTTGAGAAAAAAGTAAAACTTTTTGGATTTGAGCTAAACCCATCAAAGAACCATGAACTTGGATCAAGTTCTTGCTTGAATGGCGAAGGCGATGAGAGTGTAAACTCTTCAACAACGGTCTGTTTTGAAAGAGCAGAGCCCAAATTTGAGTGCCAATATTGTTTGAAGGAGTTCAGAAATTCGCAAGCTTTGGGAGGCCATCAAAATGCCCACAAGAAAGAGAGGCTGAAGAAGAAGAAGGAGAAGATGGAGCTTCAAGCTACAAATGCTTCCCTCACTTATCTTCTCTACACTCATAATTCTTCGCAGATTAGTTTCAGTCAAAACGGCGCTAAGTTTATCCATTTCGATGGTTCTGTGCCGCCGGCCGACAAGGCTGTCGGTTATGTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGCCTGTTTGTAATGATCATAGGCGTTCTTGTAAGTCTTTGGATCTTCAACTTGGTTTCAATTGA

Coding sequence (CDS)

ATGGGAAAGAACTCGTCGAGCTATAATTTGGAAGAACACGAAAGTGGGTTATTTGCTTCAACCTCTAATGTTGAGAAAAAAGTAAAACTTTTTGGATTTGAGCTAAACCCATCAAAGAACCATGAACTTGGATCAAGTTCTTGCTTGAATGGCGAAGGCGATGAGAGTGTAAACTCTTCAACAACGGTCTGTTTTGAAAGAGCAGAGCCCAAATTTGAGTGCCAATATTGTTTGAAGGAGTTCAGAAATTCGCAAGCTTTGGGAGGCCATCAAAATGCCCACAAGAAAGAGAGGCTGAAGAAGAAGAAGGAGAAGATGGAGCTTCAAGCTACAAATGCTTCCCTCACTTATCTTCTCTACACTCATAATTCTTCGCAGATTAGTTTCAGTCAAAACGGCGCTAAGTTTATCCATTTCGATGGTTCTGTGCCGCCGGCCGACAAGGCTGTCGGTTATGTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGCCTGTTTGTAATGATCATAGGCGTTCTTGTAAGTCTTTGGATCTTCAACTTGGTTTCAATTGA

Homology

[Close]

BLAST of CmoCh04G003150 vs. Swiss-Prot
Match: ZFP5_ARATH (Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-16
Identity = 71/179 (39.66%), Postives = 95/179 (53.07%), Query Frame = 1


Query: 7   SYNLEEHESGLFASTSNVEKKVKLFGFEL-NPSKNHELGSSSCLNGEGDESVNSSTTVCF 66
           S N     +G  +S S+ +K +KLFGFEL + S+  E+ ++        ESV+SST    
Sbjct: 2   SINPTMSRTGESSSGSSSDKTIKLFGFELISGSRTPEITTA--------ESVSSSTNTTS 61

Query: 67  ERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNSS 126
                + ECQYC KEF NSQALGGHQNAHKKERLKKK  +++LQA  AS+ Y L  H   
Sbjct: 62  LTVMKRHECQYCGKEFANSQALGGHQNAHKKERLKKK--RLQLQARRASIGYYLTNHQQP 121

Query: 127 QISFSQNGAK---FIHFDGSVPPADKAVGYVSSSSSSSSSLPVCNDHRRSCKSLDLQLG 182
             +  Q   K   +  F       D+   Y    SS SS +   N+   +C+ L+ Q G
Sbjct: 122 ITTSFQRQYKTPSYCAFSSMHVNNDQMGVYNEDWSSRSSQINFGNND--TCQDLNEQSG 168

[Close]

BLAST of CmoCh04G003150 vs. Swiss-Prot
Match: GIS2_ARATH (Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.6e-09
Identity = 37/91 (40.66%), Postives = 50/91 (54.95%), Query Frame = 1


Query: 20  STSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSSTTVCFERAEPKFECQYCLK 79
           S S  E+ ++LFGFE   S  HE   S     E +ES+        +  E +F+C YC +
Sbjct: 11  SFSPKERPIRLFGFEFGAS--HEESESKDNYNENNESIKD------DNKEKRFKCHYCFR 70

Query: 80  EFRNSQALGGHQNAHKKERLKKKKEKMELQA 111
            F  SQALGGHQNAHK+ER + K+  +   A
Sbjct: 71  NFPTSQALGGHQNAHKRERQQTKRFNLHSNA 93

[Close]

BLAST of CmoCh04G003150 vs. Swiss-Prot
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.6e-08
Identity = 36/79 (45.57%), Postives = 45/79 (56.96%), Query Frame = 1


Query: 28  VKLFGFELNPSKNHELGSSSCLNGEGDESVNSSTTVCFERAEPKFECQYCLKEFRNSQAL 87
           +KLFG  L  + + +  SS    G G  S +            K+ECQYC +EF NSQAL
Sbjct: 8   LKLFGINLLETTSVQNQSSEPRPGSGSGSESR-----------KYECQYCCREFANSQAL 67

Query: 88  GGHQNAHKKERLKKKKEKM 107
           GGHQNAHKKER   K+ +M
Sbjct: 68  GGHQNAHKKERQLLKRAQM 75

[Close]

BLAST of CmoCh04G003150 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.1e-06
Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 1


Query: 39  KNHELGSSSCLNGEGDESVNSSTT---VCFERAEPKFECQYCLKEFRNSQALGGHQNAHK 98
           KNH+L     L      S +SS+T    C E+    F C YC ++F +SQALGGHQNAHK
Sbjct: 17  KNHQLNLELVLEPSSMSSSSSSSTNSSSCLEQPRV-FSCNYCQRKFYSSQALGGHQNAHK 76

Query: 99  KERLKKKKEKMELQATN 113
            ER   KK +   +++N
Sbjct: 77  LERTLAKKSRELFRSSN 92

[Close]

BLAST of CmoCh04G003150 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.7e-06
Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 1


Query: 38  SKNHELGSSSCLNGEGDESVNSSTTVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKE 97
           + +HEL    C++ +    VN STT   ++    F C YC + F +SQALGGHQNAHK+E
Sbjct: 31  NSSHELNLIDCID-DTTSIVNESTTSTEQKL---FSCNYCQRTFYSSQALGGHQNAHKRE 90

Query: 98  R-LKKKKEKMELQAT 112
           R L K+ ++M   A+
Sbjct: 91  RTLAKRGQRMAASAS 101

[Close]

BLAST of CmoCh04G003150 vs. TrEMBL
Match: A0A0A0KVQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603380 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.3e-30
Identity = 115/271 (42.44%), Postives = 131/271 (48.34%), Query Frame = 1


Query: 1   MGKNSSSYNLE-EHESGLFASTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGD-ESVN 60
           MGK+S   N + E E GLF     +EKKVKLFG ELNPS N      +  + +GD ESVN
Sbjct: 2   MGKDSFCCNFDPEKEGGLFGGGCCMEKKVKLFGIELNPSNNF----CNNFHDQGDHESVN 61

Query: 61  SS----TTVCFERAEP------------------------------KFECQYCLKEFRNS 120
           SS    TTVCF++                                 KFECQYCLKEF NS
Sbjct: 62  SSTTTATTVCFDQRSSTNQQEQEEDDQEEAADIVVISNNNNNKKATKFECQYCLKEFTNS 121

Query: 121 QALGGHQNAHKKERLKKKKEKMELQATNASLTYLL------------------------- 180
           QALGGHQNAHKKERLKKKK  M+LQA  A+LTY L                         
Sbjct: 122 QALGGHQNAHKKERLKKKK--MQLQARKATLTYYLQSNSNNNNHFLYDYDPNSSSPNSSF 181

Query: 181 -----YTHNSSQISFSQNGAKFIHFDGSVP----------------------PADKAVGY 184
                Y +NSSQISF+QN A  IHFD S+P                      P+   V +
Sbjct: 182 FISDDYYYNSSQISFNQNDAGLIHFDSSLPFLPQQQRQPFFTFTPPDMSSRRPSTNPVVF 241

[Close]

BLAST of CmoCh04G003150 vs. TrEMBL
Match: A0A061E6R5_THECC (C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=TCM_010176 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.5e-22
Identity = 75/154 (48.70%), Postives = 95/154 (61.69%), Query Frame = 1


Query: 14  ESGLFASTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSSTT---------VC 73
           E+G   + S VEKK++LFGFELNPSKN++    S  + EGDESVNSS+T           
Sbjct: 16  ENGYSPAASCVEKKLRLFGFELNPSKNNDNSLKS--SAEGDESVNSSSTRETPTKEKSST 75

Query: 74  FERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNS 133
            E  + KFECQYC KEF NSQALGGHQNAHKKER+KKK  +++LQA  AS+   L    +
Sbjct: 76  GETDDKKFECQYCFKEFANSQALGGHQNAHKKERMKKK--RLQLQAKRASINCYLQPFQN 135

Query: 134 SQISFSQNGAKFIHFDGSVPPADKAVGYVSSSSS 159
           S + FS  G+   ++D S   A +   Y  S  S
Sbjct: 136 S-LGFSYQGSTPWYYDSSCYSAPEITLYEESQIS 164

[Close]

BLAST of CmoCh04G003150 vs. TrEMBL
Match: I3SI07_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-22
Identity = 82/205 (40.00%), Postives = 107/205 (52.20%), Query Frame = 1


Query: 23  NVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSSTTVCF-------------ERAE 82
           +VEK+++LFGFELNP+KN+  G +   N EGDESVNSS ++               ++ E
Sbjct: 9   SVEKRLRLFGFELNPTKNNNEGVAKESN-EGDESVNSSNSISSGGDKIVQEKNSSKDQDE 68

Query: 83  PKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNSSQISF 142
            KFECQYC KEF NSQALGGHQNAHKKERLKKK  +++LQA  AS+ Y L     +   F
Sbjct: 69  RKFECQYCFKEFANSQALGGHQNAHKKERLKKK--RLQLQARKASINYYLQPFQKNHHGF 128

Query: 143 SQNGAKFIHF---------------DGSVPPADKAV-----------GYVSSSSSSSSSL 184
           S +G+   H+               +  +    K V            +VS S   +   
Sbjct: 129 SYHGSDHTHWFYDPSSYNSEFSLSEESQISFKSKNVHDTNSSWYSPPSHVSPSQQDTCMF 188

[Close]

BLAST of CmoCh04G003150 vs. TrEMBL
Match: A0A067JEW3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21764 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.3e-22
Identity = 71/134 (52.99%), Postives = 83/134 (61.94%), Query Frame = 1


Query: 10  LEEHESGLFAST----------SNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNS 69
           +E+  S +F+ST          S VEKK+KLFGFELNP +N E     C   EGDESVNS
Sbjct: 1   MEKETSNVFSSTLDGENCHSAESCVEKKLKLFGFELNPCRNEESYPKGC--AEGDESVNS 60

Query: 70  STTVCFERAEP--------------KFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEK 120
           S TV  E  +P              KFECQYC KEF NSQALGGHQNAHKKERLKKK  +
Sbjct: 61  SNTVSHEGEKPVMHKDSTKEPEDNKKFECQYCFKEFANSQALGGHQNAHKKERLKKK--R 120

[Close]

BLAST of CmoCh04G003150 vs. TrEMBL
Match: A0A0D2RHM9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G186400 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.3e-22
Identity = 92/220 (41.82%), Postives = 117/220 (53.18%), Query Frame = 1


Query: 14  ESGLFASTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSSTTVCF-------- 73
           E+G   +  +VEKK++LFGFELNPS ++  G S  + GEGDESVNSS T+          
Sbjct: 9   ENGYSQAGFSVEKKLRLFGFELNPSNSN--GDSMKVCGEGDESVNSSNTISSTAKEKSSM 68

Query: 74  -ERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLT-YLLYTHN 133
            E  + KFECQYC KEF NSQALGGHQNAHKKER+KKK  +++LQA  ASL  YL    N
Sbjct: 69  AEADDKKFECQYCFKEFANSQALGGHQNAHKKERMKKK--RLQLQAKRASLNCYLQPFQN 128

Query: 134 S------------------------SQISFSQNGAKFIHFDGS------------VP-PA 182
           S                        SQISFSQ   +  HF+GS            +P   
Sbjct: 129 SLGFGSPWYYDSPAYATADFTPYEESQISFSQ-FEQDSHFNGSHASNLNSLPSEMIPFQR 188

[Close]

BLAST of CmoCh04G003150 vs. TAIR10
Match: AT1G10480.1 (AT1G10480.1 zinc finger protein 5)

HSP 1 Score: 86.7 bits (213), Expect = 1.7e-17
Identity = 71/179 (39.66%), Postives = 95/179 (53.07%), Query Frame = 1


Query: 7   SYNLEEHESGLFASTSNVEKKVKLFGFEL-NPSKNHELGSSSCLNGEGDESVNSSTTVCF 66
           S N     +G  +S S+ +K +KLFGFEL + S+  E+ ++        ESV+SST    
Sbjct: 2   SINPTMSRTGESSSGSSSDKTIKLFGFELISGSRTPEITTA--------ESVSSSTNTTS 61

Query: 67  ERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNSS 126
                + ECQYC KEF NSQALGGHQNAHKKERLKKK  +++LQA  AS+ Y L  H   
Sbjct: 62  LTVMKRHECQYCGKEFANSQALGGHQNAHKKERLKKK--RLQLQARRASIGYYLTNHQQP 121

Query: 127 QISFSQNGAK---FIHFDGSVPPADKAVGYVSSSSSSSSSLPVCNDHRRSCKSLDLQLG 182
             +  Q   K   +  F       D+   Y    SS SS +   N+   +C+ L+ Q G
Sbjct: 122 ITTSFQRQYKTPSYCAFSSMHVNNDQMGVYNEDWSSRSSQINFGNND--TCQDLNEQSG 168

[Close]

BLAST of CmoCh04G003150 vs. TAIR10
Match: AT5G06650.1 (AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 2.6e-10
Identity = 37/91 (40.66%), Postives = 50/91 (54.95%), Query Frame = 1


Query: 20  STSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSSTTVCFERAEPKFECQYCLK 79
           S S  E+ ++LFGFE   S  HE   S     E +ES+        +  E +F+C YC +
Sbjct: 11  SFSPKERPIRLFGFEFGAS--HEESESKDNYNENNESIKD------DNKEKRFKCHYCFR 70

Query: 80  EFRNSQALGGHQNAHKKERLKKKKEKMELQA 111
            F  SQALGGHQNAHK+ER + K+  +   A
Sbjct: 71  NFPTSQALGGHQNAHKRERQQTKRFNLHSNA 93

[Close]

BLAST of CmoCh04G003150 vs. TAIR10
Match: AT1G67030.1 (AT1G67030.1 zinc finger protein 6)

HSP 1 Score: 58.9 bits (141), Expect = 3.7e-09
Identity = 36/79 (45.57%), Postives = 45/79 (56.96%), Query Frame = 1


Query: 28  VKLFGFELNPSKNHELGSSSCLNGEGDESVNSSTTVCFERAEPKFECQYCLKEFRNSQAL 87
           +KLFG  L  + + +  SS    G G  S +            K+ECQYC +EF NSQAL
Sbjct: 8   LKLFGINLLETTSVQNQSSEPRPGSGSGSESR-----------KYECQYCCREFANSQAL 67

Query: 88  GGHQNAHKKERLKKKKEKM 107
           GGHQNAHKKER   K+ +M
Sbjct: 68  GGHQNAHKKERQLLKRAQM 75

[Close]

BLAST of CmoCh04G003150 vs. TAIR10
Match: AT1G68360.1 (AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 6.4e-09
Identity = 44/117 (37.61%), Postives = 58/117 (49.57%), Query Frame = 1


Query: 20  STSNVEKKVKLFGFELN------------------PSKNHELGSSSCLNGEGDESVNSST 79
           S+     ++KLFGF ++                  P +      SS  +G G  S     
Sbjct: 7   SSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGG 66

Query: 80  TVCFERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQAT-NASLTY 118
                  E K+ECQYC +EF NSQALGGHQNAHKKER + K  + +LQAT NA+  +
Sbjct: 67  G----GGERKYECQYCCREFGNSQALGGHQNAHKKERQQLK--RAQLQATRNAAANF 117

[Close]

BLAST of CmoCh04G003150 vs. TAIR10
Match: AT5G57520.1 (AT5G57520.1 zinc finger protein 2)

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 1


Query: 39  KNHELGSSSCLNGEGDESVNSSTT---VCFERAEPKFECQYCLKEFRNSQALGGHQNAHK 98
           KNH+L     L      S +SS+T    C E+    F C YC ++F +SQALGGHQNAHK
Sbjct: 17  KNHQLNLELVLEPSSMSSSSSSSTNSSSCLEQPRV-FSCNYCQRKFYSSQALGGHQNAHK 76

Query: 99  KERLKKKKEKMELQATN 113
            ER   KK +   +++N
Sbjct: 77  LERTLAKKSRELFRSSN 92

[Close]

BLAST of CmoCh04G003150 vs. NCBI nr
Match: gi|700196664|gb|KGN51841.1| (hypothetical protein Csa_5G603380 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 4.7e-30
Identity = 115/271 (42.44%), Postives = 131/271 (48.34%), Query Frame = 1


Query: 1   MGKNSSSYNLE-EHESGLFASTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGD-ESVN 60
           MGK+S   N + E E GLF     +EKKVKLFG ELNPS N      +  + +GD ESVN
Sbjct: 2   MGKDSFCCNFDPEKEGGLFGGGCCMEKKVKLFGIELNPSNNF----CNNFHDQGDHESVN 61

Query: 61  SS----TTVCFERAEP------------------------------KFECQYCLKEFRNS 120
           SS    TTVCF++                                 KFECQYCLKEF NS
Sbjct: 62  SSTTTATTVCFDQRSSTNQQEQEEDDQEEAADIVVISNNNNNKKATKFECQYCLKEFTNS 121

Query: 121 QALGGHQNAHKKERLKKKKEKMELQATNASLTYLL------------------------- 180
           QALGGHQNAHKKERLKKKK  M+LQA  A+LTY L                         
Sbjct: 122 QALGGHQNAHKKERLKKKK--MQLQARKATLTYYLQSNSNNNNHFLYDYDPNSSSPNSSF 181

Query: 181 -----YTHNSSQISFSQNGAKFIHFDGSVP----------------------PADKAVGY 184
                Y +NSSQISF+QN A  IHFD S+P                      P+   V +
Sbjct: 182 FISDDYYYNSSQISFNQNDAGLIHFDSSLPFLPQQQRQPFFTFTPPDMSSRRPSTNPVVF 241

[Close]

BLAST of CmoCh04G003150 vs. NCBI nr
Match: gi|659090894|ref|XP_008446260.1| (PREDICTED: zinc finger protein 5 [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 2.6e-28
Identity = 113/269 (42.01%), Postives = 130/269 (48.33%), Query Frame = 1


Query: 1   MGKNSSSYNLE-EHESGLFASTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGD-ESVN 60
           MGK+S   + + E ESGLFA +  +EKKVKLFG ELNPS N    S +  + +GD ESVN
Sbjct: 1   MGKDSFCCDFDQEKESGLFAGSCCMEKKVKLFGIELNPSNN----SCNKFHDQGDHESVN 60

Query: 61  SSTT----VCFE----------------------------RAEPKFECQYCLKEFRNSQA 120
           SSTT    VCF+                            R   KFECQYCLKEF NSQA
Sbjct: 61  SSTTTTTTVCFDQRSSSNQQEQEEDDQEEAANIVIINNNNRKATKFECQYCLKEFTNSQA 120

Query: 121 LGGHQNAHKKERLKKKKE-----------KMELQATNASLTYLL---------------- 180
           LGGHQNAHKKERLKKKK             ++  +TN    Y                  
Sbjct: 121 LGGHQNAHKKERLKKKKMQLQARKATLTYYLQSNSTNNHFLYDYDNPNSSSSSPNSSFFI 180

Query: 181 ---YTHNSSQISFSQNGAKFIHFDGSVP----------------------PADKAVGYVS 184
              Y +NSSQISF+QN A  IHFD S+P                      P+   V + S
Sbjct: 181 SDDYYYNSSQISFNQNDAGLIHFDSSLPFLPQQQRRPFFTFTPPDMSSRQPSTNPVVFHS 240

[Close]

BLAST of CmoCh04G003150 vs. NCBI nr
Match: gi|590694034|ref|XP_007044496.1| (C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 114.4 bits (285), Expect = 2.1e-22
Identity = 75/154 (48.70%), Postives = 95/154 (61.69%), Query Frame = 1


Query: 14  ESGLFASTSNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSSTT---------VC 73
           E+G   + S VEKK++LFGFELNPSKN++    S  + EGDESVNSS+T           
Sbjct: 16  ENGYSPAASCVEKKLRLFGFELNPSKNNDNSLKS--SAEGDESVNSSSTRETPTKEKSST 75

Query: 74  FERAEPKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNS 133
            E  + KFECQYC KEF NSQALGGHQNAHKKER+KKK  +++LQA  AS+   L    +
Sbjct: 76  GETDDKKFECQYCFKEFANSQALGGHQNAHKKERMKKK--RLQLQAKRASINCYLQPFQN 135

Query: 134 SQISFSQNGAKFIHFDGSVPPADKAVGYVSSSSS 159
           S + FS  G+   ++D S   A +   Y  S  S
Sbjct: 136 S-LGFSYQGSTPWYYDSSCYSAPEITLYEESQIS 164

[Close]

BLAST of CmoCh04G003150 vs. NCBI nr
Match: gi|388503666|gb|AFK39899.1| (unknown [Medicago truncatula])

HSP 1 Score: 114.0 bits (284), Expect = 2.8e-22
Identity = 82/205 (40.00%), Postives = 107/205 (52.20%), Query Frame = 1


Query: 23  NVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNSSTTVCF-------------ERAE 82
           +VEK+++LFGFELNP+KN+  G +   N EGDESVNSS ++               ++ E
Sbjct: 9   SVEKRLRLFGFELNPTKNNNEGVAKESN-EGDESVNSSNSISSGGDKIVQEKNSSKDQDE 68

Query: 83  PKFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEKMELQATNASLTYLLYTHNSSQISF 142
            KFECQYC KEF NSQALGGHQNAHKKERLKKK  +++LQA  AS+ Y L     +   F
Sbjct: 69  RKFECQYCFKEFANSQALGGHQNAHKKERLKKK--RLQLQARKASINYYLQPFQKNHHGF 128

Query: 143 SQNGAKFIHF---------------DGSVPPADKAV-----------GYVSSSSSSSSSL 184
           S +G+   H+               +  +    K V            +VS S   +   
Sbjct: 129 SYHGSDHTHWFYDPSSYNSEFSLSEESQISFKSKNVHDTNSSWYSPPSHVSPSQQDTCMF 188

[Close]

BLAST of CmoCh04G003150 vs. NCBI nr
Match: gi|802787854|ref|XP_012092029.1| (PREDICTED: zinc finger protein 5 [Jatropha curcas])

HSP 1 Score: 113.2 bits (282), Expect = 4.7e-22
Identity = 71/134 (52.99%), Postives = 83/134 (61.94%), Query Frame = 1


Query: 10  LEEHESGLFAST----------SNVEKKVKLFGFELNPSKNHELGSSSCLNGEGDESVNS 69
           +E+  S +F+ST          S VEKK+KLFGFELNP +N E     C   EGDESVNS
Sbjct: 1   MEKETSNVFSSTLDGENCHSAESCVEKKLKLFGFELNPCRNEESYPKGC--AEGDESVNS 60

Query: 70  STTVCFERAEP--------------KFECQYCLKEFRNSQALGGHQNAHKKERLKKKKEK 120
           S TV  E  +P              KFECQYC KEF NSQALGGHQNAHKKERLKKK  +
Sbjct: 61  SNTVSHEGEKPVMHKDSTKEPEDNKKFECQYCFKEFANSQALGGHQNAHKKERLKKK--R 120

The following BLAST results are available for this feature:

BLAST of CmoCh04G003150 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZFP5_ARATH	3.0e-16	39.66	Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1	[more]
GIS2_ARATH	4.6e-09	40.66	Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1	[more]
ZFP6_ARATH	6.6e-08	45.57	Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1	[more]
ZFP2_ARATH	2.1e-06	42.86	Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1	[more]
ZFP3_ARATH	4.7e-06	42.67	Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1	[more]

BLAST of CmoCh04G003150 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVQ6_CUCSA	3.3e-30	42.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603380 PE=4 SV=1	[more]
A0A061E6R5_THECC	1.5e-22	48.70	C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=T...	[more]
I3SI07_MEDTR	1.9e-22	40.00	Uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]
A0A067JEW3_JATCU	3.3e-22	52.99	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21764 PE=4 SV=1	[more]
A0A0D2RHM9_GOSRA	3.3e-22	41.82	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G186400 PE=4 SV=1	[more]

BLAST of CmoCh04G003150 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10480.1	1.7e-17	39.66	zinc finger protein 5	[more]
AT5G06650.1	2.6e-10	40.66	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	3.7e-09	45.57	zinc finger protein 6	[more]
AT1G68360.1	6.4e-09	37.61	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G57520.1	1.2e-07	42.86	zinc finger protein 2	[more]

BLAST of CmoCh04G003150 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700196664\|gb\|KGN51841.1\|	4.7e-30	42.44	hypothetical protein Csa_5G603380 [Cucumis sativus]	[more]
gi\|659090894\|ref\|XP_008446260.1\|	2.6e-28	42.01	PREDICTED: zinc finger protein 5 [Cucumis melo]	[more]
gi\|590694034\|ref\|XP_007044496.1\|	2.1e-22	48.70	C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma cacao]	[more]
gi\|388503666\|gb\|AFK39899.1\|	2.8e-22	40.00	unknown [Medicago truncatula]	[more]
gi\|802787854\|ref\|XP_012092029.1\|	4.7e-22	52.99	PREDICTED: zinc finger protein 5 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2
IPR013087	Znf_C2H2_type

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0044699	single-organism process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G003150.1	CmoCh04G003150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PFAM	PF13912	zf-C2H2_6	coord: 72..96 score: 3.
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 74..94 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 72..99 score: 11
IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain	GENE3D	G3DSA:3.30.160.60		coord: 71..98 score: 6.
None	No IPR available	unknown	Coil	Coil	coord: 96..116 scor
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 69..99 score: 6.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G003150	Cucsa.285730	Cucumber (Gy14) v1	cgycmoB0798
CmoCh04G003150	CmaCh04G003020	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G003150	CmaCh04G015970	Cucurbita maxima (Rimu)	cmacmoB732
CmoCh04G003150	Cla010119	Watermelon (97103) v1	cmowmB700
CmoCh04G003150	Csa5G603380	Cucumber (Chinese Long) v2	cmocuB718
CmoCh04G003150	MELO3C012028	Melon (DHL92) v3.5.1	cmomeB647
CmoCh04G003150	ClCG05G024980	Watermelon (Charleston Gray)	cmowcgB661
CmoCh04G003150	CSPI05G23030	Wild cucumber (PI 183967)	cmocpiB726
CmoCh04G003150	Lsi04G005090	Bottle gourd (USVL1VR-Ls)	cmolsiB674
CmoCh04G003150	Cp4.1LG01g03880	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G003150	Cp4.1LG01g12960	Cucurbita pepo (Zucchini)	cmocpeB678
CmoCh04G003150	MELO3C012028.2	Melon (DHL92) v3.6.1	cmomedB737
CmoCh04G003150	CsaV3_5G031910	Cucumber (Chinese Long) v3	cmocucB0851
CmoCh04G003150	Cla97C05G107100	Watermelon (97103) v2	cmowmbB736
CmoCh04G003150	CsGy5G022500	Cucumber (Gy14) v2	cgybcmoB630
CmoCh04G003150	Carg01757	Silver-seed gourd	carcmoB1140
CmoCh04G003150	Carg07979	Silver-seed gourd	carcmoB0514

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G003150	CmoCh04G016710	Cucurbita moschata (Rifu)	cmocmoB465

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G003150	Wax gourd	cmowgoB0907