Cp4.1LG01g02370 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g02370
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCaspase-6
LocationCp4.1LG01 : 2424751 .. 2431914 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTATTTAAAATAACTTATTTCTTTAAATTTTTTTTTTTTTTTTATAAAAAAAGATCATTAAATTTACAGAAATCAGATCGGGCCGTCTGATTTCAATCATGCGGTGTATCATGCATAAGCCACATTCAAATCCATAGAATGCAATCCACCGTAGCATTTCTCTAGTAGGCATCCGTACCCTCGTAAAACCCTTGCTGAGCGCTGCTCATTGTGTGCGCTAAACCTCGACATCGGCTCGTCTTGCTGAATTTTGATCGAACGAAGACCTGCACTGCTAAAATGGCTTGGCGCCCTTCTGGATCTCTATCTCGCTCCCTGATTTCTACTGTTAGGGCTTCTTCTCTCCGATCAGCTCCTTCTCTTCCTCGGCTCCACCCACCACCTCTCGCCGCTCGACCTCGTCTTCAATCTCGTCGGCTTTCATTTTCAACTTCCAGGTACTTCACAAGTTTCTTAATCGGCTTTTTGGTTTCAGTGCGAAACGAATTGTTGAATGGATTAGAAGTGTTGTTGAATTCTGAATTGTTTGATGCCAGATGCCTGCTTTACTATTCTTAGTATGTAGTTTCCCACACATCTAAATATGAGAGAATTTGTTAGTAATAGTTAGTTTAAGTTGCTATTTTTTTACCGTTGTAAGTAGTTATTTTTAGCTTGTGAGTTGTGATTGAATGAAATTGTAGACTTTCCCAATTCTCCCCCTTCTCCCCCTTCTCTTGAGCAATAATGGAAATACTTAGTCGTGTTAGTAGAATTTTCCGATGCTCAAAGAATCGGTGAGTCTCAATGATGTAGTTATGTAGTGTTGTGGACGAACACTCAAATGTCGAACAAGTGTGGTATGGAGATGAGGACTTATCCTCAATAAGAGCAAACTCTTGGTGAAGCTAAAGGGCTGGACAAATGAAATGATTATTTGAGATTTAGTGGCACTTTGTTGGAAGAAAGGATTGTTGTAACTATGACAAAAGTCCCGCATTGGGTAAACAGGGGGGAGATCATGGCTATAGCTCTAAGAGATGACTAGAGATGCTCATTTTTCCATAGGGATGCCCTAACGCGGCAGAGATTAGGGGTGGGAGTAGGGTGTTCTCTGTCCTTAGCCCATTCCCCGTCCATACCTTGGTTTCTTTATTTTTTTAGTATATATATTTATATATATAATCAACCCTCCATTTAAACTTTACAAAATATTATTTTCTTTTTCCTAAGGAAATTTTAAAAAATCTATTGTTGTGGTACCTTTTGGCTGAGACAAAAAAACTTGTCCAAGGTGAATAATACCATATCAATGTGTGGAGAGATACGGAAGGTTTTGTTGTCCCTAACAATTTGTTTCAGAGCCTTAAATTCTTAAGGGGCCTATGAGTAAGAATTAGTGAGATGTCCCCGAGGGAATTGAGTGATACACTTGTGAGAATTAAGTGAGATGTACTCAGGATCAAGCAACCTTTTTTCGCTGGCTCCACCTGTGTTTGATGGTGAAAACTACCAAGCCTATAAGAATGGAAGTCTCCATGGAAGGTTACGACTGGTTGGAAGCAATTGAGGAGGACTATGATGTTGCTCCACTTTTTAATAATTCATCAATAAACTGAATTGAAACTTACAAGGAAAAGGTCACCATGAAGGCAAAGGCTAGAGCTTGCCTACATGCAGCTTTGCCTTTTGCCATATTCAGCAGAATTATGGCCTTAAAGCCATCAAAGGAGATCTGGGAGTTCCTAAAAAATGAGTATGAAGGAGAGGAGAGAATTAAGGGCATGAAAGTGTCGAACCTGGTGAGTTGAATTCGAGAGAATGCAAATGAAGGATCCTGAGTTCATTATAAAATAAATTGAGAAAATCTACAATTTCATTCAATCACAACTCATAATAAATGCACTTTAATGTTACAATTAGCAATTTAATATAACTAAAATAGATAGAGTAGCTTGATTATCCACAAACACTTTCATATTTTCCTCTTTCTTTAAATTCAAGTTGCGCATCAACTTTTTCAACCATACTGCTCAGTTCACTACTGCTATTTCCGTAATGCTTCTGCAGTTGACTGGGATACTATATCTTACTTTTTTGAACACCATGAAAAACACCGTGAACAAATTGAAACAATACTAGAGGTTCTTTTCATCCAATGTCCTAATCCAATCAGTATATGAATAACACTGCAACTCAAAGCTATCAAATTTGTTGAATTTGATGCCAAAAGACAATGTGTCTTTCAAATATCTCAAAACCCTCTTTGTAACAACCATATGATTCTTGCTTGCATAATGAAGAAATATGGATAAGAAACTCATAGTCTATACGATGTCAAACACTTTAGGAGCTTACTGAAAGGAGGTTAATGTAGGTTCAAAATGATTTTGAGCTTCGAGCTCCAGAGAGAAACAAACAGACAAGTATTCTCAATAATTAAATAGATCATTTTACACTTTTTTGGAACATCTCTATTTTTTGTAGATAGGGATGTAAGGAAAAATTGAAAAATAAAATAACCAATTAAACCAACCAACAATTGCCACTATTACATGCACTCCTTTATCGCGGAGACCTTAGGCCCATAATGAATGCATCGAATCGACTAACTGGTTAGGATTGGTTTGGTTATGAACCATGGTGGTTTGGCTCAATTTTTATTTTTTTCTTCACATTTTTAGCGGTTCTACTTTGGTTTGGTGCTGAAATCAAACTGAACTGAACCTTTACACCCATACTTTCCAACAATAGTTACCACATATTACTCTCGAAGGGAGTAGCCACTTCTTACTCTACCATTGTTAGCTAGAGCTTCTACCGACTCTACCATTATTGTAGGGGTAGGGTGTTCATGACAAAGAAAGATCTTGAGATAGAACCACAAGACAGTTTGTAAAATGTATCCTTACCATAGAGATGCCTCACCAACTGTTTCAAAATATACCAAAGAGGAAAAAAGAACCCATCATATTTGCTTTGAGATTAGCTGGTGAAAAAAGGCCGGTTAGCCTTTTCAATTTGCTTCTTGCTCAAAGCACTTGAGAACCCAAGGAATTCGAGCCCTAGCTTTAGCCTTTTTGAACTTCCAAAGTTGCATGTACTATATTTGCTTCTAACAACCATGCCTTAAACAATTATCCACTATGTCACCATATTGAAGACTTGAACCTCCTAATGAAAAAAAACGATCTTCCAATTTATGAGGCGACACACTCGGTCCCAGTGTGCCCCTTCTGGAAAAAATCTCTTAAGTGCTTTTGCTATATCTCTAGCTACAGTTTCAACCAATGACTCTTGGCAGTTGTTAATTTTGTGAGGAACATATTTCACCAGCTTGGTCTTGAGAGTTGGTGTCTGGTGATATCACAGTCTTTTGTCGATACAGTGGACTTGGGCTCCTCCATGGCGCCTTCAATAGCCCAACCAAAGAAGGTTTCAGTGACTACTTTATCATTGGTTCATTTCAAGAACAAGAAGTCTTTCTCTTAAATGAATGGTTACTTCTCATTCTCAACTCTGCTGGTCTCCAAGTTCTTAATCACATGAAAGGGAACCCCACAAACATCTCCAGTCCATTCCAGTCTTCCCTATTCCATCTGTTGATCGACAAATTTCTCACATTATTCTCGCTCATGATCAACCTTGATTGGAAGACTCTTTTTTGTTATCCGTTTAGGCAGTGGTTTCCTCTTCACCGTTCTTTGATGTCTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTATTTTGTTTATTATTCAGTTTCTTATTAAGAAGGGAATCTTTCTAATATTCTCTCTATGGTGCTTGATTTCATTTTTCTGGATTGCTTTCATGAGTTACAGGCATGATTGACTTTTACTTATTTATTTATTTATTATGAATTGCCCTTTCCAGGAATTTGGGAGAACTGGGATGCACGCAGTCTCTTCTGTCCATGCACATCGTGGGTGCTACCTGCCTGACATCACACCTATGTGTTAGCGTACGGGCTTTTTGCGAGCTGTCTCACGGTACATTCTGCCGTTCTTGTCAGGATCGCTAGTATCCTCTTTGTGAGTCTTGCTTATGGGAAACATGAAAAACATATAGTAAATGTTTCTTCGTCATGTCATTGTTCACCATGGCCATCTTTATAGTCATGATGTCGTAATGTTTCAGCTAATTTTTGTGTTTGGATCATATGGTGTGGTATAACTGAAGCAGTTATTTTTATACCATTAAAATGTCATTTAATAAGAAGAAATTGGGATTGGGATTGATAGGAATGAATGGAAAAGATGGGTGATGCACGTGGACATTCTATCATTCGAAAGCAGGAGACTGTCGCAACATTTGTAGGTCCCTTTTTTTTTTGGCTTTTTGATTCTTTCCCCCTTTCTTTTCACTTTTAGCAGTATTCTATGTGCACTTTTCTAAACTTCATAAAAATTTTAGATATATGAAATGGCGATGGTGAGTATATGCATTGGAGGTGGGTGAAGAGGAAAGAGACACATCTATATGGGAAGACAGAAGGGAATGTTTGGTCCTGTTTGGTCAACTTAACTTCTTTTCTTCTTTTAGTTAATTTATTTAGTTCCTTCAATGGAGGAAATGAAGAAATATTGAGGTGTGATAATTAGTGAGTCAAATAAGTCGCTCACTTAAATTCTCTTAGAAAAATGTATTTGAGGTTGATGTGGGCATACATCTTCTAAGATTATTATCAAGGATGACGTTCAAACCTTCTGCCATGATGGATGATGCTTCAATTCAGTCATGCATAAAGATTTTGTGCTGACCTTCCTCGTTATACTTCCCTTGAAATTCTGGTCGTTGTTTTTTGCTAAGTGTACTGTTTAGCTGGAAATAAATGTACTAGAGGGTTCAGGAGCTTGATAACTTGCATACTCCGTTGTTTATTATTTCTGGGTCTCGTAATTTGAACTGAAATTAATACAAGCTTCTCTCTTCATCGTGTAAATCGTATACAAATACTATTCATTAGTACTGCATGATTTTACCCCTCTAGGTTTTCCTGGTTGAGGGAATTTCGGTTTGTAATTATGTCATATCTTGTAGCAGTTATTATTATTTACTGGTAGCGGTAGTCTATGTGATACAATATAATGAAAGAAACAAGGCTTTCATTAGATATGGAACCGTAGCGCATAACATTTTCGGTGGATGATATTTTTGTGATATCTTTCAGAGTCATGAAGCATTTCATCATTGAACAAGTGTTCTTTTCTTACAAAGAACTTGAATTAAAATTGTAAACTGTTCACGTGTTATCTAGTTCTTATTGCTTTTCCTTTTGCTTTACATTGCAGGTACTTGAGCGATCTCCAGTAGAAGCACACATGTGAGCAATTCTAATGGGGGTGAAGTTCAGTAGGGAGAGAGAATTTCTGGGTACTTTAGTAGGTTGGTAGATGCAATAAAAAATTTCCTAGCTGTTCAGGGAACTCATACTATTTTTCCACATAGTGTACCCGGTTGTCCTTTGGATTTCCTAAAATTATCAATTGTTGATTTGACCTGCTTTATTTCTTTATTACCTTCAATTACTTTCATTACAGTTACTGGATTTTGAGTCACGGTATAATATTCTTGTTTCTATTAGCTTTCTCAGTACCTTAAGCCGAAGAATTATAGATCTGGACACAGCTCAACAGAGAGAAATAATAATCCATCCACCTGTAAGTTTCCCACACAAAAATGACACGTTTTATTAATGTAGGCCTTTTACATAAAGTTTTTATTAATATATGCCTCTTACATAAAGTTATGTATATCTTAACACATTAATGCTTTCATATAATGAGAAACATATGTGGAGAGCTAGGATACAAACTTGTATTTTCATTTTTCGTATCTTCCAAGTGAATTATATTTGTTCGTGGGACATGAACTTTTCAACAACCAATTAGAGTCGAGTGTGTCACAGTTTGAATGGAACAGTTCAAACCACATATTCAACAATAGACACGAAGTTCGAATCAGGTATGCTTTCTAAATGCTTGTCTGTATTCAGCTTTCAAGGGCTTAAAAATGAGATTGGTGTTGAGTGGCTGTTGTAGCTCAGCTCTTATTTGAAATCCAATCCATGTTGTAGGTGGGAACGCAATAGCAACAGCCACATGGGGTGCCAATGCCGATTTGATTGACACTAACATGTCAATGTTTTTAAAGCCAGGTTTATGGTTTATGGTTTCATTTGGTCCACAATGCAATGCCACTCGTGGCTTGCTGCAGGAGCATTTGGAGATCGTTGTTGATTTTCATGGCCCATAGCCTTAAGCTTAGCTGGTGTTGTTCCCTACAACCGGACTGGCCCTCCTGCTTCCCTCTGATAAAAACTTGTTAGGGAAACCCAAAAGACACCTTCAAGCCCCATGACTTATTCCTTCCAACCCCCACAAGGAACTTGATTGAAAATGGTAACAGGGTGAGGACAGACAGAGATAGTCTCTCGGGTCTCAATGGCTGACCCGTCCAAGTTTAATCTCCGTCTGTACCAGCTAGTTTTATAGAATGTGGGGACGAGTTTGAAGATTTCTCCCTTAGGATTTGAATTTTTCTTTATTGTCAAGTAGGAAAACCTCTGATCTCTCGATTAAGAATAATTAGATGAATTATGTTCTAGTTTGAATTCTTTGAAGGGTAGAATTCGAACACTTTTAGCTACTATTCAAACAGTTTACATCCTTTAGACTAAAAAGTGGTTGATTTTGTTAGTGGAGGGCTTAGATCAATGGTTGGAAGGATGGAGAGATATTTCCAACCTCAAAATATAAAAACTCTCTCCCTCTCTCTCACTTATTGGATGTCCAATATACAGAAAAGGACTGCCCCAGTTAGAAAGTAAGTGCACTTATAAAGCTGAGAAGATCCACTGCCCACTAGACTGTCCATCTTTTGATCATCATCCCCATCATTTACAAACCTTTATTCAAAGCTTAGCTACTTCCATCGTCATCAAATAGTAATTCATATTTTTTTTATCATGATTTAGTTTCATTTTCTCTGTACTTTAGCATTGTCTCATATTAATATAATATGAATTTGTGTTCTCAAGCTTTCTTTGATCTTAAAACTATGATTTAATGTGACTTAATGTAAAGTAGATGTCGTCAATTACTGGACAAACTAATTGGTTCTAT

mRNA sequence

TGTTATTTAAAATAACTTATTTCTTTAAATTTTTTTTTTTTTTTTATAAAAAAAGATCATTAAATTTACAGAAATCAGATCGGGCCGTCTGATTTCAATCATGCGGTGTATCATGCATAAGCCACATTCAAATCCATAGAATGCAATCCACCGTAGCATTTCTCTAGTAGGCATCCGTACCCTCGTAAAACCCTTGCTGAGCGCTGCTCATTGTGTGCGCTAAACCTCGACATCGGCTCGTCTTGCTGAATTTTGATCGAACGAAGACCTGCACTGCTAAAATGGCTTGGCGCCCTTCTGGATCTCTATCTCGCTCCCTGATTTCTACTGTTAGGGCTTCTTCTCTCCGATCAGCTCCTTCTCTTCCTCGGCTCCACCCACCACCTCTCGCCGCTCGACCTCGTCTTCAATCTCGTCGGCTTTCATTTTCAACTTCCAGGAATTTGGGAGAACTGGGATGCACGCAGTCTCTTCTGTCCATGCACATCGTGGGTGCTACCTGCCTGACATCACACCTATGTGTTAGCGTACGGGCTTTTTGCGAGCTGTCTCACGGTACATTCTGCCGTTCTTGTCAGGATCGCTATCATGATGTCGTAATGTTTCAGCTAATTTTTGTGTTTGGATCATATGGTGTGGTACTTGAGCGATCTCCAGTAGAAGCACACATTTTGAATGGAACAGTTCAAACCACATATTCAACAATAGACACGAAGTTCGAATCAGGTGGGAACGCAATAGCAACAGCCACATGGGGTGCCAATGCCGATTTGATTGACACTAACATGTCAATGTTTTTAAAGCCAGGTTTATGGTTTATGGTTTCATTTGGTCCACAATGCAATGCCACTCGTGGCTTGCTGCAGGAGCATTTGGAGATCGTTGTTGATTTTCATGGCCCATAGCCTTAAGCTTAGCTGGTGTTGTTCCCTACAACCGGACTGGCCCTCCTGCTTCCCTCTGATAAAAACTTGTTAGGGAAACCCAAAAGACACCTTCAAGCCCCATGACTTATTCCTTCCAACCCCCACAAGGAACTTGATTGAAAATGGTAACAGGGTGAGGACAGACAGAGATAGTCTCTCGGGTCTCAATGGCTGACCCGTCCAAGTTTAATCTCCGTCTGTACCAGCTAGTTTTATAGAATGTGGGGACGAGTTTGAAGATTTCTCCCTTAGGATTTGAATTTTTCTTTATTGTCAAGTAGGAAAACCTCTGATCTCTCGATTAAGAATAATTAGATGAATTATGTTCTAGTTTGAATTCTTTGAAGGGTAGAATTCGAACACTTTTAGCTACTATTCAAACAGTTTACATCCTTTAGACTAAAAAGTGGTTGATTTTGTTAGTGGAGGGCTTAGATCAATGGTTGGAAGGATGGAGAGATATTTCCAACCTCAAAATATAAAAACTCTCTCCCTCTCTCTCACTTATTGGATGTCCAATATACAGAAAAGGACTGCCCCAGTTAGAAAGTAAGTGCACTTATAAAGCTGAGAAGATCCACTGCCCACTAGACTGTCCATCTTTTGATCATCATCCCCATCATTTACAAACCTTTATTCAAAGCTTAGCTACTTCCATCGTCATCAAATAGTAATTCATATTTTTTTTATCATGATTTAGTTTCATTTTCTCTGTACTTTAGCATTGTCTCATATTAATATAATATGAATTTGTGTTCTCAAGCTTTCTTTGATCTTAAAACTATGATTTAATGTGACTTAATGTAAAGTAGATGTCGTCAATTACTGGACAAACTAATTGGTTCTAT

Coding sequence (CDS)

ATGGCTTGGCGCCCTTCTGGATCTCTATCTCGCTCCCTGATTTCTACTGTTAGGGCTTCTTCTCTCCGATCAGCTCCTTCTCTTCCTCGGCTCCACCCACCACCTCTCGCCGCTCGACCTCGTCTTCAATCTCGTCGGCTTTCATTTTCAACTTCCAGGAATTTGGGAGAACTGGGATGCACGCAGTCTCTTCTGTCCATGCACATCGTGGGTGCTACCTGCCTGACATCACACCTATGTGTTAGCGTACGGGCTTTTTGCGAGCTGTCTCACGGTACATTCTGCCGTTCTTGTCAGGATCGCTATCATGATGTCGTAATGTTTCAGCTAATTTTTGTGTTTGGATCATATGGTGTGGTACTTGAGCGATCTCCAGTAGAAGCACACATTTTGAATGGAACAGTTCAAACCACATATTCAACAATAGACACGAAGTTCGAATCAGGTGGGAACGCAATAGCAACAGCCACATGGGGTGCCAATGCCGATTTGATTGACACTAACATGTCAATGTTTTTAAAGCCAGGTTTATGGTTTATGGTTTCATTTGGTCCACAATGCAATGCCACTCGTGGCTTGCTGCAGGAGCATTTGGAGATCGTTGTTGATTTTCATGGCCCATAG

Protein sequence

MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLLSMHIVGATCLTSHLCVSVRAFCELSHGTFCRSCQDRYHDVVMFQLIFVFGSYGVVLERSPVEAHILNGTVQTTYSTIDTKFESGGNAIATATWGANADLIDTNMSMFLKPGLWFMVSFGPQCNATRGLLQEHLEIVVDFHGP
Homology
[Close]
BLAST of Cp4.1LG01g02370 vs. TrEMBL
Match: A0A0A0LBV2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199040 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.9e-35
Identity = 82/101 (81.19%), Postives = 86/101 (85.15%), Query Frame = 1 

Query: 1   MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSRNLGELGC 60
           MAWR SGSLSRSLIST+R SSLRS PSLPRL PPPL +RP LQSRR SFS SRNLGELGC
Sbjct: 57  MAWRSSGSLSRSLISTLRPSSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 116

Query: 61  TQSLLSMHIVGATCLTSHLCVSVRAFCELSHGTFCRSCQDR 102
           T SLL M  +G TCLTSHLCV VRAFCELSHGTF R+CQDR
Sbjct: 117 THSLLPM--LGTTCLTSHLCVDVRAFCELSHGTFYRTCQDR 155

[Close]
BLAST of Cp4.1LG01g02370 vs. TrEMBL
Match: A0A0D2PMI7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G021900 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.4e-29
Identity = 72/102 (70.59%), Postives = 82/102 (80.39%), Query Frame = 1 

Query: 1   MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSRNLGELGC 60
           MAWR +GSLSRS++S  RA SLR+ P +PR+ PP  +A PRLQSRRLSF+ SRNLGELGC
Sbjct: 1   MAWRGAGSLSRSVMSAARAPSLRTPPPMPRVRPPTSSA-PRLQSRRLSFAPSRNLGELGC 60

Query: 61  TQSLLSMH-IVGATCLTSHLCVSVRAFCELSHGTFCRSCQDR 102
            QS L +H +V   CLTSHL VSVRA CELSHGTFCRSCQDR
Sbjct: 61  VQSFLPLHNLVPMACLTSHLTVSVRACCELSHGTFCRSCQDR 101

[Close]
BLAST of Cp4.1LG01g02370 vs. TrEMBL
Match: A0A0D2NHH7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G234400 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.0e-28
Identity = 71/102 (69.61%), Postives = 82/102 (80.39%), Query Frame = 1 

Query: 1   MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSRNLGELGC 60
           MAWR +GSLSRS+IS  RA SLRS P LPRL P  +++ PRLQSRRLS++ SRNLGELGC
Sbjct: 1   MAWRSAGSLSRSVISAARAPSLRSPPPLPRLRPS-VSSAPRLQSRRLSYAPSRNLGELGC 60

Query: 61  TQSLLSMH-IVGATCLTSHLCVSVRAFCELSHGTFCRSCQDR 102
            QS L +H +V   CLTSHL V+VRA CELSHGTFCR+CQDR
Sbjct: 61  VQSFLPLHSMVPTACLTSHLTVNVRACCELSHGTFCRTCQDR 101

[Close]
BLAST of Cp4.1LG01g02370 vs. TrEMBL
Match: M5VJ60_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013214mg PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.5e-27
Identity = 68/102 (66.67%), Postives = 78/102 (76.47%), Query Frame = 1 

Query: 1   MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSRNLGELGC 60
           MAWR +GSLSRSL+ST R SSLRSAP L RL PP ++       RRL+F++ RNLGELGC
Sbjct: 39  MAWRSAGSLSRSLVSTARVSSLRSAPPLRRLRPPTVST-----PRRLAFASPRNLGELGC 98

Query: 61  TQSLLSMH-IVGATCLTSHLCVSVRAFCELSHGTFCRSCQDR 102
            QSLL MH +  ATCLTSHL V+ R  CELSHGTFCR+CQDR
Sbjct: 99  IQSLLPMHSVTAATCLTSHLAVNARGCCELSHGTFCRTCQDR 135

[Close]
BLAST of Cp4.1LG01g02370 vs. TrEMBL
Match: A0A151U7L7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_008038 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.5e-26
Identity = 73/103 (70.87%), Postives = 81/103 (78.64%), Query Frame = 1 

Query: 1   MAWRPSGSLSRSLISTVRASSLRSAPS-LPRLHPPPLAARPRLQSRRLSFSTSRNLGELG 60
           MAWR S SLSRS+IST RAS   +APS LPRL PPPLAA PR+QSRR S   SRNLG+LG
Sbjct: 1   MAWR-SASLSRSVISTARASLRPAAPSPLPRLRPPPLAA-PRVQSRRFSMPASRNLGQLG 60

Query: 61  CTQSLLSMH-IVGATCLTSHLCVSVRAFCELSHGTFCRSCQDR 102
           CTQSLL +H  +  TC+TSH+ VS RA CELSHGTF RSCQDR
Sbjct: 61  CTQSLLPLHSTMAITCMTSHVAVSARACCELSHGTFRRSCQDR 101

[Close]
BLAST of Cp4.1LG01g02370 vs. TAIR10
Match: AT2G15000.4 (AT2G15000.4 unknown protein)

HSP 1 Score: 98.6 bits (244), Expect = 4.8e-21
Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = 1 

Query: 1   MAWRPSGSLSRSLIS-TVRASSLRS-APSLPRLHPPPLAARPRLQSRRLSFST-SRNLGE 60
           MAWR +GS +RS +S T R+ SLRS   +LPRL PP    +  L SRR +FS+ SRNLG 
Sbjct: 1   MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPP----QSSLPSRRFTFSSPSRNLGA 60

Query: 61  LGCTQSLLSMHIVGATC-LTSHLCVSVRAFCELSHGTFCRSCQDR 102
           LGCTQS L ++ V AT  LTSHL V++RAFCELS+GTF R+CQDR
Sbjct: 61  LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGTFQRTCQDR 101

[Close]
BLAST of Cp4.1LG01g02370 vs. TAIR10
Match: AT4G34265.1 (AT4G34265.1 unknown protein)

HSP 1 Score: 74.3 bits (181), Expect = 9.7e-14
Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 1 

Query: 1  MAWRPSGSLSRSLIS-TVRASSLRSAP-SLPRLHPPPLAARPRLQSRRLSFSTSRNLGEL 60
          MAWR   S +RS +S T RA SLRS P +LPRL P   ++ PR   R  SF+  RNLGEL
Sbjct: 1  MAWR---SAARSFVSATARAPSLRSPPPTLPRLRPSQ-SSLPR--RRFASFTNPRNLGEL 60

Query: 61 GCTQSLLSMH-IVGATCLTSHLCVSVRAFCELSHG 93
          GCT+S L ++ +V A  LTSHL V++RAFCELS+G
Sbjct: 61 GCTESFLPLYNVVAAARLTSHLNVNLRAFCELSNG 89

[Close]
BLAST of Cp4.1LG01g02370 vs. NCBI nr
Match: gi|449445920|ref|XP_004140720.1| (PREDICTED: uncharacterized protein LOC101202763 isoform X1 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 4.2e-35
Identity = 82/101 (81.19%), Postives = 86/101 (85.15%), Query Frame = 1 

Query: 1   MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSRNLGELGC 60
           MAWR SGSLSRSLIST+R SSLRS PSLPRL PPPL +RP LQSRR SFS SRNLGELGC
Sbjct: 50  MAWRSSGSLSRSLISTLRPSSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 109

Query: 61  TQSLLSMHIVGATCLTSHLCVSVRAFCELSHGTFCRSCQDR 102
           T SLL M  +G TCLTSHLCV VRAFCELSHGTF R+CQDR
Sbjct: 110 THSLLPM--LGTTCLTSHLCVDVRAFCELSHGTFYRTCQDR 148

[Close]
BLAST of Cp4.1LG01g02370 vs. NCBI nr
Match: gi|700202358|gb|KGN57491.1| (hypothetical protein Csa_3G199040 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 4.2e-35
Identity = 82/101 (81.19%), Postives = 86/101 (85.15%), Query Frame = 1 

Query: 1   MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSRNLGELGC 60
           MAWR SGSLSRSLIST+R SSLRS PSLPRL PPPL +RP LQSRR SFS SRNLGELGC
Sbjct: 57  MAWRSSGSLSRSLISTLRPSSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 116

Query: 61  TQSLLSMHIVGATCLTSHLCVSVRAFCELSHGTFCRSCQDR 102
           T SLL M  +G TCLTSHLCV VRAFCELSHGTF R+CQDR
Sbjct: 117 THSLLPM--LGTTCLTSHLCVDVRAFCELSHGTFYRTCQDR 155

[Close]
BLAST of Cp4.1LG01g02370 vs. NCBI nr
Match: gi|449445924|ref|XP_004140722.1| (PREDICTED: uncharacterized protein LOC101202763 isoform X3 [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 4.8e-31
Identity = 76/93 (81.72%), Postives = 79/93 (84.95%), Query Frame = 1 

Query: 1   MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSRNLGELGC 60
           MAWR SGSLSRSLIST+R SSLRS PSLPRL PPPL +RP LQSRR SFS SRNLGELGC
Sbjct: 50  MAWRSSGSLSRSLISTLRPSSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 109

Query: 61  TQSLLSMHIVGATCLTSHLCVSVRAFCELSHGT 94
           T SLL M  +G TCLTSHLCV VRAFCELSHGT
Sbjct: 110 THSLLPM--LGTTCLTSHLCVDVRAFCELSHGT 140

[Close]
BLAST of Cp4.1LG01g02370 vs. NCBI nr
Match: gi|449445922|ref|XP_004140721.1| (PREDICTED: uncharacterized protein LOC101202763 isoform X2 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 1.8e-30
Identity = 75/92 (81.52%), Postives = 78/92 (84.78%), Query Frame = 1 

Query: 1   MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSRNLGELGC 60
           MAWR SGSLSRSLIST+R SSLRS PSLPRL PPPL +RP LQSRR SFS SRNLGELGC
Sbjct: 50  MAWRSSGSLSRSLISTLRPSSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 109

Query: 61  TQSLLSMHIVGATCLTSHLCVSVRAFCELSHG 93
           T SLL M  +G TCLTSHLCV VRAFCELSHG
Sbjct: 110 THSLLPM--LGTTCLTSHLCVDVRAFCELSHG 139

[Close]
BLAST of Cp4.1LG01g02370 vs. NCBI nr
Match: gi|823203443|ref|XP_012436143.1| (PREDICTED: uncharacterized protein LOC105762789 isoform X1 [Gossypium raimondii])

HSP 1 Score: 136.0 bits (341), Expect = 7.7e-29
Identity = 72/102 (70.59%), Postives = 82/102 (80.39%), Query Frame = 1 

Query: 1   MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSRNLGELGC 60
           MAWR +GSLSRS++S  RA SLR+ P +PR+ PP  +A PRLQSRRLSF+ SRNLGELGC
Sbjct: 1   MAWRGAGSLSRSVMSAARAPSLRTPPPMPRVRPPTSSA-PRLQSRRLSFAPSRNLGELGC 60

Query: 61  TQSLLSMH-IVGATCLTSHLCVSVRAFCELSHGTFCRSCQDR 102
            QS L +H +V   CLTSHL VSVRA CELSHGTFCRSCQDR
Sbjct: 61  VQSFLPLHNLVPMACLTSHLTVSVRACCELSHGTFCRSCQDR 101

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g02370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g02370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBV2_CUCSA2.9e-3581.19Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199040 PE=4 SV=1[more]
A0A0D2PMI7_GOSRA5.4e-2970.59Uncharacterized protein OS=Gossypium raimondii GN=B456_008G021900 PE=4 SV=1[more]
A0A0D2NHH7_GOSRA2.0e-2869.61Uncharacterized protein OS=Gossypium raimondii GN=B456_005G234400 PE=4 SV=1[more]
M5VJ60_PRUPE6.5e-2766.67Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013214mg PE=4 SV=1[more]
A0A151U7L7_CAJCA5.5e-2670.87Uncharacterized protein OS=Cajanus cajan GN=KK1_008038 PE=4 SV=1[more]
BLAST of Cp4.1LG01g02370 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G15000.44.8e-2160.00 unknown protein[more]
AT4G34265.19.7e-1455.79 unknown protein[more]
BLAST of Cp4.1LG01g02370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445920|ref|XP_004140720.1|4.2e-3581.19PREDICTED: uncharacterized protein LOC101202763 isoform X1 [Cucumis sativus][more]
gi|700202358|gb|KGN57491.1|4.2e-3581.19hypothetical protein Csa_3G199040 [Cucumis sativus][more]
gi|449445924|ref|XP_004140722.1|4.8e-3181.72PREDICTED: uncharacterized protein LOC101202763 isoform X3 [Cucumis sativus][more]
gi|449445922|ref|XP_004140721.1|1.8e-3081.52PREDICTED: uncharacterized protein LOC101202763 isoform X2 [Cucumis sativus][more]
gi|823203443|ref|XP_012436143.1|7.7e-2970.59PREDICTED: uncharacterized protein LOC105762789 isoform X1 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0004560 alpha-L-fucosidase activity
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g02370.1Cp4.1LG01g02370.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33156FAMILY NOT NAMEDcoord: 1..106
score: 6.4
NoneNo IPR availablePANTHERPTHR33156:SF7SUBFAMILY NOT NAMEDcoord: 1..106
score: 6.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g02370Cucsa.219380Cucumber (Gy14) v1cgycpeB0599
Cp4.1LG01g02370CmaCh11G017190Cucurbita maxima (Rimu)cmacpeB136
Cp4.1LG01g02370CmaCh04G004670Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g02370CmoCh11G013970Cucurbita moschata (Rifu)cmocpeB114
Cp4.1LG01g02370CmoCh04G004980Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g02370Cla016072Watermelon (97103) v1cpewmB453
Cp4.1LG01g02370Csa7G071630Cucumber (Chinese Long) v2cpecuB470
Cp4.1LG01g02370Csa3G199040Cucumber (Chinese Long) v2cpecuB389
Cp4.1LG01g02370MELO3C018498Melon (DHL92) v3.5.1cpemeB394
Cp4.1LG01g02370ClCG02G006540Watermelon (Charleston Gray)cpewcgB378
Cp4.1LG01g02370ClCG05G010360Watermelon (Charleston Gray)cpewcgB394
Cp4.1LG01g02370CSPI07G07100Wild cucumber (PI 183967)cpecpiB470
Cp4.1LG01g02370CSPI03G18070Wild cucumber (PI 183967)cpecpiB388
Cp4.1LG01g02370Lsi03G005510Bottle gourd (USVL1VR-Ls)cpelsiB348
Cp4.1LG01g02370Lsi05G002440Bottle gourd (USVL1VR-Ls)cpelsiB369
Cp4.1LG01g02370MELO3C018498.2Melon (DHL92) v3.6.1cpemedB457
Cp4.1LG01g02370MELO3C031999.2Melon (DHL92) v3.6.1cpemedB481
Cp4.1LG01g02370CsaV3_7G008070Cucumber (Chinese Long) v3cpecucB0582
Cp4.1LG01g02370CsaV3_3G018130Cucumber (Chinese Long) v3cpecucB0484
Cp4.1LG01g02370Bhi05G000992Wax gourdcpewgoB0524
Cp4.1LG01g02370Bhi01G001290Wax gourdcpewgoB0517
Cp4.1LG01g02370CsGy3G017980Cucumber (Gy14) v2cgybcpeB362
Cp4.1LG01g02370Carg19672Silver-seed gourdcarcpeB0408
Cp4.1LG01g02370Carg08138Silver-seed gourdcarcpeB0527
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g02370Cp4.1LG04g07840Cucurbita pepo (Zucchini)cpecpeB400
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g02370Wax gourdcpewgoB0539
Cp4.1LG01g02370Wax gourdcpewgoB0547
Cp4.1LG01g02370Wax gourdcpewgoB0580
Cp4.1LG01g02370Cucurbita pepo (Zucchini)cpecpeB234
Cp4.1LG01g02370Cucumber (Gy14) v1cgycpeB0218
Cp4.1LG01g02370Cucurbita maxima (Rimu)cmacpeB351
Cp4.1LG01g02370Cucurbita moschata (Rifu)cmocpeB311
Cp4.1LG01g02370Cucurbita moschata (Rifu)cmocpeB815
Cp4.1LG01g02370Cucumber (Chinese Long) v2cpecuB468
Cp4.1LG01g02370Bottle gourd (USVL1VR-Ls)cpelsiB325
Cp4.1LG01g02370Watermelon (97103) v1cpewmB433
Cp4.1LG01g02370Melon (DHL92) v3.5.1cpemeB412
Cp4.1LG01g02370Melon (DHL92) v3.5.1cpemeB435
Cp4.1LG01g02370Cucumber (Gy14) v2cgybcpeB213
Cp4.1LG01g02370Cucumber (Gy14) v2cgybcpeB515
Cp4.1LG01g02370Cucumber (Gy14) v2cgybcpeB805
Cp4.1LG01g02370Melon (DHL92) v3.6.1cpemedB472
Cp4.1LG01g02370Melon (DHL92) v3.6.1cpemedB492
Cp4.1LG01g02370Melon (DHL92) v3.6.1cpemedB507
Cp4.1LG01g02370Cucumber (Chinese Long) v3cpecucB0481
Cp4.1LG01g02370Cucumber (Chinese Long) v3cpecucB0511
Cp4.1LG01g02370Cucumber (Chinese Long) v3cpecucB0576