Carg19672 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTGGCGCTCTTCTGGATCTCTATCTCGCGCGCTCATTTCCTCTGTTAGGTCTTCTTCTCTCCGATCGTCTCCTTCTCTTCCTCGGCTTCGCCTGCCACCTATCACCGCTCGACCTCGCCTTCAATCTCGTCGCCTTTCATTTTCGACTTCCAGGTACTACACAAGTTTCTAAACTCGCTGCTTGGTTTCCTTGCGAAACGAATCGACGAACGAATTACTGAGGAATAGATGCCGTTGAATTGTGATTTATTTGATGCTCGATGTTCGTTCTTTTTGCCGTGTTGATCTCTGTTTACTATTGATTTCGGCTTTTGTAAATTTAGAATCATTTGGAGGTTGAATTTCTGTTGTTTATGTTTTTATCTTAATTTCAGATTAATTTTAATGCATTTTGAAGTTTTTGTTATCTGTGAAGTTATTTGTGATTGCGTTGTAAAAGAGTTGCATAAATCTTGTTAGCAATTATCCTTTACATTCCGACGCAACACTAGACTCGACCATTTTTCAGAATTATCACCGCAGGAAACAGCCTATCAAGTTTCTTATTATCTTAATTAAGGCCTTCTCAACTCTGCTGAGCTCAAAGGTTAATCACACGAACAGGAACCCCACCAATATTTCCAGAGTCTTCCCTATTCCATCTGATTTTTGAAAAATTCATCACATTATTACTTATGATCTTGTCTCTCTCTTGATCATCTTTGATTGGAAGGCTCTTTTCTGAGGTGCTTGATTGCAAATTTCTTGATTTCTTTCGTGAGTTGGTGCCACAGTTTACTCGTTTTTGTTTCAAATTGTCGTTTCCAGGAATTTGGGAGAACTGGGATGCACACAGTCTCTTCTGCCCATGCACAGCATCATGGGTGCTACCTGCCTGACATCACACCTCTGTGTTAGCGCGCGGGCTTTTTGCGAGCTTTCTCATGGTACCTTCTGCCGTACTTGTCAGGATCGCTAGTATCCTTCTGTGAGTTTTGTTTATAGGAAACATGAAAAACATATTGGAATCGTTTCTTCGTAAAGTAATTATTTAGTGCGACCATCGCTATAATCATCACGAAGTCATAACTTGTCAGTGAATTTGTGTTTGGATCATATGATGTGGCATTACTAAGCAGTTATTTTTATACCATTAAAATGTGATTTGGTAAGAAGAAATTGGATTGGGATGATAGGAAGGAATGGAAAAGATGGGTGATGCACGAGGACATTCTATTATTGGCAAGCCGGAGATCGTCACAACAGTTGTAGGTCCCTTTTCTGACATTTTTATTC ATGGCTTGGCGCTCTTCTGGATCTCTATCTCGCGCGCTCATTTCCTCTGTTAGGTCTTCTTCTCTCCGATCGTCTCCTTCTCTTCCTCGGCTTCGCCTGCCACCTATCACCGCTCGACCTCGCCTTCAATCTCGTCGCCTTTCATTTTCGACTTCCAGGAATTTGGGAGAACTGGGATGCACACAGTCTCTTCTGCCCATGCACAGCATCATGGGTGCTACCTGCCTGACATCACACCTCTGTGTTAGCGCGCGGGCTTTTTGCGAGCTTTCTCATGGAAGGAATGGAAAAGATGGGTGATGCACGAGGACATTCTATTATTGGCAAGCCGGAGATCGTCACAACAGTTGTAGGTCCCTTTTCTGACATTTTTATTC ATGGCTTGGCGCTCTTCTGGATCTCTATCTCGCGCGCTCATTTCCTCTGTTAGGTCTTCTTCTCTCCGATCGTCTCCTTCTCTTCCTCGGCTTCGCCTGCCACCTATCACCGCTCGACCTCGCCTTCAATCTCGTCGCCTTTCATTTTCGACTTCCAGGAATTTGGGAGAACTGGGATGCACACAGTCTCTTCTGCCCATGCACAGCATCATGGGTGCTACCTGCCTGACATCACACCTCTGTGTTAGCGCGCGGGCTTTTTGCGAGCTTTCTCATGGAAGGAATGGAAAAGATGGGTGA MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPPITARPRLQSRRLSFSTSRNLGELGCTQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG
BLAST of Carg19672 vs. NCBI nr
Match: XP_022984256.1 (uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984257.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984259.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984260.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984261.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984262.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984263.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984264.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984265.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984266.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984267.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima]) HSP 1 Score: 185.3 bits (469), Expect = 1.0e-43 Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0
BLAST of Carg19672 vs. NCBI nr
Match: XP_023551740.1 (uncharacterized protein LOC111809622 isoform X3 [Cucurbita pepo subsp. pepo] >XP_023551741.1 uncharacterized protein LOC111809622 isoform X3 [Cucurbita pepo subsp. pepo] >XP_023551742.1 uncharacterized protein LOC111809622 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 176.4 bits (446), Expect = 4.8e-41 Identity = 93/99 (93.94%), Postives = 94/99 (94.95%), Query Frame = 0
BLAST of Carg19672 vs. NCBI nr
Match: XP_022922831.1 (uncharacterized protein LOC111430696 isoform X2 [Cucurbita moschata] >XP_022922832.1 uncharacterized protein LOC111430696 isoform X2 [Cucurbita moschata]) HSP 1 Score: 175.6 bits (444), Expect = 8.1e-41 Identity = 93/99 (93.94%), Postives = 94/99 (94.95%), Query Frame = 0
BLAST of Carg19672 vs. NCBI nr
Match: XP_022984268.1 (uncharacterized protein LOC111482625 isoform X3 [Cucurbita maxima]) HSP 1 Score: 171.8 bits (434), Expect = 1.2e-39 Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0
BLAST of Carg19672 vs. NCBI nr
Match: XP_022984255.1 (uncharacterized protein LOC111482625 isoform X1 [Cucurbita maxima]) HSP 1 Score: 171.8 bits (434), Expect = 1.2e-39 Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0
BLAST of Carg19672 vs. TAIR10
Match: AT4G34265.1 (unknown protein) HSP 1 Score: 65.1 bits (157), Expect = 2.8e-11 Identity = 45/100 (45.00%), Postives = 59/100 (59.00%), Query Frame = 0
BLAST of Carg19672 vs. TAIR10
Match: AT2G15000.4 (unknown protein) HSP 1 Score: 59.7 bits (143), Expect = 1.2e-09 Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 0
BLAST of Carg19672 vs. TAIR10
Match: AT4G17310.1 (unknown protein) HSP 1 Score: 44.3 bits (103), Expect = 5.1e-05 Identity = 24/45 (53.33%), Postives = 29/45 (64.44%), Query Frame = 0
BLAST of Carg19672 vs. TrEMBL
Match: tr|A0A1U8JMY8|A0A1U8JMY8_GOSHI (uncharacterized protein LOC107908868 isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107908868 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 2.8e-29 Identity = 70/99 (70.71%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of Carg19672 vs. TrEMBL
Match: tr|A0A2P5EYL7|A0A2P5EYL7_9ROSA (Caspase-6 protein OS=Trema orientalis OX=63057 GN=TorRG33x02_136760 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 5.8e-27 Identity = 68/93 (73.12%), Postives = 78/93 (83.87%), Query Frame = 0
BLAST of Carg19672 vs. TrEMBL
Match: tr|A0A2C9V4D4|A0A2C9V4D4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G075200 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 5.8e-27 Identity = 70/99 (70.71%), Postives = 79/99 (79.80%), Query Frame = 0
BLAST of Carg19672 vs. TrEMBL
Match: tr|F6H6A0|F6H6A0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_03s0091g00250 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 9.9e-27 Identity = 68/99 (68.69%), Postives = 81/99 (81.82%), Query Frame = 0
BLAST of Carg19672 vs. TrEMBL
Match: tr|A0A2I4DQH0|A0A2I4DQH0_9ROSI (uncharacterized protein LOC108982466 isoform X2 OS=Juglans regia OX=51240 GN=LOC108982466 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.2e-26 Identity = 71/101 (70.30%), Postives = 85/101 (84.16%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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