Cp4.1LG01g02340 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g02340
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMYB-related transcription factor
LocationCp4.1LG01 : 2444681 .. 2445379 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGTCTGAAGAGTGGGACATCGATCGGGTCAAGGGCCCATGGAGCCCGGAGGAAGACCAGTTGCTAAGGATTCTAGTGCAGCGCTACGGCGCTCGGAACTGGTCTGTTATCGGTCAGTCGATTCAAGGCCGGTCGGGGAAATCCTGCCGTCTGCGGTGGTTTAATCAGCTCTGTCCTGACGTGGAGCGCCAGGCGTTCACTGCGGAGGAGGACGAGGTCATCGTCGAAGCACACGCTAAGCACGGGAACAAGTGGGCGACAATCGCGAGACTACTCAACGGACGCACAGACAACGCGATTAAGAATCACTGGAATTCAACATTGAAGCGTAAGTTCTCTTCGATTGCTGAGATTAAAACTGAGTGTATGAGTCATGGATCGACGATTTCGATTGGAAATCAGTGTTTGAGTCCATCGAGATCGGATACGAACGATTCGATTCCGAGTCAGAACAAAAGGCCTTCGACTCGTCTAAGCCTATCTCTTCCAGGAACAGAATCATCACCTCCGCGACCGCAGCAGCAGAGTATTTCATCATTGCCGGAGGATCGTGAGGCGAAAGCGAAATCGGCGCGTTGTGGTAAGGAATTTCTGTCTGTAATGCAATTGATGATTAGAGAAGAGGTGAGGAATTACATAGCGGAGTATAGAAAACGGCAACGAATGAATGAGGAAGAAGATAGAAAGGCAGGGTAA

mRNA sequence

ATGACGTCTGAAGAGTGGGACATCGATCGGGTCAAGGGCCCATGGAGCCCGGAGGAAGACCAGTTGCTAAGGATTCTAGTGCAGCGCTACGGCGCTCGGAACTGGTCTGTTATCGGTCAGTCGATTCAAGGCCGGTCGGGGAAATCCTGCCGTCTGCGGTGGTTTAATCAGCTCTGTCCTGACGTGGAGCGCCAGGCGTTCACTGCGGAGGAGGACGAGGTCATCGTCGAAGCACACGCTAAGCACGGGAACAAGTGGGCGACAATCGCGAGACTACTCAACGGACGCACAGACAACGCGATTAAGAATCACTGGAATTCAACATTGAAGCGTAAGTTCTCTTCGATTGCTGAGATTAAAACTGAGTGTATGAGTCATGGATCGACGATTTCGATTGGAAATCAGTGTTTGAGTCCATCGAGATCGGATACGAACGATTCGATTCCGAGTCAGAACAAAAGGCCTTCGACTCGTCTAAGCCTATCTCTTCCAGGAACAGAATCATCACCTCCGCGACCGCAGCAGCAGAGTATTTCATCATTGCCGGAGGATCGTGAGGCGAAAGCGAAATCGGCGCGTTGTGGTAAGGAATTTCTGTCTGTAATGCAATTGATGATTAGAGAAGAGGTGAGGAATTACATAGCGGAGTATAGAAAACGGCAACGAATGAATGAGGAAGAAGATAGAAAGGCAGGGTAA

Coding sequence (CDS)

ATGACGTCTGAAGAGTGGGACATCGATCGGGTCAAGGGCCCATGGAGCCCGGAGGAAGACCAGTTGCTAAGGATTCTAGTGCAGCGCTACGGCGCTCGGAACTGGTCTGTTATCGGTCAGTCGATTCAAGGCCGGTCGGGGAAATCCTGCCGTCTGCGGTGGTTTAATCAGCTCTGTCCTGACGTGGAGCGCCAGGCGTTCACTGCGGAGGAGGACGAGGTCATCGTCGAAGCACACGCTAAGCACGGGAACAAGTGGGCGACAATCGCGAGACTACTCAACGGACGCACAGACAACGCGATTAAGAATCACTGGAATTCAACATTGAAGCGTAAGTTCTCTTCGATTGCTGAGATTAAAACTGAGTGTATGAGTCATGGATCGACGATTTCGATTGGAAATCAGTGTTTGAGTCCATCGAGATCGGATACGAACGATTCGATTCCGAGTCAGAACAAAAGGCCTTCGACTCGTCTAAGCCTATCTCTTCCAGGAACAGAATCATCACCTCCGCGACCGCAGCAGCAGAGTATTTCATCATTGCCGGAGGATCGTGAGGCGAAAGCGAAATCGGCGCGTTGTGGTAAGGAATTTCTGTCTGTAATGCAATTGATGATTAGAGAAGAGGTGAGGAATTACATAGCGGAGTATAGAAAACGGCAACGAATGAATGAGGAAGAAGATAGAAAGGCAGGGTAA

Protein sequence

MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIKTECMSHGSTISIGNQCLSPSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRPQQQSISSLPEDREAKAKSARCGKEFLSVMQLMIREEVRNYIAEYRKRQRMNEEEDRKAG
BLAST of Cp4.1LG01g02340 vs. Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.1e-43
Identity = 116/276 (42.03%), Postives = 145/276 (52.54%), Query Frame = 1

Query: 9   DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQAFT 68
           DR+KGPWSPEED+ LR LV +YG RNW+VI +SI GRSGKSCRLRW NQL P VE + F+
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAE---------- 128
           AEEDE I  AHA+ GNKWATIARLLNGRTDNA+KNHWNSTLKRK                
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSEDHR 122

Query: 129 -IKTECMSHGSTISIGNQCL--SPSRSDTNDS--IP------------------------ 188
            +K    +    +  G      SP+ SD +DS  IP                        
Sbjct: 123 PVKRSVSAGSPPVVTGLYMSPGSPTGSDVSDSSTIPILPSVELFKPVPRPGAVVLPLPIE 182

Query: 189 --SQNKRPSTRLSLSLPGTE-----------------SSPPRPQQQSISSLPEDREAKAK 220
             S +  P T LSLSLPG +                 +S       ++S +P     +  
Sbjct: 183 TSSSSDDPPTSLSLSLPGADVSEESNRSHESTNINNTTSSRHNHNNTVSFMPFSGGFRGA 242

BLAST of Cp4.1LG01g02340 vs. Swiss-Prot
Match: MYB_BOVIN (Transcriptional activator Myb OS=Bos taurus GN=MYB PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.7e-32
Identity = 60/102 (58.82%), Postives = 80/102 (78.43%), Query Frame = 1

Query: 11  VKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQAFTAE 70
           +KGPW+ EEDQ +  LVQ+YG + WSVI + ++GR GK CR RW N L P+V++ ++T E
Sbjct: 91  IKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEE 150

Query: 71  EDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
           ED +I +AH + GN+WA IA+LL GRTDNAIKNHWNST++RK
Sbjct: 151 EDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 192

BLAST of Cp4.1LG01g02340 vs. Swiss-Prot
Match: MYB_CHICK (Transcriptional activator Myb OS=Gallus gallus GN=MYB PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.7e-32
Identity = 60/102 (58.82%), Postives = 80/102 (78.43%), Query Frame = 1

Query: 11  VKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQAFTAE 70
           +KGPW+ EEDQ +  LVQ+YG + WSVI + ++GR GK CR RW N L P+V++ ++T E
Sbjct: 91  IKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEE 150

Query: 71  EDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
           ED +I +AH + GN+WA IA+LL GRTDNAIKNHWNST++RK
Sbjct: 151 EDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 192

BLAST of Cp4.1LG01g02340 vs. Swiss-Prot
Match: MYB_HUMAN (Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 3.7e-32
Identity = 60/102 (58.82%), Postives = 80/102 (78.43%), Query Frame = 1

Query: 11  VKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQAFTAE 70
           +KGPW+ EEDQ +  LVQ+YG + WSVI + ++GR GK CR RW N L P+V++ ++T E
Sbjct: 91  IKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEE 150

Query: 71  EDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
           ED +I +AH + GN+WA IA+LL GRTDNAIKNHWNST++RK
Sbjct: 151 EDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 192

BLAST of Cp4.1LG01g02340 vs. Swiss-Prot
Match: MYBA_XENLA (Myb-related protein A OS=Xenopus laevis GN=mybl1 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.9e-32
Identity = 60/102 (58.82%), Postives = 78/102 (76.47%), Query Frame = 1

Query: 11  VKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQAFTAE 70
           VKGPW+ EEDQ +  LV +YG + WS+I + ++GR GK CR RW N L PDV++ ++T E
Sbjct: 85  VKGPWTKEEDQRVIELVHKYGPKKWSIIAKHLKGRIGKQCRERWHNHLNPDVKKSSWTEE 144

Query: 71  EDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
           ED +I  AH + GN+WA IA+LL GRTDN+IKNHWNST+KRK
Sbjct: 145 EDRIIYSAHKRMGNRWAEIAKLLPGRTDNSIKNHWNSTMKRK 186

BLAST of Cp4.1LG01g02340 vs. TrEMBL
Match: A0A0A0LA79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199590 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.4e-64
Identity = 144/225 (64.00%), Postives = 169/225 (75.11%), Query Frame = 1

Query: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCP 60
           M S   DIDRVKGPWSPEED LLR+LVQ  GARNWS+I QSI GRSGKSCRLRWFNQLCP
Sbjct: 1   MPSVHPDIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120
            ++R+ FT EED  IV+AH  +GNKWATIARLLNGRTDNAIKNHWNSTLKRK+ S  E K
Sbjct: 61  GLDRRPFTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKYGSNREKK 120

Query: 121 TE-C-MSHGSTISIGNQCLSPSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRPQQQSI 180
           T+ C +S GSTIS+ NQCLS  RS+++D      + PST L+L LPG++  P     +SI
Sbjct: 121 TDHCGISQGSTISVWNQCLS-QRSESSD-WDEIIEPPSTTLTLCLPGSDELP----HKSI 180

Query: 181 SSLP-EDREAKAKSARC---GKEFLSVMQLMIREEVRNYIAEYRK 220
           SSLP ED   + K  +    G+EF+ VMQ MI+EEVRNY+AEY K
Sbjct: 181 SSLPVEDMVEERKGGKLDWFGEEFMCVMQKMIKEEVRNYMAEYEK 219

BLAST of Cp4.1LG01g02340 vs. TrEMBL
Match: D9ZJ57_MALDO (MYB domain class transcription factor OS=Malus domestica GN=MYB3 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 5.4e-54
Identity = 132/261 (50.57%), Postives = 163/261 (62.45%), Query Frame = 1

Query: 7   DIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQA 66
           ++DRVKGPWSP+ED+ LR +VQRYGARNWSVI +S+ GRSGKSCRLRW NQL P+VE +A
Sbjct: 5   ELDRVKGPWSPDEDEKLRQIVQRYGARNWSVISKSVPGRSGKSCRLRWCNQLSPEVEHRA 64

Query: 67  FTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAE-------- 126
           FT EEDE+I  AHAK+GNKWATIARLLNGRTDNAIKNHWNSTLKRKFS+++         
Sbjct: 65  FTPEEDEIIAGAHAKYGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSALSPNEDGATID 124

Query: 127 ---IKTECMSHGSTISIGNQCLSP--------SRSD--------------------TNDS 186
              ++ E  +  + +S    C SP        S SD                    T +S
Sbjct: 125 EGILRPEKKTATAAVSFSGLCYSPGSPSGSDVSESDVPASSSSQVFRPVARTAAIVTRES 184

Query: 187 IPSQNK--RPSTRLSLSLPGTES---------SPPRPQQQSISSLPEDREAKAKSARC-- 215
            PSQ +   PST L+LSLPG ES         S P   Q++ S  PE +E    ++    
Sbjct: 185 PPSQTEWCEPSTLLTLSLPGAESALHELPTNESAPHRGQRTASLQPE-KETNVNNSNTMS 244

BLAST of Cp4.1LG01g02340 vs. TrEMBL
Match: A0A0J8BJG1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g223840 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.7e-52
Identity = 124/226 (54.87%), Postives = 151/226 (66.81%), Query Frame = 1

Query: 9   DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQAFT 68
           DR+KGPWSPEED+LL+ LVQ++GARNWSVI +SI GRSGKSCRLRW NQL P+VE + F+
Sbjct: 4   DRIKGPWSPEEDELLQKLVQKHGARNWSVISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 63

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIKTECMSHGS 128
            EEDE+IV AHA+HGNKWATI+RLLNGRTDNAIKNHWNSTLKRKFSSI            
Sbjct: 64  TEEDEIIVRAHAQHGNKWATISRLLNGRTDNAIKNHWNSTLKRKFSSIVAGDEIYRPEKR 123

Query: 129 TISIGNQCLSPSRSDTNDS----IPS-------QNKRPSTRLSLSLPGTESSPPRPQQQS 188
                +  LSPS SD +DS    +P+       Q   P T L+LSLPG     P    +S
Sbjct: 124 PEISFSPPLSPSESDVSDSGVGYLPTVVEERENQENDPLTALTLSLPGIIEEHP---SKS 183

Query: 189 ISSLPEDR-------EAKAKSARCGKEFLSVMQLMIREEVRNYIAE 217
            S+  E R       E+  ++   G E ++VMQ MI++EVRNY+ E
Sbjct: 184 ESTQEETRKVDVVGCESVKETMSFGPELMAVMQEMIKKEVRNYMME 226

BLAST of Cp4.1LG01g02340 vs. TrEMBL
Match: V4S6Y3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029124mg PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.0e-52
Identity = 124/229 (54.15%), Postives = 150/229 (65.50%), Query Frame = 1

Query: 9   DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQAFT 68
           +RVKGPWSPEEDQLL  LVQRYGARNWSVI +SI GRSGKSCRLRW NQL P+VE + FT
Sbjct: 8   ERVKGPWSPEEDQLLLKLVQRYGARNWSVISKSIPGRSGKSCRLRWCNQLSPEVEHRTFT 67

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSI------------ 128
            +EDE+I++AHA++GNKWATIARLLNGRTDNAIKNHWNSTLKRK++              
Sbjct: 68  PDEDEIIIKAHARYGNKWATIARLLNGRTDNAIKNHWNSTLKRKYAETTRSALAAGVDED 127

Query: 129 AEIKTECMSHGSTISIGNQCLSPSRSDTNDS------IPSQNK-----RPSTRLSLSLPG 188
           +E   E     S +S+     SPS SD +DS        S+++       ST L+L LP 
Sbjct: 128 SEDSDEREKKRSAVSVSGISCSPSGSDVSDSGLPVRVFESESRYNEVFDVSTDLTLGLPV 187

Query: 189 TESSPPRPQQQSISSLPEDREAKAKSARCGKEFLSVMQLMIREEVRNYI 215
           TE        Q  ++  +D+ +   S   G EFLSVMQ MIR EVRNY+
Sbjct: 188 TELKKCDSVSQQENNSDDDKTSNTPS--FGPEFLSVMQEMIRNEVRNYM 234

BLAST of Cp4.1LG01g02340 vs. TrEMBL
Match: A0A0K9R8X8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093790 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.0e-52
Identity = 125/230 (54.35%), Postives = 153/230 (66.52%), Query Frame = 1

Query: 9   DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQAFT 68
           DR+KGPWSPEED LL  LVQ++GARNWSVI +SI GRSGKSCRLRW NQL P+VE + FT
Sbjct: 5   DRIKGPWSPEEDDLLTKLVQKHGARNWSVISKSIPGRSGKSCRLRWCNQLSPEVEHRPFT 64

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEI-KTECMSHG 128
           AEED++IV AH K GNKWATI+RLLNGRTDNAIKNHWNSTLKRKFS++  + +       
Sbjct: 65  AEEDDIIVRAHHKFGNKWATISRLLNGRTDNAIKNHWNSTLKRKFSAVGGVDEVYRPEKR 124

Query: 129 STISIGNQCLSPSRSDTNDSIPSQNKRPS-------------TRLSLSLPGTESSPP--- 188
             IS  +   SPS SD +DS  +   RP+             T L+LSLPG E   P   
Sbjct: 125 PEISHFSPPASPSESDVSDSGVAAGFRPAVVEERENLEDDPLTALTLSLPGVEEQHPSRI 184

Query: 189 RPQQQSISSLPEDR--EAKAKSARCGKEFLSVMQLMIREEVRNYIAEYRK 220
            P Q+      E+R  E+  ++   G E ++VMQ MIR+EVR+Y+AE  K
Sbjct: 185 EPTQE------ENRKGESVKETLSFGPELMTVMQEMIRKEVRSYMAEAEK 228

BLAST of Cp4.1LG01g02340 vs. TAIR10
Match: AT4G37260.1 (AT4G37260.1 myb domain protein 73)

HSP 1 Score: 189.1 bits (479), Expect = 3.0e-48
Identity = 121/271 (44.65%), Postives = 158/271 (58.30%), Query Frame = 1

Query: 7   DIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQA 66
           +++R+KGPWSPEED LL+ LVQ++G RNWS+I +SI GRSGKSCRLRW NQL P+VE +A
Sbjct: 8   NMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRA 67

Query: 67  FTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFS------------ 126
           F+ EEDE I+ AHA+ GNKWATI+RLLNGRTDNAIKNHWNSTLKRK S            
Sbjct: 68  FSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQSCDFGGNG 127

Query: 127 ----SIAEIKT--ECMSHGSTISIGNQCL--SPSRSDTND-----------------SIP 186
               ++ E +      S G  +S G      SPS SD ++                 +  
Sbjct: 128 GYDGNLGEEQPLKRTASGGGGVSTGLYMSPGSPSGSDVSEQSSGGAHVFKPTVRSEVTAS 187

Query: 187 SQNKRPSTRLSLSLPGTESS-----PPRPQQQSISS-------LP---------EDREAK 220
           S  + P T LSLSLP T+ +     P +  Q ++          P         E+ EAK
Sbjct: 188 SSGEDPPTYLSLSLPWTDETVRVNEPVQLNQNTVMDGGYTAELFPVRKEEQVEVEEEEAK 247

BLAST of Cp4.1LG01g02340 vs. TAIR10
Match: AT2G23290.1 (AT2G23290.1 myb domain protein 70)

HSP 1 Score: 181.4 bits (459), Expect = 6.3e-46
Identity = 82/108 (75.93%), Postives = 95/108 (87.96%), Query Frame = 1

Query: 7   DIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQA 66
           ++DR+KGPWSPEED LL+ LVQ++G RNWS+I +SI GRSGKSCRLRW NQL P+VE + 
Sbjct: 8   EMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRG 67

Query: 67  FTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFS 115
           FTAEED+ I+ AHA+ GNKWATIARLLNGRTDNAIKNHWNSTLKRK S
Sbjct: 68  FTAEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCS 115

BLAST of Cp4.1LG01g02340 vs. TAIR10
Match: AT5G67300.1 (AT5G67300.1 myb domain protein r1)

HSP 1 Score: 177.2 bits (448), Expect = 1.2e-44
Identity = 116/276 (42.03%), Postives = 145/276 (52.54%), Query Frame = 1

Query: 9   DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQAFT 68
           DR+KGPWSPEED+ LR LV +YG RNW+VI +SI GRSGKSCRLRW NQL P VE + F+
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAE---------- 128
           AEEDE I  AHA+ GNKWATIARLLNGRTDNA+KNHWNSTLKRK                
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSEDHR 122

Query: 129 -IKTECMSHGSTISIGNQCL--SPSRSDTNDS--IP------------------------ 188
            +K    +    +  G      SP+ SD +DS  IP                        
Sbjct: 123 PVKRSVSAGSPPVVTGLYMSPGSPTGSDVSDSSTIPILPSVELFKPVPRPGAVVLPLPIE 182

Query: 189 --SQNKRPSTRLSLSLPGTE-----------------SSPPRPQQQSISSLPEDREAKAK 220
             S +  P T LSLSLPG +                 +S       ++S +P     +  
Sbjct: 183 TSSSSDDPPTSLSLSLPGADVSEESNRSHESTNINNTTSSRHNHNNTVSFMPFSGGFRGA 242

BLAST of Cp4.1LG01g02340 vs. TAIR10
Match: AT3G50060.1 (AT3G50060.1 myb domain protein 77)

HSP 1 Score: 172.2 bits (435), Expect = 3.8e-43
Identity = 80/113 (70.80%), Postives = 91/113 (80.53%), Query Frame = 1

Query: 9   DRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQAFT 68
           DRVKGPWS EED+ LR +V++YG RNWS I +SI GRSGKSCRLRW NQL P+VE + F+
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIKT 122
            EEDE IV A A+ GNKWATIARLLNGRTDNA+KNHWNSTLKRK S    + T
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSGGVAVTT 115

BLAST of Cp4.1LG01g02340 vs. TAIR10
Match: AT3G55730.1 (AT3G55730.1 myb domain protein 109)

HSP 1 Score: 160.6 bits (405), Expect = 1.2e-39
Identity = 84/168 (50.00%), Postives = 111/168 (66.07%), Query Frame = 1

Query: 10  RVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQAFTA 69
           +VKGPWS EED +L  LV++ G RNWS+I + I GRSGKSCRLRW NQL P ++R+ F+ 
Sbjct: 54  KVKGPWSTEEDAVLTKLVRKLGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFSD 113

Query: 70  EEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIKTECMSHGST 129
           EED +I+ AHA HGNKWA IA+LL GRTDNAIKNHWNSTL+RK++ +     + M++  T
Sbjct: 114 EEDRMIISAHAVHGNKWAVIAKLLTGRTDNAIKNHWNSTLRRKYADLWN-NGQWMANSVT 173

Query: 130 ISIGNQCLSPSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRPQQQS 178
                     + S  N+++      PS++  L      SSPP+P Q S
Sbjct: 174 ----------TASVKNENVDETTNPPSSKQQLPQGDINSSPPKPPQVS 210

BLAST of Cp4.1LG01g02340 vs. NCBI nr
Match: gi|449446099|ref|XP_004140809.1| (PREDICTED: transcription factor MYB44-like [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 6.3e-64
Identity = 144/225 (64.00%), Postives = 169/225 (75.11%), Query Frame = 1

Query: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCP 60
           M S   DIDRVKGPWSPEED LLR+LVQ  GARNWS+I QSI GRSGKSCRLRWFNQLCP
Sbjct: 1   MPSVHPDIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120
            ++R+ FT EED  IV+AH  +GNKWATIARLLNGRTDNAIKNHWNSTLKRK+ S  E K
Sbjct: 61  GLDRRPFTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKYGSNREKK 120

Query: 121 TE-C-MSHGSTISIGNQCLSPSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRPQQQSI 180
           T+ C +S GSTIS+ NQCLS  RS+++D      + PST L+L LPG++  P     +SI
Sbjct: 121 TDHCGISQGSTISVWNQCLS-QRSESSD-WDEIIEPPSTTLTLCLPGSDELP----HKSI 180

Query: 181 SSLP-EDREAKAKSARC---GKEFLSVMQLMIREEVRNYIAEYRK 220
           SSLP ED   + K  +    G+EF+ VMQ MI+EEVRNY+AEY K
Sbjct: 181 SSLPVEDMVEERKGGKLDWFGEEFMCVMQKMIKEEVRNYMAEYEK 219

BLAST of Cp4.1LG01g02340 vs. NCBI nr
Match: gi|302398931|gb|ADL36760.1| (MYB domain class transcription factor [Malus domestica])

HSP 1 Score: 219.2 bits (557), Expect = 7.7e-54
Identity = 132/261 (50.57%), Postives = 163/261 (62.45%), Query Frame = 1

Query: 7   DIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQA 66
           ++DRVKGPWSP+ED+ LR +VQRYGARNWSVI +S+ GRSGKSCRLRW NQL P+VE +A
Sbjct: 5   ELDRVKGPWSPDEDEKLRQIVQRYGARNWSVISKSVPGRSGKSCRLRWCNQLSPEVEHRA 64

Query: 67  FTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAE-------- 126
           FT EEDE+I  AHAK+GNKWATIARLLNGRTDNAIKNHWNSTLKRKFS+++         
Sbjct: 65  FTPEEDEIIAGAHAKYGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSALSPNEDGATID 124

Query: 127 ---IKTECMSHGSTISIGNQCLSP--------SRSD--------------------TNDS 186
              ++ E  +  + +S    C SP        S SD                    T +S
Sbjct: 125 EGILRPEKKTATAAVSFSGLCYSPGSPSGSDVSESDVPASSSSQVFRPVARTAAIVTRES 184

Query: 187 IPSQNK--RPSTRLSLSLPGTES---------SPPRPQQQSISSLPEDREAKAKSARC-- 215
            PSQ +   PST L+LSLPG ES         S P   Q++ S  PE +E    ++    
Sbjct: 185 PPSQTEWCEPSTLLTLSLPGAESALHELPTNESAPHRGQRTASLQPE-KETNVNNSNTMS 244

BLAST of Cp4.1LG01g02340 vs. NCBI nr
Match: gi|657962964|ref|XP_008373085.1| (PREDICTED: transcription factor MYB44-like [Malus domestica])

HSP 1 Score: 219.2 bits (557), Expect = 7.7e-54
Identity = 132/261 (50.57%), Postives = 163/261 (62.45%), Query Frame = 1

Query: 7   DIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVERQA 66
           ++DRVKGPWSP+ED+ LR +VQRYGARNWSVI +S+ GRSGKSCRLRW NQL P+VE +A
Sbjct: 18  ELDRVKGPWSPDEDEKLRQIVQRYGARNWSVISKSVPGRSGKSCRLRWCNQLSPEVEHRA 77

Query: 67  FTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAE-------- 126
           FT EEDE+I  AHAK+GNKWATIARLLNGRTDNAIKNHWNSTLKRKFS+++         
Sbjct: 78  FTPEEDEIIAGAHAKYGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSALSPNEDGATID 137

Query: 127 ---IKTECMSHGSTISIGNQCLSP--------SRSD--------------------TNDS 186
              ++ E  +  + +S    C SP        S SD                    T +S
Sbjct: 138 EGILRPEKKAATAAVSFSGLCYSPGSPSGSDVSESDVPASSSSQVFRPVARTAAIVTRES 197

Query: 187 IPSQNK--RPSTRLSLSLPGTES---------SPPRPQQQSISSLPEDREAKAKSARC-- 215
            PSQ +   PST L+LSLPG ES         S P   Q++ S  PE +E    ++    
Sbjct: 198 PPSQTEWCEPSTLLTLSLPGAESALHELPTNESAPHRGQRTASLQPE-KETNVNNSNTMS 257

BLAST of Cp4.1LG01g02340 vs. NCBI nr
Match: gi|470140452|ref|XP_004305954.1| (PREDICTED: transcription factor MYB44-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 218.4 bits (555), Expect = 1.3e-53
Identity = 129/256 (50.39%), Postives = 164/256 (64.06%), Query Frame = 1

Query: 4   EEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPDVE 63
           ++ ++DRVKGPWSPEED LLR LVQR+GARNW++I +SI GRSGKSCRLRW NQL P+VE
Sbjct: 7   QQRELDRVKGPWSPEEDDLLRKLVQRHGARNWTLISKSIPGRSGKSCRLRWCNQLSPEVE 66

Query: 64  RQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAE----- 123
            +AFTAEEDE+I  AH+K+GNKWATIARLLNGRTDNAIKNHWNSTLKRK+SS+AE     
Sbjct: 67  HRAFTAEEDEIIAAAHSKYGNKWATIARLLNGRTDNAIKNHWNSTLKRKYSSMAEDGGGG 126

Query: 124 ---------IKTECMSHGSTIS-IGNQCLSPSRSDTNDS--------------------- 183
                    ++ E  S  +++S  G    SPS SD +DS                     
Sbjct: 127 GVEENQYHILRPEKKSATASVSGRGYSPTSPSGSDVSDSGVAPAVTSAQVFWPMARAVMR 186

Query: 184 ----IPSQNKRPSTRLSLSLPGTESSPPRPQQQSIS-----SLPEDREAKAKSARCGKEF 215
                P     PST L+LSLPG      R ++++ S     SL E++    ++   G EF
Sbjct: 187 TESPPPRNEPEPSTLLTLSLPGGSEVATRREEKTTSLCLTTSLDENQN---RTMSFGPEF 246

BLAST of Cp4.1LG01g02340 vs. NCBI nr
Match: gi|731360186|ref|XP_010691674.1| (PREDICTED: transcription factor MYB44-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 214.5 bits (545), Expect = 1.9e-52
Identity = 126/233 (54.08%), Postives = 153/233 (65.67%), Query Frame = 1

Query: 2   TSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCPD 61
           TS     DR+KGPWSPEED+LL+ LVQ++GARNWSVI +SI GRSGKSCRLRW NQL P+
Sbjct: 8   TSPLMAADRIKGPWSPEEDELLQKLVQKHGARNWSVISKSIPGRSGKSCRLRWCNQLSPE 67

Query: 62  VERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIKT 121
           VE + F+ EEDE+IV AHA+HGNKWATI+RLLNGRTDNAIKNHWNSTLKRKFSSI     
Sbjct: 68  VEHRPFSTEEDEIIVRAHAQHGNKWATISRLLNGRTDNAIKNHWNSTLKRKFSSIVAGDE 127

Query: 122 ECMSHGSTISIGNQCLSPSRSDTNDS----IPS-------QNKRPSTRLSLSLPGTESSP 181
                       +  LSPS SD +DS    +P+       Q   P T L+LSLPG     
Sbjct: 128 IYRPEKRPEISFSPPLSPSESDVSDSGVGYLPTVVEERENQENDPLTALTLSLPGIIEEH 187

Query: 182 PRPQQQSISSLPEDR-------EAKAKSARCGKEFLSVMQLMIREEVRNYIAE 217
           P    +S S+  E R       E+  ++   G E ++VMQ MI++EVRNY+ E
Sbjct: 188 P---SKSESTQEETRKVDVVGCESVKETMSFGPELMAVMQEMIKKEVRNYMME 237

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
MYB44_ARATH2.1e-4342.03Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1[more]
MYB_BOVIN3.7e-3258.82Transcriptional activator Myb OS=Bos taurus GN=MYB PE=2 SV=1[more]
MYB_CHICK3.7e-3258.82Transcriptional activator Myb OS=Gallus gallus GN=MYB PE=1 SV=1[more]
MYB_HUMAN3.7e-3258.82Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2[more]
MYBA_XENLA4.9e-3258.82Myb-related protein A OS=Xenopus laevis GN=mybl1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LA79_CUCSA4.4e-6464.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199590 PE=4 SV=1[more]
D9ZJ57_MALDO5.4e-5450.57MYB domain class transcription factor OS=Malus domestica GN=MYB3 PE=2 SV=1[more]
A0A0J8BJG1_BETVU1.7e-5254.87Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g223840 PE=4 S... [more]
V4S6Y3_9ROSI3.0e-5254.15Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029124mg PE=4 SV=1[more]
A0A0K9R8X8_SPIOL5.0e-5254.35Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093790 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G37260.13.0e-4844.65 myb domain protein 73[more]
AT2G23290.16.3e-4675.93 myb domain protein 70[more]
AT5G67300.11.2e-4442.03 myb domain protein r1[more]
AT3G50060.13.8e-4370.80 myb domain protein 77[more]
AT3G55730.11.2e-3950.00 myb domain protein 109[more]
Match NameE-valueIdentityDescription
gi|449446099|ref|XP_004140809.1|6.3e-6464.00PREDICTED: transcription factor MYB44-like [Cucumis sativus][more]
gi|302398931|gb|ADL36760.1|7.7e-5450.57MYB domain class transcription factor [Malus domestica][more]
gi|657962964|ref|XP_008373085.1|7.7e-5450.57PREDICTED: transcription factor MYB44-like [Malus domestica][more]
gi|470140452|ref|XP_004305954.1|1.3e-5350.39PREDICTED: transcription factor MYB44-like [Fragaria vesca subsp. vesca][more]
gi|731360186|ref|XP_010691674.1|1.9e-5254.08PREDICTED: transcription factor MYB44-like [Beta vulgaris subsp. vulgaris][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom
IPR009057Homeobox-like_sf
IPR001005SANT/Myb
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0030154 cell differentiation
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0001135 transcription factor activity, RNA polymerase II transcription factor recruiting
molecular_function GO:0044212 transcription regulatory region DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g02340.1Cp4.1LG01g02340.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 12..57
score: 3.3E-17coord: 64..108
score: 1.1
IPR001005SANT/Myb domainSMARTSM00717santcoord: 11..60
score: 2.2E-11coord: 63..111
score: 4.5
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 13..65
score: 2.8E-24coord: 66..112
score: 3.7
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 9..105
score: 5.88
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 7..58
score: 19.947coord: 59..113
score: 24
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 7..230
score: 2.1
NoneNo IPR availablePANTHERPTHR10641:SF639SUBFAMILY NOT NAMEDcoord: 7..230
score: 2.1

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g02340Cucsa.244650Cucumber (Gy14) v1cgycpeB0654
Cp4.1LG01g02340CmaCh04G004710Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g02340CmaCh16G003430Cucurbita maxima (Rimu)cmacpeB351
Cp4.1LG01g02340CmoCh04G005040Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g02340CmoCh16G003650Cucurbita moschata (Rifu)cmocpeB311
Cp4.1LG01g02340Cla013099Watermelon (97103) v1cpewmB433
Cp4.1LG01g02340Csa3G199590Cucumber (Chinese Long) v2cpecuB389
Cp4.1LG01g02340ClCG05G010300Watermelon (Charleston Gray)cpewcgB394
Cp4.1LG01g02340CSPI03G18140Wild cucumber (PI 183967)cpecpiB388
Cp4.1LG01g02340Lsi05G002380Bottle gourd (USVL1VR-Ls)cpelsiB369
Cp4.1LG01g02340MELO3C007586.2Melon (DHL92) v3.6.1cpemedB507
Cp4.1LG01g02340MELO3C010833.2Melon (DHL92) v3.6.1cpemedB472
Cp4.1LG01g02340MELO3C031994.2Melon (DHL92) v3.6.1cpemedB481
Cp4.1LG01g02340MELO3C016789.2Melon (DHL92) v3.6.1cpemedB492
Cp4.1LG01g02340CsaV3_2G026410Cucumber (Chinese Long) v3cpecucB0481
Cp4.1LG01g02340CsaV3_3G018200Cucumber (Chinese Long) v3cpecucB0484
Cp4.1LG01g02340CsaV3_4G034750Cucumber (Chinese Long) v3cpecucB0511
Cp4.1LG01g02340CsaV3_6G043570Cucumber (Chinese Long) v3cpecucB0576
Cp4.1LG01g02340Bhi09G002692Wax gourdcpewgoB0580
Cp4.1LG01g02340Bhi01G001282Wax gourdcpewgoB0517
Cp4.1LG01g02340Bhi04G000361Wax gourdcpewgoB0539
Cp4.1LG01g02340Bhi03G000730Wax gourdcpewgoB0547
Cp4.1LG01g02340CsGy4G022770Cucumber (Gy14) v2cgybcpeB515
Cp4.1LG01g02340CsGy3G018030Cucumber (Gy14) v2cgybcpeB362
Cp4.1LG01g02340CsGy2G018680Cucumber (Gy14) v2cgybcpeB213
Cp4.1LG01g02340CsGy6G027900Cucumber (Gy14) v2cgybcpeB805
Cp4.1LG01g02340Carg08142Silver-seed gourdcarcpeB0527
Cp4.1LG01g02340Carg19667Silver-seed gourdcarcpeB0408
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g02340Cp4.1LG14g04400Cucurbita pepo (Zucchini)cpecpeB234