Cucsa.244650 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.244650
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionMYB transcription factor
Locationscaffold02135 : 516902 .. 517241 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTCTGTACACCCCGACATCGATCGGGTGAAAGGTCCGTGGAGTCCGGAAGAGGACCTCTTACTTCGAATGCTAGTCCAGGATCAAGGCGCTCGGAACTGGTCTCTTATCAGTCAATCCATTCACGGCCGCTCCGGAAAATCCTGCCGTTTACGCTGGTTTAATCAGCTATGTCCTGGGCTGGACCGTCGTCCTTTCACGCCAGAAGAGGACGCATTCATCGTGGATGCACATCGTATTTACGGAAACAAATGGGCGACCATCGCCAGGCTTTTGAATGGACGAACCGACAATGCGATTAAGAATCACTGGAATTCGACATTGAAACGGAAGTATG

mRNA sequence

ATGCCGTCTGTACACCCCGACATCGATCGGGTGAAAGGTCCGTGGAGTCCGGAAGAGGACCTCTTACTTCGAATGCTAGTCCAGGATCAAGGCGCTCGGAACTGGTCTCTTATCAGTCAATCCATTCACGGCCGCTCCGGAAAATCCTGCCGTTTACGCTGGTTTAATCAGCTATGTCCTGGGCTGGACCGTCGTCCTTTCACGCCAGAAGAGGACGCATTCATCGTGGATGCACATCGTATTTACGGAAACAAATGGGCGACCATCGCCAGGCTTTTGAATGGACGAACCGACAATGCGATTAAGAATCACTGGAATTCGACATTGAAACGGAAGTATG

Coding sequence (CDS)

ATGCCGTCTGTACACCCCGACATCGATCGGGTGAAAGGTCCGTGGAGTCCGGAAGAGGACCTCTTACTTCGAATGCTAGTCCAGGATCAAGGCGCTCGGAACTGGTCTCTTATCAGTCAATCCATTCACGGCCGCTCCGGAAAATCCTGCCGTTTACGCTGGTTTAATCAGCTATGTCCTGGGCTGGACCGTCGTCCTTTCACGCCAGAAGAGGACGCATTCATCGTGGATGCACATCGTATTTACGGAAACAAATGGGCGACCATCGCCAGGCTTTTGAATGGACGAACCGACAATGCGATTAAGAATCACTGGAATTCGACATTGAAACGGAAGTATG

Protein sequence

MPSVHPDIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRPFTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKYX
Homology
[Close]
BLAST of Cucsa.244650 vs. Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.5e-39
Identity = 76/104 (73.08%), Postives = 85/104 (81.73%), Query Frame = 1 

Query: 9   DRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRPFT 68
           DR+KGPWSPEED  LR LV   G RNW++IS+SI GRSGKSCRLRW NQL P ++ RPF+
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 69  PEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
            EED  I  AH  +GNKWATIARLLNGRTDNA+KNHWNSTLKRK
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]
BLAST of Cucsa.244650 vs. Swiss-Prot
Match: MYBB_XENLA (Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2)

HSP 1 Score: 131.7 bits (330), Expect = 5.0e-30
Identity = 59/109 (54.13%), Postives = 79/109 (72.48%), Query Frame = 1 

Query: 4   VHPDIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLD 63
           +HPD+  VKGPW+ EED  +  LV+  G ++W+LI++ + GR GK CR RW N L P + 
Sbjct: 77  LHPDL--VKGPWTKEEDEKVIELVKKYGTKHWTLIAKQLRGRMGKQCRERWHNHLNPEVK 136

Query: 64  RRPFTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
           +  +T EED  I  AH++ GN+WA IA+LL GRTDNA+KNHWNST+KRK
Sbjct: 137 KSSWTEEEDRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRK 183


HSP 2 Score: 79.0 bits (193), Expect = 3.8e-14
Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 1 

Query: 6   PDIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRR 65
           P  +RVK  W+PEED  L+ LV+  G   W  I+ +++ R+ + C+ RW   L P L + 
Sbjct: 25  PKENRVKVKWTPEEDETLKALVKKHGQGEWKTIASNLNNRTEQQCQHRWLRVLHPDLVKG 84

Query: 66  PFTPEEDAFIVDAHRIYGNK-WATIARLLNGRTDNAIKNHWNSTL 110
           P+T EED  +++  + YG K W  IA+ L GR     +  W++ L
Sbjct: 85  PWTKEEDEKVIELVKKYGTKHWTLIAKQLRGRMGKQCRERWHNHL 129

[Close]
BLAST of Cucsa.244650 vs. Swiss-Prot
Match: MYBB_CHICK (Myb-related protein B OS=Gallus gallus GN=MYBL2 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.2e-29
Identity = 57/104 (54.81%), Postives = 75/104 (72.12%), Query Frame = 1 

Query: 9   DRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRPFT 68
           D VKGPW+ EED  +  LV+  G + W+LI++ + GR GK CR RW N L P + +  +T
Sbjct: 80  DLVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKKSSWT 139

Query: 69  PEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
            EED  I +AH++ GN+WA IA+LL GRTDNA+KNHWNST+KRK
Sbjct: 140 EEEDRIIFEAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRK 183

[Close]
BLAST of Cucsa.244650 vs. Swiss-Prot
Match: MYBB_HUMAN (Myb-related protein B OS=Homo sapiens GN=MYBL2 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.2e-28
Identity = 56/104 (53.85%), Postives = 75/104 (72.12%), Query Frame = 1 

Query: 9   DRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRPFT 68
           D VKGPW+ EED  +  LV+  G + W+LI++ + GR GK CR RW N L P + +  +T
Sbjct: 80  DLVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKKSCWT 139

Query: 69  PEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
            EED  I +AH++ GN+WA IA++L GRTDNA+KNHWNST+KRK
Sbjct: 140 EEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNSTIKRK 183


HSP 2 Score: 70.1 bits (170), Expect = 1.8e-11
Identity = 34/101 (33.66%), Postives = 54/101 (53.47%), Query Frame = 1 

Query: 10  RVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRPFTP 69
           + K  W+ EED  LR LV+  G ++W  ++     R+ + C+ RW   L P L + P+T 
Sbjct: 29  KCKVKWTHEEDEQLRALVRQFGQQDWKFLASHFPNRTDQQCQYRWLRVLNPDLVKGPWTK 88

Query: 70  EEDAFIVDAHRIYGNK-WATIARLLNGRTDNAIKNHWNSTL 110
           EED  +++  + YG K W  IA+ L GR     +  W++ L
Sbjct: 89  EEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHL 129

[Close]
BLAST of Cucsa.244650 vs. Swiss-Prot
Match: MYBB_MOUSE (Myb-related protein B OS=Mus musculus GN=Mybl2 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.2e-28
Identity = 56/104 (53.85%), Postives = 75/104 (72.12%), Query Frame = 1 

Query: 9   DRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRPFT 68
           D VKGPW+ EED  +  LV+  G + W+LI++ + GR GK CR RW N L P + +  +T
Sbjct: 80  DLVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKKSCWT 139

Query: 69  PEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
            EED  I +AH++ GN+WA IA++L GRTDNA+KNHWNST+KRK
Sbjct: 140 EEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNSTIKRK 183


HSP 2 Score: 71.6 bits (174), Expect = 6.1e-12
Identity = 35/102 (34.31%), Postives = 55/102 (53.92%), Query Frame = 1 

Query: 9   DRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRPFT 68
           +R K  W+ EED  LR LV+  G ++W  ++     R+ + C+ RW   L P L + P+T
Sbjct: 28  NRCKVKWTHEEDEQLRALVRQFGQQDWKFLASHFPNRTDQQCQYRWLRVLNPDLVKGPWT 87

Query: 69  PEEDAFIVDAHRIYGNK-WATIARLLNGRTDNAIKNHWNSTL 110
            EED  +++  + YG K W  IA+ L GR     +  W++ L
Sbjct: 88  KEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHL 129

[Close]
BLAST of Cucsa.244650 vs. TrEMBL
Match: A0A0A0LA79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199590 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 7.7e-62
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1 

Query: 1   MPSVHPDIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCP 60
           MPSVHPDIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MPSVHPDIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  GLDRRPFTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKY 114
           GLDRRPFTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKY
Sbjct: 61  GLDRRPFTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKY 113

[Close]
BLAST of Cucsa.244650 vs. TrEMBL
Match: B9RY93_RICCO (R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_0811370 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 2.7e-43
Identity = 85/105 (80.95%), Postives = 91/105 (86.67%), Query Frame = 1 

Query: 9   DRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRPFT 68
           DRVKGPWSPEEDLLL+ LVQ  GARNW+LIS+SI GRSGKSCRLRW NQL P ++ RPF 
Sbjct: 8   DRVKGPWSPEEDLLLKKLVQRHGARNWTLISKSIPGRSGKSCRLRWCNQLSPEVEHRPFA 67

Query: 69  PEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKY 114
           PEED  IVDAH  +GNKWA IARLLNGRTDNAIKNHWNSTLKRKY
Sbjct: 68  PEEDEIIVDAHSRFGNKWAAIARLLNGRTDNAIKNHWNSTLKRKY 112

[Close]
BLAST of Cucsa.244650 vs. TrEMBL
Match: A0A059C7S0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02958 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 6.1e-43
Identity = 86/107 (80.37%), Postives = 92/107 (85.98%), Query Frame = 1 

Query: 7   DIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRP 66
           D DRVKGPWSP+ED LLR LVQ  GARNWSLIS+SI GRSGKSCRLRW NQL PG++ RP
Sbjct: 13  DADRVKGPWSPDEDDLLRKLVQRHGARNWSLISRSIPGRSGKSCRLRWCNQLSPGVEHRP 72

Query: 67  FTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKY 114
           FT EED  IV AH  YGN+WATIARLL+GRTDNAIKNHWNSTLKRKY
Sbjct: 73  FTAEEDDLIVRAHAKYGNRWATIARLLSGRTDNAIKNHWNSTLKRKY 119

[Close]
BLAST of Cucsa.244650 vs. TrEMBL
Match: A0A067LBP5_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_15461 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 8.0e-43
Identity = 85/106 (80.19%), Postives = 91/106 (85.85%), Query Frame = 1 

Query: 8   IDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRPF 67
           IDRVKGPWSPEED LL+  VQ  GARNWSLIS+SI GRSGKSCRLRW NQL P ++ RPF
Sbjct: 7   IDRVKGPWSPEEDQLLQKFVQRHGARNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRPF 66

Query: 68  TPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKY 114
           TPEED  I++AH   GNKWATIARLLNGRTDNAIKNHWNSTLKRKY
Sbjct: 67  TPEEDEIIINAHAKQGNKWATIARLLNGRTDNAIKNHWNSTLKRKY 112

[Close]
BLAST of Cucsa.244650 vs. TrEMBL
Match: A0A0D2V6S9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G149000 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.8e-42
Identity = 84/106 (79.25%), Postives = 90/106 (84.91%), Query Frame = 1 

Query: 7   DIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRP 66
           D+DRVKGPWSPEED LLR LV   GARNWSL+S+SI GRSGKSCRLRW NQL P ++ RP
Sbjct: 4   DVDRVKGPWSPEEDELLRKLVHRHGARNWSLVSRSIPGRSGKSCRLRWCNQLSPEVEHRP 63

Query: 67  FTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
           FT EED  IV AH  YGNKWATIARLLNGRTDNA+KNHWNSTLKRK
Sbjct: 64  FTSEEDGVIVKAHAKYGNKWATIARLLNGRTDNAVKNHWNSTLKRK 109

[Close]
BLAST of Cucsa.244650 vs. TAIR10
Match: AT2G23290.1 (AT2G23290.1 myb domain protein 70)

HSP 1 Score: 169.9 bits (429), Expect = 9.3e-43
Identity = 81/110 (73.64%), Postives = 90/110 (81.82%), Query Frame = 1 

Query: 3   SVHPDIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGL 62
           S   ++DR+KGPWSPEED LL+ LVQ  G RNWSLIS+SI GRSGKSCRLRW NQL P +
Sbjct: 4   STRKEMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEV 63

Query: 63  DRRPFTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
           + R FT EED  I+ AH  +GNKWATIARLLNGRTDNAIKNHWNSTLKRK
Sbjct: 64  EHRGFTAEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113

[Close]
BLAST of Cucsa.244650 vs. TAIR10
Match: AT4G37260.1 (AT4G37260.1 myb domain protein 73)

HSP 1 Score: 165.6 bits (418), Expect = 1.8e-41
Identity = 77/106 (72.64%), Postives = 89/106 (83.96%), Query Frame = 1 

Query: 7   DIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRP 66
           +++R+KGPWSPEED LL+ LVQ  G RNWSLIS+SI GRSGKSCRLRW NQL P ++ R 
Sbjct: 8   NMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRA 67

Query: 67  FTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
           F+ EED  I+ AH  +GNKWATI+RLLNGRTDNAIKNHWNSTLKRK
Sbjct: 68  FSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRK 113

[Close]
BLAST of Cucsa.244650 vs. TAIR10
Match: AT3G50060.1 (AT3G50060.1 myb domain protein 77)

HSP 1 Score: 163.7 bits (413), Expect = 6.7e-41
Identity = 77/104 (74.04%), Postives = 85/104 (81.73%), Query Frame = 1 

Query: 9   DRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRPFT 68
           DRVKGPWS EED  LR +V+  G RNWS IS+SI GRSGKSCRLRW NQL P ++ RPF+
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 69  PEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
           PEED  IV A   +GNKWATIARLLNGRTDNA+KNHWNSTLKRK
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]
BLAST of Cucsa.244650 vs. TAIR10
Match: AT5G67300.1 (AT5G67300.1 myb domain protein r1)

HSP 1 Score: 163.3 bits (412), Expect = 8.7e-41
Identity = 76/104 (73.08%), Postives = 85/104 (81.73%), Query Frame = 1 

Query: 9   DRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRPFT 68
           DR+KGPWSPEED  LR LV   G RNW++IS+SI GRSGKSCRLRW NQL P ++ RPF+
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 69  PEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
            EED  I  AH  +GNKWATIARLLNGRTDNA+KNHWNSTLKRK
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]
BLAST of Cucsa.244650 vs. TAIR10
Match: AT3G55730.1 (AT3G55730.1 myb domain protein 109)

HSP 1 Score: 157.9 bits (398), Expect = 3.7e-39
Identity = 72/104 (69.23%), Postives = 84/104 (80.77%), Query Frame = 1 

Query: 10  RVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRPFTP 69
           +VKGPWS EED +L  LV+  G RNWSLI++ I GRSGKSCRLRW NQL P L R+PF+ 
Sbjct: 54  KVKGPWSTEEDAVLTKLVRKLGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFSD 113

Query: 70  EEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKY 114
           EED  I+ AH ++GNKWA IA+LL GRTDNAIKNHWNSTL+RKY
Sbjct: 114 EEDRMIISAHAVHGNKWAVIAKLLTGRTDNAIKNHWNSTLRRKY 157

[Close]
BLAST of Cucsa.244650 vs. NCBI nr
Match: gi|449446099|ref|XP_004140809.1| (PREDICTED: transcription factor MYB44-like [Cucumis sativus])

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-61
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1 

Query: 1   MPSVHPDIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCP 60
           MPSVHPDIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MPSVHPDIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  GLDRRPFTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKY 114
           GLDRRPFTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKY
Sbjct: 61  GLDRRPFTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKY 113

[Close]
BLAST of Cucsa.244650 vs. NCBI nr
Match: gi|255555281|ref|XP_002518677.1| (PREDICTED: transcription factor MYB44 [Ricinus communis])

HSP 1 Score: 182.6 bits (462), Expect = 3.9e-43
Identity = 85/105 (80.95%), Postives = 91/105 (86.67%), Query Frame = 1 

Query: 9   DRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRPFT 68
           DRVKGPWSPEEDLLL+ LVQ  GARNW+LIS+SI GRSGKSCRLRW NQL P ++ RPF 
Sbjct: 8   DRVKGPWSPEEDLLLKKLVQRHGARNWTLISKSIPGRSGKSCRLRWCNQLSPEVEHRPFA 67

Query: 69  PEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKY 114
           PEED  IVDAH  +GNKWA IARLLNGRTDNAIKNHWNSTLKRKY
Sbjct: 68  PEEDEIIVDAHSRFGNKWAAIARLLNGRTDNAIKNHWNSTLKRKY 112

[Close]
BLAST of Cucsa.244650 vs. NCBI nr
Match: gi|702347303|ref|XP_010057256.1| (PREDICTED: transcription factor MYB44-like [Eucalyptus grandis])

HSP 1 Score: 181.4 bits (459), Expect = 8.8e-43
Identity = 86/107 (80.37%), Postives = 92/107 (85.98%), Query Frame = 1 

Query: 7   DIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRP 66
           D DRVKGPWSP+ED LLR LVQ  GARNWSLIS+SI GRSGKSCRLRW NQL PG++ RP
Sbjct: 13  DADRVKGPWSPDEDDLLRKLVQRHGARNWSLISRSIPGRSGKSCRLRWCNQLSPGVEHRP 72

Query: 67  FTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKY 114
           FT EED  IV AH  YGN+WATIARLL+GRTDNAIKNHWNSTLKRKY
Sbjct: 73  FTAEEDDLIVRAHAKYGNRWATIARLLSGRTDNAIKNHWNSTLKRKY 119

[Close]
BLAST of Cucsa.244650 vs. NCBI nr
Match: gi|802540323|ref|XP_012075857.1| (PREDICTED: transcription factor MYB44-like [Jatropha curcas])

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-42
Identity = 85/106 (80.19%), Postives = 91/106 (85.85%), Query Frame = 1 

Query: 8   IDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRPF 67
           IDRVKGPWSPEED LL+  VQ  GARNWSLIS+SI GRSGKSCRLRW NQL P ++ RPF
Sbjct: 7   IDRVKGPWSPEEDQLLQKFVQRHGARNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRPF 66

Query: 68  TPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKY 114
           TPEED  I++AH   GNKWATIARLLNGRTDNAIKNHWNSTLKRKY
Sbjct: 67  TPEEDEIIINAHAKQGNKWATIARLLNGRTDNAIKNHWNSTLKRKY 112

[Close]
BLAST of Cucsa.244650 vs. NCBI nr
Match: gi|672111213|ref|XP_008799576.1| (PREDICTED: transcription factor MYB44-like [Phoenix dactylifera])

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-42
Identity = 84/107 (78.50%), Postives = 92/107 (85.98%), Query Frame = 1 

Query: 7   DIDRVKGPWSPEEDLLLRMLVQDQGARNWSLISQSIHGRSGKSCRLRWFNQLCPGLDRRP 66
           D+DR+KGPWSPEED  L  LVQ  GARNWSLIS+SI GRSGKSCRLRW NQL P ++ RP
Sbjct: 11  DMDRIKGPWSPEEDEALHKLVQKHGARNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRP 70

Query: 67  FTPEEDAFIVDAHRIYGNKWATIARLLNGRTDNAIKNHWNSTLKRKY 114
           FTPEED  I+ AHR +GNKWATIARLL+GRTDNAIKNHWNSTLKRKY
Sbjct: 71  FTPEEDDTIIRAHRRFGNKWATIARLLSGRTDNAIKNHWNSTLKRKY 117

The following BLAST results are available for this feature:
BLAST of Cucsa.244650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB44_ARATH1.5e-3973.08Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1[more]
MYBB_XENLA5.0e-3054.13Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2[more]
MYBB_CHICK4.2e-2954.81Myb-related protein B OS=Gallus gallus GN=MYBL2 PE=1 SV=1[more]
MYBB_HUMAN1.2e-2853.85Myb-related protein B OS=Homo sapiens GN=MYBL2 PE=1 SV=1[more]
MYBB_MOUSE1.2e-2853.85Myb-related protein B OS=Mus musculus GN=Mybl2 PE=1 SV=1[more]
BLAST of Cucsa.244650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA79_CUCSA7.7e-62100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199590 PE=4 SV=1[more]
B9RY93_RICCO2.7e-4380.95R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_0811370 PE=4... [more]
A0A059C7S0_EUCGR6.1e-4380.37Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02958 PE=4 SV=1[more]
A0A067LBP5_JATCU8.0e-4380.19MYB family protein OS=Jatropha curcas GN=JCGZ_15461 PE=4 SV=1[more]
A0A0D2V6S9_GOSRA1.8e-4279.25Uncharacterized protein OS=Gossypium raimondii GN=B456_012G149000 PE=4 SV=1[more]
BLAST of Cucsa.244650 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G23290.19.3e-4373.64 myb domain protein 70[more]
AT4G37260.11.8e-4172.64 myb domain protein 73[more]
AT3G50060.16.7e-4174.04 myb domain protein 77[more]
AT5G67300.18.7e-4173.08 myb domain protein r1[more]
AT3G55730.13.7e-3969.23 myb domain protein 109[more]
BLAST of Cucsa.244650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449446099|ref|XP_004140809.1|1.1e-61100.00PREDICTED: transcription factor MYB44-like [Cucumis sativus][more]
gi|255555281|ref|XP_002518677.1|3.9e-4380.95PREDICTED: transcription factor MYB44 [Ricinus communis][more]
gi|702347303|ref|XP_010057256.1|8.8e-4380.37PREDICTED: transcription factor MYB44-like [Eucalyptus grandis][more]
gi|802540323|ref|XP_012075857.1|1.1e-4280.19PREDICTED: transcription factor MYB44-like [Jatropha curcas][more]
gi|672111213|ref|XP_008799576.1|1.5e-4278.50PREDICTED: transcription factor MYB44-like [Phoenix dactylifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.244650.1Cucsa.244650.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 64..108
score: 1.1E-15coord: 12..57
score: 8.6
IPR001005SANT/Myb domainSMARTSM00717santcoord: 11..60
score: 3.9E-11coord: 63..111
score: 8.0
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 66..112
score: 3.0E-23coord: 13..65
score: 3.9
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 9..105
score: 2.45
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 7..58
score: 16.726coord: 59..113
score: 24
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 7..113
score: 1.0
NoneNo IPR availablePANTHERPTHR10641:SF639SUBFAMILY NOT NAMEDcoord: 7..113
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.244650Cla013099Watermelon (97103) v1cgywmB462
Cucsa.244650Csa3G199590Cucumber (Chinese Long) v2cgycuB350
Cucsa.244650ClCG05G010300Watermelon (Charleston Gray)cgywcgB433
Cucsa.244650CSPI03G18140Wild cucumber (PI 183967)cgycpiB366
Cucsa.244650CmaCh16G003430Cucurbita maxima (Rimu)cgycmaB0685
Cucsa.244650CmaCh04G004710Cucurbita maxima (Rimu)cgycmaB0687
Cucsa.244650CmoCh16G003650Cucurbita moschata (Rifu)cgycmoB0685
Cucsa.244650CmoCh04G005040Cucurbita moschata (Rifu)cgycmoB0687
Cucsa.244650Lsi05G002380Bottle gourd (USVL1VR-Ls)cgylsiB404
Cucsa.244650Cp4.1LG14g04400Cucurbita pepo (Zucchini)cgycpeB0652
Cucsa.244650Cp4.1LG01g02340Cucurbita pepo (Zucchini)cgycpeB0654
Cucsa.244650MELO3C031994.2Melon (DHL92) v3.6.1cgymedB412
Cucsa.244650CsaV3_3G018200Cucumber (Chinese Long) v3cgycucB369
Cucsa.244650Cla97C05G092670Watermelon (97103) v2cgywmbB435
Cucsa.244650Bhi01G001282Wax gourdcgywgoB493
Cucsa.244650Carg19667Silver-seed gourdcarcgyB0345
Cucsa.244650Carg08142Silver-seed gourdcarcgyB0436
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.244650Watermelon (97103) v2cgywmbB434
Cucsa.244650Wax gourdcgywgoB494
Cucsa.244650Cucumber (Gy14) v1cgycgyB117
Cucsa.244650Cucurbita maxima (Rimu)cgycmaB0684
Cucsa.244650Cucurbita moschata (Rifu)cgycmoB0684
Cucsa.244650Wild cucumber (PI 183967)cgycpiB367
Cucsa.244650Cucumber (Chinese Long) v2cgycuB351
Cucsa.244650Melon (DHL92) v3.5.1cgymeB416
Cucsa.244650Melon (DHL92) v3.5.1cgymeB417
Cucsa.244650Watermelon (Charleston Gray)cgywcgB432
Cucsa.244650Watermelon (97103) v1cgywmB463
Cucsa.244650Bottle gourd (USVL1VR-Ls)cgylsiB403
Cucsa.244650Melon (DHL92) v3.6.1cgymedB411
Cucsa.244650Cucumber (Chinese Long) v3cgycucB370