Cp4.1LG00g02640 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG00g02640
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ras-like protein
Location	Cp4.1LG00 : 8375600 .. 8378965 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATCTGTCCCTTGAAATGGAATCAGCTGGAAAGAAGAGAAGGAGAAGGATAAAACGGAGAGGACATCACAGAAGTCGCGTAGGTGTCGTTTGGTTGTTCTTCCAATTTTTGAATTTCAGCTTCCTTTTCTCTAAGTCTCGCCACGAATCTCCTCCTTGAATTTATTCTCCTTCTTTTCCCTTTGCTAATCGGATGAAAAGGTACTCTAAATTCCGAATCTAAAATTCTGATATCCGCTCCCCTTTTTGCTCATCATCACCCCCTTTTGATTCTTTTCTTTCCATTTCATTTCTCAACTTCGATTCATTACGTTATTGATTCATTCACCATATCTCCCATTACCCAGGGTGCGAAACTAGCTCACAGGGTCAAATTTTGCGCTATTTGAATCCGAGGTTTATTAGTCTCATTCGCTGATTCATTCATTCATTGATTTTGTATCCATGTCGCTCCGTAGACGGACTTTGCTTAAGGTTATCGTTCTCGGTGATAGCGGGTATGTGCAATCATCACCTATGGTTCCTCTGCTGCTTGCTTGTTTCATTTTGGATTTTGATTTGAATGGTGTTTGATTTTGATTTCAGGGTTGGTAAGACGTCGTTGATGAATCAGTATCCTTCGAAAATTTTGTTGATAATGGTATTGATCTAAGTTTTGAGCATTTATTTTCGATCCTGGAATTTATGTTTCACTTCCTCTTATTTTGCCATTCATTTCCTAATTGGGTACGCCCCTTGCTTCAGTTCATGTGGAATATTGAGATTAATCATCTTCTGTTGGTGAGAGATCTTTGAATAATTTGTGTTTTCTTTGGTTTTAATTTTGTTTGACCATTTGTTTCTATATTCTCCTCGGAATTAGTTCTAACACATAGCTTATTGAGATTTTGATCCGTTGGAAATTGATGTTGAATTAGCATTACCGTTGAATTGGAATATGGGGCCTTAACTAGCCATTTAGATATGTGCATAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCTGATTTTGTCACCAAGGAACTTCAAATTGATGACAGGCTTGTCACACTACAAGTACGTTCTACTTCATAAAATCATTTCCTTTCAATAGCGTGGAGGCTGTGTTCACTTTGGCATGATTTTGTTCTCATGTTTATACTATATCTATAACATTTGCATTGCTAGATATGGGACACGGCCGGACAAGAGAGGTTTCAAAGTCTTGGAGTTGCATTCTATAGAGGGGCAGATTGCTGTGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTCGACACACTTGACAATTGGCATGATGAGTTTCTCAGACAGGTGAATCAATTCTGTTCCTTAAATTTTCTCGATTTTTCTGATGGATGTATTCGCTGTTGAGCTTGGTTATTACTGCTCTGTTACTAGGAAGTTTTATTATGGTTTGGGGTTGTTGTTTTAGTTCGATTTTTAAGATTTATATACTTCGTATGGTTTGGGGTTGTTGTTTTAGGTCTTAATTTAAATAGCTAATGTACAACCTTTGCTCCTTTAAGCTTTTTCCAAACACCTTTAGAGGTCTTTGTGTATTATAAACCGTGCTACTACCTTAAGTCGAGGAACAACCACCTCGGAAGCCATTTGTGCCTGGCTTGTAAATATTGTTTTGGCCTTTGAATGAGTGGCATTCTTCATTCTGGCGTGTACCCGTTTCTTTACCTTTGCAAGGCTATACCCTGCCTCTTCATTTTCCTCTTCTCATTGTCAAAGTATGGTTTTAATTGGATTACACTGCCATGCATGGTGTCGCTGAGATAATCATTGATGCTTCTTAGATTAAAGGACAATGATGTCTGAAAGCAGATTTTTACTCGCAAAAAACACTGAAGGCATATATGATCCATTAGAGAATTAAAAGAAAGATACTAGTAAATACATGCGCTCGTAGCTCTCCATGTATGCTTAGGCTGTTCGAGTTTGAGTGTGTTTATTTGTACTGATCTTTTTCTTTATTTCGAGTCTCGATTGCTTGCAGATTTTGGATGATGTCTAAATTAGTATTTTGTCTTTCAGGCAAACCCATCTGACCCCAGGACGTTCCCATTCATATTACTCGGAAATAAGATCGACATTGATGGTGGGAATAGTCGAGTGGTAAGCTATAAGGATGTCTGAACCTGTCACTTCTGAGATGTGTATTTTGTTTTTATGTTGATCTGATTATTATTACTGTAGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGATAATATTCCTTACTTCGAGACATCGGCTAAAGAAGACTACAACGTTGATGCTGCTTTCTTATGCATTGCCAAGACTGCATTAGCCAACGAACACGAACAGGATATGTAAGTTTCTAAAACGTGAATTTTGTCGAAAGGATTTATTGGAATGTTATTAGGATTTTAAGAGTTTCTAAAACGTAGCATTTACCTTGTGACGTTATCGGAAAGAATCGAGCTAATACAACTGAATTTGGCATGGTAGTTATTAAATATTCTATTCCATCGATTATTTCCATTTTATCGGTTATGTGTAAATTACCTCGGAATTTCAACATTTTTTTTGTGATTAGAGTTGCCATGAAATCTGTGTTTGTGTTTTATTTTTGGTGGTGTCCTCATTTGCCATACTTTTATGATGTTGCATATTCTATTTTTCATTACAAGACTTTGGACGAGACCGAAAAACACCAACGCCTTACTGATCATGAATGTAATGCAGATATTTTCAAGGAATCCCCGAAACCGTTGTGGAGACCGAGCAAAGGAGTGGCTGTGCATGCTGAATTTAGGAACTGAGAGACTCGGGAGCTCTCGTTCCTGGTCTTTTGGTTCGAATTCTTACACAATTTTTCTGGCATTGTGATTCATAGCTAATCTTTTGATTGCAGACCACCACCCTCTGTTCCATAACCTAACCACAGAGACTTGAATTTCATGTTATTTTTTTGTTGAAGAAATTAGCTTTCTTTTTGGTTAGGTAAGAACTTTGGGGAACCCTGAGTTTGTAGGATCCATTATTTCAAGGATCCTCACCAATCCAGTGTTCCTGAGTTGATAGTTCCTTTTTTTTTTTTTTTTTTCCCTTCTCGGGGTTGAGAAGAACACAATGGTGATTATCTCACATGTTCAGCTCGTTTCTTTGATGTATTTTATTCTTAATTCTCTTGTGGCTTCCTCTCCCATTTGAACTATTGTGGCTAAATGTTGTAGGAGACATGAGATGGGAAGGTATAGCCGCACCATGAGGTAAAGCCAAACAAGTCCAACAATCCCCTTAAGACTTGTCATCATACCAAGATTATCGTATAATTAATCTGATCCCAACGCTATTAATACCTAAATTATCAAC

mRNA sequence

AAAATCTGTCCCTTGAAATGGAATCAGCTGGAAAGAAGAGAAGGAGAAGGATAAAACGGAGAGGACATCACAGAAGTCGCGTAGGTGTCGTTTGGTTGTTCTTCCAATTTTTGAATTTCAGCTTCCTTTTCTCTAAGTCTCGCCACGAATCTCCTCCTTGAATTTATTCTCCTTCTTTTCCCTTTGCTAATCGGATGAAAAGGGTGCGAAACTAGCTCACAGGGTCAAATTTTGCGCTATTTGAATCCGAGGTTTATTAGTCTCATTCGCTGATTCATTCATTCATTGATTTTGTATCCATGTCGCTCCGTAGACGGACTTTGCTTAAGGTTATCGTTCTCGGTGATAGCGGGGTTGGTAAGACGTCGTTGATGAATCAGTATCCTTCGAAAATTTTGTTGATAATGCCATTTAGATATGTGCATAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCTGATTTTGTCACCAAGGAACTTCAAATTGATGACAGGCTTGTCACACTACAAATATGGGACACGGCCGGACAAGAGAGGTTTCAAAGTCTTGGAGTTGCATTCTATAGAGGGGCAGATTGCTGTGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTCGACACACTTGACAATTGGCATGATGAGTTTCTCAGACAGGCAAACCCATCTGACCCCAGGACGTTCCCATTCATATTACTCGGAAATAAGATCGACATTGATGGTGGGAATAGTCGAGTGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGATAATATTCCTTACTTCGAGACATCGGCTAAAGAAGACTACAACGTTGATGCTGCTTTCTTATGCATTGCCAAGACTGCATTAGCCAACGAACACGAACAGGATATATATTTTCAAGGAATCCCCGAAACCGTTGTGGAGACCGAGCAAAGGAGTGGCTGTGCATGCTGAATTTAGGAACTGAGAGACTCGGGAGCTCTCGTTCCTGGTCTTTTGGTTCGAATTCTTACACAATTTTTCTGGCATTGTGATTCATAGCTAATCTTTTGATTGCAGACCACCACCCTCTGTTCCATAACCTAACCACAGAGACTTGAATTTCATGTTATTTTTTTGTTGAAGAAATTAGCTTTCTTTTTGGTTAGGTAAGAACTTTGGGGAACCCTGAGTTTGTAGGATCCATTATTTCAAGGATCCTCACCAATCCAGTGTTCCTGAGTTGATAGTTCCTTTTTTTTTTTTTTTTTTCCCTTCTCGGGGTTGAGAAGAACACAATGGTGATTATCTCACATGTTCAGCTCGTTTCTTTGATGTATTTTATTCTTAATTCTCTTGTGGCTTCCTCTCCCATTTGAACTATTGTGGCTAAATGTTGTAGGAGACATGAGATGGGAAGGTATAGCCGCACCATGAGGTAAAGCCAAACAAGTCCAACAATCCCCTTAAGACTTGTCATCATACCAAGATTATCGTATAATTAATCTGATCCCAACGCTATTAATACCTAAATTATCAAC

Coding sequence (CDS)

ATGTCGCTCCGTAGACGGACTTTGCTTAAGGTTATCGTTCTCGGTGATAGCGGGGTTGGTAAGACGTCGTTGATGAATCAGTATCCTTCGAAAATTTTGTTGATAATGCCATTTAGATATGTGCATAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCTGATTTTGTCACCAAGGAACTTCAAATTGATGACAGGCTTGTCACACTACAAATATGGGACACGGCCGGACAAGAGAGGTTTCAAAGTCTTGGAGTTGCATTCTATAGAGGGGCAGATTGCTGTGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTCGACACACTTGACAATTGGCATGATGAGTTTCTCAGACAGGCAAACCCATCTGACCCCAGGACGTTCCCATTCATATTACTCGGAAATAAGATCGACATTGATGGTGGGAATAGTCGAGTGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGATAATATTCCTTACTTCGAGACATCGGCTAAAGAAGACTACAACGTTGATGCTGCTTTCTTATGCATTGCCAAGACTGCATTAGCCAACGAACACGAACAGGATATATATTTTCAAGGAATCCCCGAAACCGTTGTGGAGACCGAGCAAAGGAGTGGCTGTGCATGCTGA

Protein sequence

MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLRQANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVETEQRSGCAC

Homology

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BLAST of Cp4.1LG00g02640 vs. Swiss-Prot
Match: RAB7_SOYBN (Ras-related protein Rab7 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 1.9e-107
Identity = 192/218 (88.07%), Postives = 198/218 (90.83%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           MSLRRRTLLKVIVLGDSGVGKTSLMNQY            VHKKFSQQYKATIGADFVTK
Sbjct: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQY------------VHKKFSQQYKATIGADFVTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTL+NWH+EFL+
Sbjct: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLK 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           QANP DPR FPFILLGNKIDIDGGNSRVVSEKKA++WCA+K NIPYFETSAKEDYNVDAA
Sbjct: 121 QANPPDPRAFPFILLGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAA 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVV-ETEQRSGCAC 218
           FLCIAK ALANEHEQDIYFQGIPE  V E EQRSGCAC
Sbjct: 181 FLCIAKAALANEHEQDIYFQGIPEAAVPENEQRSGCAC 206

[Close]

BLAST of Cp4.1LG00g02640 vs. Swiss-Prot
Match: RAB7_VIGAC (Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 4.3e-107
Identity = 191/218 (87.61%), Postives = 198/218 (90.83%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           MSLRRRTLLKVIVLGD+GVGKTSLMNQY            VHKKFSQQYKATIGADFVTK
Sbjct: 1   MSLRRRTLLKVIVLGDTGVGKTSLMNQY------------VHKKFSQQYKATIGADFVTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVL YDVNVMKSFDTLDNWH+EFL+
Sbjct: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLK 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           QANP DPR+FPFILLGNKIDIDGGNSRVVSEKKA++WCASK NIPYFETSAKED+NVDAA
Sbjct: 121 QANPPDPRSFPFILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDFNVDAA 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVV-ETEQRSGCAC 218
           FLCIAK ALANEHEQDIYFQGIPE  V E EQRSGCAC
Sbjct: 181 FLCIAKAALANEHEQDIYFQGIPEAAVPENEQRSGCAC 206

[Close]

BLAST of Cp4.1LG00g02640 vs. Swiss-Prot
Match: RAG3A_ARATH (Ras-related protein RABG3a OS=Arabidopsis thaliana GN=RABG3A PE=2 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 7.6e-96
Identity = 169/218 (77.52%), Postives = 188/218 (86.24%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           M+ RRRTLLKVIVLGDSGVGKTSLMNQY            VHKKFS QYKATIGADFVTK
Sbjct: 1   MATRRRTLLKVIVLGDSGVGKTSLMNQY------------VHKKFSMQYKATIGADFVTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           ELQI ++LVTLQIWDTAGQERFQSLG AFYRGADCC LVYDVNV++SFD L+ WH+EFL+
Sbjct: 61  ELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLK 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           QA+PSDP+TFPFI+LGNKID+DGG+SRVVS+KKA +WCAS  NIPYFETSAK+D+NVD A
Sbjct: 121 QASPSDPKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEA 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQR-SGCAC 218
           FL IAKTALANEHEQDIYFQGIP+ V E E +  GCAC
Sbjct: 181 FLTIAKTALANEHEQDIYFQGIPDAVTENEPKGGGCAC 206

[Close]

BLAST of Cp4.1LG00g02640 vs. Swiss-Prot
Match: RAG3B_ARATH (Ras-related protein RABG3b OS=Arabidopsis thaliana GN=RABG3B PE=1 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.4e-94
Identity = 172/217 (79.26%), Postives = 184/217 (84.79%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           MS RRRTLLKVI+LGDSGVGKTSLMNQY            V+ KFSQQYKATIGADFVTK
Sbjct: 1   MSTRRRTLLKVIILGDSGVGKTSLMNQY------------VNNKFSQQYKATIGADFVTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSF++LDNWH+EFL 
Sbjct: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLT 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           +A+P DP  FPFILLGNK+DIDGGNSRVVSEKKAREWCA K NI YFETSAKEDYNVD +
Sbjct: 121 RASPRDPMAFPFILLGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDS 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQRSGCAC 218
           FLCI K ALANE +QDIYFQ  P+T    EQR GCAC
Sbjct: 181 FLCITKLALANERDQDIYFQ--PDTGSVPEQRGGCAC 203

[Close]

BLAST of Cp4.1LG00g02640 vs. Swiss-Prot
Match: RAB7_GOSHI (Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 9.4e-86
Identity = 156/222 (70.27%), Postives = 180/222 (81.08%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           M+ RRR LLKVI+LGDSGVGKTSLMNQY            V++KFS QYKATIGADF+TK
Sbjct: 1   MASRRRMLLKVIILGDSGVGKTSLMNQY------------VNRKFSNQYKATIGADFLTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           E+Q DDRL TLQIWDTAGQERFQSLGVAFYRGADCCVLV+DVNVMKSFD L+NW +EFL 
Sbjct: 61  EVQFDDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLI 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           QA+PSDP  FPF++LGNK+D+DGGNSRVVSEKKA+ WCASK NIPYFETSAKE +NVDAA
Sbjct: 121 QASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAA 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETV-----VETEQRSGCAC 218
           F CIA+ AL NE E++IY   +PET+        ++ +GC C
Sbjct: 181 FECIARNALKNEPEEEIY---LPETIDVASGGRPQRSTGCEC 207

[Close]

BLAST of Cp4.1LG00g02640 vs. TrEMBL
Match: A0A0A0K5B9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G206950 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 2.6e-111
Identity = 201/217 (92.63%), Postives = 202/217 (93.09%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           MS RRRTLLKVIVLGDSGVGKTSLMNQY            VHKKFSQQYKATIGADFVTK
Sbjct: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQY------------VHKKFSQQYKATIGADFVTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR
Sbjct: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           QANP DPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASK+NIPYFETSAKEDYNVDAA
Sbjct: 121 QANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYFETSAKEDYNVDAA 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQRSGCAC 218
           FLCIAKTALANEHEQDIYFQGIPETVVETEQR GCAC
Sbjct: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQRGGCAC 205

[Close]

BLAST of Cp4.1LG00g02640 vs. TrEMBL
Match: A0A0D2QNE8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G259500 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 3.9e-107
Identity = 193/217 (88.94%), Postives = 199/217 (91.71%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           MS+RRRTLLKVIVLGDSGVGKTSLMNQY            VHKKFSQQYKATIGADFVTK
Sbjct: 1   MSMRRRTLLKVIVLGDSGVGKTSLMNQY------------VHKKFSQQYKATIGADFVTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFL+
Sbjct: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLK 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           QANP+DPRTFPFILLGNKIDIDGGNSRVVSEKKA++WCASK N+PYFETSAKED NVDAA
Sbjct: 121 QANPADPRTFPFILLGNKIDIDGGNSRVVSEKKAKDWCASKGNMPYFETSAKEDINVDAA 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQRSGCAC 218
           FLCIAKTALANE EQDIYFQGIPE V ETEQR GCAC
Sbjct: 181 FLCIAKTALANEREQDIYFQGIPEAVTETEQRGGCAC 205

[Close]

BLAST of Cp4.1LG00g02640 vs. TrEMBL
Match: M5W8B5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011579mg PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.5e-106
Identity = 191/217 (88.02%), Postives = 199/217 (91.71%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           MSLRRRTLLKVIVLGDSGVGKTSLMNQY            VHKKFSQQYKATIGADFVTK
Sbjct: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQY------------VHKKFSQQYKATIGADFVTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTL+NWH+EFL+
Sbjct: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLK 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           QANP DP+TFPFILLGNKIDIDGGNSRVVSEKKA++WC SK NIPYFETSAKEDYNVDAA
Sbjct: 121 QANPPDPKTFPFILLGNKIDIDGGNSRVVSEKKAKDWCTSKGNIPYFETSAKEDYNVDAA 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQRSGCAC 218
           FLCIAKTALANEHEQDIYFQGIPE V E++QR GCAC
Sbjct: 181 FLCIAKTALANEHEQDIYFQGIPEAVSESDQRGGCAC 205

[Close]

BLAST of Cp4.1LG00g02640 vs. TrEMBL
Match: A0A068TXU8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00034663001 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.5e-106
Identity = 192/217 (88.48%), Postives = 197/217 (90.78%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           MSLRRRTLLKVIVLGDSGVGKTSLMNQY            VHKKFSQQYKATIGADFVTK
Sbjct: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQY------------VHKKFSQQYKATIGADFVTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM+SFDTLDNWH+EFLR
Sbjct: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLR 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           QANP DP+TFPFILLGNKIDIDGGNSRVVSEKKA+EWCASK NIPYFETSAKEDYNVDA+
Sbjct: 121 QANPPDPKTFPFILLGNKIDIDGGNSRVVSEKKAKEWCASKGNIPYFETSAKEDYNVDAS 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQRSGCAC 218
           F CIAKTALANEHEQDIYFQ IPE V E EQR GCAC
Sbjct: 181 FFCIAKTALANEHEQDIYFQNIPEAVSEAEQRGGCAC 205

[Close]

BLAST of Cp4.1LG00g02640 vs. TrEMBL
Match: D7TFS7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g02250 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.0e-106
Identity = 192/217 (88.48%), Postives = 198/217 (91.24%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           MS RRRTLLKVIVLGDSGVGKTSLMNQY            VHKKFSQQYKATIGADFVTK
Sbjct: 1   MSARRRTLLKVIVLGDSGVGKTSLMNQY------------VHKKFSQQYKATIGADFVTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM+SFDTLDNWH+EFL+
Sbjct: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLK 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           QANPSDP+TFPFILLGNKIDIDGGNSRVVS+KKA +WCASK NIPYFETSAKEDYNVDAA
Sbjct: 121 QANPSDPKTFPFILLGNKIDIDGGNSRVVSKKKAEDWCASKGNIPYFETSAKEDYNVDAA 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQRSGCAC 218
           FLCIAKTALANEHEQDIYFQGIPE V ETEQ  GCAC
Sbjct: 181 FLCIAKTALANEHEQDIYFQGIPEAVSETEQGGGCAC 205

[Close]

BLAST of Cp4.1LG00g02640 vs. TAIR10
Match: AT1G22740.1 (AT1G22740.1 RAB GTPase homolog G3B)

HSP 1 Score: 347.1 bits (889), Expect = 8.1e-96
Identity = 172/217 (79.26%), Postives = 184/217 (84.79%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           MS RRRTLLKVI+LGDSGVGKTSLMNQY            V+ KFSQQYKATIGADFVTK
Sbjct: 1   MSTRRRTLLKVIILGDSGVGKTSLMNQY------------VNNKFSQQYKATIGADFVTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSF++LDNWH+EFL 
Sbjct: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLT 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           +A+P DP  FPFILLGNK+DIDGGNSRVVSEKKAREWCA K NI YFETSAKEDYNVD +
Sbjct: 121 RASPRDPMAFPFILLGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDS 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQRSGCAC 218
           FLCI K ALANE +QDIYFQ  P+T    EQR GCAC
Sbjct: 181 FLCITKLALANERDQDIYFQ--PDTGSVPEQRGGCAC 203

[Close]

BLAST of Cp4.1LG00g02640 vs. TAIR10
Match: AT4G09720.3 (AT4G09720.3 RAB GTPase homolog G3A)

HSP 1 Score: 342.8 bits (878), Expect = 1.5e-94
Identity = 169/229 (73.80%), Postives = 188/229 (82.10%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           M+ RRRTLLKVIVLGDSGVGKTSLMNQY            VHKKFS QYKATIGADFVTK
Sbjct: 1   MATRRRTLLKVIVLGDSGVGKTSLMNQY------------VHKKFSMQYKATIGADFVTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           ELQI ++LVTLQIWDTAGQERFQSLG AFYRGADCC LVYDVNV++SFD L+ WH+EFL+
Sbjct: 61  ELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLK 120

Query: 121 QA-----------NPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFET 180
           QA           +PSDP+TFPFI+LGNKID+DGG+SRVVS+KKA +WCAS  NIPYFET
Sbjct: 121 QAWNIGMWTIAEASPSDPKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFET 180

Query: 181 SAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVETEQR-SGCAC 218
           SAK+D+NVD AFL IAKTALANEHEQDIYFQGIP+ V E E +  GCAC
Sbjct: 181 SAKDDFNVDEAFLTIAKTALANEHEQDIYFQGIPDAVTENEPKGGGCAC 217

[Close]

BLAST of Cp4.1LG00g02640 vs. TAIR10
Match: AT1G52280.1 (AT1G52280.1 RAB GTPase homolog G3D)

HSP 1 Score: 313.2 bits (801), Expect = 1.3e-85
Identity = 154/218 (70.64%), Postives = 173/218 (79.36%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           MS RRR LLKVI+LGDSGVGKTSLMNQ+            V++KFS QYKATIGADF+TK
Sbjct: 1   MSSRRRVLLKVIILGDSGVGKTSLMNQF------------VNRKFSNQYKATIGADFLTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           E+QIDDR+ TLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFD L+NW +EFL 
Sbjct: 61  EVQIDDRIFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLI 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           QA+PSDP  FPF++LGNK D+DGG SRVVSEKKA+ WCASK NIPYFETSAKE +NVDAA
Sbjct: 121 QASPSDPENFPFVVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAA 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQRS-GCAC 218
           F CI K A  NE E++ Y     +     +QRS GC C
Sbjct: 181 FECITKNAFKNEPEEEPYLPDTIDVAGGQQQRSTGCEC 206

[Close]

BLAST of Cp4.1LG00g02640 vs. TAIR10
Match: AT3G16100.1 (AT3G16100.1 RAB GTPase homolog G3C)

HSP 1 Score: 309.3 bits (791), Expect = 1.9e-84
Identity = 151/218 (69.27%), Postives = 174/218 (79.82%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           M+ RRR LLKVI+LGDSGVGKTSLMNQ+            V++KFS QYKATIGADF+TK
Sbjct: 1   MASRRRVLLKVIILGDSGVGKTSLMNQF------------VNRKFSNQYKATIGADFLTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           E+QIDDR+ TLQIWDTAGQERFQSLGVAFYRGADCCVLV DVNVMKSF+ L+NW +EFL 
Sbjct: 61  EVQIDDRIFTLQIWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLI 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           QA+PSDP  FPF++LGNK D+DGG SRVV+EKKA+ WCASK NIPYFETSAK+  NVDAA
Sbjct: 121 QASPSDPENFPFVVLGNKTDVDGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAA 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQRS-GCAC 218
           F CIAK AL NE E+++Y     +     +QRS GC C
Sbjct: 181 FECIAKNALKNEPEEEVYLPDTIDVAGARQQRSTGCEC 206

[Close]

BLAST of Cp4.1LG00g02640 vs. TAIR10
Match: AT2G21880.1 (AT2G21880.1 RAB GTPase homolog 7A)

HSP 1 Score: 308.1 bits (788), Expect = 4.2e-84
Identity = 152/222 (68.47%), Postives = 176/222 (79.28%), Query Frame = 1


Query: 2   SLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTKE 61
           SL+ RTLLKVIVLGDSGVGKTSLMNQY            V+KKF++QYKATIGADFVTKE
Sbjct: 3   SLKNRTLLKVIVLGDSGVGKTSLMNQY------------VYKKFNKQYKATIGADFVTKE 62

Query: 62  LQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLRQ 121
           L ID++ VTLQIWDTAGQERFQSLG AFYRGADCCVLVYDVN +KSF+TL+NWH EFL+Q
Sbjct: 63  LHIDEKSVTLQIWDTAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQ 122

Query: 122 ANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAAF 181
           ANP +P TFPF+L+GNK D+DGGNSRVVS K+A EWC SK NIPY ETSAKED N+D AF
Sbjct: 123 ANPMEPETFPFVLIGNKTDVDGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAF 182

Query: 182 LCIAKTALANEHEQ--DIYFQG----IPETVVETEQRSGCAC 218
           L +A  AL+NE +Q  DIY +G        +++ +Q  GCAC
Sbjct: 183 LSVAHIALSNERKQSNDIYPRGQYHDSVTDIIDPDQSRGCAC 212

[Close]

BLAST of Cp4.1LG00g02640 vs. NCBI nr
Match: gi|449444034|ref|XP_004139780.1| (PREDICTED: ras-related protein Rab7 isoform X1 [Cucumis sativus])

HSP 1 Score: 409.5 bits (1051), Expect = 3.8e-111
Identity = 201/217 (92.63%), Postives = 202/217 (93.09%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           MS RRRTLLKVIVLGDSGVGKTSLMNQY            VHKKFSQQYKATIGADFVTK
Sbjct: 1   MSFRRRTLLKVIVLGDSGVGKTSLMNQY------------VHKKFSQQYKATIGADFVTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR
Sbjct: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           QANP DPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASK+NIPYFETSAKEDYNVDAA
Sbjct: 121 QANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYFETSAKEDYNVDAA 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQRSGCAC 218
           FLCIAKTALANEHEQDIYFQGIPETVVETEQR GCAC
Sbjct: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQRGGCAC 205

[Close]

BLAST of Cp4.1LG00g02640 vs. NCBI nr
Match: gi|659093867|ref|XP_008447760.1| (PREDICTED: ras-related protein Rab7 isoform X2 [Cucumis melo])

HSP 1 Score: 405.6 bits (1041), Expect = 5.5e-110
Identity = 198/215 (92.09%), Postives = 201/215 (93.49%), Query Frame = 1


Query: 3   LRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTKEL 62
           ++RRTLLKVIVLGDSGVGKTSLMNQY            VHKKFSQQYKATIGADFVTKEL
Sbjct: 1   MKRRTLLKVIVLGDSGVGKTSLMNQY------------VHKKFSQQYKATIGADFVTKEL 60

Query: 63  QIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLRQA 122
           QIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLRQA
Sbjct: 61  QIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLRQA 120

Query: 123 NPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAAFL 182
           NP DPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASK+NIPYFETSAKEDYNVDAAFL
Sbjct: 121 NPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYFETSAKEDYNVDAAFL 180

Query: 183 CIAKTALANEHEQDIYFQGIPETVVETEQRSGCAC 218
           CIAKTALANEHEQDIYFQGIPETVVETEQR GCAC
Sbjct: 181 CIAKTALANEHEQDIYFQGIPETVVETEQRGGCAC 203

[Close]

BLAST of Cp4.1LG00g02640 vs. NCBI nr
Match: gi|823228782|ref|XP_012447136.1| (PREDICTED: ras-related protein Rab7 [Gossypium raimondii])

HSP 1 Score: 395.6 bits (1015), Expect = 5.6e-107
Identity = 193/217 (88.94%), Postives = 199/217 (91.71%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           MS+RRRTLLKVIVLGDSGVGKTSLMNQY            VHKKFSQQYKATIGADFVTK
Sbjct: 1   MSMRRRTLLKVIVLGDSGVGKTSLMNQY------------VHKKFSQQYKATIGADFVTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFL+
Sbjct: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLK 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           QANP+DPRTFPFILLGNKIDIDGGNSRVVSEKKA++WCASK N+PYFETSAKED NVDAA
Sbjct: 121 QANPADPRTFPFILLGNKIDIDGGNSRVVSEKKAKDWCASKGNMPYFETSAKEDINVDAA 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQRSGCAC 218
           FLCIAKTALANE EQDIYFQGIPE V ETEQR GCAC
Sbjct: 181 FLCIAKTALANEREQDIYFQGIPEAVTETEQRGGCAC 205

[Close]

BLAST of Cp4.1LG00g02640 vs. NCBI nr
Match: gi|1009137871|ref|XP_015886287.1| (PREDICTED: ras-related protein Rab7 [Ziziphus jujuba])

HSP 1 Score: 394.4 bits (1012), Expect = 1.3e-106
Identity = 192/217 (88.48%), Postives = 199/217 (91.71%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           MS+RRRTLLKVIVLGDSGVGKTSLMNQY            VHKKFSQQYKATIGADFVTK
Sbjct: 3   MSVRRRTLLKVIVLGDSGVGKTSLMNQY------------VHKKFSQQYKATIGADFVTK 62

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVM+SFDTLD WH+EFL+
Sbjct: 63  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDTWHEEFLK 122

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           QANPSDPR FPFILLGNKIDIDGGNSRVVSEKKA+EWCASK NIPYFETSAKEDYNVDAA
Sbjct: 123 QANPSDPRAFPFILLGNKIDIDGGNSRVVSEKKAKEWCASKGNIPYFETSAKEDYNVDAA 182

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQRSGCAC 218
           FLCIAKTAL+NEHEQDIYFQGIPE V E+EQR GCAC
Sbjct: 183 FLCIAKTALSNEHEQDIYFQGIPEAVPESEQRGGCAC 207

[Close]

BLAST of Cp4.1LG00g02640 vs. NCBI nr
Match: gi|595801623|ref|XP_007201851.1| (hypothetical protein PRUPE_ppa011579mg [Prunus persica])

HSP 1 Score: 393.7 bits (1010), Expect = 2.1e-106
Identity = 191/217 (88.02%), Postives = 199/217 (91.71%), Query Frame = 1


Query: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTK 60
           MSLRRRTLLKVIVLGDSGVGKTSLMNQY            VHKKFSQQYKATIGADFVTK
Sbjct: 1   MSLRRRTLLKVIVLGDSGVGKTSLMNQY------------VHKKFSQQYKATIGADFVTK 60

Query: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLR 120
           ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTL+NWH+EFL+
Sbjct: 61  ELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLK 120

Query: 121 QANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAA 180
           QANP DP+TFPFILLGNKIDIDGGNSRVVSEKKA++WC SK NIPYFETSAKEDYNVDAA
Sbjct: 121 QANPPDPKTFPFILLGNKIDIDGGNSRVVSEKKAKDWCTSKGNIPYFETSAKEDYNVDAA 180

Query: 181 FLCIAKTALANEHEQDIYFQGIPETVVETEQRSGCAC 218
           FLCIAKTALANEHEQDIYFQGIPE V E++QR GCAC
Sbjct: 181 FLCIAKTALANEHEQDIYFQGIPEAVSESDQRGGCAC 205

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g02640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAB7_SOYBN	1.9e-107	88.07	Ras-related protein Rab7 OS=Glycine max PE=2 SV=1	[more]
RAB7_VIGAC	4.3e-107	87.61	Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1	[more]
RAG3A_ARATH	7.6e-96	77.52	Ras-related protein RABG3a OS=Arabidopsis thaliana GN=RABG3A PE=2 SV=1	[more]
RAG3B_ARATH	1.4e-94	79.26	Ras-related protein RABG3b OS=Arabidopsis thaliana GN=RABG3B PE=1 SV=1	[more]
RAB7_GOSHI	9.4e-86	70.27	Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1	[more]

BLAST of Cp4.1LG00g02640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5B9_CUCSA	2.6e-111	92.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G206950 PE=4 SV=1	[more]
A0A0D2QNE8_GOSRA	3.9e-107	88.94	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G259500 PE=4 SV=1	[more]
M5W8B5_PRUPE	1.5e-106	88.02	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011579mg PE=4 SV=1	[more]
A0A068TXU8_COFCA	1.5e-106	88.48	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00034663001 PE=4 SV=1	[more]
D7TFS7_VITVI	2.0e-106	88.48	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g02250 PE=4 SV=...	[more]

BLAST of Cp4.1LG00g02640 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22740.1	8.1e-96	79.26	RAB GTPase homolog G3B	[more]
AT4G09720.3	1.5e-94	73.80	RAB GTPase homolog G3A	[more]
AT1G52280.1	1.3e-85	70.64	RAB GTPase homolog G3D	[more]
AT3G16100.1	1.9e-84	69.27	RAB GTPase homolog G3C	[more]
AT2G21880.1	4.2e-84	68.47	RAB GTPase homolog 7A	[more]

BLAST of Cp4.1LG00g02640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444034\|ref\|XP_004139780.1\|	3.8e-111	92.63	PREDICTED: ras-related protein Rab7 isoform X1 [Cucumis sativus]	[more]
gi\|659093867\|ref\|XP_008447760.1\|	5.5e-110	92.09	PREDICTED: ras-related protein Rab7 isoform X2 [Cucumis melo]	[more]
gi\|823228782\|ref\|XP_012447136.1\|	5.6e-107	88.94	PREDICTED: ras-related protein Rab7 [Gossypium raimondii]	[more]
gi\|1009137871\|ref\|XP_015886287.1\|	1.3e-106	88.48	PREDICTED: ras-related protein Rab7 [Ziziphus jujuba]	[more]
gi\|595801623\|ref\|XP_007201851.1\|	2.1e-106	88.02	hypothetical protein PRUPE_ppa011579mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006687	glycosphingolipid metabolic process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004767	sphingomyelin phosphodiesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g02640.1	Cp4.1LG00g02640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 10..188 score: 1.6
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 9..182 score: 4.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 6..198 score: 9.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 5..195 score: 7.07
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 44..60 score: 1.0E-38coord: 128..141 score: 1.0E-38coord: 166..188 score: 1.0E-38coord: 9..30 score: 1.0E-38coord: 62..84 score: 1.0
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 1..217 score: 1.9E
None	No IPR available	PANTHER	PTHR24073:SF586	RAS-RELATED PROTEIN RABG3A	coord: 1..217 score: 1.9E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 6..191 score: 2.8
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 11..191 score: 8.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 9..191 score: 3.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 14..217 score: 4.
None	No IPR available	PROFILE	PS51419	RAB	coord: 4..217 score: 30

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG00g02640	CmaCh01G009470	Cucurbita maxima (Rimu)	cmacpeB457
Cp4.1LG00g02640	CmoCh01G009870	Cucurbita moschata (Rifu)	cmocpeB418
Cp4.1LG00g02640	Bhi09G001365	Wax gourd	cpewgoB0017
Cp4.1LG00g02640	CsGy7G009180	Cucumber (Gy14) v2	cgybcpeB895
Cp4.1LG00g02640	Carg25823	Silver-seed gourd	carcpeB1484

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG00g02640	Cucurbita maxima (Rimu)	cmacpeB025