Cp4.1LG00g02640.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATCTGTCCCTTGAAATGGAATCAGCTGGAAAGAAGAGAAGGAGAAGGATAAAACGGAGAGGACATCACAGAAGTCGCGTAGGTGTCGTTTGGTTGTTCTTCCAATTTTTGAATTTCAGCTTCCTTTTCTCTAAGTCTCGCCACGAATCTCCTCCTTGAATTTATTCTCCTTCTTTTCCCTTTGCTAATCGGATGAAAAGGTACTCTAAATTCCGAATCTAAAATTCTGATATCCGCTCCCCTTTTTGCTCATCATCACCCCCTTTTGATTCTTTTCTTTCCATTTCATTTCTCAACTTCGATTCATTACGTTATTGATTCATTCACCATATCTCCCATTACCCAGGGTGCGAAACTAGCTCACAGGGTCAAATTTTGCGCTATTTGAATCCGAGGTTTATTAGTCTCATTCGCTGATTCATTCATTCATTGATTTTGTATCCATGTCGCTCCGTAGACGGACTTTGCTTAAGGTTATCGTTCTCGGTGATAGCGGGTATGTGCAATCATCACCTATGGTTCCTCTGCTGCTTGCTTGTTTCATTTTGGATTTTGATTTGAATGGTGTTTGATTTTGATTTCAGGGTTGGTAAGACGTCGTTGATGAATCAGTATCCTTCGAAAATTTTGTTGATAATGGTATTGATCTAAGTTTTGAGCATTTATTTTCGATCCTGGAATTTATGTTTCACTTCCTCTTATTTTGCCATTCATTTCCTAATTGGGTACGCCCCTTGCTTCAGTTCATGTGGAATATTGAGATTAATCATCTTCTGTTGGTGAGAGATCTTTGAATAATTTGTGTTTTCTTTGGTTTTAATTTTGTTTGACCATTTGTTTCTATATTCTCCTCGGAATTAGTTCTAACACATAGCTTATTGAGATTTTGATCCGTTGGAAATTGATGTTGAATTAGCATTACCGTTGAATTGGAATATGGGGCCTTAACTAGCCATTTAGATATGTGCATAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCTGATTTTGTCACCAAGGAACTTCAAATTGATGACAGGCTTGTCACACTACAAGTACGTTCTACTTCATAAAATCATTTCCTTTCAATAGCGTGGAGGCTGTGTTCACTTTGGCATGATTTTGTTCTCATGTTTATACTATATCTATAACATTTGCATTGCTAGATATGGGACACGGCCGGACAAGAGAGGTTTCAAAGTCTTGGAGTTGCATTCTATAGAGGGGCAGATTGCTGTGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTCGACACACTTGACAATTGGCATGATGAGTTTCTCAGACAGGTGAATCAATTCTGTTCCTTAAATTTTCTCGATTTTTCTGATGGATGTATTCGCTGTTGAGCTTGGTTATTACTGCTCTGTTACTAGGAAGTTTTATTATGGTTTGGGGTTGTTGTTTTAGTTCGATTTTTAAGATTTATATACTTCGTATGGTTTGGGGTTGTTGTTTTAGGTCTTAATTTAAATAGCTAATGTACAACCTTTGCTCCTTTAAGCTTTTTCCAAACACCTTTAGAGGTCTTTGTGTATTATAAACCGTGCTACTACCTTAAGTCGAGGAACAACCACCTCGGAAGCCATTTGTGCCTGGCTTGTAAATATTGTTTTGGCCTTTGAATGAGTGGCATTCTTCATTCTGGCGTGTACCCGTTTCTTTACCTTTGCAAGGCTATACCCTGCCTCTTCATTTTCCTCTTCTCATTGTCAAAGTATGGTTTTAATTGGATTACACTGCCATGCATGGTGTCGCTGAGATAATCATTGATGCTTCTTAGATTAAAGGACAATGATGTCTGAAAGCAGATTTTTACTCGCAAAAAACACTGAAGGCATATATGATCCATTAGAGAATTAAAAGAAAGATACTAGTAAATACATGCGCTCGTAGCTCTCCATGTATGCTTAGGCTGTTCGAGTTTGAGTGTGTTTATTTGTACTGATCTTTTTCTTTATTTCGAGTCTCGATTGCTTGCAGATTTTGGATGATGTCTAAATTAGTATTTTGTCTTTCAGGCAAACCCATCTGACCCCAGGACGTTCCCATTCATATTACTCGGAAATAAGATCGACATTGATGGTGGGAATAGTCGAGTGGTAAGCTATAAGGATGTCTGAACCTGTCACTTCTGAGATGTGTATTTTGTTTTTATGTTGATCTGATTATTATTACTGTAGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGATAATATTCCTTACTTCGAGACATCGGCTAAAGAAGACTACAACGTTGATGCTGCTTTCTTATGCATTGCCAAGACTGCATTAGCCAACGAACACGAACAGGATATGTAAGTTTCTAAAACGTGAATTTTGTCGAAAGGATTTATTGGAATGTTATTAGGATTTTAAGAGTTTCTAAAACGTAGCATTTACCTTGTGACGTTATCGGAAAGAATCGAGCTAATACAACTGAATTTGGCATGGTAGTTATTAAATATTCTATTCCATCGATTATTTCCATTTTATCGGTTATGTGTAAATTACCTCGGAATTTCAACATTTTTTTTGTGATTAGAGTTGCCATGAAATCTGTGTTTGTGTTTTATTTTTGGTGGTGTCCTCATTTGCCATACTTTTATGATGTTGCATATTCTATTTTTCATTACAAGACTTTGGACGAGACCGAAAAACACCAACGCCTTACTGATCATGAATGTAATGCAGATATTTTCAAGGAATCCCCGAAACCGTTGTGGAGACCGAGCAAAGGAGTGGCTGTGCATGCTGAATTTAGGAACTGAGAGACTCGGGAGCTCTCGTTCCTGGTCTTTTGGTTCGAATTCTTACACAATTTTTCTGGCATTGTGATTCATAGCTAATCTTTTGATTGCAGACCACCACCCTCTGTTCCATAACCTAACCACAGAGACTTGAATTTCATGTTATTTTTTTGTTGAAGAAATTAGCTTTCTTTTTGGTTAGGTAAGAACTTTGGGGAACCCTGAGTTTGTAGGATCCATTATTTCAAGGATCCTCACCAATCCAGTGTTCCTGAGTTGATAGTTCCTTTTTTTTTTTTTTTTTTCCCTTCTCGGGGTTGAGAAGAACACAATGGTGATTATCTCACATGTTCAGCTCGTTTCTTTGATGTATTTTATTCTTAATTCTCTTGTGGCTTCCTCTCCCATTTGAACTATTGTGGCTAAATGTTGTAGGAGACATGAGATGGGAAGGTATAGCCGCACCATGAGGTAAAGCCAAACAAGTCCAACAATCCCCTTAAGACTTGTCATCATACCAAGATTATCGTATAATTAATCTGATCCCAACGCTATTAATACCTAAATTATCAAC AAAATCTGTCCCTTGAAATGGAATCAGCTGGAAAGAAGAGAAGGAGAAGGATAAAACGGAGAGGACATCACAGAAGTCGCGTAGGTGTCGTTTGGTTGTTCTTCCAATTTTTGAATTTCAGCTTCCTTTTCTCTAAGTCTCGCCACGAATCTCCTCCTTGAATTTATTCTCCTTCTTTTCCCTTTGCTAATCGGATGAAAAGGGTGCGAAACTAGCTCACAGGGTCAAATTTTGCGCTATTTGAATCCGAGGTTTATTAGTCTCATTCGCTGATTCATTCATTCATTGATTTTGTATCCATGTCGCTCCGTAGACGGACTTTGCTTAAGGTTATCGTTCTCGGTGATAGCGGGGTTGGTAAGACGTCGTTGATGAATCAGTATCCTTCGAAAATTTTGTTGATAATGCCATTTAGATATGTGCATAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCTGATTTTGTCACCAAGGAACTTCAAATTGATGACAGGCTTGTCACACTACAAATATGGGACACGGCCGGACAAGAGAGGTTTCAAAGTCTTGGAGTTGCATTCTATAGAGGGGCAGATTGCTGTGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTCGACACACTTGACAATTGGCATGATGAGTTTCTCAGACAGGCAAACCCATCTGACCCCAGGACGTTCCCATTCATATTACTCGGAAATAAGATCGACATTGATGGTGGGAATAGTCGAGTGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGATAATATTCCTTACTTCGAGACATCGGCTAAAGAAGACTACAACGTTGATGCTGCTTTCTTATGCATTGCCAAGACTGCATTAGCCAACGAACACGAACAGGATATATATTTTCAAGGAATCCCCGAAACCGTTGTGGAGACCGAGCAAAGGAGTGGCTGTGCATGCTGAATTTAGGAACTGAGAGACTCGGGAGCTCTCGTTCCTGGTCTTTTGGTTCGAATTCTTACACAATTTTTCTGGCATTGTGATTCATAGCTAATCTTTTGATTGCAGACCACCACCCTCTGTTCCATAACCTAACCACAGAGACTTGAATTTCATGTTATTTTTTTGTTGAAGAAATTAGCTTTCTTTTTGGTTAGGTAAGAACTTTGGGGAACCCTGAGTTTGTAGGATCCATTATTTCAAGGATCCTCACCAATCCAGTGTTCCTGAGTTGATAGTTCCTTTTTTTTTTTTTTTTTTCCCTTCTCGGGGTTGAGAAGAACACAATGGTGATTATCTCACATGTTCAGCTCGTTTCTTTGATGTATTTTATTCTTAATTCTCTTGTGGCTTCCTCTCCCATTTGAACTATTGTGGCTAAATGTTGTAGGAGACATGAGATGGGAAGGTATAGCCGCACCATGAGGTAAAGCCAAACAAGTCCAACAATCCCCTTAAGACTTGTCATCATACCAAGATTATCGTATAATTAATCTGATCCCAACGCTATTAATACCTAAATTATCAAC ATGTCGCTCCGTAGACGGACTTTGCTTAAGGTTATCGTTCTCGGTGATAGCGGGGTTGGTAAGACGTCGTTGATGAATCAGTATCCTTCGAAAATTTTGTTGATAATGCCATTTAGATATGTGCATAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCTGATTTTGTCACCAAGGAACTTCAAATTGATGACAGGCTTGTCACACTACAAATATGGGACACGGCCGGACAAGAGAGGTTTCAAAGTCTTGGAGTTGCATTCTATAGAGGGGCAGATTGCTGTGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTCGACACACTTGACAATTGGCATGATGAGTTTCTCAGACAGGCAAACCCATCTGACCCCAGGACGTTCCCATTCATATTACTCGGAAATAAGATCGACATTGATGGTGGGAATAGTCGAGTGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGATAATATTCCTTACTTCGAGACATCGGCTAAAGAAGACTACAACGTTGATGCTGCTTTCTTATGCATTGCCAAGACTGCATTAGCCAACGAACACGAACAGGATATATATTTTCAAGGAATCCCCGAAACCGTTGTGGAGACCGAGCAAAGGAGTGGCTGTGCATGCTGA MSLRRRTLLKVIVLGDSGVGKTSLMNQYPSKILLIMPFRYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLRQANPSDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKDNIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVETEQRSGCAC
BLAST of Cp4.1LG00g02640.1 vs. Swiss-Prot
Match: RAB7_SOYBN (Ras-related protein Rab7 OS=Glycine max PE=2 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 1.9e-107 Identity = 192/218 (88.07%), Postives = 198/218 (90.83%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. Swiss-Prot
Match: RAB7_VIGAC (Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 4.3e-107 Identity = 191/218 (87.61%), Postives = 198/218 (90.83%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. Swiss-Prot
Match: RAG3A_ARATH (Ras-related protein RABG3a OS=Arabidopsis thaliana GN=RABG3A PE=2 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 7.6e-96 Identity = 169/218 (77.52%), Postives = 188/218 (86.24%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. Swiss-Prot
Match: RAG3B_ARATH (Ras-related protein RABG3b OS=Arabidopsis thaliana GN=RABG3B PE=1 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 1.4e-94 Identity = 172/217 (79.26%), Postives = 184/217 (84.79%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. Swiss-Prot
Match: RAB7_GOSHI (Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 9.4e-86 Identity = 156/222 (70.27%), Postives = 180/222 (81.08%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. TrEMBL
Match: A0A0A0K5B9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G206950 PE=4 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 2.6e-111 Identity = 201/217 (92.63%), Postives = 202/217 (93.09%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. TrEMBL
Match: A0A0D2QNE8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G259500 PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 3.9e-107 Identity = 193/217 (88.94%), Postives = 199/217 (91.71%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. TrEMBL
Match: M5W8B5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011579mg PE=4 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 1.5e-106 Identity = 191/217 (88.02%), Postives = 199/217 (91.71%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. TrEMBL
Match: A0A068TXU8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00034663001 PE=4 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 1.5e-106 Identity = 192/217 (88.48%), Postives = 197/217 (90.78%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. TrEMBL
Match: D7TFS7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g02250 PE=4 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 2.0e-106 Identity = 192/217 (88.48%), Postives = 198/217 (91.24%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. TAIR10
Match: AT1G22740.1 (AT1G22740.1 RAB GTPase homolog G3B) HSP 1 Score: 347.1 bits (889), Expect = 8.1e-96 Identity = 172/217 (79.26%), Postives = 184/217 (84.79%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. TAIR10
Match: AT4G09720.3 (AT4G09720.3 RAB GTPase homolog G3A) HSP 1 Score: 342.8 bits (878), Expect = 1.5e-94 Identity = 169/229 (73.80%), Postives = 188/229 (82.10%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. TAIR10
Match: AT1G52280.1 (AT1G52280.1 RAB GTPase homolog G3D) HSP 1 Score: 313.2 bits (801), Expect = 1.3e-85 Identity = 154/218 (70.64%), Postives = 173/218 (79.36%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. TAIR10
Match: AT3G16100.1 (AT3G16100.1 RAB GTPase homolog G3C) HSP 1 Score: 309.3 bits (791), Expect = 1.9e-84 Identity = 151/218 (69.27%), Postives = 174/218 (79.82%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. TAIR10
Match: AT2G21880.1 (AT2G21880.1 RAB GTPase homolog 7A) HSP 1 Score: 308.1 bits (788), Expect = 4.2e-84 Identity = 152/222 (68.47%), Postives = 176/222 (79.28%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. NCBI nr
Match: gi|449444034|ref|XP_004139780.1| (PREDICTED: ras-related protein Rab7 isoform X1 [Cucumis sativus]) HSP 1 Score: 409.5 bits (1051), Expect = 3.8e-111 Identity = 201/217 (92.63%), Postives = 202/217 (93.09%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. NCBI nr
Match: gi|659093867|ref|XP_008447760.1| (PREDICTED: ras-related protein Rab7 isoform X2 [Cucumis melo]) HSP 1 Score: 405.6 bits (1041), Expect = 5.5e-110 Identity = 198/215 (92.09%), Postives = 201/215 (93.49%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. NCBI nr
Match: gi|823228782|ref|XP_012447136.1| (PREDICTED: ras-related protein Rab7 [Gossypium raimondii]) HSP 1 Score: 395.6 bits (1015), Expect = 5.6e-107 Identity = 193/217 (88.94%), Postives = 199/217 (91.71%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. NCBI nr
Match: gi|1009137871|ref|XP_015886287.1| (PREDICTED: ras-related protein Rab7 [Ziziphus jujuba]) HSP 1 Score: 394.4 bits (1012), Expect = 1.3e-106 Identity = 192/217 (88.48%), Postives = 199/217 (91.71%), Query Frame = 1
BLAST of Cp4.1LG00g02640.1 vs. NCBI nr
Match: gi|595801623|ref|XP_007201851.1| (hypothetical protein PRUPE_ppa011579mg [Prunus persica]) HSP 1 Score: 393.7 bits (1010), Expect = 2.1e-106 Identity = 191/217 (88.02%), Postives = 199/217 (91.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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