Cp4.1LG00g01530 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG00g01530
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTranscription factor
LocationCp4.1LG00 : 3840837 .. 3842164 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATTAATATTTTACACGTACACTCATGAATGGTACCAAAGATGACTTCGACCCATCTGAATTTCTGATCTTTTGGTCAAACATAAATGTTTTTCTTCGTTGACTTTTTGATCGGGATTGAACGTTTTGTTAATTCAGTAACATATCGATGTACGAATTGGAAGCGTTAAGATTTGAATCGATAATATAATAAAGTTCGTAAAGAAGAAAGAAGAAAAAAGAAGAGAAGAAGAAGATCTTATGAATCTATTTTAAGAAAAGAAATTACACCTAACAGAATTTACGCTTATTTCTATCTTCCTTTCAAATTTATTTATTTGTTTGTTTGTAGTTTTTTCTTTTTCCATTTTGAACCAATTTTTTTTACCTTTTTTTACCTTTTTACTGTTTTATTTTCTTTGAATGTCATTGAAATTTGTTCTATCTTCCAGTTGAAAGGTATGATTTTTACTGCGACTGAAGCTGTAAAATTATGTTAAATTACCGTTTTTACTGTGTCATGAAATGAATGCAGTTCATGGAGGTCTATGGCGAGCACAGAGCCTCTAAATTTGGTGATGATGATGTTCTTGTGGATGTCAATGGTGGCAGCTTGGCTGATAGACGAGCTTCCAAGAGAGGGAGAAATGGGTTCAATATCGCTATGGCTCGGTGCCCGTTGGGTTCGTCGATGGTTCGATCTCCTTTCCTCACAATTCCTTCCGGGTTTAGCCCGACCGTGTTGCTTGATTCGCCGATTATGTTGCTCAATACCCATGTGAGATTTCTTCTTTCTTCTTGTTTTCTTGTGATTTGAACATCTGATCTTGAGGAATGATCAGATCTGGTGAACGAATGAGCTAATCGGGAATGTTTTGTTATTGAAATCGTATGGATCTCTTGTTGGGTTGTTTTAATTTTATGAAGAAATCTTAACCGTAGAGGTATTTGATCTCGTTCTAGATTGGGATGATGTTTGGAGGATGAATTCTTCGAACTAGCTAGGGTTAATAAGAGCTAACGTAAATGATAAAAGGTTTCGAAGAAATGGATTCGGTTGGTTTGTGAACTAATAGATTTGATTGGATTGGATCGGATGTTATGTCAGGACATTCCATCTCCAACAACGGGCACTTTTCCGATACATTCCATAAAGGATGAGAATTCGTTGTTGAATCCTATCATGCTTGAAGATGGGAGTAGCTATGGCAGTGAGGATTCGTACTACAGGTTCACGCCTCGTGGGGAGCTCCGGCTTGGAAATCAGGTAATTGATGCTAATATTTCTTTTATACGCTATAATTTTGTCGAATGTGTGAACGAGAAGGCATTGCTTCTCGAGTAA

mRNA sequence

ATGGGTATGATTTTTACTGCGACTGAAGCTTTCATGGAGGTCTATGGCGAGCACAGAGCCTCTAAATTTGGTGATGATGATGTTCTTGTGGATGTCAATGGTGGCAGCTTGGCTGATAGACGAGCTTCCAAGAGAGGGAGAAATGGGTTCAATATCGCTATGGCTCGGTGCCCGTTGGGTTCGTCGATGGTTCGATCTCCTTTCCTCACAATTCCTTCCGGGTTTAGCCCGACCGTGTTGCTTGATTCGCCGATTATGTTGCTCAATACCCATGACATTCCATCTCCAACAACGGGCACTTTTCCGATACATTCCATAAAGGATGAGAATTCGTTGTTGAATCCTATCATGCTTGAAGATGGGAGTAGCTATGGCAGTGAGGATTCGTACTACAGGTTCACGCCTCGTGGGGAGCTCCGGCTTGGAAATCAGGTAATTGATGCTAATATTTCTTTTATACGCTATAATTTTGTCGAATGTGTGAACGAGAAGGCATTGCTTCTCGAGTAA

Coding sequence (CDS)

ATGGGTATGATTTTTACTGCGACTGAAGCTTTCATGGAGGTCTATGGCGAGCACAGAGCCTCTAAATTTGGTGATGATGATGTTCTTGTGGATGTCAATGGTGGCAGCTTGGCTGATAGACGAGCTTCCAAGAGAGGGAGAAATGGGTTCAATATCGCTATGGCTCGGTGCCCGTTGGGTTCGTCGATGGTTCGATCTCCTTTCCTCACAATTCCTTCCGGGTTTAGCCCGACCGTGTTGCTTGATTCGCCGATTATGTTGCTCAATACCCATGACATTCCATCTCCAACAACGGGCACTTTTCCGATACATTCCATAAAGGATGAGAATTCGTTGTTGAATCCTATCATGCTTGAAGATGGGAGTAGCTATGGCAGTGAGGATTCGTACTACAGGTTCACGCCTCGTGGGGAGCTCCGGCTTGGAAATCAGGTAATTGATGCTAATATTTCTTTTATACGCTATAATTTTGTCGAATGTGTGAACGAGAAGGCATTGCTTCTCGAGTAA

Protein sequence

MGMIFTATEAFMEVYGEHRASKFGDDDVLVDVNGGSLADRRASKRGRNGFNIAMARCPLGSSMVRSPFLTIPSGFSPTVLLDSPIMLLNTHDIPSPTTGTFPIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGELRLGNQVIDANISFIRYNFVECVNEKALLLE
Homology
[Close]
BLAST of Cp4.1LG00g01530 vs. Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 5.7e-06
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 1 

Query: 66  SPFLTIPSGFSPTVLLDSPIMLLNTHDIPSPTTGTFPIHSIK-DENSLL---NPIMLED 121
           SP+ T+P G +P   LDSP++  +++ +PSPTTGTFP  S+  + N LL   N I  ED
Sbjct: 26  SPYFTMPPGLTPADFLDSPLLFTSSNILPSPTTGTFPAQSLNYNNNGLLIDKNEIKYED 84

[Close]
BLAST of Cp4.1LG00g01530 vs. TrEMBL
Match: A0A0A0M0L1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G657480 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.2e-31
Identity = 79/160 (49.38%), Postives = 105/160 (65.62%), Query Frame = 1 

Query: 25  DDDVLVDVNGGSLADRRASKRGRNGFNIAMARCPLGSSMVRSPFLTIPSGFSPTVLLDSP 84
           DD VLVD N GS A  R SKR RNG+   +      S ++ SP LTIP G +PT+LLDSP
Sbjct: 9   DDGVLVDANAGSFAQSRPSKRRRNGW---IPTKDSHSPILSSPSLTIPPGINPTLLLDSP 68

Query: 85  IMLLNTHDIPSPTTGTF-PIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGEL---- 144
           +MLLNT D+PSPTTGTF PIH IKDE SLLNP+M EDG S+GSEDS++RF P+GEL    
Sbjct: 69  VMLLNTQDLPSPTTGTFPPIHQIKDEQSLLNPVMPEDGISHGSEDSFFRFAPQGELCTLQ 128

Query: 145 ----------RLGNQVIDANISFIRYNFVECVNEKALLLE 170
                      + +Q +++  + + + FV  + ++A +L+
Sbjct: 129 SLLRIENQEAEIDHQALESEKTLMDFEFVPDIPKEAAVLK 165

[Close]
BLAST of Cp4.1LG00g01530 vs. TrEMBL
Match: W9S6X4_9ROSA (Putative WRKY transcription factor 2 OS=Morus notabilis GN=L484_015130 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-14
Identity = 57/124 (45.97%), Postives = 71/124 (57.26%), Query Frame = 1 

Query: 36  SLADRRASKRGRNGFNIAMAR----CPLGSSMVRSPFLTIPSGFSPTVLLDSPIMLLNTH 95
           S+A+RRA+K G N   I+  R     PL S   RSP LTIP G SPT LLDSPIML NT 
Sbjct: 38  SIAERRAAKFGFNAVKISTPRFRTTSPLASPAARSPCLTIPEGISPTALLDSPIMLPNTQ 97

Query: 96  DIPSPTTGTFPIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGELR-------LGNQ 149
            +PSPTTG F + +   E+S+L+    E  +   + DS +RF P GE +        GNQ
Sbjct: 98  VLPSPTTGKFLLPTFSQESSILHSTTREYLNKGNAIDS-FRFKPYGENKSPPRCSSFGNQ 157

[Close]
BLAST of Cp4.1LG00g01530 vs. TrEMBL
Match: M9TNR1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=WRKY10 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-13
Identity = 52/118 (44.07%), Postives = 67/118 (56.78%), Query Frame = 1 

Query: 26  DDVLVDVNGGSLADRRASKRGRNGFNIAMAR--------CPLGSSMVRSPFLTIPSGFSP 85
           DD       GS+A+RRA+K G     I  AR         P  +++VRSP +TIP G SP
Sbjct: 42  DDASGTAIRGSIAERRAAKCGFKAERINTARFRTTSPLNSPAATALVRSPCITIPPGISP 101

Query: 86  TVLLDSPIMLLNTHDIPSPTTGTFPIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTP 136
           T LLDSPIML N+   PSPTTGTFP+  +  E+ +LN +   DG   G +   +RF P
Sbjct: 102 TALLDSPIMLPNSQ--PSPTTGTFPLPLLNYESPMLNTVTSADGDE-GCDSGSFRFKP 156

[Close]
BLAST of Cp4.1LG00g01530 vs. TrEMBL
Match: B9I7F0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s08380g PE=4 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.5e-13
Identity = 51/98 (52.04%), Postives = 65/98 (66.33%), Query Frame = 1 

Query: 34  GGSLADRRASKRG----RNGFNIAMARC--PLGSSMVRSPFLTIPSGFSPTVLLDSPIML 93
           G S+A+RRA+K G        N A  R   PL +S +RSPF+TIPSG SPT LLDSPIML
Sbjct: 34  GISIAERRAAKCGFKMKAERINTARFRTTSPL-TSPLRSPFITIPSGISPTALLDSPIML 93

Query: 94  LNTHDIPSPTTGTFPIHSIKDENSLLNPIMLEDGSSYG 126
            N+H  PSPTTGTFP+  +K E+   NPI ++  + +G
Sbjct: 94  SNSHVQPSPTTGTFPLSPLKYESESFNPIYVQRETIHG 130

[Close]
BLAST of Cp4.1LG00g01530 vs. TrEMBL
Match: M5WG22_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppb022557mg PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.5e-13
Identity = 50/106 (47.17%), Postives = 65/106 (61.32%), Query Frame = 1 

Query: 36  SLADRRASKRGRNGFNIAMAR------CPLGSSMVRSPFLTIPSGFSPTVLLDSPIMLLN 95
           S+A+RRA+K G N   I  AR       P  ++  RSP LTIP G SPT LLDSP+ML N
Sbjct: 42  SIAERRAAKCGFNAERINTARFRTTSPLPSPAAAARSPCLTIPPGISPTALLDSPMMLPN 101

Query: 96  THDIPSPTTGTFPIHSIKDENSLLNPIMLED---GSSYGSEDSYYR 133
           +  +PSPTTGTFP+    D++S+L     ED   GS +GS  ++ R
Sbjct: 102 SQALPSPTTGTFPLLPPSDDSSVLKSGTHEDGHRGSDFGSSFTFKR 147

[Close]
BLAST of Cp4.1LG00g01530 vs. TAIR10
Match: AT5G07100.1 (AT5G07100.1 WRKY DNA-binding protein 26)

HSP 1 Score: 52.4 bits (124), Expect = 3.2e-07
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 1 

Query: 66  SPFLTIPSGFSPTVLLDSPIMLLNTHDIPSPTTGTFPIHSIK-DENSLL---NPIMLED 121
           SP+ T+P G +P   LDSP++  +++ +PSPTTGTFP  S+  + N LL   N I  ED
Sbjct: 26  SPYFTMPPGLTPADFLDSPLLFTSSNILPSPTTGTFPAQSLNYNNNGLLIDKNEIKYED 84

[Close]
BLAST of Cp4.1LG00g01530 vs. TAIR10
Match: AT5G56270.1 (AT5G56270.1 WRKY DNA-binding protein 2)

HSP 1 Score: 48.5 bits (114), Expect = 4.6e-06
Identity = 35/92 (38.04%), Postives = 46/92 (50.00%), Query Frame = 1 

Query: 17  EHRASKFGDDDVLVDVNGGSLADRRASKRGRNGFNIAMARCPLGS-----SMVRSPFLTI 76
           E  +S    D    +V  G L++R A++ G N   +        +     S +RSP LTI
Sbjct: 55  EDTSSNHNKDSSQSNVFRGGLSERIAARAGFNAPRLNTENIRTNTDFSIDSNLRSPCLTI 114

Query: 77  PS-GFSPTVLLDSPIMLLNTHDIPSPTTGTFP 103
            S G SP  LL+SP+ L N    PSPTTG FP
Sbjct: 115 SSPGLSPATLLESPVFLSNPLAQPSPTTGKFP 146

[Close]
BLAST of Cp4.1LG00g01530 vs. NCBI nr
Match: gi|778664114|ref|XP_011660224.1| (PREDICTED: probable WRKY transcription factor 2 [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31
Identity = 79/160 (49.38%), Postives = 105/160 (65.62%), Query Frame = 1 

Query: 25  DDDVLVDVNGGSLADRRASKRGRNGFNIAMARCPLGSSMVRSPFLTIPSGFSPTVLLDSP 84
           DD VLVD N GS A  R SKR RNG+   +      S ++ SP LTIP G +PT+LLDSP
Sbjct: 9   DDGVLVDANAGSFAQSRPSKRRRNGW---IPTKDSHSPILSSPSLTIPPGINPTLLLDSP 68

Query: 85  IMLLNTHDIPSPTTGTF-PIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGEL---- 144
           +MLLNT D+PSPTTGTF PIH IKDE SLLNP+M EDG S+GSEDS++RF P+GEL    
Sbjct: 69  VMLLNTQDLPSPTTGTFPPIHQIKDEQSLLNPVMPEDGISHGSEDSFFRFAPQGELCTLQ 128

Query: 145 ----------RLGNQVIDANISFIRYNFVECVNEKALLLE 170
                      + +Q +++  + + + FV  + ++A +L+
Sbjct: 129 SLLRIENQEAEIDHQALESEKTLMDFEFVPDIPKEAAVLK 165

[Close]
BLAST of Cp4.1LG00g01530 vs. NCBI nr
Match: gi|659085959|ref|XP_008443698.1| (PREDICTED: probable WRKY transcription factor 20 isoform X2 [Cucumis melo])

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-30
Identity = 80/160 (50.00%), Postives = 103/160 (64.38%), Query Frame = 1 

Query: 25  DDDVLVDVNGGSLADRRASKRGRNGFNIAMARCPLGSSMVRSPFLTIPSGFSPTVLLDSP 84
           DD VLVD N GS A  R SKR RNG+   +      S ++ SP LTIP G +PT+LLDSP
Sbjct: 9   DDGVLVDANAGSFATPRPSKRRRNGW---IPTKDSRSPILSSPSLTIPPGINPTLLLDSP 68

Query: 85  IMLLNTHDIPSPTTGTF-PIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGEL---- 144
           +MLLNT D+PSPTTGTF PIH IKDE SLLNP+M EDG S+G EDSY RF P+GEL    
Sbjct: 69  VMLLNTQDLPSPTTGTFPPIHQIKDEQSLLNPVMPEDGISHGCEDSYLRFAPQGELCTLQ 128

Query: 145 ----------RLGNQVIDANISFIRYNFVECVNEKALLLE 170
                      + +Q +++  + + + FV  V ++A +L+
Sbjct: 129 GLLRLENREAEIDHQALESEKTLMDFEFVPDVPKEASVLK 165

[Close]
BLAST of Cp4.1LG00g01530 vs. NCBI nr
Match: gi|659085953|ref|XP_008443695.1| (PREDICTED: probable WRKY transcription factor 34 isoform X1 [Cucumis melo])

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-30
Identity = 80/160 (50.00%), Postives = 103/160 (64.38%), Query Frame = 1 

Query: 25  DDDVLVDVNGGSLADRRASKRGRNGFNIAMARCPLGSSMVRSPFLTIPSGFSPTVLLDSP 84
           DD VLVD N GS A  R SKR RNG+   +      S ++ SP LTIP G +PT+LLDSP
Sbjct: 9   DDGVLVDANAGSFATPRPSKRRRNGW---IPTKDSRSPILSSPSLTIPPGINPTLLLDSP 68

Query: 85  IMLLNTHDIPSPTTGTF-PIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGEL---- 144
           +MLLNT D+PSPTTGTF PIH IKDE SLLNP+M EDG S+G EDSY RF P+GEL    
Sbjct: 69  VMLLNTQDLPSPTTGTFPPIHQIKDEQSLLNPVMPEDGISHGCEDSYLRFAPQGELCTLQ 128

Query: 145 ----------RLGNQVIDANISFIRYNFVECVNEKALLLE 170
                      + +Q +++  + + + FV  V ++A +L+
Sbjct: 129 GLLRLENREAEIDHQALESEKTLMDFEFVPDVPKEASVLK 165

[Close]
BLAST of Cp4.1LG00g01530 vs. NCBI nr
Match: gi|1009118274|ref|XP_015875770.1| (PREDICTED: WRKY transcription factor SUSIBA2-like [Ziziphus jujuba])

HSP 1 Score: 100.1 bits (248), Expect = 3.8e-18
Identity = 56/111 (50.45%), Postives = 71/111 (63.96%), Query Frame = 1 

Query: 34  GGSLADRRASKRGRNGFNIAMAR----CPLGSSMVRSPFLTIPSGFSPTVLLDSPIMLLN 93
           G S+A+RRA+K G N   I+ AR     PL S   RSP LTIP G SPT LLDSPIML N
Sbjct: 38  GASIAERRAAKCGFNAERISTARFRTTSPLASPAARSPCLTIPPGISPTALLDSPIMLPN 97

Query: 94  THDIPSPTTGTFPIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGELR 141
           +  +PSPTTGTFP+ S   E+S+LN +  EDG     +   +RF P G+++
Sbjct: 98  SQALPSPTTGTFPLPSFYHESSILNSMTREDG-----DKGSFRFKPHGDVK 143

[Close]
BLAST of Cp4.1LG00g01530 vs. NCBI nr
Match: gi|703154945|ref|XP_010111075.1| (putative WRKY transcription factor 2 [Morus notabilis])

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14
Identity = 57/124 (45.97%), Postives = 71/124 (57.26%), Query Frame = 1 

Query: 36  SLADRRASKRGRNGFNIAMAR----CPLGSSMVRSPFLTIPSGFSPTVLLDSPIMLLNTH 95
           S+A+RRA+K G N   I+  R     PL S   RSP LTIP G SPT LLDSPIML NT 
Sbjct: 38  SIAERRAAKFGFNAVKISTPRFRTTSPLASPAARSPCLTIPEGISPTALLDSPIMLPNTQ 97

Query: 96  DIPSPTTGTFPIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGELR-------LGNQ 149
            +PSPTTG F + +   E+S+L+    E  +   + DS +RF P GE +        GNQ
Sbjct: 98  VLPSPTTGKFLLPTFSQESSILHSTTREYLNKGNAIDS-FRFKPYGENKSPPRCSSFGNQ 157

The following BLAST results are available for this feature:
BLAST of Cp4.1LG00g01530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WRK26_ARATH5.7e-0645.76Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=1 SV=... [more]
BLAST of Cp4.1LG00g01530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0L1_CUCSA1.2e-3149.38Uncharacterized protein OS=Cucumis sativus GN=Csa_1G657480 PE=4 SV=1[more]
W9S6X4_9ROSA1.4e-1445.97Putative WRKY transcription factor 2 OS=Morus notabilis GN=L484_015130 PE=4 SV=1[more]
M9TNR1_JATCU1.2e-1344.07Uncharacterized protein OS=Jatropha curcas GN=WRKY10 PE=4 SV=1[more]
B9I7F0_POPTR1.5e-1352.04Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s08380g PE=4 SV=2[more]
M5WG22_PRUPE7.5e-1347.17Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppb022557mg PE=4 S... [more]
BLAST of Cp4.1LG00g01530 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07100.13.2e-0745.76 WRKY DNA-binding protein 26[more]
AT5G56270.14.6e-0638.04 WRKY DNA-binding protein 2[more]
BLAST of Cp4.1LG00g01530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778664114|ref|XP_011660224.1|1.8e-3149.38PREDICTED: probable WRKY transcription factor 2 [Cucumis sativus][more]
gi|659085959|ref|XP_008443698.1|1.1e-3050.00PREDICTED: probable WRKY transcription factor 20 isoform X2 [Cucumis melo][more]
gi|659085953|ref|XP_008443695.1|1.1e-3050.00PREDICTED: probable WRKY transcription factor 34 isoform X1 [Cucumis melo][more]
gi|1009118274|ref|XP_015875770.1|3.8e-1850.45PREDICTED: WRKY transcription factor SUSIBA2-like [Ziziphus jujuba][more]
gi|703154945|ref|XP_010111075.1|2.0e-1445.97putative WRKY transcription factor 2 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG00g01530.1Cp4.1LG00g01530.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31221FAMILY NOT NAMEDcoord: 35..111
score: 6.1
NoneNo IPR availablePANTHERPTHR31221:SF35WRKY TRANSCRIPTION FACTOR 10-RELATEDcoord: 35..111
score: 6.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG00g01530CmoCh11G009600Cucurbita moschata (Rifu)cmocpeB079
Cp4.1LG00g01530Lsi06G006980Bottle gourd (USVL1VR-Ls)cpelsiB017
Cp4.1LG00g01530MELO3C010057.2Melon (DHL92) v3.6.1cpemedB008
Cp4.1LG00g01530CsaV3_1G044520Cucumber (Chinese Long) v3cpecucB0000
Cp4.1LG00g01530CsGy1G031240Cucumber (Gy14) v2cgybcpeB002
Cp4.1LG00g01530Carg22727Silver-seed gourdcarcpeB0756
Cp4.1LG00g01530Carg17795Silver-seed gourdcarcpeB1340
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG00g01530Cp4.1LG18g02530Cucurbita pepo (Zucchini)cpecpeB006
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG00g01530Wax gourdcpewgoB0018
Cp4.1LG00g01530Cucumber (Gy14) v1cgycpeB0927
Cp4.1LG00g01530Cucurbita maxima (Rimu)cmacpeB070
Cp4.1LG00g01530Cucurbita maxima (Rimu)cmacpeB103
Cp4.1LG00g01530Cucurbita moschata (Rifu)cmocpeB042
Cp4.1LG00g01530Wild cucumber (PI 183967)cpecpiB000
Cp4.1LG00g01530Cucumber (Chinese Long) v2cpecuB000
Cp4.1LG00g01530Watermelon (Charleston Gray)cpewcgB012
Cp4.1LG00g01530Watermelon (97103) v1cpewmB006
Cp4.1LG00g01530Melon (DHL92) v3.5.1cpemeB007