Cp4.1LG00g01530.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG00g01530.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Transcription factor
Location	Cp4.1LG00 : 3840837 .. 3842164 (+)
Sequence length	510

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATTAATATTTTACACGTACACTCATGAATGGTACCAAAGATGACTTCGACCCATCTGAATTTCTGATCTTTTGGTCAAACATAAATGTTTTTCTTCGTTGACTTTTTGATCGGGATTGAACGTTTTGTTAATTCAGTAACATATCGATGTACGAATTGGAAGCGTTAAGATTTGAATCGATAATATAATAAAGTTCGTAAAGAAGAAAGAAGAAAAAAGAAGAGAAGAAGAAGATCTTATGAATCTATTTTAAGAAAAGAAATTACACCTAACAGAATTTACGCTTATTTCTATCTTCCTTTCAAATTTATTTATTTGTTTGTTTGTAGTTTTTTCTTTTTCCATTTTGAACCAATTTTTTTTACCTTTTTTTACCTTTTTACTGTTTTATTTTCTTTGAATGTCATTGAAATTTGTTCTATCTTCCAGTTGAAAGGTATGATTTTTACTGCGACTGAAGCTGTAAAATTATGTTAAATTACCGTTTTTACTGTGTCATGAAATGAATGCAGTTCATGGAGGTCTATGGCGAGCACAGAGCCTCTAAATTTGGTGATGATGATGTTCTTGTGGATGTCAATGGTGGCAGCTTGGCTGATAGACGAGCTTCCAAGAGAGGGAGAAATGGGTTCAATATCGCTATGGCTCGGTGCCCGTTGGGTTCGTCGATGGTTCGATCTCCTTTCCTCACAATTCCTTCCGGGTTTAGCCCGACCGTGTTGCTTGATTCGCCGATTATGTTGCTCAATACCCATGTGAGATTTCTTCTTTCTTCTTGTTTTCTTGTGATTTGAACATCTGATCTTGAGGAATGATCAGATCTGGTGAACGAATGAGCTAATCGGGAATGTTTTGTTATTGAAATCGTATGGATCTCTTGTTGGGTTGTTTTAATTTTATGAAGAAATCTTAACCGTAGAGGTATTTGATCTCGTTCTAGATTGGGATGATGTTTGGAGGATGAATTCTTCGAACTAGCTAGGGTTAATAAGAGCTAACGTAAATGATAAAAGGTTTCGAAGAAATGGATTCGGTTGGTTTGTGAACTAATAGATTTGATTGGATTGGATCGGATGTTATGTCAGGACATTCCATCTCCAACAACGGGCACTTTTCCGATACATTCCATAAAGGATGAGAATTCGTTGTTGAATCCTATCATGCTTGAAGATGGGAGTAGCTATGGCAGTGAGGATTCGTACTACAGGTTCACGCCTCGTGGGGAGCTCCGGCTTGGAAATCAGGTAATTGATGCTAATATTTCTTTTATACGCTATAATTTTGTCGAATGTGTGAACGAGAAGGCATTGCTTCTCGAGTAA

mRNA sequence

ATGGGTATGATTTTTACTGCGACTGAAGCTTTCATGGAGGTCTATGGCGAGCACAGAGCCTCTAAATTTGGTGATGATGATGTTCTTGTGGATGTCAATGGTGGCAGCTTGGCTGATAGACGAGCTTCCAAGAGAGGGAGAAATGGGTTCAATATCGCTATGGCTCGGTGCCCGTTGGGTTCGTCGATGGTTCGATCTCCTTTCCTCACAATTCCTTCCGGGTTTAGCCCGACCGTGTTGCTTGATTCGCCGATTATGTTGCTCAATACCCATGACATTCCATCTCCAACAACGGGCACTTTTCCGATACATTCCATAAAGGATGAGAATTCGTTGTTGAATCCTATCATGCTTGAAGATGGGAGTAGCTATGGCAGTGAGGATTCGTACTACAGGTTCACGCCTCGTGGGGAGCTCCGGCTTGGAAATCAGGTAATTGATGCTAATATTTCTTTTATACGCTATAATTTTGTCGAATGTGTGAACGAGAAGGCATTGCTTCTCGAGTAA

Coding sequence (CDS)

ATGGGTATGATTTTTACTGCGACTGAAGCTTTCATGGAGGTCTATGGCGAGCACAGAGCCTCTAAATTTGGTGATGATGATGTTCTTGTGGATGTCAATGGTGGCAGCTTGGCTGATAGACGAGCTTCCAAGAGAGGGAGAAATGGGTTCAATATCGCTATGGCTCGGTGCCCGTTGGGTTCGTCGATGGTTCGATCTCCTTTCCTCACAATTCCTTCCGGGTTTAGCCCGACCGTGTTGCTTGATTCGCCGATTATGTTGCTCAATACCCATGACATTCCATCTCCAACAACGGGCACTTTTCCGATACATTCCATAAAGGATGAGAATTCGTTGTTGAATCCTATCATGCTTGAAGATGGGAGTAGCTATGGCAGTGAGGATTCGTACTACAGGTTCACGCCTCGTGGGGAGCTCCGGCTTGGAAATCAGGTAATTGATGCTAATATTTCTTTTATACGCTATAATTTTGTCGAATGTGTGAACGAGAAGGCATTGCTTCTCGAGTAA

Protein sequence

MGMIFTATEAFMEVYGEHRASKFGDDDVLVDVNGGSLADRRASKRGRNGFNIAMARCPLGSSMVRSPFLTIPSGFSPTVLLDSPIMLLNTHDIPSPTTGTFPIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGELRLGNQVIDANISFIRYNFVECVNEKALLLE

Homology

[Close]

BLAST of Cp4.1LG00g01530.1 vs. Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 5.7e-06
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 1


Query: 66  SPFLTIPSGFSPTVLLDSPIMLLNTHDIPSPTTGTFPIHSIK-DENSLL---NPIMLED 121
           SP+ T+P G +P   LDSP++  +++ +PSPTTGTFP  S+  + N LL   N I  ED
Sbjct: 26  SPYFTMPPGLTPADFLDSPLLFTSSNILPSPTTGTFPAQSLNYNNNGLLIDKNEIKYED 84

[Close]

BLAST of Cp4.1LG00g01530.1 vs. TrEMBL
Match: A0A0A0M0L1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G657480 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.2e-31
Identity = 79/160 (49.38%), Postives = 105/160 (65.62%), Query Frame = 1


Query: 25  DDDVLVDVNGGSLADRRASKRGRNGFNIAMARCPLGSSMVRSPFLTIPSGFSPTVLLDSP 84
           DD VLVD N GS A  R SKR RNG+   +      S ++ SP LTIP G +PT+LLDSP
Sbjct: 9   DDGVLVDANAGSFAQSRPSKRRRNGW---IPTKDSHSPILSSPSLTIPPGINPTLLLDSP 68

Query: 85  IMLLNTHDIPSPTTGTF-PIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGEL---- 144
           +MLLNT D+PSPTTGTF PIH IKDE SLLNP+M EDG S+GSEDS++RF P+GEL    
Sbjct: 69  VMLLNTQDLPSPTTGTFPPIHQIKDEQSLLNPVMPEDGISHGSEDSFFRFAPQGELCTLQ 128

Query: 145 ----------RLGNQVIDANISFIRYNFVECVNEKALLLE 170
                      + +Q +++  + + + FV  + ++A +L+
Sbjct: 129 SLLRIENQEAEIDHQALESEKTLMDFEFVPDIPKEAAVLK 165

[Close]

BLAST of Cp4.1LG00g01530.1 vs. TrEMBL
Match: W9S6X4_9ROSA (Putative WRKY transcription factor 2 OS=Morus notabilis GN=L484_015130 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-14
Identity = 57/124 (45.97%), Postives = 71/124 (57.26%), Query Frame = 1


Query: 36  SLADRRASKRGRNGFNIAMAR----CPLGSSMVRSPFLTIPSGFSPTVLLDSPIMLLNTH 95
           S+A+RRA+K G N   I+  R     PL S   RSP LTIP G SPT LLDSPIML NT 
Sbjct: 38  SIAERRAAKFGFNAVKISTPRFRTTSPLASPAARSPCLTIPEGISPTALLDSPIMLPNTQ 97

Query: 96  DIPSPTTGTFPIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGELR-------LGNQ 149
            +PSPTTG F + +   E+S+L+    E  +   + DS +RF P GE +        GNQ
Sbjct: 98  VLPSPTTGKFLLPTFSQESSILHSTTREYLNKGNAIDS-FRFKPYGENKSPPRCSSFGNQ 157

[Close]

BLAST of Cp4.1LG00g01530.1 vs. TrEMBL
Match: M9TNR1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=WRKY10 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-13
Identity = 52/118 (44.07%), Postives = 67/118 (56.78%), Query Frame = 1


Query: 26  DDVLVDVNGGSLADRRASKRGRNGFNIAMAR--------CPLGSSMVRSPFLTIPSGFSP 85
           DD       GS+A+RRA+K G     I  AR         P  +++VRSP +TIP G SP
Sbjct: 42  DDASGTAIRGSIAERRAAKCGFKAERINTARFRTTSPLNSPAATALVRSPCITIPPGISP 101

Query: 86  TVLLDSPIMLLNTHDIPSPTTGTFPIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTP 136
           T LLDSPIML N+   PSPTTGTFP+  +  E+ +LN +   DG   G +   +RF P
Sbjct: 102 TALLDSPIMLPNSQ--PSPTTGTFPLPLLNYESPMLNTVTSADGDE-GCDSGSFRFKP 156

[Close]

BLAST of Cp4.1LG00g01530.1 vs. TrEMBL
Match: B9I7F0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s08380g PE=4 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.5e-13
Identity = 51/98 (52.04%), Postives = 65/98 (66.33%), Query Frame = 1


Query: 34  GGSLADRRASKRG----RNGFNIAMARC--PLGSSMVRSPFLTIPSGFSPTVLLDSPIML 93
           G S+A+RRA+K G        N A  R   PL +S +RSPF+TIPSG SPT LLDSPIML
Sbjct: 34  GISIAERRAAKCGFKMKAERINTARFRTTSPL-TSPLRSPFITIPSGISPTALLDSPIML 93

Query: 94  LNTHDIPSPTTGTFPIHSIKDENSLLNPIMLEDGSSYG 126
            N+H  PSPTTGTFP+  +K E+   NPI ++  + +G
Sbjct: 94  SNSHVQPSPTTGTFPLSPLKYESESFNPIYVQRETIHG 130

[Close]

BLAST of Cp4.1LG00g01530.1 vs. TrEMBL
Match: M5WG22_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppb022557mg PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.5e-13
Identity = 50/106 (47.17%), Postives = 65/106 (61.32%), Query Frame = 1


Query: 36  SLADRRASKRGRNGFNIAMAR------CPLGSSMVRSPFLTIPSGFSPTVLLDSPIMLLN 95
           S+A+RRA+K G N   I  AR       P  ++  RSP LTIP G SPT LLDSP+ML N
Sbjct: 42  SIAERRAAKCGFNAERINTARFRTTSPLPSPAAAARSPCLTIPPGISPTALLDSPMMLPN 101

Query: 96  THDIPSPTTGTFPIHSIKDENSLLNPIMLED---GSSYGSEDSYYR 133
           +  +PSPTTGTFP+    D++S+L     ED   GS +GS  ++ R
Sbjct: 102 SQALPSPTTGTFPLLPPSDDSSVLKSGTHEDGHRGSDFGSSFTFKR 147

[Close]

BLAST of Cp4.1LG00g01530.1 vs. TAIR10
Match: AT5G07100.1 (AT5G07100.1 WRKY DNA-binding protein 26)

HSP 1 Score: 52.4 bits (124), Expect = 3.2e-07
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 1


Query: 66  SPFLTIPSGFSPTVLLDSPIMLLNTHDIPSPTTGTFPIHSIK-DENSLL---NPIMLED 121
           SP+ T+P G +P   LDSP++  +++ +PSPTTGTFP  S+  + N LL   N I  ED
Sbjct: 26  SPYFTMPPGLTPADFLDSPLLFTSSNILPSPTTGTFPAQSLNYNNNGLLIDKNEIKYED 84

[Close]

BLAST of Cp4.1LG00g01530.1 vs. TAIR10
Match: AT5G56270.1 (AT5G56270.1 WRKY DNA-binding protein 2)

HSP 1 Score: 48.5 bits (114), Expect = 4.6e-06
Identity = 35/92 (38.04%), Postives = 46/92 (50.00%), Query Frame = 1


Query: 17  EHRASKFGDDDVLVDVNGGSLADRRASKRGRNGFNIAMARCPLGS-----SMVRSPFLTI 76
           E  +S    D    +V  G L++R A++ G N   +        +     S +RSP LTI
Sbjct: 55  EDTSSNHNKDSSQSNVFRGGLSERIAARAGFNAPRLNTENIRTNTDFSIDSNLRSPCLTI 114

Query: 77  PS-GFSPTVLLDSPIMLLNTHDIPSPTTGTFP 103
            S G SP  LL+SP+ L N    PSPTTG FP
Sbjct: 115 SSPGLSPATLLESPVFLSNPLAQPSPTTGKFP 146

[Close]

BLAST of Cp4.1LG00g01530.1 vs. NCBI nr
Match: gi|778664114|ref|XP_011660224.1| (PREDICTED: probable WRKY transcription factor 2 [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31
Identity = 79/160 (49.38%), Postives = 105/160 (65.62%), Query Frame = 1


Query: 25  DDDVLVDVNGGSLADRRASKRGRNGFNIAMARCPLGSSMVRSPFLTIPSGFSPTVLLDSP 84
           DD VLVD N GS A  R SKR RNG+   +      S ++ SP LTIP G +PT+LLDSP
Sbjct: 9   DDGVLVDANAGSFAQSRPSKRRRNGW---IPTKDSHSPILSSPSLTIPPGINPTLLLDSP 68

Query: 85  IMLLNTHDIPSPTTGTF-PIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGEL---- 144
           +MLLNT D+PSPTTGTF PIH IKDE SLLNP+M EDG S+GSEDS++RF P+GEL    
Sbjct: 69  VMLLNTQDLPSPTTGTFPPIHQIKDEQSLLNPVMPEDGISHGSEDSFFRFAPQGELCTLQ 128

Query: 145 ----------RLGNQVIDANISFIRYNFVECVNEKALLLE 170
                      + +Q +++  + + + FV  + ++A +L+
Sbjct: 129 SLLRIENQEAEIDHQALESEKTLMDFEFVPDIPKEAAVLK 165

[Close]

BLAST of Cp4.1LG00g01530.1 vs. NCBI nr
Match: gi|659085959|ref|XP_008443698.1| (PREDICTED: probable WRKY transcription factor 20 isoform X2 [Cucumis melo])

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-30
Identity = 80/160 (50.00%), Postives = 103/160 (64.38%), Query Frame = 1


Query: 25  DDDVLVDVNGGSLADRRASKRGRNGFNIAMARCPLGSSMVRSPFLTIPSGFSPTVLLDSP 84
           DD VLVD N GS A  R SKR RNG+   +      S ++ SP LTIP G +PT+LLDSP
Sbjct: 9   DDGVLVDANAGSFATPRPSKRRRNGW---IPTKDSRSPILSSPSLTIPPGINPTLLLDSP 68

Query: 85  IMLLNTHDIPSPTTGTF-PIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGEL---- 144
           +MLLNT D+PSPTTGTF PIH IKDE SLLNP+M EDG S+G EDSY RF P+GEL    
Sbjct: 69  VMLLNTQDLPSPTTGTFPPIHQIKDEQSLLNPVMPEDGISHGCEDSYLRFAPQGELCTLQ 128

Query: 145 ----------RLGNQVIDANISFIRYNFVECVNEKALLLE 170
                      + +Q +++  + + + FV  V ++A +L+
Sbjct: 129 GLLRLENREAEIDHQALESEKTLMDFEFVPDVPKEASVLK 165

[Close]

BLAST of Cp4.1LG00g01530.1 vs. NCBI nr
Match: gi|659085953|ref|XP_008443695.1| (PREDICTED: probable WRKY transcription factor 34 isoform X1 [Cucumis melo])

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-30
Identity = 80/160 (50.00%), Postives = 103/160 (64.38%), Query Frame = 1


Query: 25  DDDVLVDVNGGSLADRRASKRGRNGFNIAMARCPLGSSMVRSPFLTIPSGFSPTVLLDSP 84
           DD VLVD N GS A  R SKR RNG+   +      S ++ SP LTIP G +PT+LLDSP
Sbjct: 9   DDGVLVDANAGSFATPRPSKRRRNGW---IPTKDSRSPILSSPSLTIPPGINPTLLLDSP 68

Query: 85  IMLLNTHDIPSPTTGTF-PIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGEL---- 144
           +MLLNT D+PSPTTGTF PIH IKDE SLLNP+M EDG S+G EDSY RF P+GEL    
Sbjct: 69  VMLLNTQDLPSPTTGTFPPIHQIKDEQSLLNPVMPEDGISHGCEDSYLRFAPQGELCTLQ 128

Query: 145 ----------RLGNQVIDANISFIRYNFVECVNEKALLLE 170
                      + +Q +++  + + + FV  V ++A +L+
Sbjct: 129 GLLRLENREAEIDHQALESEKTLMDFEFVPDVPKEASVLK 165

[Close]

BLAST of Cp4.1LG00g01530.1 vs. NCBI nr
Match: gi|1009118274|ref|XP_015875770.1| (PREDICTED: WRKY transcription factor SUSIBA2-like [Ziziphus jujuba])

HSP 1 Score: 100.1 bits (248), Expect = 3.8e-18
Identity = 56/111 (50.45%), Postives = 71/111 (63.96%), Query Frame = 1


Query: 34  GGSLADRRASKRGRNGFNIAMAR----CPLGSSMVRSPFLTIPSGFSPTVLLDSPIMLLN 93
           G S+A+RRA+K G N   I+ AR     PL S   RSP LTIP G SPT LLDSPIML N
Sbjct: 38  GASIAERRAAKCGFNAERISTARFRTTSPLASPAARSPCLTIPPGISPTALLDSPIMLPN 97

Query: 94  THDIPSPTTGTFPIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGELR 141
           +  +PSPTTGTFP+ S   E+S+LN +  EDG     +   +RF P G+++
Sbjct: 98  SQALPSPTTGTFPLPSFYHESSILNSMTREDG-----DKGSFRFKPHGDVK 143

[Close]

BLAST of Cp4.1LG00g01530.1 vs. NCBI nr
Match: gi|703154945|ref|XP_010111075.1| (putative WRKY transcription factor 2 [Morus notabilis])

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14
Identity = 57/124 (45.97%), Postives = 71/124 (57.26%), Query Frame = 1


Query: 36  SLADRRASKRGRNGFNIAMAR----CPLGSSMVRSPFLTIPSGFSPTVLLDSPIMLLNTH 95
           S+A+RRA+K G N   I+  R     PL S   RSP LTIP G SPT LLDSPIML NT 
Sbjct: 38  SIAERRAAKFGFNAVKISTPRFRTTSPLASPAARSPCLTIPEGISPTALLDSPIMLPNTQ 97

Query: 96  DIPSPTTGTFPIHSIKDENSLLNPIMLEDGSSYGSEDSYYRFTPRGELR-------LGNQ 149
            +PSPTTG F + +   E+S+L+    E  +   + DS +RF P GE +        GNQ
Sbjct: 98  VLPSPTTGKFLLPTFSQESSILHSTTREYLNKGNAIDS-FRFKPYGENKSPPRCSSFGNQ 157

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g01530.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WRK26_ARATH	5.7e-06	45.76	Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=1 SV=...	[more]

BLAST of Cp4.1LG00g01530.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0L1_CUCSA	1.2e-31	49.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G657480 PE=4 SV=1	[more]
W9S6X4_9ROSA	1.4e-14	45.97	Putative WRKY transcription factor 2 OS=Morus notabilis GN=L484_015130 PE=4 SV=1	[more]
M9TNR1_JATCU	1.2e-13	44.07	Uncharacterized protein OS=Jatropha curcas GN=WRKY10 PE=4 SV=1	[more]
B9I7F0_POPTR	1.5e-13	52.04	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s08380g PE=4 SV=2	[more]
M5WG22_PRUPE	7.5e-13	47.17	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppb022557mg PE=4 S...	[more]

BLAST of Cp4.1LG00g01530.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07100.1	3.2e-07	45.76	WRKY DNA-binding protein 26	[more]
AT5G56270.1	4.6e-06	38.04	WRKY DNA-binding protein 2	[more]

BLAST of Cp4.1LG00g01530.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778664114\|ref\|XP_011660224.1\|	1.8e-31	49.38	PREDICTED: probable WRKY transcription factor 2 [Cucumis sativus]	[more]
gi\|659085959\|ref\|XP_008443698.1\|	1.1e-30	50.00	PREDICTED: probable WRKY transcription factor 20 isoform X2 [Cucumis melo]	[more]
gi\|659085953\|ref\|XP_008443695.1\|	1.1e-30	50.00	PREDICTED: probable WRKY transcription factor 34 isoform X1 [Cucumis melo]	[more]
gi\|1009118274\|ref\|XP_015875770.1\|	3.8e-18	50.45	PREDICTED: WRKY transcription factor SUSIBA2-like [Ziziphus jujuba]	[more]
gi\|703154945\|ref\|XP_010111075.1\|	2.0e-14	45.97	putative WRKY transcription factor 2 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG00g01530	Cp4.1LG00g01530	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1_LG00_10g00300.1:cds:001	Cp4.1_LG00_10g00300.1:cds:001	CDS
Cp4.1_LG00_10g00300.1:cds:002	Cp4.1_LG00_10g00300.1:cds:002	CDS
Cp4.1_LG00_10g00300.1:cds:003	Cp4.1_LG00_10g00300.1:cds:003	CDS
Cp4.1_LG00_10g00300.1:cds:004	Cp4.1_LG00_10g00300.1:cds:004	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG00g01530.1	Cp4.1LG00g01530.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 35..111 score: 6.1
None	No IPR available	PANTHER	PTHR31221:SF35	WRKY TRANSCRIPTION FACTOR 10-RELATED	coord: 35..111 score: 6.1