Cp4.1LG00g00210 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG00g00210
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Calcium-binding EF-hand family protein
Location	Cp4.1LG00 : 316667 .. 317035 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGAAACAACCAAATCCCCCAATCGGAGTCCGGATTCGAAGATTGGCTGCCGGAGATGGCGTGCAAGCTCGGGGGAGAGGGGCTGATCGGAGAACTCTGCAACGGATTCAATCTGCTGATGGACCCTGAGAAGGGAGTGATCAATTTGGAGAGCTTGAAGAGGAATGCGGCGGCGCTAGGGCTGGGAGATCACTCCGACGAGGAGCTGAGAAGCATGTTGAGAGAAGGGGATTTCGACGGCGACGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCAGATTAAGTCCGGAGTTGATGGACGCCTCCCGCTTCTGCTTCCAACAAAGTCTCCGTCCAGACTTTCCCAATTTTTCTTGA

mRNA sequence

ATGGCCGGAAACAACCAAATCCCCCAATCGGAGTCCGGATTCGAAGATTGGCTGCCGGAGATGGCGTGCAAGCTCGGGGGAGAGGGGCTGATCGGAGAACTCTGCAACGGATTCAATCTGCTGATGGACCCTGAGAAGGGAGTGATCAATTTGGAGAGCTTGAAGAGGAATGCGGCGGCGCTAGGGCTGGGAGATCACTCCGACGAGGAGCTGAGAAGCATGTTGAGAGAAGGGGATTTCGACGGCGACGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCAGATTAAGTCCGGAGTTGATGGACGCCTCCCGCTTCTGCTTCCAACAAAGTCTCCGTCCAGACTTTCCCAATTTTTCTTGA

Coding sequence (CDS)

ATGGCCGGAAACAACCAAATCCCCCAATCGGAGTCCGGATTCGAAGATTGGCTGCCGGAGATGGCGTGCAAGCTCGGGGGAGAGGGGCTGATCGGAGAACTCTGCAACGGATTCAATCTGCTGATGGACCCTGAGAAGGGAGTGATCAATTTGGAGAGCTTGAAGAGGAATGCGGCGGCGCTAGGGCTGGGAGATCACTCCGACGAGGAGCTGAGAAGCATGTTGAGAGAAGGGGATTTCGACGGCGACGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCAGATTAAGTCCGGAGTTGATGGACGCCTCCCGCTTCTGCTTCCAACAAAGTCTCCGTCCAGACTTTCCCAATTTTTCTTGA

Protein sequence

MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDHSDEELRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDFPNFS

Homology

[Close]

BLAST of Cp4.1LG00g00210 vs. Swiss-Prot
Match: PBP1_ARATH (Calcium-binding protein PBP1 OS=Arabidopsis thaliana GN=PBP1 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.4e-33
Identity = 73/115 (63.48%), Postives = 88/115 (76.52%), Query Frame = 1


Query: 5   NQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA-LGL 64
           NQ PQ    F+D+ P MA KLGGEGLI E+C GF LLMD +KGVI  ESL+RNA+  LGL
Sbjct: 14  NQEPQ----FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGL 73

Query: 65  GDHSDEELRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDF 119
           GD +D+++R M+ EGDFD DGALNQMEFCVLMFRLSPELM+ASR    + +  +F
Sbjct: 74  GDLTDDDVRYMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]

BLAST of Cp4.1LG00g00210 vs. Swiss-Prot
Match: KIC_ARATH (Calcium-binding protein KIC OS=Arabidopsis thaliana GN=KIC PE=1 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 3.0e-25
Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 1


Query: 11  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDHSDEE 70
           E+ +ED LP MA K+  E  + ELC GF+LL DPE+ +I  ESL+RN+  LG+   S E+
Sbjct: 19  ETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKED 78

Query: 71  LRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDFPN 121
            + M+REGD DGDGALNQ EFCVLM RLSPE+M+ +    +++L  +  N
Sbjct: 79  AQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQELCN 128

[Close]

BLAST of Cp4.1LG00g00210 vs. Swiss-Prot
Match: CATR_SCHDU (Caltractin OS=Scherffelia dubia PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 8.9e-09
Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 1


Query: 14  FEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDHSDEELRS 73
           FE++L  M  K+G      E+   F L  D E G I+ ++LKR A  LG  + +DEEL+ 
Sbjct: 82  FEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELG-ENMTDEELQE 141

Query: 74  MLREGDFDGDGALNQMEFCVLMFRLS 100
           M+ E D DGDG +N+ EF  +M + S
Sbjct: 142 MIDEADRDGDGEVNEEEFFRIMKKTS 166

[Close]

BLAST of Cp4.1LG00g00210 vs. Swiss-Prot
Match: CATR_TETST (Caltractin (Fragment) OS=Tetraselmis striata PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 8.9e-09
Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 1


Query: 14  FEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDHSDEELRS 73
           FE++L  M  K+G      E+   F L  D E G I+ ++LKR A  LG  + +DEEL+ 
Sbjct: 62  FEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELG-ENMTDEELQE 121

Query: 74  MLREGDFDGDGALNQMEFCVLMFRLS 100
           M+ E D DGDG +N+ EF  +M + S
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIMKKTS 146

[Close]

BLAST of Cp4.1LG00g00210 vs. Swiss-Prot
Match: CETN2_BOVIN (Centrin-2 OS=Bos taurus GN=CETN2 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.0e-08
Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 1


Query: 14  FEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDHSDEELRS 73
           F D+L  M  K+  +    E+   F L  D E G I+ ++LKR A  LG  + SDEEL+ 
Sbjct: 86  FSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLSDEELQE 145

Query: 74  MLREGDFDGDGALNQMEFCVLMFRLS 100
           M+ E D DGDG +N+ EF  +M + S
Sbjct: 146 MIDEADRDGDGEVNEQEFLRIMKKTS 170

[Close]

BLAST of Cp4.1LG00g00210 vs. TrEMBL
Match: A0A0A0L2H0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G081900 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-50
Identity = 100/118 (84.75%), Postives = 106/118 (89.83%), Query Frame = 1


Query: 1   MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA 60
           M   NQIPQSESGF+DWLP MA  LGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAA
Sbjct: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60

Query: 61  LGLGDHSDEELRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDF 119
           LGLGD SD+ELR MLREGDFDGDGALNQMEFCVLMFRLSPELM+ASR+CF +SLR +F
Sbjct: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 118

[Close]

BLAST of Cp4.1LG00g00210 vs. TrEMBL
Match: A0A0A0L347_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099590 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.8e-43
Identity = 88/111 (79.28%), Postives = 99/111 (89.19%), Query Frame = 1


Query: 11  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDHSDEE 70
           +SGFEDWLP MA +LGGEGLIGELCNGFNLLM+ EKGVI+ ESLKRNAAALGLGD SDE+
Sbjct: 7   KSGFEDWLPTMAERLGGEGLIGELCNGFNLLMNREKGVIDFESLKRNAAALGLGDLSDED 66

Query: 71  LRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDFPNF 122
           LRSMLREGDFDGDGALNQMEFCVLMFRLSPELM+ S F  +++L  +F +F
Sbjct: 67  LRSMLREGDFDGDGALNQMEFCVLMFRLSPELMEESWFLLEEALHQEFKDF 117

[Close]

BLAST of Cp4.1LG00g00210 vs. TrEMBL
Match: A0A0D2VEP2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G165400 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.4e-39
Identity = 81/110 (73.64%), Postives = 96/110 (87.27%), Query Frame = 1


Query: 12  SGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDHSDEEL 71
           SGFED+LP MA KLGGEGLIGELCNGFNLLMD EKGVI  +SLK+N+A LGL D SD++L
Sbjct: 14  SGFEDFLPIMANKLGGEGLIGELCNGFNLLMDSEKGVITFDSLKKNSALLGLQDLSDDDL 73

Query: 72  RSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDFPNF 122
           R M++EGDFDGDGALNQM+FCVLMFRLSPELM+AS F  +++L+ DF +F
Sbjct: 74  RCMVKEGDFDGDGALNQMDFCVLMFRLSPELMEASGFFLEEALQHDFKDF 123

[Close]

BLAST of Cp4.1LG00g00210 vs. TrEMBL
Match: A0A0D2NJQ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G078700 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.4e-39
Identity = 79/112 (70.54%), Postives = 97/112 (86.61%), Query Frame = 1


Query: 10  SESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDHSDE 69
           S SGF+D+LP MA KLGG+GLIGELCNGFNLLMD EKGVI  +SLK+N+A LGL D +D+
Sbjct: 13  SSSGFQDFLPVMADKLGGDGLIGELCNGFNLLMDREKGVITFDSLKKNSALLGLQDLTDD 72

Query: 70  ELRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDFPNF 122
           +L+ M+ EGDFDGDGALNQMEFCVLMFRLSPELM+ASRF F+++ + +F +F
Sbjct: 73  DLKCMMEEGDFDGDGALNQMEFCVLMFRLSPELMEASRFLFEEAFQHEFKDF 124

[Close]

BLAST of Cp4.1LG00g00210 vs. TrEMBL
Match: A0A061F769_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_031234 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.5e-39
Identity = 78/112 (69.64%), Postives = 97/112 (86.61%), Query Frame = 1


Query: 10  SESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDHSDE 69
           S S F+D+LP MA KLGG+GLIGELCNGFNLLMD +KGVI  +SLK+N+A LGL + +D+
Sbjct: 13  SSSDFQDFLPVMANKLGGDGLIGELCNGFNLLMDSDKGVITFDSLKKNSALLGLQELTDD 72

Query: 70  ELRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDFPNF 122
           +LRSM++EGDFDGDGALNQMEFCVLMFRLSPELM+ASRF F+++   +F +F
Sbjct: 73  DLRSMMKEGDFDGDGALNQMEFCVLMFRLSPELMEASRFLFEEAFEQEFKDF 124

[Close]

BLAST of Cp4.1LG00g00210 vs. TAIR10
Match: AT4G27280.1 (AT4G27280.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 151.0 bits (380), Expect = 4.8e-37
Identity = 75/109 (68.81%), Postives = 88/109 (80.73%), Query Frame = 1


Query: 11  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA-LGLGDHSDE 70
           +  F D+LP MA  LGGEGLIGELCNGF LLMD EKGVI  ESL+RNAAA LGLGD +DE
Sbjct: 16  QPNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDE 75

Query: 71  ELRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDF 119
           ++R M++EGDFD DGALNQMEFCVLMFRLSP+LM+ASR    + +  +F
Sbjct: 76  DVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]

BLAST of Cp4.1LG00g00210 vs. TAIR10
Match: AT5G54490.1 (AT5G54490.1 pinoid-binding protein 1)

HSP 1 Score: 143.7 bits (361), Expect = 7.7e-35
Identity = 73/115 (63.48%), Postives = 88/115 (76.52%), Query Frame = 1


Query: 5   NQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA-LGL 64
           NQ PQ    F+D+ P MA KLGGEGLI E+C GF LLMD +KGVI  ESL+RNA+  LGL
Sbjct: 14  NQEPQ----FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGL 73

Query: 65  GDHSDEELRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDF 119
           GD +D+++R M+ EGDFD DGALNQMEFCVLMFRLSPELM+ASR    + +  +F
Sbjct: 74  GDLTDDDVRYMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]

BLAST of Cp4.1LG00g00210 vs. TAIR10
Match: AT2G46600.1 (AT2G46600.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 115.9 bits (289), Expect = 1.7e-26
Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 1


Query: 11  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDHSDEE 70
           E+ +ED LP MA K+  E  + ELC GF+LL DPE+ +I  ESL+RN+  LG+   S E+
Sbjct: 19  ETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKED 78

Query: 71  LRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDFPN 121
            + M+REGD DGDGALNQ EFCVLM RLSPE+M+ +    +++L  +  N
Sbjct: 79  AQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQELCN 128

[Close]

BLAST of Cp4.1LG00g00210 vs. TAIR10
Match: AT4G37010.2 (AT4G37010.2 centrin 2)

HSP 1 Score: 48.1 bits (113), Expect = 4.4e-06
Identity = 29/97 (29.90%), Postives = 49/97 (50.52%), Query Frame = 1


Query: 6   QIPQSESG---FEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALG 65
           ++ +++SG   F++++  M  K G    I EL   F ++     G I+   +K  A  LG
Sbjct: 74  EVDKNQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRDIKMIAKELG 133

Query: 66  LGDHSDEELRSMLREGDFDGDGALNQMEFCVLMFRLS 100
             + +D ++  M+ E D D DG +N  EF  +M R S
Sbjct: 134 -ENFTDNDIEEMIEEADRDKDGEVNLEEFMKMMKRTS 169

[Close]

BLAST of Cp4.1LG00g00210 vs. NCBI nr
Match: gi|449470409|ref|XP_004152909.1| (PREDICTED: calcium-binding protein PBP1 [Cucumis sativus])

HSP 1 Score: 207.2 bits (526), Expect = 1.6e-50
Identity = 100/118 (84.75%), Postives = 106/118 (89.83%), Query Frame = 1


Query: 1   MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA 60
           M   NQIPQSESGF+DWLP MA  LGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAA
Sbjct: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60

Query: 61  LGLGDHSDEELRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDF 119
           LGLGD SD+ELR MLREGDFDGDGALNQMEFCVLMFRLSPELM+ASR+CF +SLR +F
Sbjct: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 118

[Close]

BLAST of Cp4.1LG00g00210 vs. NCBI nr
Match: gi|659126968|ref|XP_008463452.1| (PREDICTED: calcium-binding protein PBP1-like [Cucumis melo])

HSP 1 Score: 206.1 bits (523), Expect = 3.6e-50
Identity = 99/118 (83.90%), Postives = 106/118 (89.83%), Query Frame = 1


Query: 1   MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA 60
           M  NN IPQSESGF+DWLP MA KLGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAA
Sbjct: 1   MTSNNHIPQSESGFQDWLPVMAGKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60

Query: 61  LGLGDHSDEELRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDF 119
           LGLGD SD+ELR MLREGD +GDGALNQMEFCVLMFRLSPELM+ASR+CF +SLR +F
Sbjct: 61  LGLGDLSDDELRGMLREGDLNGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 118

[Close]

BLAST of Cp4.1LG00g00210 vs. NCBI nr
Match: gi|659102784|ref|XP_008452312.1| (PREDICTED: calcium-binding protein PBP1 [Cucumis melo])

HSP 1 Score: 183.3 bits (464), Expect = 2.5e-43
Identity = 89/111 (80.18%), Postives = 98/111 (88.29%), Query Frame = 1


Query: 11  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDHSDEE 70
           +SGFEDWLP MA +LGGEGLIGELCNGFNLLMD EKGVI+ ESLKRNAAALGL D SDE+
Sbjct: 7   KSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDED 66

Query: 71  LRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDFPNF 122
           LRSMLREGDFDGDGALNQMEFCVLMFRLSPELMD S F  +++L  +F +F
Sbjct: 67  LRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDF 117

[Close]

BLAST of Cp4.1LG00g00210 vs. NCBI nr
Match: gi|449463164|ref|XP_004149304.1| (PREDICTED: calcium-binding protein PBP1 [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 5.5e-43
Identity = 88/111 (79.28%), Postives = 99/111 (89.19%), Query Frame = 1


Query: 11  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDHSDEE 70
           +SGFEDWLP MA +LGGEGLIGELCNGFNLLM+ EKGVI+ ESLKRNAAALGLGD SDE+
Sbjct: 7   KSGFEDWLPTMAERLGGEGLIGELCNGFNLLMNREKGVIDFESLKRNAAALGLGDLSDED 66

Query: 71  LRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDFPNF 122
           LRSMLREGDFDGDGALNQMEFCVLMFRLSPELM+ S F  +++L  +F +F
Sbjct: 67  LRSMLREGDFDGDGALNQMEFCVLMFRLSPELMEESWFLLEEALHQEFKDF 117

[Close]

BLAST of Cp4.1LG00g00210 vs. NCBI nr
Match: gi|823131730|ref|XP_012459273.1| (PREDICTED: calcium-binding protein PBP1 [Gossypium raimondii])

HSP 1 Score: 169.1 bits (427), Expect = 4.8e-39
Identity = 79/112 (70.54%), Postives = 97/112 (86.61%), Query Frame = 1


Query: 10  SESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDHSDE 69
           S SGF+D+LP MA KLGG+GLIGELCNGFNLLMD EKGVI  +SLK+N+A LGL D +D+
Sbjct: 13  SSSGFQDFLPVMADKLGGDGLIGELCNGFNLLMDREKGVITFDSLKKNSALLGLQDLTDD 72

Query: 70  ELRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRFCFQQSLRPDFPNF 122
           +L+ M+ EGDFDGDGALNQMEFCVLMFRLSPELM+ASRF F+++ + +F +F
Sbjct: 73  DLKCMMEEGDFDGDGALNQMEFCVLMFRLSPELMEASRFLFEEAFQHEFKDF 124

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g00210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PBP1_ARATH	1.4e-33	63.48	Calcium-binding protein PBP1 OS=Arabidopsis thaliana GN=PBP1 PE=1 SV=1	[more]
KIC_ARATH	3.0e-25	50.91	Calcium-binding protein KIC OS=Arabidopsis thaliana GN=KIC PE=1 SV=2	[more]
CATR_SCHDU	8.9e-09	40.70	Caltractin OS=Scherffelia dubia PE=1 SV=1	[more]
CATR_TETST	8.9e-09	40.70	Caltractin (Fragment) OS=Tetraselmis striata PE=2 SV=1	[more]
CETN2_BOVIN	2.0e-08	40.70	Centrin-2 OS=Bos taurus GN=CETN2 PE=2 SV=1	[more]

BLAST of Cp4.1LG00g00210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2H0_CUCSA	1.1e-50	84.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G081900 PE=4 SV=1	[more]
A0A0A0L347_CUCSA	3.8e-43	79.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099590 PE=4 SV=1	[more]
A0A0D2VEP2_GOSRA	3.4e-39	73.64	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G165400 PE=4 SV=1	[more]
A0A0D2NJQ7_GOSRA	3.4e-39	70.54	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G078700 PE=4 SV=1	[more]
A0A061F769_THECC	7.5e-39	69.64	Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_031234 PE=4 SV=...	[more]

BLAST of Cp4.1LG00g00210 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G27280.1	4.8e-37	68.81	Calcium-binding EF-hand family protein	[more]
AT5G54490.1	7.7e-35	63.48	pinoid-binding protein 1	[more]
AT2G46600.1	1.7e-26	50.91	Calcium-binding EF-hand family protein	[more]
AT4G37010.2	4.4e-06	29.90	centrin 2	[more]

BLAST of Cp4.1LG00g00210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449470409\|ref\|XP_004152909.1\|	1.6e-50	84.75	PREDICTED: calcium-binding protein PBP1 [Cucumis sativus]	[more]
gi\|659126968\|ref\|XP_008463452.1\|	3.6e-50	83.90	PREDICTED: calcium-binding protein PBP1-like [Cucumis melo]	[more]
gi\|659102784\|ref\|XP_008452312.1\|	2.5e-43	80.18	PREDICTED: calcium-binding protein PBP1 [Cucumis melo]	[more]
gi\|449463164\|ref\|XP_004149304.1\|	5.5e-43	79.28	PREDICTED: calcium-binding protein PBP1 [Cucumis sativus]	[more]
gi\|823131730\|ref\|XP_012459273.1\|	4.8e-39	70.54	PREDICTED: calcium-binding protein PBP1 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair
IPR002048	EF_hand_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g00210.1	Cp4.1LG00g00210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 45..97 score: 4.5
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 70..98 score: 0.
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 66..101 score: 10
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 15..98 score: 6.6
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 14..103 score: 4.23
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 79..91 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 14..120 score: 8.0
None	No IPR available	PANTHER	PTHR10891:SF585	SUBFAMILY NOT NAMED	coord: 14..120 score: 8.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG00g00210	Cucsa.059610	Cucumber (Gy14) v1	cgycpeB0076
Cp4.1LG00g00210	CmaCh16G008410	Cucurbita maxima (Rimu)	cmacpeB337
Cp4.1LG00g00210	CmoCh16G009210	Cucurbita moschata (Rifu)	cmocpeB301
Cp4.1LG00g00210	Cla005258	Watermelon (97103) v1	cpewmB002
Cp4.1LG00g00210	Csa3G081900	Cucumber (Chinese Long) v2	cpecuB009
Cp4.1LG00g00210	ClCG10G005840	Watermelon (Charleston Gray)	cpewcgB001
Cp4.1LG00g00210	CSPI03G05450	Wild cucumber (PI 183967)	cpecpiB007
Cp4.1LG00g00210	Lsi05G006380	Bottle gourd (USVL1VR-Ls)	cpelsiB014
Cp4.1LG00g00210	MELO3C025433.2	Melon (DHL92) v3.6.1	cpemedB013
Cp4.1LG00g00210	CsaV3_3G005500	Cucumber (Chinese Long) v3	cpecucB0011
Cp4.1LG00g00210	Bhi11G000534	Wax gourd	cpewgoB0000
Cp4.1LG00g00210	CsGy3G005570	Cucumber (Gy14) v2	cgybcpeB280
Cp4.1LG00g00210	Carg24830	Silver-seed gourd	carcpeB1109

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG00g00210	Cucurbita pepo (Zucchini)	cpecpeB007
Cp4.1LG00g00210	Cucurbita maxima (Rimu)	cmacpeB692
Cp4.1LG00g00210	Cucurbita moschata (Rifu)	cmocpeB644
Cp4.1LG00g00210	Melon (DHL92) v3.5.1	cpemeB014
Cp4.1LG00g00210	Melon (DHL92) v3.6.1	cpemedB015
Cp4.1LG00g00210	Silver-seed gourd	carcpeB0933