CmoCh16G009210 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G009210
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCalcium-binding EF-hand family protein
LocationCmo_Chr16 : 5605780 .. 5606148 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGGAAACAACCAAATCCCCCAATCGGAGTCGGGATTCGAAGACTGGCTGCCGGAGATGGCGTGCAAGCTCGGGGGAGAGGGGCTGATCGGAGAACTCTGCAACGGATTCAATCTGCTGATGGACCCTGAGAAGGGAGTGATCAATTTGGAGAGCTTGAAGAGGAATGCGGCGGCGCTAGGGCTGGGAGATCAGTCCGACGAGGAGCTGAGAGGCATGTTGAGAGAAGGGGATTTCGACGGCGACGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCAGATTAAGTCCGGAGTTGATGGACGCCTCCCGCTACTGCTTCCAACAAAGTCTCCGTCCAGACTTTCCCAATTTTAATTGA

mRNA sequence

ATGGCCGGAAACAACCAAATCCCCCAATCGGAGTCGGGATTCGAAGACTGGCTGCCGGAGATGGCGTGCAAGCTCGGGGGAGAGGGGCTGATCGGAGAACTCTGCAACGGATTCAATCTGCTGATGGACCCTGAGAAGGGAGTGATCAATTTGGAGAGCTTGAAGAGGAATGCGGCGGCGCTAGGGCTGGGAGATCAGTCCGACGAGGAGCTGAGAGGCATGTTGAGAGAAGGGGATTTCGACGGCGACGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCAGATTAAGTCCGGAGTTGATGGACGCCTCCCGCTACTGCTTCCAACAAAGTCTCCGTCCAGACTTTCCCAATTTTAATTGA

Coding sequence (CDS)

ATGGCCGGAAACAACCAAATCCCCCAATCGGAGTCGGGATTCGAAGACTGGCTGCCGGAGATGGCGTGCAAGCTCGGGGGAGAGGGGCTGATCGGAGAACTCTGCAACGGATTCAATCTGCTGATGGACCCTGAGAAGGGAGTGATCAATTTGGAGAGCTTGAAGAGGAATGCGGCGGCGCTAGGGCTGGGAGATCAGTCCGACGAGGAGCTGAGAGGCATGTTGAGAGAAGGGGATTTCGACGGCGACGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCAGATTAAGTCCGGAGTTGATGGACGCCTCCCGCTACTGCTTCCAACAAAGTCTCCGTCCAGACTTTCCCAATTTTAATTGA
Homology
[Close]
BLAST of CmoCh16G009210 vs. Swiss-Prot
Match: PBP1_ARATH (Calcium-binding protein PBP1 OS=Arabidopsis thaliana GN=PBP1 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-33
Identity = 73/115 (63.48%), Postives = 88/115 (76.52%), Query Frame = 1 

Query: 5   NQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA-LGL 64
           NQ PQ    F+D+ P MA KLGGEGLI E+C GF LLMD +KGVI  ESL+RNA+  LGL
Sbjct: 14  NQEPQ----FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGL 73

Query: 65  GDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDF 119
           GD +D+++R M+ EGDFD DGALNQMEFCVLMFRLSPELM+ASR    + +  +F
Sbjct: 74  GDLTDDDVRYMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]
BLAST of CmoCh16G009210 vs. Swiss-Prot
Match: KIC_ARATH (Calcium-binding protein KIC OS=Arabidopsis thaliana GN=KIC PE=1 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 9.4e-27
Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 1 

Query: 11  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEE 70
           E+ +ED LP MA K+  E  + ELC GF+LL DPE+ +I  ESL+RN+  LG+   S E+
Sbjct: 19  ETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKED 78

Query: 71  LRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDFPNFN 123
            +GM+REGD DGDGALNQ EFCVLM RLSPE+M+ +    +++L  +  N N
Sbjct: 79  AQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQELCNHN 130

[Close]
BLAST of CmoCh16G009210 vs. Swiss-Prot
Match: CATR_SCHDU (Caltractin OS=Scherffelia dubia PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-08
Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 1 

Query: 14  FEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRG 73
           FE++L  M  K+G      E+   F L  D E G I+ ++LKR A  LG  + +DEEL+ 
Sbjct: 82  FEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELG-ENMTDEELQE 141

Query: 74  MLREGDFDGDGALNQMEFCVLMFRLS 100
           M+ E D DGDG +N+ EF  +M + S
Sbjct: 142 MIDEADRDGDGEVNEEEFFRIMKKTS 166

[Close]
BLAST of CmoCh16G009210 vs. Swiss-Prot
Match: CATR_TETST (Caltractin (Fragment) OS=Tetraselmis striata PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-08
Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 1 

Query: 14  FEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRG 73
           FE++L  M  K+G      E+   F L  D E G I+ ++LKR A  LG  + +DEEL+ 
Sbjct: 62  FEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELG-ENMTDEELQE 121

Query: 74  MLREGDFDGDGALNQMEFCVLMFRLS 100
           M+ E D DGDG +N+ EF  +M + S
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIMKKTS 146

[Close]
BLAST of CmoCh16G009210 vs. Swiss-Prot
Match: CETN2_BOVIN (Centrin-2 OS=Bos taurus GN=CETN2 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.4e-08
Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 1 

Query: 14  FEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRG 73
           F D+L  M  K+  +    E+   F L  D E G I+ ++LKR A  LG  + SDEEL+ 
Sbjct: 86  FSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLSDEELQE 145

Query: 74  MLREGDFDGDGALNQMEFCVLMFRLS 100
           M+ E D DGDG +N+ EF  +M + S
Sbjct: 146 MIDEADRDGDGEVNEQEFLRIMKKTS 170

[Close]
BLAST of CmoCh16G009210 vs. TrEMBL
Match: A0A0A0L2H0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G081900 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.5e-52
Identity = 102/118 (86.44%), Postives = 107/118 (90.68%), Query Frame = 1 

Query: 1   MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA 60
           M   NQIPQSESGF+DWLP MA  LGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAA
Sbjct: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60

Query: 61  LGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDF 119
           LGLGD SD+ELRGMLREGDFDGDGALNQMEFCVLMFRLSPELM+ASRYCF +SLR +F
Sbjct: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 118

[Close]
BLAST of CmoCh16G009210 vs. TrEMBL
Match: A0A0A0L347_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099590 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.9e-42
Identity = 86/111 (77.48%), Postives = 98/111 (88.29%), Query Frame = 1 

Query: 11  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEE 70
           +SGFEDWLP MA +LGGEGLIGELCNGFNLLM+ EKGVI+ ESLKRNAAALGLGD SDE+
Sbjct: 7   KSGFEDWLPTMAERLGGEGLIGELCNGFNLLMNREKGVIDFESLKRNAAALGLGDLSDED 66

Query: 71  LRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDFPNF 122
           LR MLREGDFDGDGALNQMEFCVLMFRLSPELM+ S +  +++L  +F +F
Sbjct: 67  LRSMLREGDFDGDGALNQMEFCVLMFRLSPELMEESWFLLEEALHQEFKDF 117

[Close]
BLAST of CmoCh16G009210 vs. TrEMBL
Match: A0A0D2NJQ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G078700 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.5e-39
Identity = 78/113 (69.03%), Postives = 98/113 (86.73%), Query Frame = 1 

Query: 10  SESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDE 69
           S SGF+D+LP MA KLGG+GLIGELCNGFNLLMD EKGVI  +SLK+N+A LGL D +D+
Sbjct: 13  SSSGFQDFLPVMADKLGGDGLIGELCNGFNLLMDREKGVITFDSLKKNSALLGLQDLTDD 72

Query: 70  ELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDFPNFN 123
           +L+ M+ EGDFDGDGALNQMEFCVLMFRLSPELM+ASR+ F+++ + +F +F+
Sbjct: 73  DLKCMMEEGDFDGDGALNQMEFCVLMFRLSPELMEASRFLFEEAFQHEFKDFH 125

[Close]
BLAST of CmoCh16G009210 vs. TrEMBL
Match: A0A0D2VEP2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G165400 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 9.8e-39
Identity = 80/110 (72.73%), Postives = 96/110 (87.27%), Query Frame = 1 

Query: 12  SGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEEL 71
           SGFED+LP MA KLGGEGLIGELCNGFNLLMD EKGVI  +SLK+N+A LGL D SD++L
Sbjct: 14  SGFEDFLPIMANKLGGEGLIGELCNGFNLLMDSEKGVITFDSLKKNSALLGLQDLSDDDL 73

Query: 72  RGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDFPNF 122
           R M++EGDFDGDGALNQM+FCVLMFRLSPELM+AS +  +++L+ DF +F
Sbjct: 74  RCMVKEGDFDGDGALNQMDFCVLMFRLSPELMEASGFFLEEALQHDFKDF 123

[Close]
BLAST of CmoCh16G009210 vs. TrEMBL
Match: A0A061F769_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_031234 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.8e-38
Identity = 76/113 (67.26%), Postives = 97/113 (85.84%), Query Frame = 1 

Query: 10  SESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDE 69
           S S F+D+LP MA KLGG+GLIGELCNGFNLLMD +KGVI  +SLK+N+A LGL + +D+
Sbjct: 13  SSSDFQDFLPVMANKLGGDGLIGELCNGFNLLMDSDKGVITFDSLKKNSALLGLQELTDD 72

Query: 70  ELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDFPNFN 123
           +LR M++EGDFDGDGALNQMEFCVLMFRLSPELM+ASR+ F+++   +F +F+
Sbjct: 73  DLRSMMKEGDFDGDGALNQMEFCVLMFRLSPELMEASRFLFEEAFEQEFKDFH 125

[Close]
BLAST of CmoCh16G009210 vs. TAIR10
Match: AT4G27280.1 (AT4G27280.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 150.6 bits (379), Expect = 6.3e-37
Identity = 75/109 (68.81%), Postives = 88/109 (80.73%), Query Frame = 1 

Query: 11  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA-LGLGDQSDE 70
           +  F D+LP MA  LGGEGLIGELCNGF LLMD EKGVI  ESL+RNAAA LGLGD +DE
Sbjct: 16  QPNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDE 75

Query: 71  ELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDF 119
           ++R M++EGDFD DGALNQMEFCVLMFRLSP+LM+ASR    + +  +F
Sbjct: 76  DVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]
BLAST of CmoCh16G009210 vs. TAIR10
Match: AT5G54490.1 (AT5G54490.1 pinoid-binding protein 1)

HSP 1 Score: 144.1 bits (362), Expect = 5.9e-35
Identity = 73/115 (63.48%), Postives = 88/115 (76.52%), Query Frame = 1 

Query: 5   NQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA-LGL 64
           NQ PQ    F+D+ P MA KLGGEGLI E+C GF LLMD +KGVI  ESL+RNA+  LGL
Sbjct: 14  NQEPQ----FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGL 73

Query: 65  GDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDF 119
           GD +D+++R M+ EGDFD DGALNQMEFCVLMFRLSPELM+ASR    + +  +F
Sbjct: 74  GDLTDDDVRYMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]
BLAST of CmoCh16G009210 vs. TAIR10
Match: AT2G46600.1 (AT2G46600.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 120.9 bits (302), Expect = 5.3e-28
Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 1 

Query: 11  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEE 70
           E+ +ED LP MA K+  E  + ELC GF+LL DPE+ +I  ESL+RN+  LG+   S E+
Sbjct: 19  ETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKED 78

Query: 71  LRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDFPNFN 123
            +GM+REGD DGDGALNQ EFCVLM RLSPE+M+ +    +++L  +  N N
Sbjct: 79  AQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQELCNHN 130

[Close]
BLAST of CmoCh16G009210 vs. NCBI nr
Match: gi|449470409|ref|XP_004152909.1| (PREDICTED: calcium-binding protein PBP1 [Cucumis sativus])

HSP 1 Score: 211.8 bits (538), Expect = 6.5e-52
Identity = 102/118 (86.44%), Postives = 107/118 (90.68%), Query Frame = 1 

Query: 1   MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA 60
           M   NQIPQSESGF+DWLP MA  LGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAA
Sbjct: 1   MTPKNQIPQSESGFQDWLPVMAGNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60

Query: 61  LGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDF 119
           LGLGD SD+ELRGMLREGDFDGDGALNQMEFCVLMFRLSPELM+ASRYCF +SLR +F
Sbjct: 61  LGLGDLSDDELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 118

[Close]
BLAST of CmoCh16G009210 vs. NCBI nr
Match: gi|659126968|ref|XP_008463452.1| (PREDICTED: calcium-binding protein PBP1-like [Cucumis melo])

HSP 1 Score: 210.7 bits (535), Expect = 1.4e-51
Identity = 101/118 (85.59%), Postives = 107/118 (90.68%), Query Frame = 1 

Query: 1   MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAA 60
           M  NN IPQSESGF+DWLP MA KLGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAA
Sbjct: 1   MTSNNHIPQSESGFQDWLPVMAGKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA 60

Query: 61  LGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDF 119
           LGLGD SD+ELRGMLREGD +GDGALNQMEFCVLMFRLSPELM+ASRYCF +SLR +F
Sbjct: 61  LGLGDLSDDELRGMLREGDLNGDGALNQMEFCVLMFRLSPELMEASRYCFHESLRREF 118

[Close]
BLAST of CmoCh16G009210 vs. NCBI nr
Match: gi|659102784|ref|XP_008452312.1| (PREDICTED: calcium-binding protein PBP1 [Cucumis melo])

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-42
Identity = 87/111 (78.38%), Postives = 97/111 (87.39%), Query Frame = 1 

Query: 11  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEE 70
           +SGFEDWLP MA +LGGEGLIGELCNGFNLLMD EKGVI+ ESLKRNAAALGL D SDE+
Sbjct: 7   KSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDED 66

Query: 71  LRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDFPNF 122
           LR MLREGDFDGDGALNQMEFCVLMFRLSPELMD S +  +++L  +F +F
Sbjct: 67  LRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDF 117

[Close]
BLAST of CmoCh16G009210 vs. NCBI nr
Match: gi|449463164|ref|XP_004149304.1| (PREDICTED: calcium-binding protein PBP1 [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 2.7e-42
Identity = 86/111 (77.48%), Postives = 98/111 (88.29%), Query Frame = 1 

Query: 11  ESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEE 70
           +SGFEDWLP MA +LGGEGLIGELCNGFNLLM+ EKGVI+ ESLKRNAAALGLGD SDE+
Sbjct: 7   KSGFEDWLPTMAERLGGEGLIGELCNGFNLLMNREKGVIDFESLKRNAAALGLGDLSDED 66

Query: 71  LRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDFPNF 122
           LR MLREGDFDGDGALNQMEFCVLMFRLSPELM+ S +  +++L  +F +F
Sbjct: 67  LRSMLREGDFDGDGALNQMEFCVLMFRLSPELMEESWFLLEEALHQEFKDF 117

[Close]
BLAST of CmoCh16G009210 vs. NCBI nr
Match: gi|823131730|ref|XP_012459273.1| (PREDICTED: calcium-binding protein PBP1 [Gossypium raimondii])

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-38
Identity = 78/113 (69.03%), Postives = 98/113 (86.73%), Query Frame = 1 

Query: 10  SESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDE 69
           S SGF+D+LP MA KLGG+GLIGELCNGFNLLMD EKGVI  +SLK+N+A LGL D +D+
Sbjct: 13  SSSGFQDFLPVMADKLGGDGLIGELCNGFNLLMDREKGVITFDSLKKNSALLGLQDLTDD 72

Query: 70  ELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDFPNFN 123
           +L+ M+ EGDFDGDGALNQMEFCVLMFRLSPELM+ASR+ F+++ + +F +F+
Sbjct: 73  DLKCMMEEGDFDGDGALNQMEFCVLMFRLSPELMEASRFLFEEAFQHEFKDFH 125

The following BLAST results are available for this feature:
BLAST of CmoCh16G009210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PBP1_ARATH1.0e-3363.48Calcium-binding protein PBP1 OS=Arabidopsis thaliana GN=PBP1 PE=1 SV=1[more]
KIC_ARATH9.4e-2751.79Calcium-binding protein KIC OS=Arabidopsis thaliana GN=KIC PE=1 SV=2[more]
CATR_SCHDU1.2e-0840.70Caltractin OS=Scherffelia dubia PE=1 SV=1[more]
CATR_TETST1.2e-0840.70Caltractin (Fragment) OS=Tetraselmis striata PE=2 SV=1[more]
CETN2_BOVIN3.4e-0840.70Centrin-2 OS=Bos taurus GN=CETN2 PE=2 SV=1[more]
BLAST of CmoCh16G009210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2H0_CUCSA4.5e-5286.44Uncharacterized protein OS=Cucumis sativus GN=Csa_3G081900 PE=4 SV=1[more]
A0A0A0L347_CUCSA1.9e-4277.48Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099590 PE=4 SV=1[more]
A0A0D2NJQ7_GOSRA7.5e-3969.03Uncharacterized protein OS=Gossypium raimondii GN=B456_002G078700 PE=4 SV=1[more]
A0A0D2VEP2_GOSRA9.8e-3972.73Uncharacterized protein OS=Gossypium raimondii GN=B456_013G165400 PE=4 SV=1[more]
A0A061F769_THECC2.8e-3867.26Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_031234 PE=4 SV=... [more]
BLAST of CmoCh16G009210 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27280.16.3e-3768.81 Calcium-binding EF-hand family protein[more]
AT5G54490.15.9e-3563.48 pinoid-binding protein 1[more]
AT2G46600.15.3e-2851.79 Calcium-binding EF-hand family protein[more]
BLAST of CmoCh16G009210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449470409|ref|XP_004152909.1|6.5e-5286.44PREDICTED: calcium-binding protein PBP1 [Cucumis sativus][more]
gi|659126968|ref|XP_008463452.1|1.4e-5185.59PREDICTED: calcium-binding protein PBP1-like [Cucumis melo][more]
gi|659102784|ref|XP_008452312.1|1.2e-4278.38PREDICTED: calcium-binding protein PBP1 [Cucumis melo][more]
gi|449463164|ref|XP_004149304.1|2.7e-4277.48PREDICTED: calcium-binding protein PBP1 [Cucumis sativus][more]
gi|823131730|ref|XP_012459273.1|1.1e-3869.03PREDICTED: calcium-binding protein PBP1 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G009210.1CmoCh16G009210.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 45..97
score: 1.7
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 66..101
score: 10
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 15..98
score: 1.
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 30..104
score: 1.27
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 79..91
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 14..120
score: 2.0
NoneNo IPR availablePANTHERPTHR10891:SF585SUBFAMILY NOT NAMEDcoord: 14..120
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh16G009210Cucsa.059610Cucumber (Gy14) v1cgycmoB0075
CmoCh16G009210CmaCh16G008410Cucurbita maxima (Rimu)cmacmoB324
CmoCh16G009210Cla005258Watermelon (97103) v1cmowmB289
CmoCh16G009210Csa3G081900Cucumber (Chinese Long) v2cmocuB309
CmoCh16G009210MELO3C025433Melon (DHL92) v3.5.1cmomeB283
CmoCh16G009210ClCG10G005840Watermelon (Charleston Gray)cmowcgB274
CmoCh16G009210CSPI03G05450Wild cucumber (PI 183967)cmocpiB317
CmoCh16G009210Lsi05G006380Bottle gourd (USVL1VR-Ls)cmolsiB301
CmoCh16G009210Cp4.1LG00g00210Cucurbita pepo (Zucchini)cmocpeB301
CmoCh16G009210Cp4.1LG14g00130Cucurbita pepo (Zucchini)cmocpeB308
CmoCh16G009210MELO3C025433.2Melon (DHL92) v3.6.1cmomedB322
CmoCh16G009210CsaV3_3G005500Cucumber (Chinese Long) v3cmocucB0372
CmoCh16G009210Cla97C10G190010Watermelon (97103) v2cmowmbB317
CmoCh16G009210Bhi11G000534Wax gourdcmowgoB0406
CmoCh16G009210CsGy3G005570Cucumber (Gy14) v2cgybcmoB303
CmoCh16G009210Carg24830Silver-seed gourdcarcmoB1069
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh16G009210Cucurbita moschata (Rifu)cmocmoB285
CmoCh16G009210Cucurbita moschata (Rifu)cmocmoB290
CmoCh16G009210Cucurbita maxima (Rimu)cmacmoB700
CmoCh16G009210Cucurbita maxima (Rimu)cmacmoB704
CmoCh16G009210Melon (DHL92) v3.5.1cmomeB293
CmoCh16G009210Cucurbita pepo (Zucchini)cmocpeB317
CmoCh16G009210Bottle gourd (USVL1VR-Ls)cmolsiB306
CmoCh16G009210Melon (DHL92) v3.6.1cmomedB325
CmoCh16G009210Silver-seed gourdcarcmoB0921
CmoCh16G009210Watermelon (97103) v2cmowmbB329
CmoCh16G009210Wax gourdcmowgoB0450