CmoCh20G011640 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G011640
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ralf-like 34, putative
Location	Cmo_Chr20 : 11471045 .. 11471428 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAAGCTCCTCTTCCCCTTCTTCACCATCCTCCTCCTCCTCCTCTCCGCCGCTTCCGCCCATCTCCCCGTCGACACCTCTCTCAAGCTCATGGCCGACGCCCTCGAATGGCCCACCACAATCTCCATTCCCGACCTCGACCACGACCACGACCACGACCACGACCACGACCACGACGACCTTCACCAAGACCCGCGCAGATCTCTCTTCTGGAGCCGAGTCCACTACTACATCTCCTACGGCGCTCTCGCCGCCAACCGGATCCCTTGCCCGCCTCGTTCCGGCCGCCCTTACTACACTCACAACTGCTACAAGGCCCGCGGCCCTGTCAATCCCTACAGCCGTGGATGCTCCGCCATCACCCGCTGCCGCCGCTGA

mRNA sequence

ATGGCTTCCAAGCTCCTCTTCCCCTTCTTCACCATCCTCCTCCTCCTCCTCTCCGCCGCTTCCGCCCATCTCCCCGTCGACACCTCTCTCAAGCTCATGGCCGACGCCCTCGAATGGCCCACCACAATCTCCATTCCCGACCTCGACCACGACCACGACCACGACCACGACCACGACCACGACGACCTTCACCAAGACCCGCGCAGATCTCTCTTCTGGAGCCGAGTCCACTACTACATCTCCTACGGCGCTCTCGCCGCCAACCGGATCCCTTGCCCGCCTCGTTCCGGCCGCCCTTACTACACTCACAACTGCTACAAGGCCCGCGGCCCTGTCAATCCCTACAGCCGTGGATGCTCCGCCATCACCCGCTGCCGCCGCTGA

Coding sequence (CDS)

ATGGCTTCCAAGCTCCTCTTCCCCTTCTTCACCATCCTCCTCCTCCTCCTCTCCGCCGCTTCCGCCCATCTCCCCGTCGACACCTCTCTCAAGCTCATGGCCGACGCCCTCGAATGGCCCACCACAATCTCCATTCCCGACCTCGACCACGACCACGACCACGACCACGACCACGACCACGACGACCTTCACCAAGACCCGCGCAGATCTCTCTTCTGGAGCCGAGTCCACTACTACATCTCCTACGGCGCTCTCGCCGCCAACCGGATCCCTTGCCCGCCTCGTTCCGGCCGCCCTTACTACACTCACAACTGCTACAAGGCCCGCGGCCCTGTCAATCCCTACAGCCGTGGATGCTCCGCCATCACCCGCTGCCGCCGCTGA

Homology

[Close]

BLAST of CmoCh20G011640 vs. Swiss-Prot
Match: RLF34_ARATH (Protein RALF-like 34 OS=Arabidopsis thaliana GN=RALFL34 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.9e-26
Identity = 62/122 (50.82%), Postives = 79/122 (64.75%), Query Frame = 1


Query: 6   LFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQ 65
           L    ++L  +    S  L  + SL L+ D  +WP + S      D +   +   +D   
Sbjct: 8   LLLILSLLTFISLQRSESLSDNPSLTLLPDGFDWPISHSDEFDIIDGEESFEVTEEDDGV 67

Query: 66  DPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRC 125
             RRSL+W R  YYISYGAL+ANR+PCPPRSGR YYTHNC++ARGPV+PYSRGCS+ITRC
Sbjct: 68  TDRRSLYWRRTKYYISYGALSANRVPCPPRSGRSYYTHNCFRARGPVHPYSRGCSSITRC 127

Query: 126 RR 128
           RR
Sbjct: 128 RR 129

[Close]

BLAST of CmoCh20G011640 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.5e-08
Identity = 32/49 (65.31%), Postives = 33/49 (67.35%), Query Frame = 1


Query: 79  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR 128
           YISYGAL  N IPC  R G  YY  NC +     NPYSRGCSAITRCRR
Sbjct: 93  YISYGALRRNTIPCS-RRGASYY--NCRRG-AQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmoCh20G011640 vs. Swiss-Prot
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.6e-08
Identity = 31/49 (63.27%), Postives = 33/49 (67.35%), Query Frame = 1


Query: 79  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR 128
           YISYGAL  N +PC  R G  YY  NC +     NPYSRGCSAITRCRR
Sbjct: 72  YISYGALRRNTVPCS-RRGASYY--NCRRG-AQANPYSRGCSAITRCRR 116

[Close]

BLAST of CmoCh20G011640 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-07
Identity = 31/48 (64.58%), Postives = 32/48 (66.67%), Query Frame = 1


Query: 79  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCR 127
           YISYGAL  N +PC  R G  YY  NC K     NPYSRGCSAITRCR
Sbjct: 71  YISYGALQKNSVPCS-RRGASYY--NC-KPGAQANPYSRGCSAITRCR 114

[Close]

BLAST of CmoCh20G011640 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.7e-07
Identity = 29/49 (59.18%), Postives = 32/49 (65.31%), Query Frame = 1


Query: 79  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR 128
           YISYGA+  N +PC  R G  YY  NC +     NPYSRGCS ITRCRR
Sbjct: 75  YISYGAMRRNSVPCS-RRGASYY--NCQRG-AQANPYSRGCSTITRCRR 119

[Close]

BLAST of CmoCh20G011640 vs. TrEMBL
Match: A0A0A0LMS2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292820 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-47
Identity = 102/128 (79.69%), Postives = 109/128 (85.16%), Query Frame = 1


Query: 1   MASK-LLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHD 60
           MASK LLFP FT+LLL LS++SAHL VDTSLKLMADALEWPTT S+     + D D D D
Sbjct: 1   MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDLD 60

Query: 61  HDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGC 120
              L QDPRRSLFW RVHYYISYGAL+ANRIPCPPRSGRPYYTHNCYKARGPVNPY+RGC
Sbjct: 61  ---LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGC 120

Query: 121 SAITRCRR 128
           SAITRCRR
Sbjct: 121 SAITRCRR 125

[Close]

BLAST of CmoCh20G011640 vs. TrEMBL
Match: A0A151TIM7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_013147 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 3.2e-32
Identity = 70/102 (68.63%), Postives = 83/102 (81.37%), Query Frame = 1


Query: 27  DTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQD-PRRSLFWSRVHYYISYGAL 86
           +T+L LM+DAL+WPTT+S+    +D D D D + +D+     RRSLFW R+ YYISYGAL
Sbjct: 3   ETTLNLMSDALDWPTTMSL----YDDDVDQDTEEEDVENGFSRRSLFWRRMKYYISYGAL 62

Query: 87  AANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR 128
           +ANRIPCPPRSGR YYTHNCYKARGPV+PYSRGCS ITRCRR
Sbjct: 63  SANRIPCPPRSGRSYYTHNCYKARGPVHPYSRGCSVITRCRR 100

[Close]

BLAST of CmoCh20G011640 vs. TrEMBL
Match: I1LHE0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G055200 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 9.2e-32
Identity = 76/120 (63.33%), Postives = 90/120 (75.00%), Query Frame = 1


Query: 13  LLLLLSAASAHLPV-----DTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDP 72
           LLL   A ++H+ V     DT+  LM+DALEWPTT+S+ D D     D   D ++ +   
Sbjct: 9   LLLFCIAFTSHVAVQAHMEDTAFNLMSDALEWPTTMSLYDED-----DAQEDVENAYS-- 68

Query: 73  RRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR 128
           RRSLFW R+ YYISYGAL+ANRIPCPPRSGR YYTHNCY+ARGPV+PYSRGCSAITRCRR
Sbjct: 69  RRSLFWRRMKYYISYGALSANRIPCPPRSGRSYYTHNCYRARGPVHPYSRGCSAITRCRR 121

[Close]

BLAST of CmoCh20G011640 vs. TrEMBL
Match: A0A0L9UR74_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g032500 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.7e-31
Identity = 69/101 (68.32%), Postives = 79/101 (78.22%), Query Frame = 1


Query: 27  DTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALA 86
           ++ L LM+DAL+WPTT+S+ D     D D D + D      RRSLFW R+ YYISYGAL+
Sbjct: 34  ESGLNLMSDALDWPTTMSLYD-----DLDEDEEEDVESGFSRRSLFWRRMKYYISYGALS 93

Query: 87  ANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR 128
           ANRIPCPPRSGR YYTHNCYKARGPV+PYSRGCS ITRCRR
Sbjct: 94  ANRIPCPPRSGRSYYTHNCYKARGPVHPYSRGCSVITRCRR 129

[Close]

BLAST of CmoCh20G011640 vs. TrEMBL
Match: A0A0S3T4L8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G179100 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.7e-31
Identity = 69/101 (68.32%), Postives = 79/101 (78.22%), Query Frame = 1


Query: 27  DTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALA 86
           ++ L LM+DAL+WPTT+S+ D     D D D + D      RRSLFW R+ YYISYGAL+
Sbjct: 34  ESGLNLMSDALDWPTTMSLYD-----DLDEDEEEDVESGFSRRSLFWRRMKYYISYGALS 93

Query: 87  ANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR 128
           ANRIPCPPRSGR YYTHNCYKARGPV+PYSRGCS ITRCRR
Sbjct: 94  ANRIPCPPRSGRSYYTHNCYKARGPVHPYSRGCSVITRCRR 129

[Close]

BLAST of CmoCh20G011640 vs. TAIR10
Match: AT5G67070.1 (AT5G67070.1 ralf-like 34)

HSP 1 Score: 118.6 bits (296), Expect = 2.7e-27
Identity = 62/122 (50.82%), Postives = 79/122 (64.75%), Query Frame = 1


Query: 6   LFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQ 65
           L    ++L  +    S  L  + SL L+ D  +WP + S      D +   +   +D   
Sbjct: 8   LLLILSLLTFISLQRSESLSDNPSLTLLPDGFDWPISHSDEFDIIDGEESFEVTEEDDGV 67

Query: 66  DPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRC 125
             RRSL+W R  YYISYGAL+ANR+PCPPRSGR YYTHNC++ARGPV+PYSRGCS+ITRC
Sbjct: 68  TDRRSLYWRRTKYYISYGALSANRVPCPPRSGRSYYTHNCFRARGPVHPYSRGCSSITRC 127

Query: 126 RR 128
           RR
Sbjct: 128 RR 129

[Close]

BLAST of CmoCh20G011640 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-09
Identity = 32/49 (65.31%), Postives = 33/49 (67.35%), Query Frame = 1


Query: 79  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR 128
           YISYGAL  N IPC  R G  YY  NC +     NPYSRGCSAITRCRR
Sbjct: 93  YISYGALRRNTIPCS-RRGASYY--NCRRG-AQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmoCh20G011640 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 58.9 bits (141), Expect = 2.6e-09
Identity = 31/49 (63.27%), Postives = 33/49 (67.35%), Query Frame = 1


Query: 79  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR 128
           YISYGAL  N +PC  R G  YY  NC +     NPYSRGCSAITRCRR
Sbjct: 72  YISYGALRRNTVPCS-RRGASYY--NCRRG-AQANPYSRGCSAITRCRR 116

[Close]

BLAST of CmoCh20G011640 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 57.0 bits (136), Expect = 9.8e-09
Identity = 29/49 (59.18%), Postives = 32/49 (65.31%), Query Frame = 1


Query: 79  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR 128
           YISYGA+  N +PC  R G  YY  NC +     NPYSRGCS ITRCRR
Sbjct: 75  YISYGAMRRNSVPCS-RRGASYY--NCQRG-AQANPYSRGCSTITRCRR 119

[Close]

BLAST of CmoCh20G011640 vs. TAIR10
Match: AT1G02900.1 (AT1G02900.1 rapid alkalinization factor 1)

HSP 1 Score: 48.5 bits (114), Expect = 3.5e-06
Identity = 26/48 (54.17%), Postives = 28/48 (58.33%), Query Frame = 1


Query: 79  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCR 127
           YISY +L  N +PC  R G  YY  NC       NPYSRGCS I RCR
Sbjct: 76  YISYQSLKRNSVPCS-RRGASYY--NCQNG-AQANPYSRGCSKIARCR 119

[Close]

BLAST of CmoCh20G011640 vs. NCBI nr
Match: gi|449460676|ref|XP_004148071.1| (PREDICTED: protein RALF-like 34 [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 2.3e-47
Identity = 102/128 (79.69%), Postives = 109/128 (85.16%), Query Frame = 1


Query: 1   MASK-LLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHD 60
           MASK LLFP FT+LLL LS++SAHL VDTSLKLMADALEWPTT S+     + D D D D
Sbjct: 1   MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDLD 60

Query: 61  HDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGC 120
              L QDPRRSLFW RVHYYISYGAL+ANRIPCPPRSGRPYYTHNCYKARGPVNPY+RGC
Sbjct: 61  ---LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGC 120

Query: 121 SAITRCRR 128
           SAITRCRR
Sbjct: 121 SAITRCRR 125

[Close]

BLAST of CmoCh20G011640 vs. NCBI nr
Match: gi|659116040|ref|XP_008457868.1| (PREDICTED: protein RALF-like 34 [Cucumis melo])

HSP 1 Score: 195.7 bits (496), Expect = 5.0e-47
Identity = 103/128 (80.47%), Postives = 108/128 (84.38%), Query Frame = 1


Query: 1   MASK-LLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHD 60
           MASK LLF  FT+LLL LS++SAHL VDTSLKLMADALEWPTT S+     D D D D D
Sbjct: 1   MASKSLLFLLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTDDDLDDDLD 60

Query: 61  HDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGC 120
              L QDPRRSLFW RVHYYISYGAL+ANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGC
Sbjct: 61  ---LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGC 120

Query: 121 SAITRCRR 128
           SAITRCRR
Sbjct: 121 SAITRCRR 125

[Close]

BLAST of CmoCh20G011640 vs. NCBI nr
Match: gi|1009144459|ref|XP_015889813.1| (PREDICTED: protein RALF-like 34 [Ziziphus jujuba])

HSP 1 Score: 146.4 bits (368), Expect = 3.5e-32
Identity = 80/119 (67.23%), Postives = 90/119 (75.63%), Query Frame = 1


Query: 10  FTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPD-LDHDHDHDHDHDHDDLHQDPR 69
           F ILL L S + A L  DTSLKLM+DALEWPTT+S  D LD   + + D D        R
Sbjct: 15  FVILLGLCSFSDAQLD-DTSLKLMSDALEWPTTMSFYDELDEGDEEEEDVDG----AFGR 74

Query: 70  RSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR 128
           RSLFW R+ YYISYGAL+ANRIPCPPRSGR YYTHNC+KARGPV+PY+RGCS ITRCRR
Sbjct: 75  RSLFWRRMRYYISYGALSANRIPCPPRSGRSYYTHNCFKARGPVHPYTRGCSRITRCRR 128

[Close]

BLAST of CmoCh20G011640 vs. NCBI nr
Match: gi|1012355649|gb|KYP66836.1| (hypothetical protein KK1_013147 [Cajanus cajan])

HSP 1 Score: 146.0 bits (367), Expect = 4.6e-32
Identity = 70/102 (68.63%), Postives = 83/102 (81.37%), Query Frame = 1


Query: 27  DTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQD-PRRSLFWSRVHYYISYGAL 86
           +T+L LM+DAL+WPTT+S+    +D D D D + +D+     RRSLFW R+ YYISYGAL
Sbjct: 3   ETTLNLMSDALDWPTTMSL----YDDDVDQDTEEEDVENGFSRRSLFWRRMKYYISYGAL 62

Query: 87  AANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR 128
           +ANRIPCPPRSGR YYTHNCYKARGPV+PYSRGCS ITRCRR
Sbjct: 63  SANRIPCPPRSGRSYYTHNCYKARGPVHPYSRGCSVITRCRR 100

[Close]

BLAST of CmoCh20G011640 vs. NCBI nr
Match: gi|951050181|ref|XP_014520136.1| (PREDICTED: protein RALF-like 34 [Vigna radiata var. radiata])

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-31
Identity = 81/132 (61.36%), Postives = 91/132 (68.94%), Query Frame = 1


Query: 1   MASKLLFPFFTILLLLLSAASAHLPV-----DTSLKLMADALEWPTTISIPDLDHDHDHD 60
           MAS L  P  T+ L L    + H  V     DT L LM+DAL+WPTT+S+ D     D D
Sbjct: 1   MASSL--PLLTLALFLCFLFTHHGGVHAQIDDTGLNLMSDALDWPTTMSLYD-----DLD 60

Query: 61  HDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPY 120
            D + D      RRSLFW R+ YYISYGAL+ANRIPCPPRSGR YYTHNCYKARGPV+PY
Sbjct: 61  EDEEEDVESGFSRRSLFWRRMKYYISYGALSANRIPCPPRSGRSYYTHNCYKARGPVHPY 120

Query: 121 SRGCSAITRCRR 128
           SRGCS ITRCRR
Sbjct: 121 SRGCSVITRCRR 125

The following BLAST results are available for this feature:

BLAST of CmoCh20G011640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RLF34_ARATH	4.9e-26	50.82	Protein RALF-like 34 OS=Arabidopsis thaliana GN=RALFL34 PE=2 SV=1	[more]
RLF23_ARATH	3.5e-08	65.31	Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1	[more]
RLF33_ARATH	4.6e-08	63.27	Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1	[more]
RALF_TOBAC	1.0e-07	64.58	Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1	[more]
RLF22_ARATH	1.7e-07	59.18	Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1	[more]

BLAST of CmoCh20G011640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMS2_CUCSA	1.6e-47	79.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G292820 PE=4 SV=1	[more]
A0A151TIM7_CAJCA	3.2e-32	68.63	Uncharacterized protein OS=Cajanus cajan GN=KK1_013147 PE=4 SV=1	[more]
I1LHE0_SOYBN	9.2e-32	63.33	Uncharacterized protein OS=Glycine max GN=GLYMA_11G055200 PE=4 SV=1	[more]
A0A0L9UR74_PHAAN	2.7e-31	68.32	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g032500 PE=4 SV=1	[more]
A0A0S3T4L8_PHAAN	2.7e-31	68.32	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G179100 PE=...	[more]

BLAST of CmoCh20G011640 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G67070.1	2.7e-27	50.82	ralf-like 34	[more]
AT3G16570.1	2.0e-09	65.31	rapid alkalinization factor 23	[more]
AT4G15800.1	2.6e-09	63.27	ralf-like 33	[more]
AT3G05490.1	9.8e-09	59.18	ralf-like 22	[more]
AT1G02900.1	3.5e-06	54.17	rapid alkalinization factor 1	[more]

BLAST of CmoCh20G011640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449460676\|ref\|XP_004148071.1\|	2.3e-47	79.69	PREDICTED: protein RALF-like 34 [Cucumis sativus]	[more]
gi\|659116040\|ref\|XP_008457868.1\|	5.0e-47	80.47	PREDICTED: protein RALF-like 34 [Cucumis melo]	[more]
gi\|1009144459\|ref\|XP_015889813.1\|	3.5e-32	67.23	PREDICTED: protein RALF-like 34 [Ziziphus jujuba]	[more]
gi\|1012355649\|gb\|KYP66836.1\|	4.6e-32	68.63	hypothetical protein KK1_013147 [Cajanus cajan]	[more]
gi\|951050181\|ref\|XP_014520136.1\|	1.0e-31	61.36	PREDICTED: protein RALF-like 34 [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007154	cell communication
biological_process	GO:0044700	single organism signaling
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0007267	cell-cell signaling
biological_process	GO:0006949	syncytium formation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005622	intracellular
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005179	hormone activity
molecular_function	GO:0004871	signal transducer activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G011640.1	CmoCh20G011640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 68..127 score: 4.4
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 1..127 score: 1.2
None	No IPR available	PANTHER	PTHR33136:SF7	PROTEIN RALF-LIKE 26-RELATED	coord: 1..127 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh20G011640	Cucsa.366420	Cucumber (Gy14) v1	cgycmoB1015
CmoCh20G011640	CmaCh20G011300	Cucurbita maxima (Rimu)	cmacmoB551
CmoCh20G011640	Csa2G292820	Cucumber (Chinese Long) v2	cmocuB532
CmoCh20G011640	MELO3C020932	Melon (DHL92) v3.5.1	cmomeB485
CmoCh20G011640	CSPI02G14730	Wild cucumber (PI 183967)	cmocpiB537
CmoCh20G011640	Lsi10G006340	Bottle gourd (USVL1VR-Ls)	cmolsiB492
CmoCh20G011640	Cp4.1LG16g00300	Cucurbita pepo (Zucchini)	cmocpeB517
CmoCh20G011640	MELO3C020932.2	Melon (DHL92) v3.6.1	cmomedB560
CmoCh20G011640	CsaV3_2G017290	Cucumber (Chinese Long) v3	cmocucB0638
CmoCh20G011640	Cla97C02G038920	Watermelon (97103) v2	cmowmbB558
CmoCh20G011640	Bhi10G001824	Wax gourd	cmowgoB0689
CmoCh20G011640	CsGy2G014760	Cucumber (Gy14) v2	cgybcmoB210
CmoCh20G011640	Carg20939	Silver-seed gourd	carcmoB1331

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh20G011640	Cucumber (Gy14) v2	cgybcmoB775
CmoCh20G011640	Silver-seed gourd	carcmoB1418
CmoCh20G011640	Silver-seed gourd	carcmoB1420
CmoCh20G011640	Cucumber (Chinese Long) v3	cmocucB0658
CmoCh20G011640	Cucurbita moschata (Rifu)	cmocmoB410
CmoCh20G011640	Cucurbita moschata (Rifu)	cmocmoB415
CmoCh20G011640	Cucumber (Gy14) v1	cgycmoB0223
CmoCh20G011640	Cucurbita maxima (Rimu)	cmacmoB612
CmoCh20G011640	Cucurbita maxima (Rimu)	cmacmoB617
CmoCh20G011640	Wild cucumber (PI 183967)	cmocpiB556
CmoCh20G011640	Cucumber (Chinese Long) v2	cmocuB550
CmoCh20G011640	Watermelon (Charleston Gray)	cmowcgB478
CmoCh20G011640	Watermelon (Charleston Gray)	cmowcgB491
CmoCh20G011640	Watermelon (97103) v1	cmowmB522
CmoCh20G011640	Cucurbita pepo (Zucchini)	cmocpeB510
CmoCh20G011640	Cucurbita pepo (Zucchini)	cmocpeB532