CmoCh20G008530 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh20G008530
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRer1 family protein
LocationCmo_Chr20 : 4290438 .. 4293973 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCTTTTCTCTCGTTCTCTTAAATGAAAGTGGAAGAAACAAAGAATATTACCAAAAATTTAGAAAATTAATATTGAAAAAATCAGAGTTCCACAAGACTCGCAGATCTGCTCGTTTTTCGCCTCCCTGGCTTCCGAATCTCCATTTTTCGTACTCATTGAGCTTCAAAGCTTACTCCAAGGTTCCAGATGTTCATTTTTGTTCTATAATTGCTTGTTTCCCTTTTCATAATGTTGATTTTCTGATGTGGGGTTTCATTAGATTTGTAATATTGCCTTTGTATGAGGATGAACTTCATTTTCTTAGCTTTTCTAGACGTTTTTCCGTTTCTTCTCTTGTTTGAATTGCTTTCCATTTAAGGTATTCCATTCTCTTTGGAAATTTCTTCTGATTTTCGATTTGTGGGGTGTGTTCGTTTCCGGATCTAATTAGTGTGGAACCCTAATGTTAGTTTGGTGAATCGAGGAGAATGGTATTTGTTGCTCTATGTTTTGATTATTGGGTCTAGAACTTGGTAAGTGTTCATTACATGCAGTTTTGTGGAAACCCTTTGAAGGTTTTTGCTTCCAGGATACGAACATTCAATGTATTGGGGTTCTTTTTTCTTGTTATCATTGTGTTCTGGGGATGAACAACATGAACAACATGAACAACATGAACAACATGAACAACATGGGTATTTTTTTTTGTGAATCTTATGGCAAATGTGGAAGAAGTTGAATAAGTTGTATGGCTCATATGCAGATAGTGAAGCGTTTAATATTCAATGGATGGGATAGGAGGTGAAACTGCCTCAGCGGCAGCACCCTTGAGCCAGTGGCAACATGATGTTTCAAGGCTTTATCAATATTATCTTGATAAGACTACCCCACATGCCGTCTACCGATGGATTGGAACTCTTTTTGTATTGGCAATTTATGCATTGAGGGTCTTCTATGTGCAAGGGTTCTACATTGTTTCATATGGTTTGGGTATCTATATACTCAATTTGTTGATTGGATTTTTGTCGCCTTTGGTTGATCCAGAGATGGAAGTTTCAGATGGACCATTGCTGCCTACTAAAGGTTCAGATGAATTCAAGCCGTTCATTCGCCGACTTCCCGAATTTAAGTTCTGGTAACTATGAATTTCATTCATGAGATTTTCGCATCGTTTGCTTGATTGTATTTGGCTGGTGAACTTTGAAGTTTGCTCTTCTGTTACTTCGTAGTTTCAAATCTGATTCTATCATGTCTAGTCTGGTACTGAAAGCTTGTTTAAACTTGGTTGACTTTATGGGGTGTGCAGAATTTGGTTATGTTGTGAATATGTAACAGCCTAGATATTGTCCTCTTCGGGCTTCCCTTCAAGGTTTTTAAAACGTTTCTACTAGGGAGAGGTTTCCACACCCTTATAAACAGTGCTTCGTTCCCCTCTCCAACCGATGTGAGACCCACAATCCACCCCCTTCGAGTCCCTGCGTCCTTGCTGACATTTGTTATCTCACAATCCACCCCCCTTCGGGGTCCAACGTCCTTGTTGACACATTGCCTGGTGTCCACCCCCTTTGAGGCTCATCGTCCTCGCTAGCACACCGCCCAATGTCTGGCTCTGATACCATTTGTAACAGTCAAAGCTCACCGCTAGCAGATATTGTCTTCTCTGAGCTTTTCCTTTTGGGCTTCCTTTCAAGGTTTTTAAAACGTGTCTGCCAGGGATTGGTTTCCACACCCTTATAAAGAATGCTTCGTTTCCCTTTCCAACCGGTTTGAGATCTCACAGAAAAAATTTGTGCGCATCAAGTAATCTTGTGTGTATTATCTCTTGTCCATCGTGACCACTACTCTTTGGTGCTTGATGATGGGCTTTGCTCGTTATGCATATGGCAATGTTGAGATCCTGAATCCACATGGTCAGCACTATTTTCTTGCACATGTCGCCGTTTACTTGCATAGTTATTGATATCTCAAGAATTAGGAGATCATTTGGAATGGAATAGGAAGAAGTATTTTCCTGTGTCTCAGTAATTGAAACAAGACAAGGAGATTACTTTATTGTTTGGAAGAAGACTATATATGATCGGTTCTCGTTGAAATTTTGATGGTCTTACAAGAACCTGGTCTCATTTAGCGTTATTATATCGTGTAGGTTAATACTTTCTTTTTACCTTTATCCCTTTCCCTTTTTAGTTTCGATTCCTTTCTTTTTCTTTCTACGTTGCTGGAGAAAGTTCCTTGACATTATAGATGTCACGGAGTATGACACTGATTCTAAAATATTAACCTGTTTGTTTGGTAACGATCTCGAATATTGCTTGGATGCTTCGTGAAGTAGACACGTTCACAAGATAAAAGCCACTCCATTTTTTTCACCATGAGAGAAAGGCCTTACTAAGCTTCTTCGAGTATTACCCGCTAGCAGAAAGACTTCCCTTGATCCCTTGAACTTTCTCCCTTTCTTATGTCAATTTGTTTGGAAGAGCTCGTCGCCAAAAAGGTGTGAAACGTGGGCAACCGTTTTTTTCTAATTTCTTATTTGTGGACTTTCTATACCGATGATATTCATTTTTGCCTCATAGTCGATTAATCGATACCGTTACAGCACGGTTTTACTTAGGTGTTCATGTAGTTCTTTTCTGTTATTCGAATTTGAATCTTCGATTAACCAGTACTTGCATTCTTTGGTGTCGAACTTCTTGTCTGCCCCCATAACACCTTCCCTCTTGGAAGCTATCATGATTTTGTTTATTCCTCATATAAATGTAAATTTGTGTTTGCAGGTACTCATTTACAAAGGCCTTTTGCATTGCCTTTGTAATGACCTTCTTTTCCATCTTTGATGTTCCTGTCTTCTGGCCCATTTTACTTTGTTACTGGATTGTTCTTTTTGTCCTGACAATGAGGCGTCAGATTGCACATATGATCAAGTACAAATACATACCATTTAGTCTTGGAAAGCAGGTGACTTATCAAATACTTCTAATACATCGTGACATTTACTAGCCTTTCATATTCTCCATCGTTTAGCTGCTCGGGCACTTTTTACAAGTTCTTCCTTTTTCCCTTTTCCATGCTCGTTCTCCCCTTTTTATACGATCAACGAAATTGTTTCTGATCGAAAAAGATGTTTTGCAGAAGTATGGTGGCAAAAAAGCTTCTGCAAGTAGCGGTATCTCGAACGACGATTGATTCATGGCTTATTATTTACAGCAATTAGTACAAGTAGAGATTTGGATGTTCACAGTAGAAGAAATTTTTTTGGATTGAAGTTACTTGTAGTTAAGATTGCTTATGGATTTATTGATTGGGACATGGTTATATGCCAAACCCTTTATGATAACTGAAGAACTGCCTGTTGTAGAAATTGTCACTTTAATACACGTCGTAATCTGGTTCGTAATCTGGTTCGGTTGCAGGGCGTATTTGAAACCTTTTACACTTTTATGTGGCTCTGCTGTGGACTGTTTAAGCTGGTAGTTGCAGTGTTTTTGTACAACTCCCCAATGAGATGTGGATTGGAACTGTGTGTGTGTGTTCTTAGATTGCTCTTGTTTTTGGT

mRNA sequence

ACCTTTTCTCTCGTTCTCTTAAATGAAAGTGGAAGAAACAAAGAATATTACCAAAAATTTAGAAAATTAATATTGAAAAAATCAGAGTTCCACAAGACTCGCAGATCTGCTCGTTTTTCGCCTCCCTGGCTTCCGAATCTCCATTTTTCGTACTCATTGAGCTTCAAAGCTTACTCCAAGATAGTGAAGCGTTTAATATTCAATGGATGGGATAGGAGGTGAAACTGCCTCAGCGGCAGCACCCTTGAGCCAGTGGCAACATGATGTTTCAAGGCTTTATCAATATTATCTTGATAAGACTACCCCACATGCCGTCTACCGATGGATTGGAACTCTTTTTGTATTGGCAATTTATGCATTGAGGGTCTTCTATGTGCAAGGGTTCTACATTGTTTCATATGGTTTGGGTATCTATATACTCAATTTGTTGATTGGATTTTTGTCGCCTTTGGTTGATCCAGAGATGGAAGTTTCAGATGGACCATTGCTGCCTACTAAAGGTTCAGATGAATTCAAGCCGTTCATTCGCCGACTTCCCGAATTTAAGTTCTGGTACTCATTTACAAAGGCCTTTTGCATTGCCTTTGTAATGACCTTCTTTTCCATCTTTGATGTTCCTGTCTTCTGGCCCATTTTACTTTGTTACTGGATTGTTCTTTTTGTCCTGACAATGAGGCGTCAGATTGCACATATGATCAAGTACAAATACATACCATTTAGTCTTGGAAAGCAGAAGTATGGTGGCAAAAAAGCTTCTGCAAGTAGCGGTATCTCGAACGACGATTGATTCATGGCTTATTATTTACAGCAATTAGTACAAGTAGAGATTTGGATGTTCACAGTAGAAGAAATTTTTTTGGATTGAAGTTACTTGTAGTTAAGATTGCTTATGGATTTATTGATTGGGACATGGTTATATGCCAAACCCTTTATGATAACTGAAGAACTGCCTGTTGTAGAAATTGTCACTTTAATACACGTCGTAATCTGGTTCGTAATCTGGTTCGGTTGCAGGGCGTATTTGAAACCTTTTACACTTTTATGTGGCTCTGCTGTGGACTGTTTAAGCTGGTAGTTGCAGTGTTTTTGTACAACTCCCCAATGAGATGTGGATTGGAACTGTGTGTGTGTGTTCTTAGATTGCTCTTGTTTTTGGT

Coding sequence (CDS)

ATGGATGGGATAGGAGGTGAAACTGCCTCAGCGGCAGCACCCTTGAGCCAGTGGCAACATGATGTTTCAAGGCTTTATCAATATTATCTTGATAAGACTACCCCACATGCCGTCTACCGATGGATTGGAACTCTTTTTGTATTGGCAATTTATGCATTGAGGGTCTTCTATGTGCAAGGGTTCTACATTGTTTCATATGGTTTGGGTATCTATATACTCAATTTGTTGATTGGATTTTTGTCGCCTTTGGTTGATCCAGAGATGGAAGTTTCAGATGGACCATTGCTGCCTACTAAAGGTTCAGATGAATTCAAGCCGTTCATTCGCCGACTTCCCGAATTTAAGTTCTGGTACTCATTTACAAAGGCCTTTTGCATTGCCTTTGTAATGACCTTCTTTTCCATCTTTGATGTTCCTGTCTTCTGGCCCATTTTACTTTGTTACTGGATTGTTCTTTTTGTCCTGACAATGAGGCGTCAGATTGCACATATGATCAAGTACAAATACATACCATTTAGTCTTGGAAAGCAGAAGTATGGTGGCAAAAAAGCTTCTGCAAGTAGCGGTATCTCGAACGACGATTGA
Homology
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BLAST of CmoCh20G008530 vs. Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=1 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.3e-81
Identity = 149/188 (79.26%), Postives = 165/188 (87.77%), Query Frame = 1 

Query: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60
           MD  GG++ S A P+ Q  H+  R+YQ+YLDKTTPHA YRWIGTL V  IY LRV+Y+QG
Sbjct: 1   MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEME-VSDGPLLPTKGSDEFKPFIRRLPEFKFWYS 120
           FYI++YGLGIY+LNLLIGFLSPLVDPE   VSDGP LPT+GSDEFKPFIRRLPEFKFWYS
Sbjct: 61  FYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYS 120

Query: 121 FTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKY 180
            TKAFCIAF+MTFFS+FDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFS GKQKY
Sbjct: 121 MTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKY 180

Query: 181 GGKKASAS 188
           GG+ +S S
Sbjct: 181 GGRSSSGS 188

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BLAST of CmoCh20G008530 vs. Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=1 SV=2)

HSP 1 Score: 303.1 bits (775), Expect = 2.1e-81
Identity = 145/189 (76.72%), Postives = 167/189 (88.36%), Query Frame = 1 

Query: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60
           M+G GG++ S A P+ +  H+  R+YQYYLDKTTPH+  RWIGTL    IY LRV+ + G
Sbjct: 1   MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EVSDG  LPT+GSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYG 180
           TKAFCIAF+MTFFS+FDVPVFWPILLCYW+VLFVLTMRRQIAHMIK+KYIPFS+GKQKY 
Sbjct: 121 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQKYS 180

Query: 181 GKKASASSG 190
           G+K+SA+SG
Sbjct: 181 GRKSSANSG 189

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BLAST of CmoCh20G008530 vs. Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 8.2e-57
Identity = 105/182 (57.69%), Postives = 140/182 (76.92%), Query Frame = 1 

Query: 7   ETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQGFYIVSY 66
           +++S A  +++  H  S+  Q+ LDKT PH +YRWI  L V+ IY +RV++V+GFYI++Y
Sbjct: 29  DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITY 88

Query: 67  GLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCI 126
            +GIY+LNL+I FLSP  DPE  ++ G  LPT+ SDE++PF+RRLPEFKFW S  +AF I
Sbjct: 89  AIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFII 148

Query: 127 AFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA 186
            F+MTFF +FDVPVFWPILL YW++LF LTMR+QI HMIKY+Y+PFS GK++YG K A  
Sbjct: 149 GFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKQYGKKPAPT 208

Query: 187 SS 189
            S
Sbjct: 209 ES 210

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BLAST of CmoCh20G008530 vs. Swiss-Prot
Match: RER1D_ARATH (Protein RER1D OS=Arabidopsis thaliana GN=At2g18240 PE=2 SV=2)

HSP 1 Score: 211.5 bits (537), Expect = 8.4e-54
Identity = 101/165 (61.21%), Postives = 127/165 (76.97%), Query Frame = 1 

Query: 12  AAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQGFYIVSYGLGIY 71
           A+PL++W+ + S+ +Q YLD++ P+ V RW+ TL    IY  RV+ V G++++SYGL  Y
Sbjct: 16  ASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGYFVISYGLATY 75

Query: 72  ILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMT 131
           ILNLLIGFLSP VDPE+E  D   LP   SDE+KPF+RRLPEFKFWY+ TKAF +AFVMT
Sbjct: 76  ILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAATKAFVVAFVMT 135

Query: 132 FFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGK 177
           FFS  DVPVFWPILLCYW+VL+ LTM+R I HM KY+Y PF + K
Sbjct: 136 FFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRK 180

[Close]
BLAST of CmoCh20G008530 vs. Swiss-Prot
Match: RER1_BOVIN (Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2)

HSP 1 Score: 196.4 bits (498), Expect = 2.8e-49
Identity = 99/184 (53.80%), Postives = 134/184 (72.83%), Query Frame = 1 

Query: 2   DGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQGF 61
           D +G       + + ++   + ++YQ +LDK+TPH   RW+ TL +  IY +RV+ +QG+
Sbjct: 5   DSVGDSVHGKPSVVYRFFTRLGQIYQSWLDKSTPHTAVRWVVTLGLSFIYMIRVYLLQGW 64

Query: 62  YIVSYGLGIYILNLLIGFLSPLVDPEM--EVSDGPLLPTKGSDEFKPFIRRLPEFKFWYS 121
           YIV+Y LGIY LNL I FLSP VDP +  +  DGP LPTK ++EF+PFIRRLPEFKFW++
Sbjct: 65  YIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHA 124

Query: 122 FTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKY 181
            TK   +A V TFF  F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKY+YIPF+ GK+ Y
Sbjct: 125 ATKGILVAMVCTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRTY 184

Query: 182 GGKK 184
            GK+
Sbjct: 185 KGKE 188

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BLAST of CmoCh20G008530 vs. TrEMBL
Match: A0A0A0LP91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G248640 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 6.6e-98
Identity = 179/194 (92.27%), Postives = 188/194 (96.91%), Query Frame = 1 

Query: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60
           MDGIGGE ASAA PLSQWQHDVSRLYQYYLDK TPHAVYRWIGTLF++AIYALRVFYVQG
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEF+PFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKY+PFS GKQK+G
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180

Query: 181 GKKASASSGISNDD 195
           GKK SASS +++DD
Sbjct: 181 GKKPSASSVVTSDD 194

[Close]
BLAST of CmoCh20G008530 vs. TrEMBL
Match: V4S7Z0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029324mg PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.1e-92
Identity = 168/194 (86.60%), Postives = 183/194 (94.33%), Query Frame = 1 

Query: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60
           M+GIGG+TASAA+P+SQW HD  RLYQYYLDKTTPHAVYRWIGTL ++AIY LRVFYVQG
Sbjct: 1   MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EV+DGPLLPTKGSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQIAHMIKY+YIPF++GKQKYG
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKYG 180

Query: 181 GKKASASSGISNDD 195
           GKK S+S G S  D
Sbjct: 181 GKKPSSSGGGSRGD 194

[Close]
BLAST of CmoCh20G008530 vs. TrEMBL
Match: V4SCI0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029324mg PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.0e-90
Identity = 167/194 (86.08%), Postives = 182/194 (93.81%), Query Frame = 1 

Query: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60
           M+GIGG+TASAA+P+SQW HD  RLYQYYLDKTTPHAVYRWIGTL ++AIY LRVFYVQG
Sbjct: 1   MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EV+DGPLLPTKGSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQIAHMIKY+YIPF++GKQ YG
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQ-YG 180

Query: 181 GKKASASSGISNDD 195
           GKK S+S G S  D
Sbjct: 181 GKKPSSSGGGSRGD 193

[Close]
BLAST of CmoCh20G008530 vs. TrEMBL
Match: A0A0D2R8A5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G029700 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.9e-89
Identity = 166/194 (85.57%), Postives = 176/194 (90.72%), Query Frame = 1 

Query: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60
           M+GIGG++AS A+PL QW HD  R+YQYYLDKTTPH  YRWIGTL V AIY LRV+YVQG
Sbjct: 1   MEGIGGDSASVASPLPQWGHDAWRIYQYYLDKTTPHTAYRWIGTLVVAAIYCLRVYYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIY+LNLLIGFLSPLVDPE+EV+DGPLLPTKGSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIVSYGLGIYLLNLLIGFLSPLVDPELEVTDGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFS GKQKY 
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKYT 180

Query: 181 GKKASASSGISNDD 195
           GKKAS SS  S  D
Sbjct: 181 GKKASPSSDGSRVD 194

[Close]
BLAST of CmoCh20G008530 vs. TrEMBL
Match: A0A061E6R9_THECC (Endoplasmatic reticulum retrieval protein 1B isoform 1 OS=Theobroma cacao GN=TCM_006859 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 4.3e-89
Identity = 164/194 (84.54%), Postives = 175/194 (90.21%), Query Frame = 1 

Query: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60
           M+GIGG+ AS A+PL QW HD  R+YQYYLDKTTPH  YRWIGT  + AIY LRV+YVQG
Sbjct: 1   MEGIGGDGASVASPLPQWGHDAWRMYQYYLDKTTPHTAYRWIGTFVIAAIYCLRVYYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIY+LNLLIGFLSPLVDPE+E SDGPLLPTKGSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIVSYGLGIYLLNLLIGFLSPLVDPEIEASDGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPF++GKQKY 
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFNIGKQKYT 180

Query: 181 GKKASASSGISNDD 195
           GKKASASS  S  D
Sbjct: 181 GKKASASSSGSRGD 194

[Close]
BLAST of CmoCh20G008530 vs. TAIR10
Match: AT4G39220.1 (AT4G39220.1 Rer1 family protein)

HSP 1 Score: 303.9 bits (777), Expect = 7.0e-83
Identity = 149/188 (79.26%), Postives = 165/188 (87.77%), Query Frame = 1 

Query: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60
           MD  GG++ S A P+ Q  H+  R+YQ+YLDKTTPHA YRWIGTL V  IY LRV+Y+QG
Sbjct: 1   MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEME-VSDGPLLPTKGSDEFKPFIRRLPEFKFWYS 120
           FYI++YGLGIY+LNLLIGFLSPLVDPE   VSDGP LPT+GSDEFKPFIRRLPEFKFWYS
Sbjct: 61  FYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYS 120

Query: 121 FTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKY 180
            TKAFCIAF+MTFFS+FDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFS GKQKY
Sbjct: 121 MTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKY 180

Query: 181 GGKKASAS 188
           GG+ +S S
Sbjct: 181 GGRSSSGS 188

[Close]
BLAST of CmoCh20G008530 vs. TAIR10
Match: AT2G21600.1 (AT2G21600.1 endoplasmatic reticulum retrieval protein 1B)

HSP 1 Score: 303.1 bits (775), Expect = 1.2e-82
Identity = 145/189 (76.72%), Postives = 167/189 (88.36%), Query Frame = 1 

Query: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60
           M+G GG++ S A P+ +  H+  R+YQYYLDKTTPH+  RWIGTL    IY LRV+ + G
Sbjct: 1   MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EVSDG  LPT+GSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYG 180
           TKAFCIAF+MTFFS+FDVPVFWPILLCYW+VLFVLTMRRQIAHMIK+KYIPFS+GKQKY 
Sbjct: 121 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQKYS 180

Query: 181 GKKASASSG 190
           G+K+SA+SG
Sbjct: 181 GRKSSANSG 189

[Close]
BLAST of CmoCh20G008530 vs. TAIR10
Match: AT2G23310.1 (AT2G23310.1 Rer1 family protein)

HSP 1 Score: 221.5 bits (563), Expect = 4.6e-58
Identity = 105/182 (57.69%), Postives = 140/182 (76.92%), Query Frame = 1 

Query: 7   ETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQGFYIVSY 66
           +++S A  +++  H  S+  Q+ LDKT PH +YRWI  L V+ IY +RV++V+GFYI++Y
Sbjct: 29  DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITY 88

Query: 67  GLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCI 126
            +GIY+LNL+I FLSP  DPE  ++ G  LPT+ SDE++PF+RRLPEFKFW S  +AF I
Sbjct: 89  AIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFII 148

Query: 127 AFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYGGKKASA 186
            F+MTFF +FDVPVFWPILL YW++LF LTMR+QI HMIKY+Y+PFS GK++YG K A  
Sbjct: 149 GFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKQYGKKPAPT 208

Query: 187 SS 189
            S
Sbjct: 209 ES 210

[Close]
BLAST of CmoCh20G008530 vs. TAIR10
Match: AT2G18240.1 (AT2G18240.1 Rer1 family protein)

HSP 1 Score: 211.5 bits (537), Expect = 4.8e-55
Identity = 101/165 (61.21%), Postives = 127/165 (76.97%), Query Frame = 1 

Query: 12  AAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQGFYIVSYGLGIY 71
           A+PL++W+ + S+ +Q YLD++ P+ V RW+ TL    IY  RV+ V G++++SYGL  Y
Sbjct: 16  ASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGYFVISYGLATY 75

Query: 72  ILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMT 131
           ILNLLIGFLSP VDPE+E  D   LP   SDE+KPF+RRLPEFKFWY+ TKAF +AFVMT
Sbjct: 76  ILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAATKAFVVAFVMT 135

Query: 132 FFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGK 177
           FFS  DVPVFWPILLCYW+VL+ LTM+R I HM KY+Y PF + K
Sbjct: 136 FFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRK 180

[Close]
BLAST of CmoCh20G008530 vs. NCBI nr
Match: gi|449462214|ref|XP_004148836.1| (PREDICTED: protein RER1A [Cucumis sativus])

HSP 1 Score: 364.8 bits (935), Expect = 9.5e-98
Identity = 179/194 (92.27%), Postives = 188/194 (96.91%), Query Frame = 1 

Query: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60
           MDGIGGE ASAA PLSQWQHDVSRLYQYYLDK TPHAVYRWIGTLF++AIYALRVFYVQG
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEF+PFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKY+PFS GKQK+G
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180

Query: 181 GKKASASSGISNDD 195
           GKK SASS +++DD
Sbjct: 181 GKKPSASSVVTSDD 194

[Close]
BLAST of CmoCh20G008530 vs. NCBI nr
Match: gi|659122058|ref|XP_008460948.1| (PREDICTED: protein RER1A isoform X1 [Cucumis melo])

HSP 1 Score: 358.6 bits (919), Expect = 6.8e-96
Identity = 179/194 (92.27%), Postives = 187/194 (96.39%), Query Frame = 1 

Query: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60
           MDGIGGE ASAA PLSQWQHDVSRLYQYYLDK TPHAVYRWIGTLF++AIYALRVFYVQG
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEF+PFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKY+PFS GKQK+G
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180

Query: 181 GKKASASSGISNDD 195
           GKK  ASS I++DD
Sbjct: 181 GKK-PASSVITSDD 193

[Close]
BLAST of CmoCh20G008530 vs. NCBI nr
Match: gi|659122062|ref|XP_008460950.1| (PREDICTED: protein RER1A isoform X2 [Cucumis melo])

HSP 1 Score: 352.4 bits (903), Expect = 4.9e-94
Identity = 178/194 (91.75%), Postives = 186/194 (95.88%), Query Frame = 1 

Query: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60
           MDGIGGE ASAA PLSQWQHDVSRLYQYYLDK TPHAVYRWIGTLF++AIYALRVFYVQG
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEF+PFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKY+PFS GKQ +G
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQ-HG 180

Query: 181 GKKASASSGISNDD 195
           GKK  ASS I++DD
Sbjct: 181 GKK-PASSVITSDD 192

[Close]
BLAST of CmoCh20G008530 vs. NCBI nr
Match: gi|567861324|ref|XP_006423316.1| (hypothetical protein CICLE_v10029324mg [Citrus clementina])

HSP 1 Score: 347.4 bits (890), Expect = 1.6e-92
Identity = 168/194 (86.60%), Postives = 183/194 (94.33%), Query Frame = 1 

Query: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60
           M+GIGG+TASAA+P+SQW HD  RLYQYYLDKTTPHAVYRWIGTL ++AIY LRVFYVQG
Sbjct: 1   MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EV+DGPLLPTKGSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQIAHMIKY+YIPF++GKQKYG
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKYG 180

Query: 181 GKKASASSGISNDD 195
           GKK S+S G S  D
Sbjct: 181 GKKPSSSGGGSRGD 194

[Close]
BLAST of CmoCh20G008530 vs. NCBI nr
Match: gi|567861322|ref|XP_006423315.1| (hypothetical protein CICLE_v10029324mg [Citrus clementina])

HSP 1 Score: 340.9 bits (873), Expect = 1.5e-90
Identity = 167/194 (86.08%), Postives = 182/194 (93.81%), Query Frame = 1 

Query: 1   MDGIGGETASAAAPLSQWQHDVSRLYQYYLDKTTPHAVYRWIGTLFVLAIYALRVFYVQG 60
           M+GIGG+TASAA+P+SQW HD  RLYQYYLDKTTPHAVYRWIGTL ++AIY LRVFYVQG
Sbjct: 1   MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EV+DGPLLPTKGSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQIAHMIKY+YIPF++GKQ YG
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQ-YG 180

Query: 181 GKKASASSGISNDD 195
           GKK S+S G S  D
Sbjct: 181 GKKPSSSGGGSRGD 193

The following BLAST results are available for this feature:
BLAST of CmoCh20G008530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RER1A_ARATH1.3e-8179.26Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=1 SV=1[more]
RER1B_ARATH2.1e-8176.72Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=1 SV=2[more]
RER1C_ARATH8.2e-5757.69Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1[more]
RER1D_ARATH8.4e-5461.21Protein RER1D OS=Arabidopsis thaliana GN=At2g18240 PE=2 SV=2[more]
RER1_BOVIN2.8e-4953.80Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2[more]
BLAST of CmoCh20G008530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LP91_CUCSA6.6e-9892.27Uncharacterized protein OS=Cucumis sativus GN=Csa_2G248640 PE=4 SV=1[more]
V4S7Z0_9ROSI1.1e-9286.60Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029324mg PE=4 SV=1[more]
V4SCI0_9ROSI1.0e-9086.08Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029324mg PE=4 SV=1[more]
A0A0D2R8A5_GOSRA1.9e-8985.57Uncharacterized protein OS=Gossypium raimondii GN=B456_008G029700 PE=4 SV=1[more]
A0A061E6R9_THECC4.3e-8984.54Endoplasmatic reticulum retrieval protein 1B isoform 1 OS=Theobroma cacao GN=TCM... [more]
BLAST of CmoCh20G008530 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G39220.17.0e-8379.26 Rer1 family protein[more]
AT2G21600.11.2e-8276.72 endoplasmatic reticulum retrieval protein 1B[more]
AT2G23310.14.6e-5857.69 Rer1 family protein[more]
AT2G18240.14.8e-5561.21 Rer1 family protein[more]
BLAST of CmoCh20G008530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449462214|ref|XP_004148836.1|9.5e-9892.27PREDICTED: protein RER1A [Cucumis sativus][more]
gi|659122058|ref|XP_008460948.1|6.8e-9692.27PREDICTED: protein RER1A isoform X1 [Cucumis melo][more]
gi|659122062|ref|XP_008460950.1|4.9e-9491.75PREDICTED: protein RER1A isoform X2 [Cucumis melo][more]
gi|567861324|ref|XP_006423316.1|1.6e-9286.60hypothetical protein CICLE_v10029324mg [Citrus clementina][more]
gi|567861322|ref|XP_006423315.1|1.5e-9086.08hypothetical protein CICLE_v10029324mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004932Rer1
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G008530.1CmoCh20G008530.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004932Retrieval of early ER protein Rer1PIRPIRSF016013AtER_Rer1pcoord: 1..190
score: 1.2
IPR004932Retrieval of early ER protein Rer1PANTHERPTHR10743PROTEIN RER1coord: 1..194
score: 2.9E
IPR004932Retrieval of early ER protein Rer1PFAMPF03248Rer1coord: 18..179
score: 3.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh20G008530Cucsa.109510Cucumber (Gy14) v1cgycmoB0252
CmoCh20G008530CmaCh20G008430Cucurbita maxima (Rimu)cmacmoB551
CmoCh20G008530CmaCh02G003900Cucurbita maxima (Rimu)cmacmoB606
CmoCh20G008530Cla016571Watermelon (97103) v1cmowmB534
CmoCh20G008530Csa2G248640Cucumber (Chinese Long) v2cmocuB531
CmoCh20G008530MELO3C023307Melon (DHL92) v3.5.1cmomeB495
CmoCh20G008530ClCG11G004290Watermelon (Charleston Gray)cmowcgB476
CmoCh20G008530CSPI02G12320Wild cucumber (PI 183967)cmocpiB536
CmoCh20G008530Lsi10G003800Bottle gourd (USVL1VR-Ls)cmolsiB491
CmoCh20G008530Cp4.1LG16g02540Cucurbita pepo (Zucchini)cmocpeB517
CmoCh20G008530Cp4.1LG05g12590Cucurbita pepo (Zucchini)cmocpeB534
CmoCh20G008530MELO3C023307.2Melon (DHL92) v3.6.1cmomedB568
CmoCh20G008530CsaV3_2G014850Cucumber (Chinese Long) v3cmocucB0637
CmoCh20G008530Cla97C11G211030Watermelon (97103) v2cmowmbB544
CmoCh20G008530Bhi10G001602Wax gourdcmowgoB0679
CmoCh20G008530CsGy2G012320Cucumber (Gy14) v2cgybcmoB209
CmoCh20G008530Carg26476Silver-seed gourdcarcmoB0636
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh20G008530CmoCh02G003970Cucurbita moschata (Rifu)cmocmoB404
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh20G008530Wax gourdcmowgoB0677
CmoCh20G008530Cucurbita moschata (Rifu)cmocmoB382
CmoCh20G008530Cucumber (Gy14) v1cgycmoB1038
CmoCh20G008530Wild cucumber (PI 183967)cmocpiB567
CmoCh20G008530Cucumber (Chinese Long) v2cmocuB561
CmoCh20G008530Melon (DHL92) v3.5.1cmomeB503
CmoCh20G008530Watermelon (Charleston Gray)cmowcgB485
CmoCh20G008530Watermelon (97103) v1cmowmB516
CmoCh20G008530Cucurbita pepo (Zucchini)cmocpeB514
CmoCh20G008530Cucurbita pepo (Zucchini)cmocpeB521
CmoCh20G008530Bottle gourd (USVL1VR-Ls)cmolsiB500
CmoCh20G008530Cucumber (Gy14) v2cgybcmoB940
CmoCh20G008530Melon (DHL92) v3.6.1cmomedB579
CmoCh20G008530Silver-seed gourdcarcmoB0434
CmoCh20G008530Cucumber (Chinese Long) v3cmocucB0674
CmoCh20G008530Watermelon (97103) v2cmowmbB550