CmoCh02G003970 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G003970
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Rer1 family protein
Location	Cmo_Chr02 : 2050793 .. 2053865 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAATATAAATATTAATATTGAAAAATCGAAGTCCCACGAGACTCGCAGATCTGCTCTTTCTTCGCCTCCTTACCTCCGAATCTCCATTTTTCGTGCTCCTTGAGCTTCAAATCTTACTCCAAGGTTAGACCCTGGTTGTTCGATTTCCATTAATCTTCTTTTTTCCCTGTTCTTCAATGTTGATTTTTTGATTTGGGGTTTTTTTAAAGATTTGTAATCTTGCCTTTGTTCGAGGATGAATTTGACTTTCTTAGCTTTTCTAGATGTGTTTCCATTTCTTCTCTTGTTTATCTTGCTTTGCATTTGAGGTATACTGTTTTTTTTTTTTTTTTTCCCTAAATTTCTTTTGATTGTCGATTTCTAGGGCGTGTTCATTTCGGATCTAATTGTGTGGAACCCTAATGGTATCTGTTGCTTTGTGTTTCAATTAATTGGTGGAATCCCTTTGAAGGTTGTTTTTTTGCTTCTAGGATCTCGAATGTTCAATGTATTGGGGTTATTTTCCCGTCATTTTCTAGAGCTTATCAACTTTCAACATGCATATTTTTATGGATTTTATACCAAAAGTGCAAGGAGTTGAATAATTTGTATGGGTCATATGCAGATATTGGAGGTTTTAATACTCAATGGACGGTATAGGAGGTGAAACTGCCTCAGCGGCAGCACCATTGAGTCAGTGGCAACATGATATTTCAAGGCTTTATCAATATTATCTGGATAAGACTACCCCACATGCTGTCTACAGATGGATTGGAACCCTTTTTGTAGTGGCAATTTATGCTTTGAGGGTCTTCTATATTCAAGGGTTCTACATTGTTTCATATGGTTTGGGTATCTATATACTCAATTTGTTGATTGGATTTTTGTCGCCCTTGGTTGACCCGGAGATGGAAGTTTCGGATGGACCTTTGCTGCCAACTAAAGGTTCAGATGAATTCAAGCCGTTCATTCGCCGACTTCCAGAGTTTAAATTTTGGTAACTAAGGAACTTCGATCACGAGCTTTGCATCACTTACCTGTTTGTATTTGGTTGGTAAACTTTGAAGCTTGCTTTTATGTAGTTTCGTCGTTTTAAATCCGATTTTCAGTATTTTGTATATCTATTGTGTCTAGTCTGGGACTGAAAACTTTTCTAATATTGGTTCCTTTGGTCAGGAAATGACACAGTGAGGTGTGCATTATTTGGTTTTCTGGTGAAAAAATCTGTGTGCATTTAGTAATCTTTGTTGATTGGGTTTGCTCTTTATGCATGTGGAATGTTTGACATCCCGACACGGTCATGCTTCTTTTTCTGGCACCGTCCTACAGCTTACTTACATAGTTCATAGCCCACGAATTAGGATGTAATGGAACAGGAAAATGCATTTTCCTTTGGGCTTAGTAATTTGAACTAGACAGGGAAAATATGGTTATCGTTTAGAAAAAGTTTGCCTACATATTTGTTGGTTCTCATTTAAATTTTGATAGTTTTCGAAGAATCTAGTCTCATTGGACCTTTTTAACTTTTATCCCTTTTTCTCTTTTTAGTTTCTGTTCCGTTCGTTTTCTTTCTACAAGCTTTCTCTCTGGATAAAGCTCCCGAACGTTATAGACGTCACTCAGGATGACAATGGTTCTAGAATTTTAACCTCTTTAATGGGTAATGCTCTCAAATATTGTGTAGGGGCTTTGTGAAGTAGACATATGAGATAATTGCTACTCCATTTTGCACCTTGAGGGGAAGGCCCTAATAAGCATCACCAGTTTACCCTTTAACCGAAAGACCTCCCTTGATCCTTGGAGCTTTCTCCCTTTCATTATGAATTTGTTTGGAAGAGCTCTACCAACCCTTTCAGATCATGCAAGGGTGTGACACTTGTGTTACTAATTATGCCAATTTCTTATTTGTGGAATTTGCTACGGACTTTAGAAATGTTTAATTTGCCTCATGGTTGATTGATAGTTATCGTTCCCGCAAAATCTTACTCGCGTGTTTATGCAGCTCTTTTTCTGTTATATTTCGATTCTTCATTGAGACAATTGAAAAAGATATTCGTTCTAATAGCTTAGCACACTCTTTGTTAATACTTTTGAATTTGAATGCTCCAAGTTTTTGTTCATTTCTCATAAAATGAAAATTTGTGTTTGTAGGTACTCTTTTACAAAGGCCTTTTGCATTGCCTTCGTAATGACCTTCTTTTCCATATTCGACGTGCCCGTCTTCTGGCCTATCTTACTTTGTTACTGGATTGTCCTTTTTGTGCTGACAATGAGGCGTCAGATTTCACACATGATCAAATACAAATACATTCCATTTAGTCTTGGAAAGCAGGTAACTCATGAATTACTTCTTATACATACCGTTTACGTTTGTCCGACCTTATAATGCCGTGATTTACATATGTAGTTAGAGTTGTTAGCCTTGTTCTTGACATGTCTTCTGCCAAGGAAACAAATATTCAAACAAAACATTTGATAATTTACAGAAGTACGGTGGGAAGAAACCTTCTGCAGGTAGCAGTATCTCCAACAACGATTGATTCATGGCTCCCTATTATTTACAGCAATTAGTACAAGTACTGAAGGGAGGAAGAAATTAGAGATTTGGATATTCATAGTAGCAGCAAATTTTTTCATTGAAGTTACTTGTAGTTAAGTTTGCATATGGATTTAAATCATTGATGGTATGATGCACAACACATGGCTATGCCAAATCCTTTATGATAACTGAAGAACTGCTGTTGTAGAAATTCCCAGTTTAATACCGGTTCGTTCGTTCTTCGCAGGATGCCATTTGAAATTTTCGTTTCCTGTTTTCGATTCCCCCTCCCACCCCCTTTTTTGCCCTTCTGTGGAAAATTTAAGCTGATTGTTGCAGTGTTCTTGTAGAATTCCCCAATCATATGTGGGTGGGAACTTTGTGTGATTATATTGATAATGATGTTGTTGAGAGTATTCATTCTGTATGAACAGAGTCATGACTGAAGGTGAAGGCATCAAAAAAAAGGTAACAAAATTCTTTAGAATTGTCTTTTCTTTGTAGATAATTACGTATGATGCACGATTTTGAACGAGAGAAAGAAGTGATATCC

mRNA sequence

AACAATATAAATATTAATATTGAAAAATCGAAGTCCCACGAGACTCGCAGATCTGCTCTTTCTTCGCCTCCTTACCTCCGAATCTCCATTTTTCGTGCTCCTTGAGCTTCAAATCTTACTCCAAGATATTGGAGGTTTTAATACTCAATGGACGGTATAGGAGGTGAAACTGCCTCAGCGGCAGCACCATTGAGTCAGTGGCAACATGATATTTCAAGGCTTTATCAATATTATCTGGATAAGACTACCCCACATGCTGTCTACAGATGGATTGGAACCCTTTTTGTAGTGGCAATTTATGCTTTGAGGGTCTTCTATATTCAAGGGTTCTACATTGTTTCATATGGTTTGGGTATCTATATACTCAATTTGTTGATTGGATTTTTGTCGCCCTTGGTTGACCCGGAGATGGAAGTTTCGGATGGACCTTTGCTGCCAACTAAAGGTTCAGATGAATTCAAGCCGTTCATTCGCCGACTTCCAGAGTTTAAATTTTGGTACTCTTTTACAAAGGCCTTTTGCATTGCCTTCGTAATGACCTTCTTTTCCATATTCGACGTGCCCGTCTTCTGGCCTATCTTACTTTGTTACTGGATTGTCCTTTTTGTGCTGACAATGAGGCGTCAGATTTCACACATGATCAAATACAAATACATTCCATTTAGTCTTGGAAAGCAGAAGTACGGTGGGAAGAAACCTTCTGCAGGTAGCAGTATCTCCAACAACGATTGATTCATGGCTCCCTATTATTTACAGCAATTAGTACAAGTACTGAAGGGAGGAAGAAATTAGAGATTTGGATATTCATAGTAGCAGCAAATTTTTTCATTGAAGTTACTTGTAGTTAAGTTTGCATATGGATTTAAATCATTGATGGTATGATGCACAACACATGGCTATGCCAAATCCTTTATGATAACTGAAGAACTGCTGTTGTAGAAATTCCCAGTTTAATACCGGTTCGTTCGTTCTTCGCAGGATGCCATTTGAAATTTTCGTTTCCTGTTTTCGATTCCCCCTCCCACCCCCTTTTTTGCCCTTCTGTGGAAAATTTAAGCTGATTGTTGCAGTGTTCTTGTAGAATTCCCCAATCATATGTGGGTGGGAACTTTGTGTGATTATATTGATAATGATGTTGTTGAGAGTATTCATTCTGTATGAACAGAGTCATGACTGAAGGTGAAGGCATCAAAAAAAAGGTAACAAAATTCTTTAGAATTGTCTTTTCTTTGTAGATAATTACGTATGATGCACGATTTTGAACGAGAGAAAGAAGTGATATCC

Coding sequence (CDS)

ATGGACGGTATAGGAGGTGAAACTGCCTCAGCGGCAGCACCATTGAGTCAGTGGCAACATGATATTTCAAGGCTTTATCAATATTATCTGGATAAGACTACCCCACATGCTGTCTACAGATGGATTGGAACCCTTTTTGTAGTGGCAATTTATGCTTTGAGGGTCTTCTATATTCAAGGGTTCTACATTGTTTCATATGGTTTGGGTATCTATATACTCAATTTGTTGATTGGATTTTTGTCGCCCTTGGTTGACCCGGAGATGGAAGTTTCGGATGGACCTTTGCTGCCAACTAAAGGTTCAGATGAATTCAAGCCGTTCATTCGCCGACTTCCAGAGTTTAAATTTTGGTACTCTTTTACAAAGGCCTTTTGCATTGCCTTCGTAATGACCTTCTTTTCCATATTCGACGTGCCCGTCTTCTGGCCTATCTTACTTTGTTACTGGATTGTCCTTTTTGTGCTGACAATGAGGCGTCAGATTTCACACATGATCAAATACAAATACATTCCATTTAGTCTTGGAAAGCAGAAGTACGGTGGGAAGAAACCTTCTGCAGGTAGCAGTATCTCCAACAACGATTGA

Homology

[Close]

BLAST of CmoCh02G003970 vs. Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=1 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.1e-80
Identity = 148/186 (79.57%), Postives = 163/186 (87.63%), Query Frame = 1


Query: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60
           MD  GG++ S A P+ Q  H+  R+YQ+YLDKTTPHA YRWIGTL V  IY LRV+YIQG
Sbjct: 1   MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEME-VSDGPLLPTKGSDEFKPFIRRLPEFKFWYS 120
           FYI++YGLGIY+LNLLIGFLSPLVDPE   VSDGP LPT+GSDEFKPFIRRLPEFKFWYS
Sbjct: 61  FYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYS 120

Query: 121 FTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKY 180
            TKAFCIAF+MTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKYIPFS GKQKY
Sbjct: 121 MTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKY 180

Query: 181 GGKKPS 186
           GG+  S
Sbjct: 181 GGRSSS 186

[Close]

BLAST of CmoCh02G003970 vs. Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=1 SV=2)

HSP 1 Score: 298.5 bits (763), Expect = 5.3e-80
Identity = 144/188 (76.60%), Postives = 164/188 (87.23%), Query Frame = 1


Query: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60
           M+G GG++ S A P+ +  H+  R+YQYYLDKTTPH+  RWIGTL    IY LRV+ I G
Sbjct: 1   MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EVSDG  LPT+GSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKYG 180
           TKAFCIAF+MTFFS+FDVPVFWPILLCYW+VLFVLTMRRQI+HMIK+KYIPFS+GKQKY 
Sbjct: 121 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQKYS 180

Query: 181 GKKPSAGS 189
           G+K SA S
Sbjct: 181 GRKSSANS 188

[Close]

BLAST of CmoCh02G003970 vs. Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 4.8e-57
Identity = 106/183 (57.92%), Postives = 142/183 (77.60%), Query Frame = 1


Query: 7   ETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQGFYIVSY 66
           +++S A  +++  H  S+  Q+ LDKT PH +YRWI  L VV IY +RV++++GFYI++Y
Sbjct: 29  DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITY 88

Query: 67  GLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCI 126
            +GIY+LNL+I FLSP  DPE  ++ G  LPT+ SDE++PF+RRLPEFKFW S  +AF I
Sbjct: 89  AIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFII 148

Query: 127 AFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKYGGKKPSA 186
            F+MTFF +FDVPVFWPILL YW++LF LTMR+QI HMIKY+Y+PFS GK++Y GKKP+ 
Sbjct: 149 GFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKQY-GKKPAP 208

Query: 187 GSS 190
             S
Sbjct: 209 TES 210

[Close]

BLAST of CmoCh02G003970 vs. Swiss-Prot
Match: RER1D_ARATH (Protein RER1D OS=Arabidopsis thaliana GN=At2g18240 PE=2 SV=2)

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-53
Identity = 100/165 (60.61%), Postives = 127/165 (76.97%), Query Frame = 1


Query: 12  AAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQGFYIVSYGLGIY 71
           A+PL++W+ + S+ +Q YLD++ P+ V RW+ TL    IY  RV+ + G++++SYGL  Y
Sbjct: 16  ASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGYFVISYGLATY 75

Query: 72  ILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMT 131
           ILNLLIGFLSP VDPE+E  D   LP   SDE+KPF+RRLPEFKFWY+ TKAF +AFVMT
Sbjct: 76  ILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAATKAFVVAFVMT 135

Query: 132 FFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGK 177
           FFS  DVPVFWPILLCYW+VL+ LTM+R I HM KY+Y PF + K
Sbjct: 136 FFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRK 180

[Close]

BLAST of CmoCh02G003970 vs. Swiss-Prot
Match: RER1_BOVIN (Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2)

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-49
Identity = 101/193 (52.33%), Postives = 139/193 (72.02%), Query Frame = 1


Query: 2   DGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQGF 61
           D +G       + + ++   + ++YQ +LDK+TPH   RW+ TL +  IY +RV+ +QG+
Sbjct: 5   DSVGDSVHGKPSVVYRFFTRLGQIYQSWLDKSTPHTAVRWVVTLGLSFIYMIRVYLLQGW 64

Query: 62  YIVSYGLGIYILNLLIGFLSPLVDPEM--EVSDGPLLPTKGSDEFKPFIRRLPEFKFWYS 121
           YIV+Y LGIY LNL I FLSP VDP +  +  DGP LPTK ++EF+PFIRRLPEFKFW++
Sbjct: 65  YIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHA 124

Query: 122 FTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKY 181
            TK   +A V TFF  F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKY+YIPF+ GK+ Y
Sbjct: 125 ATKGILVAMVCTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRTY 184

Query: 182 GGKKPSAGSSISN 193
            GK+  AG + ++
Sbjct: 185 KGKE-DAGKAFAS 196

[Close]

BLAST of CmoCh02G003970 vs. TrEMBL
Match: A0A0A0LP91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G248640 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.3e-98
Identity = 178/194 (91.75%), Postives = 188/194 (96.91%), Query Frame = 1


Query: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60
           MDGIGGE ASAA PLSQWQHD+SRLYQYYLDK TPHAVYRWIGTLF+VAIYALRVFY+QG
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEF+PFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKY+PFS GKQK+G
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180

Query: 181 GKKPSAGSSISNND 195
           GKKPSA S ++++D
Sbjct: 181 GKKPSASSVVTSDD 194

[Close]

BLAST of CmoCh02G003970 vs. TrEMBL
Match: V4S7Z0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029324mg PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 2.4e-92
Identity = 166/194 (85.57%), Postives = 182/194 (93.81%), Query Frame = 1


Query: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60
           M+GIGG+TASAA+P+SQW HD  RLYQYYLDKTTPHAVYRWIGTL +VAIY LRVFY+QG
Sbjct: 1   MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EV+DGPLLPTKGSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKY+YIPF++GKQKYG
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKYG 180

Query: 181 GKKPSAGSSISNND 195
           GKKPS+    S  D
Sbjct: 181 GKKPSSSGGGSRGD 194

[Close]

BLAST of CmoCh02G003970 vs. TrEMBL
Match: V4SCI0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029324mg PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 2.3e-90
Identity = 165/194 (85.05%), Postives = 181/194 (93.30%), Query Frame = 1


Query: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60
           M+GIGG+TASAA+P+SQW HD  RLYQYYLDKTTPHAVYRWIGTL +VAIY LRVFY+QG
Sbjct: 1   MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EV+DGPLLPTKGSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKY+YIPF++GKQ YG
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQ-YG 180

Query: 181 GKKPSAGSSISNND 195
           GKKPS+    S  D
Sbjct: 181 GKKPSSSGGGSRGD 193

[Close]

BLAST of CmoCh02G003970 vs. TrEMBL
Match: A0A061E6R9_THECC (Endoplasmatic reticulum retrieval protein 1B isoform 1 OS=Theobroma cacao GN=TCM_006859 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 3.7e-88
Identity = 161/194 (82.99%), Postives = 174/194 (89.69%), Query Frame = 1


Query: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60
           M+GIGG+ AS A+PL QW HD  R+YQYYLDKTTPH  YRWIGT  + AIY LRV+Y+QG
Sbjct: 1   MEGIGGDGASVASPLPQWGHDAWRMYQYYLDKTTPHTAYRWIGTFVIAAIYCLRVYYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIY+LNLLIGFLSPLVDPE+E SDGPLLPTKGSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIVSYGLGIYLLNLLIGFLSPLVDPEIEASDGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKYIPF++GKQKY 
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFNIGKQKYT 180

Query: 181 GKKPSAGSSISNND 195
           GKK SA SS S  D
Sbjct: 181 GKKASASSSGSRGD 194

[Close]

BLAST of CmoCh02G003970 vs. TrEMBL
Match: A0A0D2R8A5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G029700 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 4.8e-88
Identity = 162/194 (83.51%), Postives = 174/194 (89.69%), Query Frame = 1


Query: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60
           M+GIGG++AS A+PL QW HD  R+YQYYLDKTTPH  YRWIGTL V AIY LRV+Y+QG
Sbjct: 1   MEGIGGDSASVASPLPQWGHDAWRIYQYYLDKTTPHTAYRWIGTLVVAAIYCLRVYYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIY+LNLLIGFLSPLVDPE+EV+DGPLLPTKGSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIVSYGLGIYLLNLLIGFLSPLVDPELEVTDGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKYIPFS GKQKY 
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKYT 180

Query: 181 GKKPSAGSSISNND 195
           GKK S  S  S  D
Sbjct: 181 GKKASPSSDGSRVD 194

[Close]

BLAST of CmoCh02G003970 vs. TAIR10
Match: AT4G39220.1 (AT4G39220.1 Rer1 family protein)

HSP 1 Score: 300.8 bits (769), Expect = 6.0e-82
Identity = 148/186 (79.57%), Postives = 163/186 (87.63%), Query Frame = 1


Query: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60
           MD  GG++ S A P+ Q  H+  R+YQ+YLDKTTPHA YRWIGTL V  IY LRV+YIQG
Sbjct: 1   MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEME-VSDGPLLPTKGSDEFKPFIRRLPEFKFWYS 120
           FYI++YGLGIY+LNLLIGFLSPLVDPE   VSDGP LPT+GSDEFKPFIRRLPEFKFWYS
Sbjct: 61  FYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYS 120

Query: 121 FTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKY 180
            TKAFCIAF+MTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKYIPFS GKQKY
Sbjct: 121 MTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKY 180

Query: 181 GGKKPS 186
           GG+  S
Sbjct: 181 GGRSSS 186

[Close]

BLAST of CmoCh02G003970 vs. TAIR10
Match: AT2G21600.1 (AT2G21600.1 endoplasmatic reticulum retrieval protein 1B)

HSP 1 Score: 298.5 bits (763), Expect = 3.0e-81
Identity = 144/188 (76.60%), Postives = 164/188 (87.23%), Query Frame = 1


Query: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60
           M+G GG++ S A P+ +  H+  R+YQYYLDKTTPH+  RWIGTL    IY LRV+ I G
Sbjct: 1   MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EVSDG  LPT+GSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKYG 180
           TKAFCIAF+MTFFS+FDVPVFWPILLCYW+VLFVLTMRRQI+HMIK+KYIPFS+GKQKY 
Sbjct: 121 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQKYS 180

Query: 181 GKKPSAGS 189
           G+K SA S
Sbjct: 181 GRKSSANS 188

[Close]

BLAST of CmoCh02G003970 vs. TAIR10
Match: AT2G23310.1 (AT2G23310.1 Rer1 family protein)

HSP 1 Score: 222.2 bits (565), Expect = 2.7e-58
Identity = 106/183 (57.92%), Postives = 142/183 (77.60%), Query Frame = 1


Query: 7   ETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQGFYIVSY 66
           +++S A  +++  H  S+  Q+ LDKT PH +YRWI  L VV IY +RV++++GFYI++Y
Sbjct: 29  DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITY 88

Query: 67  GLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCI 126
            +GIY+LNL+I FLSP  DPE  ++ G  LPT+ SDE++PF+RRLPEFKFW S  +AF I
Sbjct: 89  AIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFII 148

Query: 127 AFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKYGGKKPSA 186
            F+MTFF +FDVPVFWPILL YW++LF LTMR+QI HMIKY+Y+PFS GK++Y GKKP+ 
Sbjct: 149 GFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKQY-GKKPAP 208

Query: 187 GSS 190
             S
Sbjct: 209 TES 210

[Close]

BLAST of CmoCh02G003970 vs. TAIR10
Match: AT2G18240.1 (AT2G18240.1 Rer1 family protein)

HSP 1 Score: 211.1 bits (536), Expect = 6.2e-55
Identity = 100/165 (60.61%), Postives = 127/165 (76.97%), Query Frame = 1


Query: 12  AAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQGFYIVSYGLGIY 71
           A+PL++W+ + S+ +Q YLD++ P+ V RW+ TL    IY  RV+ + G++++SYGL  Y
Sbjct: 16  ASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGYFVISYGLATY 75

Query: 72  ILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMT 131
           ILNLLIGFLSP VDPE+E  D   LP   SDE+KPF+RRLPEFKFWY+ TKAF +AFVMT
Sbjct: 76  ILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAATKAFVVAFVMT 135

Query: 132 FFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGK 177
           FFS  DVPVFWPILLCYW+VL+ LTM+R I HM KY+Y PF + K
Sbjct: 136 FFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRK 180

[Close]

BLAST of CmoCh02G003970 vs. NCBI nr
Match: gi|449462214|ref|XP_004148836.1| (PREDICTED: protein RER1A [Cucumis sativus])

HSP 1 Score: 366.3 bits (939), Expect = 3.3e-98
Identity = 178/194 (91.75%), Postives = 188/194 (96.91%), Query Frame = 1


Query: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60
           MDGIGGE ASAA PLSQWQHD+SRLYQYYLDK TPHAVYRWIGTLF+VAIYALRVFY+QG
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEF+PFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKY+PFS GKQK+G
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180

Query: 181 GKKPSAGSSISNND 195
           GKKPSA S ++++D
Sbjct: 181 GKKPSASSVVTSDD 194

[Close]

BLAST of CmoCh02G003970 vs. NCBI nr
Match: gi|659122058|ref|XP_008460948.1| (PREDICTED: protein RER1A isoform X1 [Cucumis melo])

HSP 1 Score: 360.5 bits (924), Expect = 1.8e-96
Identity = 178/194 (91.75%), Postives = 187/194 (96.39%), Query Frame = 1


Query: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60
           MDGIGGE ASAA PLSQWQHD+SRLYQYYLDK TPHAVYRWIGTLF+VAIYALRVFY+QG
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEF+PFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKY+PFS GKQK+G
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180

Query: 181 GKKPSAGSSISNND 195
           GKKP A S I+++D
Sbjct: 181 GKKP-ASSVITSDD 193

[Close]

BLAST of CmoCh02G003970 vs. NCBI nr
Match: gi|659122062|ref|XP_008460950.1| (PREDICTED: protein RER1A isoform X2 [Cucumis melo])

HSP 1 Score: 354.4 bits (908), Expect = 1.3e-94
Identity = 177/194 (91.24%), Postives = 186/194 (95.88%), Query Frame = 1


Query: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60
           MDGIGGE ASAA PLSQWQHD+SRLYQYYLDK TPHAVYRWIGTLF+VAIYALRVFY+QG
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEF+PFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKY+PFS GKQ +G
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQ-HG 180

Query: 181 GKKPSAGSSISNND 195
           GKKP A S I+++D
Sbjct: 181 GKKP-ASSVITSDD 192

[Close]

BLAST of CmoCh02G003970 vs. NCBI nr
Match: gi|567861324|ref|XP_006423316.1| (hypothetical protein CICLE_v10029324mg [Citrus clementina])

HSP 1 Score: 346.3 bits (887), Expect = 3.5e-92
Identity = 166/194 (85.57%), Postives = 182/194 (93.81%), Query Frame = 1


Query: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60
           M+GIGG+TASAA+P+SQW HD  RLYQYYLDKTTPHAVYRWIGTL +VAIY LRVFY+QG
Sbjct: 1   MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EV+DGPLLPTKGSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKY+YIPF++GKQKYG
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKYG 180

Query: 181 GKKPSAGSSISNND 195
           GKKPS+    S  D
Sbjct: 181 GKKPSSSGGGSRGD 194

[Close]

BLAST of CmoCh02G003970 vs. NCBI nr
Match: gi|567861322|ref|XP_006423315.1| (hypothetical protein CICLE_v10029324mg [Citrus clementina])

HSP 1 Score: 339.7 bits (870), Expect = 3.3e-90
Identity = 165/194 (85.05%), Postives = 181/194 (93.30%), Query Frame = 1


Query: 1   MDGIGGETASAAAPLSQWQHDISRLYQYYLDKTTPHAVYRWIGTLFVVAIYALRVFYIQG 60
           M+GIGG+TASAA+P+SQW HD  RLYQYYLDKTTPHAVYRWIGTL +VAIY LRVFY+QG
Sbjct: 1   MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EV+DGPLLPTKGSDEFKPFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYIPFSLGKQKYG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKY+YIPF++GKQ YG
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQ-YG 180

Query: 181 GKKPSAGSSISNND 195
           GKKPS+    S  D
Sbjct: 181 GKKPSSSGGGSRGD 193

The following BLAST results are available for this feature:

BLAST of CmoCh02G003970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RER1A_ARATH	1.1e-80	79.57	Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=1 SV=1	[more]
RER1B_ARATH	5.3e-80	76.60	Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=1 SV=2	[more]
RER1C_ARATH	4.8e-57	57.92	Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1	[more]
RER1D_ARATH	1.1e-53	60.61	Protein RER1D OS=Arabidopsis thaliana GN=At2g18240 PE=2 SV=2	[more]
RER1_BOVIN	1.6e-49	52.33	Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2	[more]

BLAST of CmoCh02G003970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LP91_CUCSA	2.3e-98	91.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G248640 PE=4 SV=1	[more]
V4S7Z0_9ROSI	2.4e-92	85.57	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029324mg PE=4 SV=1	[more]
V4SCI0_9ROSI	2.3e-90	85.05	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029324mg PE=4 SV=1	[more]
A0A061E6R9_THECC	3.7e-88	82.99	Endoplasmatic reticulum retrieval protein 1B isoform 1 OS=Theobroma cacao GN=TCM...	[more]
A0A0D2R8A5_GOSRA	4.8e-88	83.51	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G029700 PE=4 SV=1	[more]

BLAST of CmoCh02G003970 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39220.1	6.0e-82	79.57	Rer1 family protein	[more]
AT2G21600.1	3.0e-81	76.60	endoplasmatic reticulum retrieval protein 1B	[more]
AT2G23310.1	2.7e-58	57.92	Rer1 family protein	[more]
AT2G18240.1	6.2e-55	60.61	Rer1 family protein	[more]

BLAST of CmoCh02G003970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462214\|ref\|XP_004148836.1\|	3.3e-98	91.75	PREDICTED: protein RER1A [Cucumis sativus]	[more]
gi\|659122058\|ref\|XP_008460948.1\|	1.8e-96	91.75	PREDICTED: protein RER1A isoform X1 [Cucumis melo]	[more]
gi\|659122062\|ref\|XP_008460950.1\|	1.3e-94	91.24	PREDICTED: protein RER1A isoform X2 [Cucumis melo]	[more]
gi\|567861324\|ref\|XP_006423316.1\|	3.5e-92	85.57	hypothetical protein CICLE_v10029324mg [Citrus clementina]	[more]
gi\|567861322\|ref\|XP_006423315.1\|	3.3e-90	85.05	hypothetical protein CICLE_v10029324mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004932	Rer1

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G003970.1	CmoCh02G003970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004932	Retrieval of early ER protein Rer1	PIR	PIRSF016013	AtER_Rer1p	coord: 1..190 score: 2.2
IPR004932	Retrieval of early ER protein Rer1	PANTHER	PTHR10743	PROTEIN RER1	coord: 1..194 score: 1.2E
IPR004932	Retrieval of early ER protein Rer1	PFAM	PF03248	Rer1	coord: 18..179 score: 4.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G003970	Cucsa.109510	Cucumber (Gy14) v1	cgycmoB0253
CmoCh02G003970	CmaCh20G008430	Cucurbita maxima (Rimu)	cmacmoB554
CmoCh02G003970	CmaCh02G003900	Cucurbita maxima (Rimu)	cmacmoB619
CmoCh02G003970	Cla016571	Watermelon (97103) v1	cmowmB603
CmoCh02G003970	Csa2G248640	Cucumber (Chinese Long) v2	cmocuB577
CmoCh02G003970	MELO3C023307	Melon (DHL92) v3.5.1	cmomeB538
CmoCh02G003970	ClCG11G004290	Watermelon (Charleston Gray)	cmowcgB515
CmoCh02G003970	CSPI02G12320	Wild cucumber (PI 183967)	cmocpiB582
CmoCh02G003970	Lsi10G003800	Bottle gourd (USVL1VR-Ls)	cmolsiB533
CmoCh02G003970	Cp4.1LG16g02540	Cucurbita pepo (Zucchini)	cmocpeB575
CmoCh02G003970	Cp4.1LG05g12590	Cucurbita pepo (Zucchini)	cmocpeB595
CmoCh02G003970	MELO3C023307.2	Melon (DHL92) v3.6.1	cmomedB617
CmoCh02G003970	CsaV3_2G014850	Cucumber (Chinese Long) v3	cmocucB0687
CmoCh02G003970	Cla97C11G211030	Watermelon (97103) v2	cmowmbB587
CmoCh02G003970	Bhi10G001602	Wax gourd	cmowgoB0736
CmoCh02G003970	CsGy2G012320	Cucumber (Gy14) v2	cgybcmoB220
CmoCh02G003970	Carg26476	Silver-seed gourd	carcmoB0637

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh02G003970	CmoCh20G008530	Cucurbita moschata (Rifu)	cmocmoB404

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G003970	Silver-seed gourd	carcmoB0247
CmoCh02G003970	Silver-seed gourd	carcmoB0436
CmoCh02G003970	Cucumber (Chinese Long) v3	cmocucB0757
CmoCh02G003970	Watermelon (97103) v2	cmowmbB592
CmoCh02G003970	Wax gourd	cmowgoB0731
CmoCh02G003970	Cucurbita moschata (Rifu)	cmocmoB120
CmoCh02G003970	Cucurbita moschata (Rifu)	cmocmoB388
CmoCh02G003970	Cucumber (Gy14) v1	cgycmoB1039
CmoCh02G003970	Cucurbita maxima (Rimu)	cmacmoB153
CmoCh02G003970	Wild cucumber (PI 183967)	cmocpiB644
CmoCh02G003970	Cucumber (Chinese Long) v2	cmocuB633
CmoCh02G003970	Melon (DHL92) v3.5.1	cmomeB552
CmoCh02G003970	Watermelon (Charleston Gray)	cmowcgB530
CmoCh02G003970	Watermelon (97103) v1	cmowmB580
CmoCh02G003970	Cucurbita pepo (Zucchini)	cmocpeB566
CmoCh02G003970	Cucurbita pepo (Zucchini)	cmocpeB591
CmoCh02G003970	Bottle gourd (USVL1VR-Ls)	cmolsiB545
CmoCh02G003970	Cucumber (Gy14) v2	cgybcmoB944
CmoCh02G003970	Melon (DHL92) v3.6.1	cmomedB631