CSPI02G12320 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G12320
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRer1 family protein
LocationChr2 : 12571586 .. 12576646 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGAATTTTAAAATCACGGACCAATTATCTTCCGCTCGTGAATGGGTGACCCAATCTTTCAATGGTGTTCTTCTTCATCTTCAATTCCGTCACTGTTAACGTGTTAAGCCAATTTGTTTATTGCCTTCTCTATCGTTCTCTTAATTGGGTGTGGAACAAATCAACAAAGAATATTATTGTTAATTTAGAACAAATTAATATTGCAAAAATCAGAGTCCCACAAAACTCGTAGATCTGCTCGTTTTTCGCTTCCTTACCTTTCGAATCTCCATTTTTTCGTATTCGTTGAGCTTTCAAAGCTTCCTCCAAGGTAAGAGACTCGTTCCCTTTTTTTTTGCTTTTTCCTCATGATTCGTTTCTTTCCCCTTTTCCAATGTTGATTTTTTTTATGTTGGGTTTAATTAGATTTGTAAATCCTGCCTTTATCTGAGGATGAATTTCACTTTCTTAGCTTTTCTGGATGTTTTTCCGTTTCTTCTCTTGTTTGTATTGTTTTTCAATTAAGGGATGCTATTTTGTTTCCTGTGATTGTTGATTTGTGGGTTGTGTTAGTTTTTGGATCTAATTACTAAAAAAACGTTTTTGTGTAGAACCCTAACGATAGTTTGATTAATAGGGGAGAATGGTGTTTGTTGCTATGTTTTGATTAAATGAACTAGGCCTTGGAAAGTGTTCATCGCATGCAATTTGGTGGAAACCCCTTGCCCTTGAAGGTTTTTGCTTCCAGGATCCCGAACATTCAATGTATTGGGGATCTTTTTATAACATAATTTTTTTAGGGATAATCAATATGCATATTTTTTGTGAATGTTATGCAAAATGTGCAAGAAGTTGAATAACTTGTATGGATTGGGTTATATGCAGATAGTGAAGCTTTTAATTCTCAATGGACGGGATAGGAGGTGAAGCTGCCTCAGCGGCAGGACCTTTGAGCCAGTGGCAGCATGATGTTTCAAGGCTTTATCAATATTATCTGGATAAGATTACTCCACATGCTGTCTACAGATGGATTGGAACCCTTTTTATAGTGGCAATTTATGCTTTGAGGGTCTTCTATGTGCAAGGGTTCTACATTGTTTCTTATGGTCTGGGTATTTATATACTCAATTTATTGATTGGATTCTTATCCCCCTTGGTTGACCCAGAGATGGAAGTTTCAGATGGGCCTTTGCTGCCTACTAAAGGTTCAGATGAATTCAGGCCATTCATTCGCCGACTTCCAGAATTTAAGTTCTGGTAACTATGGAATTTCATTCGTGAGCTTTTACATCGTTTGCCTTTTTATATTTGGTTGGTAAACTTTGAAGTTTGCATTTTCTGTTGTTTCTCAATTACAAATCTGATTCAGTATCCTGTTTGTCTATTATGTCTAATTCTGGTACTGAAAACTTGTCTAAGCTTGGTTGGCTTTGGAGGGGAAAATGGTAGGCAGCGGTGAGAGAGGGAACTTATATTGAGGTGTGCATAATTGGGTTATGTTATTTTGTGCAAAATCCTTTGTGCATCAAGTAACTTGTTTCTTTTTGTCTTGTTCATTGTGATCGCTACTCTTTCCTGTAAAAAAAAGACGTGACCGCTACTCTTTGGTGCTTCATGATGGGCTTTGCTCGTTATGCATATAGCAACATTGAGATCCTGAATCCACATGGTCAGCCTTATTTTTTTCTATATGCGACCAGTGAATTTACATAGTTGATATCTCAATAATTAGGATAATATGTAATGGAACAGGAAGAGGCAGTTTCCTGCGGCTCAGTTATTTAAGCAAGACAGGGAAAGATACAAGTGTTGTTTGGAAGAAGAATGTATATTATTGGTTTTCATTGAAATTTTGGATGGTTATAGAGGAACCTGGTCTCATTTAGTCTTACTATGTAGTGTAGGTTAATACTTTCTTTTTTCCTTTTATCCTTTTTCCCTTTTAGCTTCATTTCCTATCTTCTTTCTATGTTTATTTCTTGCTGTACAATGGTTCTAAATATTAACCTCTTTGTTAGGTAATCATCTCAAATGTGTGTGTGTGTATACATAATGTAAAATAACCACCTATAGAATAGCACCTAAGAATTGTTTTGAAAAGCCTTCAAAATCGAAGCCACAAAGAAACATGATATTTAAGAAGGGATAAAATCTTGCTAGGGACCCTCTCCACACCTCTAAATTCTATTCTTCCGCTCACTCCACACTGCCTACAAGATAGCAGACACACTCGGAAGCCATAGAAAGTGGCATTTCTCCCCATGGGGCAAGTTAAGAAGGGAATTCTTGAGCATCGCTCCAACATCTGTGTGCCGTGCAACCATAATGCAAAAAGTTTGAAACAAAGAATCGCAAACCAAGCTGACTAACTCACAACGACAAAGAATGTGCTCTGCTCTTCCTCAGCCTTGACAAAGAATGCAATAGAAAGGACCCATGAAGGAAGGCAACTTCCTCTTAAGTCGATCCATCATGTTAGCCTGGCCAAGAACTCCTCAAAAGGATCAGGTTCCAGATCCTCACATCTCTTCTCCCAAGTCTAGAAGGGTGACCCTAAAGTAAAGAAAGAAGAGCAGCCACCACCACCATTTCTCACGACAGAACCTGAAAGGAAAGGAAAAGGAAAAGGAAAAGGATCTCGCAGTCTCCCTAGAAAATCATCAACAAAATTGTTTTTTGGTAGCTAACAAAAGATACGGCTGAGGGAACAAAGAACAAAGAGGCCTCTCCTCCACTCAATGGTCTTCCCAAAAATAGGTATCTTTCCCTCTCCCCCACCACACAACGAACAAAATGAATAAATGAAGGGGGCTCTTTCAAAATAATCTTCCACAAGTTTCGATGATATCCATTTAACCCCCTTAGGCAGCCAATCAAAATAGTGGGGGTCGTGTTTACTAACCCTAATTCTTAAATTCCCAACTCTCCCTCCCCAACTGGTCTCTCAATGACCTCCCATCCTCCCATCTAATCAAATGCAACCCCTTCTGTTTTCCTTCTTTTCTATTGAAAATCACACATCAACTTCTCCAAGCTTTGACAAACCTTGCACGAGCTCTAAAAAGGGAGCAAAAAATAGATAGGGGCACTCAACACCGATCTAATTAAAGTAAGGTGTACACACTGCTTTGGAAAAGAAGTCCTGTTTCCAAGAGGCTAACTGACTTTGCACATTATCCACCATCGGATCCCAAATGCCATCGAACTTGGTTTACAACCAAGGGGCAAACCAAGGTAGGAAGAAGGAAGATTACCAACCTCACCCCCACCATCTTCGCCCACAATAATCTTCTCCTCTGTCACTATTGAGGCTCATAATGCTGAACTTGTCCACCTGTTAATCCTCAACCCAAACATCTTTTCAAAGAAGGCTAAATATGGTTCAAGATCAAAAACAATTCCTCCTTGCCAGAGTAGGAAAAAGCATATCATCAGTGAATTGAATATGAGAGAGGGCTACCTTATCATCCCTTACTTCAAAGGGCTCAGGGTTCTTCCCAACCACACTTTTTTGCCAAGAATTTTACAGAGAACGTCACCACTAAAAAGAACAAAAAGGGGGATAAAGGGTTTCCCTGCCTGAGACCTCTTGACCACCACTTTACTTTTAGGACTCCCATTACCGAGAAAAAAGTAACTCATATTTCTTAGACAACCGCACATCGATGTCCTCCACTTTACCCAAAACTCTTCTTCTCCAAATCATTATCAATAAATCCCAATCCACTTAATTGTAAGCTTTTTTCATAGTCAATCTTAAAAAGCACACTTTTCTTTCTAGCTCTATAATTTTCAATCAATTCATTAGCAATAAGGACTTGATCCAGATGTCTTGCCCAGAGGCATAATGGCGTTAACGCGTTTACAAGATAATATCTATTCCTTTTTGCACCTTAAGGGAGAGGCCTTCCTCTAAGTTTCTTCTAGTTTATACCGACGAACAGAAAGATTTCCTTGATTCTCTAAACTTTCTCCCTTTTTTGCATTAATTTTTTCTTTTGGAAGACCTCTGCCATCCCCTTCAGATCATGGAAGGGTGTGGAACATGTGTTACTGCTTTTTAAAATAATTTCTTATTGTGGAATTTTGTAAACTTCAGAAATATTTATTATTTGCCTCGTGGTTGATTAATGGATACTGTTAAGACACAGTTTTACTTGTGTGTTTATGGTAGTTCTCTTCTGTTATTAGATTTTTTGAATCTTCAATTGATTACTACTTTTGCACTCTTCGGAATTGACCTTCTTGCCTGACCCCATAACACATTTCCTTTCTGGAAGTTATTAAGTGTTTGTTTATTTCTCATAGAAAATGAAAATTTGTATTTGTAGGTACTCTTTTACAAAGGCCTTTTGCATTGCCTTTGTTATGACCTTCTTCTCCATATTTGATGTTCCCGTCTTCTGGCCTATTTTACTTTGTTACTGGATTGTCCTTTTTGTCCTGACAATGAGGCGTCAGATTTCTCATATGATCAAGTACAAATACCTACCGTTTAGTTTTGGGAAGCAGGTGACCTATCAAGTACTTCTTATCCATTACACTGCTGTTAAGAGTTTGTTATTCTTGCTTTTGATAAATCTTTCGTGTTGTGGAAACATTGTTTTAAGTTTTAATATTTTGCAGAAGCATGGTGGCAAGAAACCTTCTGCAAGTAGCGTTGTCACCAGCGATGATTGATCTGTGGCTTATTATTTACAGCAATTAGTACAAGTACTGAATTGAGGGAGAAATTTAGAGACTCGAATGTTCACAGTAGCAGAAAATTTTTTCCATTAAAATTACTTGTAGTTAAGATTGCATATGGATTTGATCATTGAATTGATGATGCACAGGACATGGTTATGCCAATTCCTTTATGATTAACTGAAGGACTGCTATTGTAGAAACTCAGTTTAATACACGTTGTAATCCTGTCCGATCGCAGAGCGTCATTTGAATTTTTTGTTTGTTTTTGATTCTCATCTTCCCATCCTTTCTTTTTCTGGCCCCTGCAGTTTTCTTGTAGAATATCCCAATCACATGTGGGTTGGAACTGTGTCTATTGATGATGATATTGAGAGTATTCCGTCTCCTAAGCC

mRNA sequence

ATGGACGGGATAGGAGGTGAAGCTGCCTCAGCGGCAGGACCTTTGAGCCAGTGGCAGCATGATGTTTCAAGGCTTTATCAATATTATCTGGATAAGATTACTCCACATGCTGTCTACAGATGGATTGGAACCCTTTTTATAGTGGCAATTTATGCTTTGAGGGTCTTCTATGTGCAAGGGTTCTACATTGTTTCTTATGGTCTGGGTATTTATATACTCAATTTATTGATTGGATTCTTATCCCCCTTGGTTGACCCAGAGATGGAAGTTTCAGATGGGCCTTTGCTGCCTACTAAAGGTTCAGATGAATTCAGGCCATTCATTCGCCGACTTCCAGAATTTAAGTTCTGGTACTCTTTTACAAAGGCCTTTTGCATTGCCTTTGTTATGACCTTCTTCTCCATATTTGATGTTCCCGTCTTCTGGCCTATTTTACTTTGTTACTGGATTGTCCTTTTTGTCCTGACAATGAGGCGTCAGATTTCTCATATGATCAAGTACAAATACCTACCGTTTAGTTTTGGGAAGCAGAAGCATGGTGGCAAGAAACCTTCTGCAAGTAGCGTTGTCACCAGCGATGATTGA

Coding sequence (CDS)

ATGGACGGGATAGGAGGTGAAGCTGCCTCAGCGGCAGGACCTTTGAGCCAGTGGCAGCATGATGTTTCAAGGCTTTATCAATATTATCTGGATAAGATTACTCCACATGCTGTCTACAGATGGATTGGAACCCTTTTTATAGTGGCAATTTATGCTTTGAGGGTCTTCTATGTGCAAGGGTTCTACATTGTTTCTTATGGTCTGGGTATTTATATACTCAATTTATTGATTGGATTCTTATCCCCCTTGGTTGACCCAGAGATGGAAGTTTCAGATGGGCCTTTGCTGCCTACTAAAGGTTCAGATGAATTCAGGCCATTCATTCGCCGACTTCCAGAATTTAAGTTCTGGTACTCTTTTACAAAGGCCTTTTGCATTGCCTTTGTTATGACCTTCTTCTCCATATTTGATGTTCCCGTCTTCTGGCCTATTTTACTTTGTTACTGGATTGTCCTTTTTGTCCTGACAATGAGGCGTCAGATTTCTCATATGATCAAGTACAAATACCTACCGTTTAGTTTTGGGAAGCAGAAGCATGGTGGCAAGAAACCTTCTGCAAGTAGCGTTGTCACCAGCGATGATTGA
Homology
[Close]
BLAST of CSPI02G12320 vs. Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=1 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 9.0e-80
Identity = 144/188 (76.60%), Postives = 164/188 (87.23%), Query Frame = 1 

Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60
           MD  GG++ S A P+ Q  H+  R+YQ+YLDK TPHA YRWIGTL +  IY LRV+Y+QG
Sbjct: 1   MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEME-VSDGPLLPTKGSDEFRPFIRRLPEFKFWYS 120
           FYI++YGLGIY+LNLLIGFLSPLVDPE   VSDGP LPT+GSDEF+PFIRRLPEFKFWYS
Sbjct: 61  FYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYS 120

Query: 121 FTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKH 180
            TKAFCIAF+MTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKY+PFSFGKQK+
Sbjct: 121 MTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKY 180

Query: 181 GGKKPSAS 188
           GG+  S S
Sbjct: 181 GGRSSSGS 188

[Close]
BLAST of CSPI02G12320 vs. Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=1 SV=2)

HSP 1 Score: 292.0 bits (746), Expect = 4.9e-78
Identity = 139/188 (73.94%), Postives = 163/188 (86.70%), Query Frame = 1 

Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60
           M+G GG++ S A P+ +  H+  R+YQYYLDK TPH+  RWIGTL    IY LRV+ + G
Sbjct: 1   MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EVSDG  LPT+GSDEF+PFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180
           TKAFCIAF+MTFFS+FDVPVFWPILLCYW+VLFVLTMRRQI+HMIK+KY+PFS GKQK+ 
Sbjct: 121 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQKYS 180

Query: 181 GKKPSASS 189
           G+K SA+S
Sbjct: 181 GRKSSANS 188

[Close]
BLAST of CSPI02G12320 vs. Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.1e-56
Identity = 105/179 (58.66%), Postives = 141/179 (78.77%), Query Frame = 1 

Query: 7   EAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQGFYIVSY 66
           +++S A  +++  H  S+  Q+ LDK  PH +YRWI  L +V IY +RV++V+GFYI++Y
Sbjct: 29  DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITY 88

Query: 67  GLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSFTKAFCI 126
            +GIY+LNL+I FLSP  DPE  ++ G  LPT+ SDE+RPF+RRLPEFKFW S  +AF I
Sbjct: 89  AIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFII 148

Query: 127 AFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHGGKKPS 186
            F+MTFF +FDVPVFWPILL YW++LF LTMR+QI HMIKY+Y+PFSFGK+++ GKKP+
Sbjct: 149 GFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKQY-GKKPA 206

[Close]
BLAST of CSPI02G12320 vs. Swiss-Prot
Match: RER1D_ARATH (Protein RER1D OS=Arabidopsis thaliana GN=At2g18240 PE=2 SV=2)

HSP 1 Score: 207.6 bits (527), Expect = 1.2e-52
Identity = 100/165 (60.61%), Postives = 124/165 (75.15%), Query Frame = 1 

Query: 12  AGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQGFYIVSYGLGIY 71
           A PL++W+ + S+ +Q YLD+  P+ V RW+ TL    IY  RV+ V G++++SYGL  Y
Sbjct: 16  ASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGYFVISYGLATY 75

Query: 72  ILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSFTKAFCIAFVMT 131
           ILNLLIGFLSP VDPE+E  D   LP   SDE++PF+RRLPEFKFWY+ TKAF +AFVMT
Sbjct: 76  ILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAATKAFVVAFVMT 135

Query: 132 FFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGK 177
           FFS  DVPVFWPILLCYW+VL+ LTM+R I HM KY+Y PF   K
Sbjct: 136 FFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRK 180

[Close]
BLAST of CSPI02G12320 vs. Swiss-Prot
Match: RER1_CAEEL (Protein RER1 homolog OS=Caenorhabditis elegans GN=rer-1 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.6e-50
Identity = 97/181 (53.59%), Postives = 130/181 (71.82%), Query Frame = 1 

Query: 13  GPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQGFYIVSYGLGIYI 72
           G  S++ H +   YQYYLD++TPH  +RW+  L  +  +A R+  +QGFYIV+Y +GIY 
Sbjct: 10  GVTSRFFHSLEVKYQYYLDRLTPHTAFRWVIALISLVFFASRIILLQGFYIVAYAVGIYY 69

Query: 73  LNLLIGFLSPLVDPEMEVSD---GPLLPTKGSDEFRPFIRRLPEFKFWYSFTKAFCIAFV 132
           LNL + FL+P +DP +E  D   GP+LP+K +DEFRPF+RRLPEFKFW+SF KA  IA  
Sbjct: 70  LNLFLLFLTPSIDPALEFEDEDDGPVLPSKTNDEFRPFMRRLPEFKFWHSFMKATLIAIT 129

Query: 133 MTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHGGKKPSASSV 191
            TFF  FDVPVFWPIL+ Y+ +L  LT++RQI HMIKY+Y+PF+ GK +  GK+ +   V
Sbjct: 130 CTFFEFFDVPVFWPILVMYFFILTFLTLKRQIMHMIKYRYIPFTVGKPRMAGKEDTGKVV 189

[Close]
BLAST of CSPI02G12320 vs. TrEMBL
Match: A0A0A0LP91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G248640 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.5e-105
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1 

Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60
           MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180

Query: 181 GKKPSASSVVTSDD 195
           GKKPSASSVVTSDD
Sbjct: 181 GKKPSASSVVTSDD 194

[Close]
BLAST of CSPI02G12320 vs. TrEMBL
Match: V4S7Z0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029324mg PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 5.1e-90
Identity = 162/187 (86.63%), Postives = 177/187 (94.65%), Query Frame = 1 

Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60
           M+GIGG+ ASAA P+SQW HD  RLYQYYLDK TPHAVYRWIGTL IVAIY LRVFYVQG
Sbjct: 1   MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EV+DGPLLPTKGSDEF+PFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKY+Y+PF+ GKQK+G
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKYG 180

Query: 181 GKKPSAS 188
           GKKPS+S
Sbjct: 181 GKKPSSS 187

[Close]
BLAST of CSPI02G12320 vs. TrEMBL
Match: V4SCI0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029324mg PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 3.7e-88
Identity = 161/187 (86.10%), Postives = 176/187 (94.12%), Query Frame = 1 

Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60
           M+GIGG+ ASAA P+SQW HD  RLYQYYLDK TPHAVYRWIGTL IVAIY LRVFYVQG
Sbjct: 1   MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EV+DGPLLPTKGSDEF+PFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKY+Y+PF+ GKQ +G
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQ-YG 180

Query: 181 GKKPSAS 188
           GKKPS+S
Sbjct: 181 GKKPSSS 186

[Close]
BLAST of CSPI02G12320 vs. TrEMBL
Match: A0A0D2R8A5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G029700 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 2.4e-87
Identity = 158/188 (84.04%), Postives = 172/188 (91.49%), Query Frame = 1 

Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60
           M+GIGG++AS A PL QW HD  R+YQYYLDK TPH  YRWIGTL + AIY LRV+YVQG
Sbjct: 1   MEGIGGDSASVASPLPQWGHDAWRIYQYYLDKTTPHTAYRWIGTLVVAAIYCLRVYYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIVSYGLGIY+LNLLIGFLSPLVDPE+EV+DGPLLPTKGSDEF+PFIRRLPEFKFWYS 
Sbjct: 61  FYIVSYGLGIYLLNLLIGFLSPLVDPELEVTDGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKY+PFSFGKQK+ 
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKYT 180

Query: 181 GKKPSASS 189
           GKK S SS
Sbjct: 181 GKKASPSS 188

[Close]
BLAST of CSPI02G12320 vs. TrEMBL
Match: A0A0B0MRY6_GOSAR (Protein RER1A-like protein OS=Gossypium arboreum GN=F383_27239 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 2.6e-86
Identity = 158/188 (84.04%), Postives = 170/188 (90.43%), Query Frame = 1 

Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60
           M+GIGG+ AS A P+ QW HD  R+YQYYLDK TPH  YRWIGTL IVAIY LRV+YVQG
Sbjct: 1   MEGIGGDGASVASPMPQWGHDSWRMYQYYLDKSTPHTTYRWIGTLVIVAIYCLRVYYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIV+YGLGIY+LNLLIGFLSPLVDPE+E SDGPLLPTKGSDEF+PFIRRLPEFKFWYS 
Sbjct: 61  FYIVAYGLGIYLLNLLIGFLSPLVDPELEGSDGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI HMIKYKY+PFS GKQK+ 
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIGHMIKYKYIPFSIGKQKYS 180

Query: 181 GKKPSASS 189
           GKK SASS
Sbjct: 181 GKKGSASS 188

[Close]
BLAST of CSPI02G12320 vs. TAIR10
Match: AT4G39220.1 (AT4G39220.1 Rer1 family protein)

HSP 1 Score: 297.7 bits (761), Expect = 5.1e-81
Identity = 144/188 (76.60%), Postives = 164/188 (87.23%), Query Frame = 1 

Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60
           MD  GG++ S A P+ Q  H+  R+YQ+YLDK TPHA YRWIGTL +  IY LRV+Y+QG
Sbjct: 1   MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEME-VSDGPLLPTKGSDEFRPFIRRLPEFKFWYS 120
           FYI++YGLGIY+LNLLIGFLSPLVDPE   VSDGP LPT+GSDEF+PFIRRLPEFKFWYS
Sbjct: 61  FYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYS 120

Query: 121 FTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKH 180
            TKAFCIAF+MTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKYKY+PFSFGKQK+
Sbjct: 121 MTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKY 180

Query: 181 GGKKPSAS 188
           GG+  S S
Sbjct: 181 GGRSSSGS 188

[Close]
BLAST of CSPI02G12320 vs. TAIR10
Match: AT2G21600.1 (AT2G21600.1 endoplasmatic reticulum retrieval protein 1B)

HSP 1 Score: 292.0 bits (746), Expect = 2.8e-79
Identity = 139/188 (73.94%), Postives = 163/188 (86.70%), Query Frame = 1 

Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60
           M+G GG++ S A P+ +  H+  R+YQYYLDK TPH+  RWIGTL    IY LRV+ + G
Sbjct: 1   MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EVSDG  LPT+GSDEF+PFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180
           TKAFCIAF+MTFFS+FDVPVFWPILLCYW+VLFVLTMRRQI+HMIK+KY+PFS GKQK+ 
Sbjct: 121 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQKYS 180

Query: 181 GKKPSASS 189
           G+K SA+S
Sbjct: 181 GRKSSANS 188

[Close]
BLAST of CSPI02G12320 vs. TAIR10
Match: AT2G23310.1 (AT2G23310.1 Rer1 family protein)

HSP 1 Score: 221.1 bits (562), Expect = 6.0e-58
Identity = 105/179 (58.66%), Postives = 141/179 (78.77%), Query Frame = 1 

Query: 7   EAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQGFYIVSY 66
           +++S A  +++  H  S+  Q+ LDK  PH +YRWI  L +V IY +RV++V+GFYI++Y
Sbjct: 29  DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITY 88

Query: 67  GLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSFTKAFCI 126
            +GIY+LNL+I FLSP  DPE  ++ G  LPT+ SDE+RPF+RRLPEFKFW S  +AF I
Sbjct: 89  AIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFII 148

Query: 127 AFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHGGKKPS 186
            F+MTFF +FDVPVFWPILL YW++LF LTMR+QI HMIKY+Y+PFSFGK+++ GKKP+
Sbjct: 149 GFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKQY-GKKPA 206

[Close]
BLAST of CSPI02G12320 vs. TAIR10
Match: AT2G18240.1 (AT2G18240.1 Rer1 family protein)

HSP 1 Score: 207.6 bits (527), Expect = 6.9e-54
Identity = 100/165 (60.61%), Postives = 124/165 (75.15%), Query Frame = 1 

Query: 12  AGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQGFYIVSYGLGIY 71
           A PL++W+ + S+ +Q YLD+  P+ V RW+ TL    IY  RV+ V G++++SYGL  Y
Sbjct: 16  ASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGYFVISYGLATY 75

Query: 72  ILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSFTKAFCIAFVMT 131
           ILNLLIGFLSP VDPE+E  D   LP   SDE++PF+RRLPEFKFWY+ TKAF +AFVMT
Sbjct: 76  ILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAATKAFVVAFVMT 135

Query: 132 FFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGK 177
           FFS  DVPVFWPILLCYW+VL+ LTM+R I HM KY+Y PF   K
Sbjct: 136 FFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRK 180

[Close]
BLAST of CSPI02G12320 vs. NCBI nr
Match: gi|449462214|ref|XP_004148836.1| (PREDICTED: protein RER1A [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 2.1e-105
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1 

Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60
           MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180

Query: 181 GKKPSASSVVTSDD 195
           GKKPSASSVVTSDD
Sbjct: 181 GKKPSASSVVTSDD 194

[Close]
BLAST of CSPI02G12320 vs. NCBI nr
Match: gi|659122058|ref|XP_008460948.1| (PREDICTED: protein RER1A isoform X1 [Cucumis melo])

HSP 1 Score: 383.6 bits (984), Expect = 2.0e-103
Identity = 192/194 (98.97%), Postives = 193/194 (99.48%), Query Frame = 1 

Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60
           MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180

Query: 181 GKKPSASSVVTSDD 195
           GKKP ASSV+TSDD
Sbjct: 181 GKKP-ASSVITSDD 193

[Close]
BLAST of CSPI02G12320 vs. NCBI nr
Match: gi|659122062|ref|XP_008460950.1| (PREDICTED: protein RER1A isoform X2 [Cucumis melo])

HSP 1 Score: 377.5 bits (968), Expect = 1.4e-101
Identity = 191/194 (98.45%), Postives = 192/194 (98.97%), Query Frame = 1 

Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60
           MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG
Sbjct: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180
           TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQ HG
Sbjct: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQ-HG 180

Query: 181 GKKPSASSVVTSDD 195
           GKKP ASSV+TSDD
Sbjct: 181 GKKP-ASSVITSDD 192

[Close]
BLAST of CSPI02G12320 vs. NCBI nr
Match: gi|567861324|ref|XP_006423316.1| (hypothetical protein CICLE_v10029324mg [Citrus clementina])

HSP 1 Score: 338.6 bits (867), Expect = 7.4e-90
Identity = 162/187 (86.63%), Postives = 177/187 (94.65%), Query Frame = 1 

Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60
           M+GIGG+ ASAA P+SQW HD  RLYQYYLDK TPHAVYRWIGTL IVAIY LRVFYVQG
Sbjct: 1   MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EV+DGPLLPTKGSDEF+PFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKY+Y+PF+ GKQK+G
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKYG 180

Query: 181 GKKPSAS 188
           GKKPS+S
Sbjct: 181 GKKPSSS 187

[Close]
BLAST of CSPI02G12320 vs. NCBI nr
Match: gi|567861322|ref|XP_006423315.1| (hypothetical protein CICLE_v10029324mg [Citrus clementina])

HSP 1 Score: 332.4 bits (851), Expect = 5.3e-88
Identity = 161/187 (86.10%), Postives = 176/187 (94.12%), Query Frame = 1 

Query: 1   MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQG 60
           M+GIGG+ ASAA P+SQW HD  RLYQYYLDK TPHAVYRWIGTL IVAIY LRVFYVQG
Sbjct: 1   MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQG 60

Query: 61  FYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSF 120
           FYI+SYGLGIY+LNLLIGFLSPLVDPE+EV+DGPLLPTKGSDEF+PFIRRLPEFKFWYS 
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHG 180
           TKAFCIAFVMTFFS+FDVPVFWPILLCYWIVLFVLTMRRQI+HMIKY+Y+PF+ GKQ +G
Sbjct: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQ-YG 180

Query: 181 GKKPSAS 188
           GKKPS+S
Sbjct: 181 GKKPSSS 186

The following BLAST results are available for this feature:
BLAST of CSPI02G12320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RER1A_ARATH9.0e-8076.60Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=1 SV=1[more]
RER1B_ARATH4.9e-7873.94Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=1 SV=2[more]
RER1C_ARATH1.1e-5658.66Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1[more]
RER1D_ARATH1.2e-5260.61Protein RER1D OS=Arabidopsis thaliana GN=At2g18240 PE=2 SV=2[more]
RER1_CAEEL2.6e-5053.59Protein RER1 homolog OS=Caenorhabditis elegans GN=rer-1 PE=3 SV=1[more]
BLAST of CSPI02G12320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LP91_CUCSA1.5e-105100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G248640 PE=4 SV=1[more]
V4S7Z0_9ROSI5.1e-9086.63Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029324mg PE=4 SV=1[more]
V4SCI0_9ROSI3.7e-8886.10Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029324mg PE=4 SV=1[more]
A0A0D2R8A5_GOSRA2.4e-8784.04Uncharacterized protein OS=Gossypium raimondii GN=B456_008G029700 PE=4 SV=1[more]
A0A0B0MRY6_GOSAR2.6e-8684.04Protein RER1A-like protein OS=Gossypium arboreum GN=F383_27239 PE=4 SV=1[more]
BLAST of CSPI02G12320 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G39220.15.1e-8176.60 Rer1 family protein[more]
AT2G21600.12.8e-7973.94 endoplasmatic reticulum retrieval protein 1B[more]
AT2G23310.16.0e-5858.66 Rer1 family protein[more]
AT2G18240.16.9e-5460.61 Rer1 family protein[more]
BLAST of CSPI02G12320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449462214|ref|XP_004148836.1|2.1e-105100.00PREDICTED: protein RER1A [Cucumis sativus][more]
gi|659122058|ref|XP_008460948.1|2.0e-10398.97PREDICTED: protein RER1A isoform X1 [Cucumis melo][more]
gi|659122062|ref|XP_008460950.1|1.4e-10198.45PREDICTED: protein RER1A isoform X2 [Cucumis melo][more]
gi|567861324|ref|XP_006423316.1|7.4e-9086.63hypothetical protein CICLE_v10029324mg [Citrus clementina][more]
gi|567861322|ref|XP_006423315.1|5.3e-8886.10hypothetical protein CICLE_v10029324mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004932Rer1
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G12320.1CSPI02G12320.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004932Retrieval of early ER protein Rer1PIRPIRSF016013AtER_Rer1pcoord: 1..190
score: 4.0
IPR004932Retrieval of early ER protein Rer1PANTHERPTHR10743PROTEIN RER1coord: 1..194
score: 1.3E
IPR004932Retrieval of early ER protein Rer1PFAMPF03248Rer1coord: 18..179
score: 9.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G12320Cla016571Watermelon (97103) v1cpiwmB157
CSPI02G12320Csa2G248640Cucumber (Chinese Long) v2cpicuB065
CSPI02G12320MELO3C023307Melon (DHL92) v3.5.1cpimeB090
CSPI02G12320ClCG11G004290Watermelon (Charleston Gray)cpiwcgB111
CSPI02G12320Lsi10G003800Bottle gourd (USVL1VR-Ls)cpilsiB091
CSPI02G12320MELO3C023307.2Melon (DHL92) v3.6.1cpimedB081
CSPI02G12320CsaV3_2G014850Cucumber (Chinese Long) v3cpicucB080
CSPI02G12320Cla97C11G211030Watermelon (97103) v2cpiwmbB112
CSPI02G12320Bhi10G001602Wax gourdcpiwgoB181
CSPI02G12320Cucsa.109510Cucumber (Gy14) v1cgycpiB134
CSPI02G12320CmaCh02G003900Cucurbita maxima (Rimu)cmacpiB593
CSPI02G12320CmaCh20G008430Cucurbita maxima (Rimu)cmacpiB547
CSPI02G12320CmoCh20G008530Cucurbita moschata (Rifu)cmocpiB536
CSPI02G12320CmoCh02G003970Cucurbita moschata (Rifu)cmocpiB582
CSPI02G12320Cp4.1LG05g12590Cucurbita pepo (Zucchini)cpecpiB706
CSPI02G12320Cp4.1LG16g02540Cucurbita pepo (Zucchini)cpecpiB269
CSPI02G12320CsGy2G012320Cucumber (Gy14) v2cgybcpiB056
CSPI02G12320Carg26476Silver-seed gourdcarcpiB0509
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G12320Melon (DHL92) v3.6.1cpimedB096
CSPI02G12320Cucumber (Gy14) v2cgybcpiB062
CSPI02G12320Cucumber (Gy14) v2cgybcpiB303
CSPI02G12320Silver-seed gourdcarcpiB0347
CSPI02G12320Cucumber (Chinese Long) v3cpicucB118
CSPI02G12320Watermelon (97103) v2cpiwmbB124
CSPI02G12320Wax gourdcpiwgoB146
CSPI02G12320Wild cucumber (PI 183967)cpicpiB065
CSPI02G12320Wild cucumber (PI 183967)cpicpiB089
CSPI02G12320Cucumber (Gy14) v1cgycpiB503
CSPI02G12320Cucumber (Gy14) v1cgycpiB556
CSPI02G12320Cucurbita maxima (Rimu)cmacpiB441
CSPI02G12320Cucurbita moschata (Rifu)cmocpiB429
CSPI02G12320Cucurbita moschata (Rifu)cmocpiB500
CSPI02G12320Cucumber (Chinese Long) v2cpicuB094
CSPI02G12320Melon (DHL92) v3.5.1cpimeB102
CSPI02G12320Melon (DHL92) v3.5.1cpimeB123
CSPI02G12320Watermelon (Charleston Gray)cpiwcgB131
CSPI02G12320Watermelon (97103) v1cpiwmB150
CSPI02G12320Cucurbita pepo (Zucchini)cpecpiB236
CSPI02G12320Cucurbita pepo (Zucchini)cpecpiB542
CSPI02G12320Bottle gourd (USVL1VR-Ls)cpilsiB097